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FFCP PHASE1:Mm9::chr9:114597969..114597983,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=235661
|EntrezGene=235661
|HGNC=
|HGNC=
|MCL_coexpression_id=2733
|TSSclassifier=NA
|UniProt=Q3TWG5,Q8R1Q8
|UniProt=Q3TWG5,Q8R1Q8
|association_with_transcript=20bp_to_NM_146229,uc009rxx.1,uc009rxy.1_5end
|association_with_transcript=20bp_to_NM_146229,uc009rxx.1,uc009rxy.1_5end
|cluster_id=chr9:114597969..114597983,+
|description=CAGE_peak_3_at_Dync1li1_5end
|description=CAGE_peak_3_at_Dync1li1_5end
|id=chr9:114597969..114597983,+
|id=chr9:114597969..114597983,+
|ontology_enrichment_celltype=CL:0000117!2.15e-08!23;CL:0000337!2.15e-08!23;CL:0000540!4.61e-08!33;CL:0000047!4.61e-08!33;CL:0000031!4.61e-08!33;CL:0000404!4.61e-08!33
|ontology_enrichment_celltype=CL:0000117!2.15e-08!23;CL:0000337!2.15e-08!23;CL:0000540!4.61e-08!33;CL:0000047!4.61e-08!33;CL:0000031!4.61e-08!33;CL:0000404!4.61e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.95e-08,23;CL:0000337,1.95e-08,23;CL:0000540,4.21e-08,33;CL:0000047,4.21e-08,33;CL:0000031,4.21e-08,33;CL:0000404,4.21e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!8.05e-13!75;UBERON:0001016!8.05e-13!75;UBERON:0004121!5.87e-12!102;UBERON:0000924!5.87e-12!102;UBERON:0006601!5.87e-12!102;UBERON:0001017!8.80e-12!73;UBERON:0005743!8.80e-12!73;UBERON:0001049!1.19e-10!52;UBERON:0005068!1.19e-10!52;UBERON:0006241!1.19e-10!52;UBERON:0007135!1.19e-10!52;UBERON:0000033!2.65e-10!63;UBERON:0002346!8.86e-10!71;UBERON:0003075!8.86e-10!71;UBERON:0007284!8.86e-10!71;UBERON:0002020!9.06e-10!34;UBERON:0002616!5.79e-09!49;UBERON:0000955!7.59e-09!50;UBERON:0006238!7.59e-09!50;UBERON:0003056!9.69e-09!49;UBERON:0003080!1.65e-07!40;UBERON:0002791!2.51e-07!29;UBERON:0003528!2.51e-07!29;UBERON:0001893!2.51e-07!29;UBERON:0002780!4.24e-07!39;UBERON:0001890!4.24e-07!39;UBERON:0006240!4.24e-07!39
|ontology_enrichment_uberon=UBERON:0000073!8.05e-13!75;UBERON:0001016!8.05e-13!75;UBERON:0004121!5.87e-12!102;UBERON:0000924!5.87e-12!102;UBERON:0006601!5.87e-12!102;UBERON:0001017!8.80e-12!73;UBERON:0005743!8.80e-12!73;UBERON:0001049!1.19e-10!52;UBERON:0005068!1.19e-10!52;UBERON:0006241!1.19e-10!52;UBERON:0007135!1.19e-10!52;UBERON:0000033!2.65e-10!63;UBERON:0002346!8.86e-10!71;UBERON:0003075!8.86e-10!71;UBERON:0007284!8.86e-10!71;UBERON:0002020!9.06e-10!34;UBERON:0002616!5.79e-09!49;UBERON:0000955!7.59e-09!50;UBERON:0006238!7.59e-09!50;UBERON:0003056!9.69e-09!49;UBERON:0003080!1.65e-07!40;UBERON:0002791!2.51e-07!29;UBERON:0003528!2.51e-07!29;UBERON:0001893!2.51e-07!29;UBERON:0002780!4.24e-07!39;UBERON:0001890!4.24e-07!39;UBERON:0006240!4.24e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.54e-14,92;UBERON:0004121,4.74e-14,95;UBERON:0000924,4.74e-14,95;UBERON:0006601,4.74e-14,95;UBERON:0001016,6.89e-13,75;UBERON:0010371,1.24e-12,73;UBERON:0002346,3.77e-12,64;UBERON:0003075,3.77e-12,64;UBERON:0007284,3.77e-12,64;UBERON:0001017,7.65e-12,73;UBERON:0000073,2.20e-11,54;UBERON:0001049,1.05e-10,52;UBERON:0005068,1.05e-10,52;UBERON:0006241,1.05e-10,52;UBERON:0007135,1.05e-10,52;UBERON:0002020,8.09e-10,34;UBERON:0003056,8.77e-09,49;UBERON:0002616,5.09e-08,46;UBERON:0000955,6.56e-08,47;UBERON:0006238,6.56e-08,47;UBERON:0003080,1.52e-07,40;UBERON:0003528,2.31e-07,29;UBERON:0002791,2.31e-07,29;UBERON:0001893,2.31e-07,29;UBERON:0002780,3.93e-07,39;UBERON:0001890,3.93e-07,39;UBERON:0006240,3.93e-07,39
