Personal tools

FFCP PHASE1:Mm9::chr10:76496049..76496060,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20509
|EntrezGene=20509
|HGNC=
|HGNC=
|MCL_coexpression_id=68
|TSSclassifier=NA
|UniProt=D3Z4F3
|UniProt=D3Z4F3
|association_with_transcript=-3bp_to_ENSMUST00000132984_5end
|association_with_transcript=-3bp_to_ENSMUST00000132984_5end
|cluster_id=chr10:76496049..76496060,+
|description=CAGE_peak_4_at_Slc19a1_5end
|description=CAGE_peak_4_at_Slc19a1_5end
|id=chr10:76496049..76496060,+
|id=chr10:76496049..76496060,+
|ontology_enrichment_celltype=CL:0000548!3.24e-07!115;CL:0000004!3.24e-07!115;CL:0000255!3.24e-07!115;CL:0000063!6.21e-07!66
|ontology_enrichment_celltype=CL:0000548!3.24e-07!115;CL:0000004!3.24e-07!115;CL:0000255!3.24e-07!115;CL:0000063!6.21e-07!66
|ontology_enrichment_celltype_v019_2=CL:0000219,3.31e-08,54;CL:0000034,7.98e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.37e-08!52;UBERON:0005068!5.37e-08!52;UBERON:0006241!5.37e-08!52;UBERON:0007135!5.37e-08!52;UBERON:0000073!6.27e-07!75;UBERON:0001016!6.27e-07!75;UBERON:0001017!8.21e-07!73;UBERON:0005743!8.21e-07!73
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.04e-07,52;UBERON:0005068,3.04e-07,52;UBERON:0006241,3.04e-07,52;UBERON:0007135,3.04e-07,52;UBERON:0001017,3.15e-07,73;UBERON:0001016,3.79e-07,75;UBERON:0000073,5.73e-07,54
|phase1_expression=1.12104192973356,0,0,1.20985684522732,1.00179145989269,2.18243053485457,2.33612640595526,0.903863264091034,18.7249000461717,18.9592266320815,18.8339765048055,20.6609891797921,1.19840510951844,2.09808965805594,2.33176833270964,1.82227740650843,0.699561878128147,0.157731082679119,0.411343300817216,0.84877930359606,0.765389611359628,0.695036658406197,0.261199789138935,1.43993180514066,1.14704640533585,1.14846392823004,0.86152399231815,0.646413698057667,1.52018735565099,0.504060259519861,1.55211357458713,3.81018404075779,9.22597181376855,0,2.3108129580102,3.32469290716985,3.26670970019791,0,0,0,0.588231488031014,0,0.485510353031154,1.1330713617802,1.31790010585369,1.28482726513177,3.9119567217402,1.96222640742402,1.75748946187577,1.74986909166855,1.67983705950435,0,0.503347818173209,0.725362142011344,2.01656279485478,0,0,0,1.41621522601718,1.05798195854407,3.1691570175309,3.72728985276045,2.66788438833342,0.899899717281399,2.96659908770092,0,2.39680088414724,3.45796474789399,0.829516898467821,0.945041568321835,0.630974884054146,1.14260393761521,1.76694832761291,0.122490799214954,0.575072826109418,1.83843757322004,0,1.14918604276669,1.38245879930619,1.05509030184155,1.64677758484337,1.04182674111352,0.279182999001381,0.56276261003168,1.06958773443767,1.17851434189467,1.99320353118744,1.3047961207771,1.13589289999776,0.755715601067855,0.289864488701678,0.860423876981386,2.03991400112325,0.539703191637817,0,0,0.702222100658759,2.89731548382698,2.59786004602869,2.47337702157238,0.422530259330042,1.28326477414318,2.54805239706646,0,1.29894624606728,1.26679932737549,1.51657333504435,0.5709193985953,1.03575153458869,0.890652834388949,1.04091196059682,0,0.461230994512117,0.150722640552623,0.352766121407114,0.502666365318702,0.247194967734374,0.722996784599558,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,1.17112318804619,1.46612694769419,1.78819938646014,1.07833612055328,1.79970819298022,2.03312363316904,0.748953197024114,2.28750301409313,1.00523481690292,1.21677024134594,1.79000820131231,1.0389402227978,1.1356888414743,1.12023300235348,0.622034853050465,1.26361379216837,0.841767423545896,1.30120442962704,0.919608417733892,0.540186389416048,0.30140963567143,0.748401490664606,1.