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FFCP PHASE1:Mm9::chr7:17199897..17199955,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=232906
|EntrezGene=232906
|HGNC=
|HGNC=
|MCL_coexpression_id=321
|TSSclassifier=NA
|UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8
|UniProt=Q91YM2,B2RTN5,Q3UVZ8,Q8CCL8
|association_with_transcript=386bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end
|association_with_transcript=386bp_to_ENSMUST00000075845,NM_172739,uc009fhw.1_5end
|cluster_id=chr7:17199897..17199955,-
|description=CAGE_peak_1_at_Grlf1_5end
|description=CAGE_peak_1_at_Grlf1_5end
|id=chr7:17199897..17199955,-
|id=chr7:17199897..17199955,-
|ontology_enrichment_celltype=CL:0000393!5.80e-17!39;CL:0000211!5.80e-17!39;CL:0000540!1.05e-15!33;CL:0000047!1.05e-15!33;CL:0000031!1.05e-15!33;CL:0000404!1.05e-15!33;CL:0000055!2.52e-15!50;CL:0000221!3.03e-14!44;CL:0000133!3.03e-14!44;CL:0002319!4.09e-14!43;CL:0000117!3.73e-11!23;CL:0000337!3.73e-11!23;CL:0002321!1.83e-08!70;CL:0000220!1.83e-08!70
|ontology_enrichment_celltype=CL:0000393!5.80e-17!39;CL:0000211!5.80e-17!39;CL:0000540!1.05e-15!33;CL:0000047!1.05e-15!33;CL:0000031!1.05e-15!33;CL:0000404!1.05e-15!33;CL:0000055!2.52e-15!50;CL:0000221!3.03e-14!44;CL:0000133!3.03e-14!44;CL:0002319!4.09e-14!43;CL:0000117!3.73e-11!23;CL:0000337!3.73e-11!23;CL:0002321!1.83e-08!70;CL:0000220!1.83e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000393,5.71e-17,39;CL:0000211,5.71e-17,39;CL:0000540,1.03e-15,33;CL:0000047,1.03e-15,33;CL:0000031,1.03e-15,33;CL:0000404,1.03e-15,33;CL:0000221,2.99e-14,44;CL:0000133,2.99e-14,44;CL:0002319,4.04e-14,43;CL:0000117,3.70e-11,23;CL:0000337,3.70e-11,23;CL:0002321,1.68e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.21e-21!73;UBERON:0005743!1.21e-21!73;UBERON:0000073!5.51e-21!75;UBERON:0001016!5.51e-21!75;UBERON:0004121!7.28e-18!102;UBERON:0000924!7.28e-18!102;UBERON:0006601!7.28e-18!102;UBERON:0002346!1.70e-16!71;UBERON:0003075!1.70e-16!71;UBERON:0007284!1.70e-16!71;UBERON:0000025!4.67e-15!114;UBERON:0001049!5.43e-15!52;UBERON:0005068!5.43e-15!52;UBERON:0006241!5.43e-15!52;UBERON:0007135!5.43e-15!52;UBERON:0002020!1.11e-13!34;UBERON:0003056!4.11e-13!49;UBERON:0004111!5.64e-13!122;UBERON:0000033!7.92e-13!63;UBERON:0000955!8.69e-13!50;UBERON:0006238!8.69e-13!50;UBERON:0002616!9.03e-13!49;UBERON:0002780!4.89e-12!39;UBERON:0001890!4.89e-12!39;UBERON:0006240!4.89e-12!39;UBERON:0003080!6.54e-12!40;UBERON:0002791!7.89e-11!29;UBERON:0003528!7.89e-11!29;UBERON:0001893!7.89e-11!29;UBERON:0000956!1.60e-09!21;UBERON:0001869!1.60e-09!21;UBERON:0000203!1.60e-09!21;UBERON:0000153!3.45e-08!94;UBERON:0002619!1.25e-07!17;UBERON:0000468!1.91e-07!333;UBERON:0007811!3.11e-07!86;UBERON:0000922!6.38e-07!328;UBERON:0000477!6.42e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.19e-21,73;UBERON:0001016,5.40e-21,75;UBERON:0010314,1.40e-19,92;UBERON:0004121,1.06e-18,95;UBERON:0000924,1.06e-18,95;UBERON:0006601,1.06e-18,95;UBERON:0002346,7.47e-18,64;UBERON:0003075,7.47e-18,64;UBERON:0007284,7.47e-18,64;UBERON:0000073,1.43e-15,54;UBERON:0010371,3.31e-15,73;UBERON:0000025,4.61e-15,114;UBERON:0001049,5.36e-15,52;UBERON:0005068,5.36e-15,52;UBERON:0006241,5.36e-15,52;UBERON:0007135,5.36e-15,52;UBERON:0002020,1.10e-13,34;UBERON:0003056,4.06e-13,49;UBERON:0004111,5.81e-13,122;UBERON:0000955,4.04e-12,47;UBERON:0006238,4.04e-12,47;UBERON:0002616,4.17e-12,46;UBERON:0002780,4.84e-12,39;UBERON:0001890,4.84e-12,39;UBERON:0006240,4.84e-12,39;UBERON:0003080,6.47e-12,40;UBERON:0003528,7.81e-11,29;UBERON:0002791,7.81e-11,29;UBERON:0001893,7.81e-11,29;UBERON:0000956,1.58e-09,21;UBERON:0001869,1.58e-09,21;UBERON:0000203,1.58e-09,21;UBERON:0000922,3.98e-08,320;UBERON:0002619,1.24e-07,17