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854195,2.72756403893609,2.87931536182433,2.20345454596048,1.86401793926078,0.56369293868419,0.598066184175915,1.98550188548517,0.972255941720238,1.03327858782185,1.35164900392623,1.5256441023948,0.781226309063701,1.57289016638566,2.41584120826006,1.15212002503146,0.316011120628178,1.21635129174099,1.02710957164827,0.649604114888975,1.07416017400489,0,0.360586348559907,0.590758108698309,0.706765149637033,0.685861259894999,0.403304740547362,0.487289403698762,0.384847366561318,0.935015217452552,2.0405734525369,2.21985953374065,3.13998498133165,2.85403847818933,0.772758376128762,2.43987218086537,1.64836461840539,4.07299920250225,4.01257683228291,5.64751842617067,5.52390283808612,4.58316410751517,5.67115501734169,4.7955776383945,4.5323633843382,7.42524750254986,3.15224842256954,3.62513927187364,5.69536342927002,2.90604573235695,1.59609949360412,2.21953687480374,1.45864030240976,3.14419743941973,3.49302666055027,2.00022055021454,2.06035057238894,3.20919209591815,1.51618327058278,2.02783439912192,2.64076877940507,3.37109426891577,1.72867911493147,3.0440798546475,4.28664322154766,3.36064545240081,2.31491064556446,2.47251540481984,2.35518272215036,2.05721551431249,2.48466128623072,1.43061713968393,3.0522747492789,2.82328141245992,2.70766745253365,2.92684756596436,2.10455769150274,4.34573164306758,2.24456908663095,3.55905054372522,3.05363895364247,1.22769312950907,2.16911577660352,2.12197272079256,2.24829520144151,2.57324769289949,3.22306581072447,4.3996316375834,1.32354851471709,1.85494268496337
|phase1_expression=5.92550734287738,17.4487703819681,19.1099680543605,11.7961042409664,15.5277676283368,6.88305014838748,5.60670337429262,0.129123323441576,4.36445038670167,1.63845168425395,0.171217968225505,0.398860794976682,0.342401459862411,0.262261207256992,0.666219523631325,0.809901069559304,0,0.473193248037357,0.274228867211478,0,2.97651515528744,0.794327609607082,1.30599894569468,3.19984845586813,5.96464130774642,10.3361753540704,9.90752591165872,6.89507944594845,5.89072600314759,8.31699428207772,5.98672378769323,1.90509202037889,0.61506478758457,0,2.59966457776147,1.66234645358492,2.85837098767317,2.51118978442145,0,2.61761871986899,0.588231488031014,1.36609096991689,0.971020706062307,1.1330713617802,0.608261587317087,0.917733760808408,1.56478268869608,1.09012578190223,1.97717564461025,2.13872888981712,1.1198913730029,2.87505128729943,0.671130424230945,0.725362142011344,0.672187598284928,2.05807548828758,1.71920063963254,0,7.08107613008592,4.23192783417626,6.33831403506179,0.338844532069132,0.889294796111139,1.3498495759221,0,1.4209602298922,1.49800055259202,1.15265491596466,1.97010263386108,2.29510095163874,3.57552434297349,7.14127461009509,9.49734726091938,3.42974237801871,3.25874601462004,3.67687514644008,4.40463523997555,6.38436690425939,3.99376986466233,6.06676923558892,7.13603620098795,6.25096044668112,3.90856198601933,5.06486349028512,3.66715794664344,4.41942878210502,7.11858403995515,7.26957838718672,9.46577416664801,7.02815508993105,3.18850937571846,0.860423876981386,2.03991400112325,0,0.649776417447669,1.79210754838934,1.82577746171277,1.36344258062446,0.519572009205738,0.70667914902068,3.23939865486365,1.28326477414318,5.09610479413291,21.3320010945999,3.24736561516821,1.01343946190039,2.02209778005913,2.05530983494308,1.29468941823586,1.33597925158342,2.60227990149204,0.304465478312141,2.30615497256059,1.3565037649736,1.64624189989987,1.38233250462643,1.97755974187499,1.87979163995885,0.884610551949874,1.29413479957927,0.441683036920787,1.93950101254089,0,4.39171195517321,5.02672096352292,2.29911349687732,2.27648736561249,2.99951365496704,2.54140454146129,5.99162557619291,1.83000241127451,5.6544458450789,4.51943232499919,6.39288643325826,5.61027720310812,6.16516799657479,1.73126918545538,1.11966273549084,0.505445516867349,3.36706969418358,2.34216797332867,1.83921683546778,3.60124259610698,2.26057226753573,5.44291993210623,4.74020765053944