66547836370305,0.843315521037559,1.29351685369508,1.29340795759705,1.89106080167819,0.879755620819744,0.219195732427575,0,0.348252166522167,0.61734640922383,0.59710280045548,0.702213187313235,2.57347907114715,2.27330799516474,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.590292695242212,0,0.232533944750408,0.536546802799238,0,0.329119699826961,0.32833492815819,0,0.146199987425332,0.439100230582101,0,1.68231958851302,1.02904612379284,0.660837565967596,0.793351699990633,0.213288250535234,1.16118335930219,0.77320476793256,1.81515172161008,1.55664630691409,2.09248188723815,1.42358718463353,2.30578536613615,0.502670417600539,1.59165177632921,1.16978452271472,0,0.432276099749388,1.1948476395262,0.758671603812327,0.685491075658373,0,0.814605311381257,0.775809948670503,0.701358198903186,0.569128834118316,0.590440591918409,0.156998727841375,0.493588655687202,0.592905254174298,1.16791574001266,1.57247196090562,1.79889689907883,0.202860121388503,0.482354319504834,1.01850340712568,1.72617682470486,0.810676133875177,1.09824565275233,0,0,0.624075346229121,0,0.358794827043824,0.482443521363367,0.369506380333209,0.37898282354097,0.325929952884052,0.169745085775188,0,0.167506257441816,0.476087281772027,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0,1.76605648986571,0.937693492737625,0.491804836130026,0.252470927204373,0.94652465824877,0.390438744296638,0,0.955875191810208,0,0.566153061577665,0,0.584511715822624,0,1.28528526568723,1.70328102249922,1.06839362200353,0.651547837414304,0.989820737835213,2.65490276679926,0.971122544619926,0.906970670894253,0.377210159511796,0.590603785761546,1.53717573971964,1.80899805217755,3.27180356529755,0.356497378384721,1.26414703174326,0,2.06271086496374,0.680879211507576,1.08036656418786,1.16422815404479,0.428674070063185,0.532020700926821,1.24858172321449,0.822745103010605,0.913394847343798,1.87737366450968,0,0.661585194164886,0.65954501176592,0.484393280087717,0.904693873922338,0.358117032009409,0.656563598980245,1.45740418314925,2.22510362412612,0.170870880797853,0.206386867963223,0.925972636848558,0.188368457004691,0.410082683163076,0.686334519619568,1.01987057996313,0.559805809294632,1.10559979043539,0,1.10717597753397,1.21991680276109,0.86404272657441,1.04544148007234,0.436725127492355,0.809186078308924,0.578574190077352,0,0.777689839750757,0,0,0.448549638131936,0.66183396182839,0.972255941720238,0.774958940866387,0.337912250981556,0.469428954583016,0.781226309063701,0.943734099831398,0.241584120826006,0.288030006257865,0.316011120628178,0.608175645870493,0.410843828659309,1.03936658382236,0.537080087002444,0.596044064343795,0.600977247599844,0.738447635872886,0.302899349844443,0.685861259894999,0.705783295957884,0.487289403698762,0.481059208201647,0.350630706544707,0.453460767230423,0.665957860122194,1.07656627931371,1.17519231454855,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0,2.82375921308533,2.30162618253588,0.572895513439397,0.859265911718438,2.05524755931193,3.0215755895588,1.35004500046361,1.35096360967266,2.71885445390523,3.10656187051092,0.62272408550506,1.19707462020309,1.36586884603307,1.45864030240976,0.838452650511929,0.551530525350042,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,0.760437899670719,0.565879024158229,0.561849044819294,0.576226371643824,0.631790158511746,0.476293691283074,0.811190281613988,0.578727661391115,0,0.588795680537589,0.342869252385415,0.354951612318675,0.715308569841963,0.290692833264657,0.470546902076653,0.423073039458382,0.548783918618318,0.526139422875686,0.950628796921032,0.561142271657738,0.474540072496697,0.788035859004508,2.86461730218783,0.154936841185966,0.192906610981141,0.749431733813838,0.935726433781634,0.644613162144895,0.382576664137687,0.441182838239031,0.231867835620421