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50576,12.7403037651965,10.5003641705786,13.432621641684,9.96841140395591,9.85800804624333,9.63512447845231,6.18670132111694,3.62376181239009,5.18454011264158,4.74016680942267,10.9471616256689,7.29247795870273,3.50786222040047,4.833720783022,4.17230845040656,4.08664528367894,2.36303243479324,4.74542314756294,3.27689268616499,4.83965688656834,4.97035191772737,2.69393156592922,3.3894301632655,3.17422537061296,12.8751852956958,8.34338866468124,15.4453847054952,6.18206700903009,8.07034644440082,7.69236821922513,6.21668299329291,3.51100472824754,20.8958181768315,20.714635642823,32.6550442660456,21.997207339992,18.4972280338073,12.0863023582352,17.550585006027,12.6089936902782,10.8754178156209,13.9795284172991,21.8991303402613,33.1190644922856,12.8050204315601,15.8019366094391,15.7209871970987,9.92754945630076,10.6678429344775,11.743998262617,12.194929964489,10.1078884705519,11.4065684950608,12.8265912142532,11.2369808963859,12.0367286521154,12.1188839496344,13.3362233559261,13.4425818096032,10.4170979050401,9.47797571847605,10.009526569139,10.9718160763333,12.4233064311536,11.4449371174714,11.1916740806893,11.0107975085937,13.2844934389932,11.7073902638574,10.7858581689516,11.81495790459,11.7839877048125,12.5753119211625,12.411564779321,10.2307760792422,11.1554525653896,11.1885834369062,13.739581786587,8.88940112092552,6.01638951335235,5.54736162999646,7.94129108830256,7.18790290423307
|phase1_expression=10.890121603126,2.44282785347553,4.09499315450582,0,0,3.18970616632591,2.10251376535973,4.39019299701359,10.4183654392233,9.83071010552373,1.54096171402954,2.55270908785077,2.39681021903688,1.74840804837995,1.66554880907831,0.809901069559304,0,2.05050407482854,1.37114433605739,0.42438965179803,8.33424243480484,2.78014663362479,1.82839852397255,3.03985603307473,2.75291137280604,5.16808767703518,3.4460959692726,3.66301095566011,0.190023419456374,0.504060259519861,2.21730510655305,0,0,0,0.577703239502549,1.66234645358492,1.42918549383658,0,0,0.523523743973798,0,0,0,14.3522372492158,15.9161782014638,12.4811791469943,17.2126095756569,8.06693078607652,10.9843091367236,25.0814569805826,13.8586557409109,8.62515386189829,1.34226084846189,2.90144856804538,2.68875039313971,12.3484529297255,15.4728057566929,15.4701627683233,20.4339625468194,28.0365219014177,25.9870875437533,17.6199156675949,14.2287167377782,0.899899717281399,1.97773272513395,0.7104801149461,5.09320187881288,9.22123932771731,24.4707485048007,27.0011876663381,27.9732198597338,21.4238238302853,23.6329338818226,35.1548593746918,39.3924885884951,30.3342199581307,15.4162233399144,12.5133591323484,14.2854075928306,22.0250100509424,25.6165402086747,25.0038417867245,9.21303896704557,10.6924895906019,11.7654650788144,24.7488011797881,28.3319644790215,22.5543329448614,5.14938114665652,10.2777321745228,7.24661221754194,9.46466264679525,2.719885334831,10.2543606411185,14.2950811838487,13.4408066129201,3.93244376368905,13.1231348385104,9.35229616570328,9.18682893726885,12.8167511996779,28.2318250311499,30.5766287647975,14.2213340630666,2.16491041011214,1.52015919285059,3.0331466700887,5.36664234679582,3.6251303710604,7.42210695324124,13.7053408145247,8.52503339273995,10.6083128737787,6.17962826265753,9.05433044944927,7.28866229712118,12.1125534189843,5.35017620603673,0,6.30890714794896,5.52103796150984,6.30337829075789,1.86391761218122,10.8328894894272,12.3573557019938,0.766371165625774,1.67741174308288,1.19980546198682,0.762421362438388,10.4853447583376,7.77751024791665,27.6439574648302,13.210648334613,14.3200656104985,12.8828587626927,17.6842976743856,7.73979165262404,4.60305791257344,1.51633655060205,