,5.99691037182265,3.88055056108524,1.72454394346274,1.51284864134255,1.40760899331159,2.19195732427575,1.66828349535359,0.696504333044333,0.823128545631774,0.995171334092466,3.51106593656617,3.3455227924913,3.12579849335152,4.97101854085205,2.81431271977315,4.50155153652537,3.31442629819294,3.34499193970586,4.01094493507183,3.25547522650571,5.09719462659276,7.47298191149885,5.75959474697182,5.25335885053105,6.24229833503089,6.14039947186396,3.73235195994786,5.63666958793561,2.73376933133365,7.61494131606705,4.62586296177317,4.7601101999438,1.2797295032114,1.16118335930219,2.83508414908605,2.21851877085677,2.89091456998331,2.85338439168839,8.54152310780121,3.62337700392824,4.52403375840485,3.97912944082302,3.70431765526328,5.39291645192533,2.80979464837102,5.17767310461355,2.0863469104839,1.71372768914593,6.76246414038483,2.8511185898344,1.35766741017338,3.64706263429657,2.21327879934901,3.24742325555125,5.65195420228949,3.70191491765402,1.77871576252289,1.66845105716094,0.786235980452812,0.224862112384854,0.608580364165509,2.17059443777175,0.50925170356284,1.72617682470486,1.78348749452539,0.823684239564244,1.43768206527355,1.11642284300551,1.24815069245824,1.01031551178845,0.538192240565737,2.41221760681684,1.10851914099963,1.70542270593436,2.60743962307241,1.52770577197669,1.17345124144251,0.670025029767263,1.6663054862021,4.29294025287157,2.36452716159286,3.5434350343804,0.956728611944923,0.983179888294428,1.55416483679306,2.02508682014116,0,1.63171705145613,2.45882136509518,2.48343071674259,3.85321415970701,9.96299336033727,1.3114795630134,4.03953483526997,3.15508219416257,4.29482618726302,1.72338718186239,1.67278158566786,1.33679204449436,2.54768877709949,3.23848561339915,4.09158201075837,3.16230222357219,2.24924921495265,1.13552068166615,1.24645922567079,1.46598263418218,1.64970122972535,7.96470830039777,1.21390318077491,1.51161778482376,2.45186603682668,2.36241514304618,3.3817866273832,4.65170927702798,1.81766864738753,2.49548164869305,1.58018378967908,6.32511651449993,3.09406629744561,1.36175842301515,2.16073312837572,1.29358683782755,1.50035924522115,2.48276327099183,4.45922044005176,2.96188237083818,3.95804433848979,3.98941903708308,2.33015277950202,1.7642271844397,2.80306630000516,3.06782410722221,2.77439454669517,2.14870219205646,2.46211349617592,2.62332752966866,5.19190845629427,0.170870880797853,1.44470807574256,0.925972636848558,0.753473828018764,0.27338845544205,0.915112692826091,1.5298058699447,1.6794174278839,1.24379976423981,1.90934123603023,1.26534397432454,0.813277868507395,2.37611749807963,2.29997125615916,1.9652630737156,2.29269388854195,2.72756403893609,2.87931536182433,2.20345454596048,1.86401793926078,0.56369293868419,0.598066184175915,1.98550188548517,0.972255941720238,1.03327858782185,1.35164900392623,1.5256441023948,0.781226309063701,1.57289016638566,2.41584120826006,1.15212002503146,0.316011120628178,1.21635129174099,1.02710957164827,0.649604114888975,1.07416017400489,0,0.360586348559907,0.590758108698309,0.706765149637033,0.685861259894999,0.403304740547362,0.487289403698762,0.384847366561318,0.935015217452552,2.0405734525369,2.21985953374065,3.13998498133165,2.85403847818933,0.772758376128762,2.43987218086537,1.64836461840539,4.07299920250225,4.01257683228291,5.64751842617067,5.52390283808612,4.58316410751517,5.67115501734169,4.7955776383945,4.5323633843382,7.42524750254986,3.15224842256954,3.62513927187364,5.69536342927002,2.90604573235695,1.59609949360412,2.21953687480374,1.45864030240976,3.14419743941973,3.49302666055027,2.00022055021454,2.06035057238894,3.20919209591815,1.51618327058278,2.02783439912192,2.64076877940507,3.37109426891577,1.72867911493147,3.0440798546475,4.28664322154766,3.36064545240081,2.31491064556446,2.47251540481984,2.35518272215036,2.05721551431249,2.48466128623072,1.43061713968393,3.0522747492789,2.82328141245992,2.70766745253365,2.92684756596436,2.10455769150274,4.34573164306758,2.24456908663095,3.55905054372522,3.05363895364247,1.22769312950907,2.16911577660352,2.12197272079256,2.24829520144151,2.57324769289949,3.22306581072447,4.3996316375834,1.32354851471709,1.85494268496337