|phase1_expression=1.12104192973356,0,0,1.20985684522732,1.00179145989269,2.18243053485457,2.33612640595526,0.903863264091034,18.7249000461717,18.9592266320815,18.8339765048055,20.6609891797921,1.19840510951844,2.09808965805594,2.33176833270964,1.82227740650843,0.699561878128147,0.157731082679119,0.411343300817216,0.84877930359606,0.765389611359628,0.695036658406197,0.261199789138935,1.43993180514066,1.14704640533585,1.14846392823004,0.86152399231815,0.646413698057667,1.52018735565099,0.504060259519861,1.55211357458713,3.81018404075779,9.22597181376855,0,2.3108129580102,3.32469290716985,3.26670970019791,0,0,0,0.588231488031014,0,0.485510353031154,1.1330713617802,1.31790010585369,1.28482726513177,3.9119567217402,1.96222640742402,1.75748946187577,1.74986909166855,1.67983705950435,0,0.503347818173209,0.725362142011344,2.01656279485478,0,0,0,1.41621522601718,1.05798195854407,3.1691570175309,3.72728985276045,2.66788438833342,0.899899717281399,2.96659908770092,0,2.39680088414724,3.45796474789399,0.829516898467821,0.945041568321835,0.630974884054146,1.14260393761521,1.76694832761291,0.122490799214954,0.575072826109418,1.83843757322004,0,1.14918604276669,1.38245879930619,1.05509030184155,1.64677758484337,1.04182674111352,0.279182999001381,0.56276261003168,1.06958773443767,1.17851434189467,1.99320353118744,1.3047961207771,1.13589289999776,0.755715601067855,0.289864488701678,0.860423876981386,2.03991400112325,0.539703191637817,0,0,0.702222100658759,2.89731548382698,2.59786004602869,2.47337702157238,0.422530259330042,1.28326477414318,2.54805239706646,0,1.29894624606728,1.26679932737549,1.51657333504435,0.5709193985953,1.03575153458869,0.890652834388949,1.04091196059682,0,0.461230994512117,0.150722640552623,0.352766121407114,0.502666365318702,0.247194967734374,0.722996784599558,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,1.17112318804619,1.46612694769419,1.78819938646014,1.07833612055328,1.79970819298022,2.03312363316904,0.748953197024114,2.28750301409313,1.00523481690292,1.21677024134594,1.79000820131231,1.0389402227978,1.1356888414743,1.12023300235348,0.622034853050465,1.26361379216837,0.841767423545896,1.30120442962704,0.919608417733892,0.540186389416048,0.30140963567143,0.748401490664606,1.66547836370305,0.843315521037559,1.29351685369508,1.29340795759705,1.89106080167819,0.879755620819744,0.219195732427575,0,0.348252166522167,0.61734640922383,0.59710280045548,0.702213187313235,2.57347907114715,2.27330799516474,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.590292695242212,0,0.232533944750408,0.536546802799238,0,0.329119699826961,0.32833492815819,0,0.146199987425332,0.439100230582101,0,1.68231958851302,1.02904612379284,0.660837565967596,0.793351699990633,0.213288250535234,1.16118335930219,0.77320476793256,1.81515172161008,1.55664630691409,2.09248188723815,1.42358718463353,2.30578536613615,0.502670417600539,1.59165177632921,1.16978452271472,0,0.432276099749388,1.1948476395262,0.758671603812327,0.685491075658373,0,0.814605311381257,0.775809948670503,0.701358198903186,0.569128834118316,0.590440591918409,0.156998727841375,0.493588655687202,0.592905254174298,1.16791574001266,1.57247196090562,1.79889689907883,0.202860121388503,0.482354319504834,1.01850340712568,1.72617682470486,0.810676133875177,1.09824565275233,0,0,0.624075346229121,0,0.358794827043824,0.482443521363367,0.369506380333209,0.37898282354097,0.325929