3.36706969418358,17.3060189140396,15.8632452059096,17.6460887209242,14.6183673300644,13.2671173345089,15.6298738747517,13.6804517857204,8.53721123438752,23.9280472155455,25.15110866232,20.762232651346,16.6588756644957,8.34141747676794,8.70630416305416,10.2891068203972,17.5150154800274,0.702213187313235,0.772043721344145,0.852490498186778,11.5990432619881,13.6025114789036,10.2635375032778,12.7842157216014,11.6090896730968,14.9639099500757,17.672579801031,14.7550370769791,13.778310399326,19.9117418395311,14.1184019108022,15.159867385075,10.8187990694746,10.5384055339704,7.51555945058082,16.4026159880019,25.4174392576833,0,0.528901133327089,17.4896365438892,15.5598570146494,10.4382643670896,7.05892336181699,5.33707305227689,3.61428689613862,2.37264530772256,3.45867804920423,3.77002813200404,3.78017296878187,5.06906626509712,4.49409704327111,1.08069024937347,2.19055400579804,11.3800740571849,14.3953125888258,15.7790829942313,10.7935203758017,12.8008641530633,10.3801013437671,13.0899631847213,12.5468625782662,9.57692239832386,10.6121560972748,8.59712618552732,6.34011401721157,3.53806191203765,4.49724224769707,4.66578279193557,5.30589751455317,5.60176873919124,8.34318798607351,2.43202840162553,3.0201755450689,10.0637744569148,4.09355042435354,8.11297950097858,7.32478746046624,5.74071723270119,7.71909634181387,8.86815312799702,16.6752442358027,19.8817271259272,19.6904299499218,19.9486711045227,15.0755631697634,17.139142143793,14.6350235893349,15.9211495547253,14.8381342064679,17.8589340896386,8.68475567993411,12.0879487306127,6.50920763616802,0,0.54390568381871,2.45882136509518,3.86311444826625,9.63303539926752,15.1203075703942,9.50822683184717,3.28212205365685,18.9304931649754,21.0836921920185,20.2497993868831,24.6137861891129,18.4922899488387,23.2122755246843,21.0501564870945,20.4579100537918,26.0889933444706,11.5675673911851,15.329529202493,7.83488656135923,6.35259141478947,13.1976098378028,3.98235415019888,11.1679092631291,6.04647113929502,4.52652191414155,3.83892460745005,3.07435147943927,6.97756391554197,3.99887102425256,8.55593708123331,5.68866164284469,1.05418608574999,2.06271086496374,5.44703369206061,16.3855595568492,12.2890749593617,22.2910516432856,18.9754049997233,12.8425548673491,12.3411765451591,8.52501857520878,3.05073220482823,3.60114520468494,2.64634077665954,6.26567761177624,6.94297034792394,9.95163261314572,6.56547892017251,7.38634048852776,2.62332752966866,12.6089205367147,2.05045056957423,12.3832120777933,7.9633646768976,1.31857919903284,2.05041341581538,2.0590035588587,0.679913719975421,1.39951452323658,1.79659965945751,2.86401185404534,15.8167996790568,11.1825706919767,8.96444328820951,8.99079672862215,5.67742665740062,6.06889558731693,5.95104881222419,3.66458318777641,2.20345454596048,0.621339313086926,2.81846469342095,17.1944027950576,12.7403037651965,10.5003641705786,13.432621641684,9.96841140395591,9.85800804624333,9.63512447845231,6.18670132111694,3.62376181239009,5.18454011264158,4.74016680942267,10.9471616256689,7.29247795870273,3.50786222040047,4.833720783022,4.17230845040656,4.08664528367894,2.36303243479324,4.74542314756294,3.27689268616499,4.83965688656834,4.97035191772737,2.69393156592922,3.3894301632655,3.17422537061296,12.8751852956958,8.34338866468124,15.4453847054952,6.18206700903009,8.07034644440082,7.69236821922513,6.21668299329291,3.51100472824754,20.8958181768315,20.714635642823,32.6550442660456,21.997207339992,18.4972280338073,12.0863023582352,17.550585006027,12.6089936902782,10.8754178156209,13.9795284172991,21.8991303402613,33.1190644922856,12.8050204315601,15.8019366094391,15.7209871970987,9.92754945630076,10.6678429344775,11.743998262617,12.194929964489,10.1078884705519,11.4065684950608,12.8265912142532,11.2369808963859,12.0367286521154,12.1188839496344,13.3362233559261,13.4425818096032,10.4170979050401,9.47797571847605,10.009526569139,10.9718160763333,12.4233064311536,11.4449371174714,11.1916740806893,11.0107975085937,13.2844934389932,11.7073902638574,10.7858581689516,11.81495790459,11.7839877048125,12.5753119211625,12.411564779321,10.2307760792422,11.1554525653896,11.1885834369062,13.739581786587,8.88940112092552,6.01638951335235,5.54736162999646,7.94129108830256,7.18790290423307