|short_description=p3@Dync1li1
|short_description=p3@Dync1li1
}}
}}

Latest revision as of 07:05, 26 September 2015

Short description:p3@Dync1li1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Dync1li1_5end
Coexpression cluster:MCL_coexpression_mm9:2733
Association with transcript: 20bp_to_NM_146229, uc009rxx.1, uc009rxy.1_5end
EntrezGene:Dync1li1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Dync1li1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I517.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.80
CD326+ enterocyte, pool2.CNhs13197.11849-124I415.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I19.91
GP2+ M cell, pool3.CNhs13240.11847-124I26.90
Ileum epithelium, pool1.CNhs13199.10252-104B95.89
Ileum epithelium, pool2.CNhs13232.10253-104C18.32
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.06
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.07
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D99.47
Mouse Schwann, donor2.CNhs12573.11746-123F97.03
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.28
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F15.65
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C93.60
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C65.44
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G86.00
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C64.01
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G35.10
heart, neonate N00.CNhs11213.639-21E37.47
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G15.25
heart, neonate N16.CNhs11209.782-15G16.24
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D25.64
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G17.61
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G73.65
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F35.65
kidney, neonate N30.CNhs11203.1385-42H13.70
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C64.29
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A39.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H32.77
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A92.73
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.57
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.14
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.95e-0823
neuroblast (sensu Vertebrata)1.95e-0823
neuron4.21e-0833
neuronal stem cell4.21e-0833
neuroblast4.21e-0833
electrically signaling cell4.21e-0833

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest4.54e-1492
ectoderm-derived structure4.74e-1495
ectoderm4.74e-1495
presumptive ectoderm4.74e-1495
nervous system6.89e-1375
ecto-epithelium1.24e-1273
neurectoderm3.77e-1264
neural plate3.77e-1264
presumptive neural plate3.77e-1264
central nervous system7.65e-1273
regional part of nervous system2.20e-1154
neural tube1.05e-1052
neural rod1.05e-1052
future spinal cord1.05e-1052
neural keel1.05e-1052
gray matter8.09e-1034
pre-chordal neural plate8.77e-0949
regional part of brain5.09e-0846
brain6.56e-0847
future brain6.56e-0847
anterior neural tube1.52e-0740
brain grey matter2.31e-0729
regional part of telencephalon2.31e-0729
telencephalon2.31e-0729
regional part of forebrain3.93e-0739
forebrain3.93e-0739
future forebrain3.93e-0739
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