|short_description=p1@Grlf1
|short_description=p1@Grlf1
}}
}}

Latest revision as of 07:07, 26 September 2015

Short description:p1@Grlf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grlf1_5end
Coexpression cluster:MCL_coexpression_mm9:321
Association with transcript: 386bp_to_ENSMUST00000075845, NM_172739, uc009fhw.1_5end
EntrezGene:Grlf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grlf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.66
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D915.92
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.86
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.35
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E115.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.47
Mouse Granule cells, donor1.CNhs12131.11713-123C320.43
Mouse Granule cells, donor2.CNhs12357.11731-123E328.04
Mouse Granule cells, donor3.CNhs12108.11636-122C725.99
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.62
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.47
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.97
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D235.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F239.39
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D630.33
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.62
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.75
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.33
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.55
Mouse Schwann, donor1.CNhs12507.11728-123D95.15
Mouse Schwann, donor2.CNhs12573.11746-123F910.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.44
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H128.23
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D77.42
adrenal gland, embryo E14.CNhs11038.406-44C513.71
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I110.61
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C19.05
adrenal gland, neonate N25.CNhs11223.1377-27I37.29
amnion, adult pregnant day17.5.CNhs10488.583-22A812.11
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F56.31
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B210.83
cerebellum, neonate N30.CNhs11135.1395-42I212.36
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A410.49
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F127.64
cortex, adult.CNhs10473.12-14D513.21
cortex, neonate N30.CNhs11107.1392-42F214.32
diencephalon, adult.CNhs10482.20-12F212.88
diencephalon, neonate N30.CNhs11201.1388-42B217.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.74
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.60
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C617.31
eyeball, embryo E14.CNhs10521.399-16E215.86
eyeball, embryo E15.CNhs10593.426-16C917.65
eyeball, embryo E17.CNhs11023.1261-18D414.62
eyeball, neonate N00.CNhs11207.633-15C613.27
eyeball, neonate N01.CNhs11140.1532-43E715.63
eyeball, neonate N02.CNhs11205.1551-44G813.68
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E223.93
forelimb, embryo E12.CNhs10600.359-14H225.15
forelimb, embryo E13.CNhs10589.384-1E220.76
forelimb, embryo E14.CNhs10577.413-26A816.66
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B510.29
gonad, embryo E13.CNhs11044.1564-45I617.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E911.60
heart, embryo E12.CNhs11015.353-12F513.60
heart, embryo E13.CNhs11013.376-3I910.26
heart, embryo E14.CNhs10597.403-26D412.78
heart, embryo E15.CNhs11017.431-16C811.61
heart, embryo E16.CNhs11021.457-17C614.96
heart, embryo E17.CNhs11025.479-18E517.67
heart, embryo E18.CNhs11030.1283-20G314.76
heart, neonate N00.CNhs11213.639-21E313.78
heart, neonate N03.CNhs11221.1349-25I219.91
heart, neonate N10.CNhs11118.749-24G114.12
heart, neonate N16.CNhs11209.782-15G115.16
heart, neonate N20.CNhs11127.821-26I610.82
heart, neonate N25.CNhs11196.1351-25D310.54
heart, neonate N30.CNhs11202.1390-42D27.52
hippocampus, adult.CNhs10478.13-16E816.40
hippocampus, neonate N00.CNhs11228.627-43G125.42
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I517.49
intestine, embryo E13.CNhs11010.381-16D515.56
intestine, embryo E15.CNhs10602.976-16D810.44
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D35.34
intestine, embryo E18.CNhs10526.1289-20F73.61
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I911.38
kidney, embryo E15.CNhs10997.434-16F814.40
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I210.79
kidney, embryo E18.CNhs11001.1288-20C712.80
kidney, neonate N00.CNhs11214.646-21G710.38
kidney, neonate N10.CNhs11206.758-6D513.09
kidney, neonate N20.CNhs11113.832-19I112.55
kidney, neonate N25.CNhs11122.1353-25F39.58
kidney, neonate N30.CNhs11203.1385-42H110.61
liver, adult pregnant day01.CNhs10466.508-5B28.60
liver, embryo E12.CNhs10601.355-15F86.34
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D74.67
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G48.34
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B98.11
liver, neonate N20.CNhs11220.823-25A37.32
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B18.87
lung, embryo E12.CNhs10522.354-16G216.68
lung, embryo E14.CNhs10604.404-26F819.88
lung, embryo E15.CNhs11020.432-17C519.69
lung, embryo E16.CNhs10998.458-17B619.95
lung, embryo E17.CNhs10605.480-44A615.08
lung, embryo E18.CNhs10583.1287-20I617.14
lung, neonate N00.CNhs11224.640-42C614.64
lung, neonate N06.CNhs11212.683-20E515.92
lung, neonate N07.CNhs11111.715-19A314.84
lung, neonate N10.CNhs11219.750-23E617.86
lung, neonate N20.CNhs11109.822-18A48.68
lung, neonate N25.CNhs11119.1359-25C712.09
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C29.63
medulla oblongata, neonate N30.CNhs11200.1396-42A315.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.51
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D724.61
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.49
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D923.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.09
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I715.33
ovary, embryo E18.CNhs11040.505-44H77.83
ovary, neonate N00.CNhs11217.1299-22I46.35
oviduct, adult pregnant day01.CNhs10500.988-6G613.20
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F411.17
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G96.98
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E616.39
pituitary gland, embryo E13.CNhs11009.370-44C712.29
pituitary gland, embryo E14.CNhs11037.398-44A522.29
pituitary gland, embryo E15.CNhs10592.427-16B918.98
pituitary gland, embryo E16.CNhs11036.449-43F612.84
pituitary gland, embryo E17.CNhs11039.1265-44F512.34
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C36.27
skin, neonate N00.CNhs11124.650-25G46.94
skin, neonate N03.CNhs11215.662-22H39.95
skin, neonate N06.CNhs11097.693-20I56.57
skin, neonate N10.CNhs11108.762-6C47.39
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C912.61
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C112.38
spleen, embryo E18.CNhs11011.1271-21F27.96
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E315.82
stomach, embryo E15.CNhs10603.1252-16G811.18
stomach, embryo E16.CNhs11022.459-17D48.96
stomach, embryo E17.CNhs11006.1035-18D58.99
stomach, embryo E18.CNhs10999.1286-20C65.68
stomach, neonate N03.CNhs11193.1340-24B86.07
stomach, neonate N07.CNhs11210.718-18A95.95
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F517.19
testis, embryo E15.CNhs11034.443-27C512.74
testis, embryo E16.CNhs11033.470-26G510.50
testis, embryo E17.CNhs11029.486-18I513.43
testis, embryo E18.CNhs11027.503-18G59.97
testis, neonate N00.CNhs11189.1300-22B79.86
testis, neonate N07.CNhs11222.726-26I49.64
testis, neonate N10.CNhs11204.763-44D96.19
testis, neonate N20.CNhs11110.839-18H33.62
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I410.95
thymus, embryo E15.CNhs11005.430-45I27.29
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F84.09
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E44.84
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G72.69
thymus, neonate N30.CNhs11132.1393-42G23.39
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.34
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.45
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F58.07
uterus, adult.CNhs10509.92-27E57.69
vagina, adult.CNhs10502.89-27D56.22
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A220.71
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.61
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.98
whole body, embryo E11.CNhs11014.324-5I821.90
whole body, embryo E12.CNhs10587.857-27C933.12
whole body, embryo E13.CNhs10512.372-23H212.81
whole body, embryo E14.5.CNhs10578.420-27D215.80
whole body, embryo E14.CNhs10519.395-14B115.72
whole body, embryo E16.CNhs10514.453-14F29.93
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.34
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.42
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.16
whole body, embryo E17.5.CNhs10513.490-9F911.19
whole body, embryo E17.CNhs10517.475-3I513.74
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B47.19





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell5.71e-1739
electrically active cell5.71e-1739
neuron1.03e-1533
neuronal stem cell1.03e-1533
neuroblast1.03e-1533
electrically signaling cell1.03e-1533
ectodermal cell2.99e-1444
neurectodermal cell2.99e-1444
neural cell4.04e-1443
CNS neuron (sensu Vertebrata)3.70e-1123
neuroblast (sensu Vertebrata)3.70e-1123
embryonic cell1.68e-0870

Uber anatomy
Ontology termp-valuen
central nervous system1.19e-2173
nervous system5.40e-2175
structure with developmental contribution from neural crest1.40e-1992
ectoderm-derived structure1.06e-1895
ectoderm1.06e-1895
presumptive ectoderm1.06e-1895
neurectoderm7.47e-1864
neural plate7.47e-1864
presumptive neural plate7.47e-1864
regional part of nervous system1.43e-1554
ecto-epithelium3.31e-1573
tube4.61e-15114
neural tube5.36e-1552
neural rod5.36e-1552
future spinal cord5.36e-1552
neural keel5.36e-1552
gray matter1.10e-1334
pre-chordal neural plate4.06e-1349
anatomical conduit5.81e-13122
brain4.04e-1247
future brain4.04e-1247
regional part of brain4.17e-1246
regional part of forebrain4.84e-1239
forebrain4.84e-1239
future forebrain4.84e-1239
anterior neural tube6.47e-1240
brain grey matter7.81e-1129
regional part of telencephalon7.81e-1129
telencephalon7.81e-1129
cerebral cortex1.58e-0921
cerebral hemisphere1.58e-0921
pallium1.58e-0921
embryo3.98e-08320
regional part of cerebral cortex1.24e-0717
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