952884052,0.169745085775188,0,0.167506257441816,0.476087281772027,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0.144649058581512,1.50791283939272,0,0,0,1.76605648986571,0.937693492737625,0.491804836130026,0.252470927204373,0.94652465824877,0.390438744296638,0,0.955875191810208,0,0.566153061577665,0,0.584511715822624,0,1.28528526568723,1.70328102249922,1.06839362200353,0.651547837414304,0.989820737835213,2.65490276679926,0.971122544619926,0.906970670894253,0.377210159511796,0.590603785761546,1.53717573971964,1.80899805217755,3.27180356529755,0.356497378384721,1.26414703174326,0,2.06271086496374,0.680879211507576,1.08036656418786,1.16422815404479,0.428674070063185,0.532020700926821,1.24858172321449,0.822745103010605,0.913394847343798,1.87737366450968,0,0.661585194164886,0.65954501176592,0.484393280087717,0.904693873922338,0.358117032009409,0.656563598980245,1.45740418314925,2.22510362412612,0.170870880797853,0.206386867963223,0.925972636848558,0.188368457004691,0.410082683163076,0.686334519619568,1.01987057996313,0.559805809294632,1.10559979043539,0,1.10717597753397,1.21991680276109,0.86404272657441,1.04544148007234,0.436725127492355,0.809186078308924,0.578574190077352,0,0.777689839750757,0,0,0.448549638131936,0.66183396182839,0.972255941720238,0.774958940866387,0.337912250981556,0.469428954583016,0.781226309063701,0.943734099831398,0.241584120826006,0.288030006257865,0.316011120628178,0.608175645870493,0.410843828659309,1.03936658382236,0.537080087002444,0.596044064343795,0.600977247599844,0.738447635872886,0.302899349844443,0.685861259894999,0.705783295957884,0.487289403698762,0.481059208201647,0.350630706544707,0.453460767230423,0.665957860122194,1.07656627931371,1.17519231454855,0.386379188064381,0.187682475451182,0.36630324853453,0.428736758158132,0,2.82375921308533,2.30162618253588,0.572895513439397,0.859265911718438,2.05524755931193,3.0215755895588,1.35004500046361,1.35096360967266,2.71885445390523,3.10656187051092,0.62272408550506,1.19707462020309,1.36586884603307,1.45864030240976,0.838452650511929,0.551530525350042,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,0.760437899670719,0.565879024158229,0.561849044819294,0.576226371643824,0.631790158511746,0.476293691283074,0.811190281613988,0.578727661391115,0,0.588795680537589,0.342869252385415,0.354951612318675,0.715308569841963,0.290692833264657,0.470546902076653,0.423073039458382,0.548783918618318,0.526139422875686,0.950628796921032,0.561142271657738,0.474540072496697,0.788035859004508,2.86461730218783,0.154936841185966,0.192906610981141,0.749431733813838,0.935726433781634,0.644613162144895,0.382576664137687,0.441182838239031,0.231867835620421
|short_description=p4@Slc19a1
|short_description=p4@Slc19a1
}}
}}

Latest revision as of 07:51, 26 September 2015

Short description:p4@Slc19a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Slc19a1_5end
Coexpression cluster:MCL_coexpression_mm9:68
Association with transcript: -3bp_to_ENSMUST00000132984_5end
EntrezGene:Slc19a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Slc19a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E718.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F218.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E618.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F120.66
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.08
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.03
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
motile cell3.31e-0854
stem cell7.98e-0797

Uber anatomy
Ontology termp-valuen
neural tube3.04e-0752
neural rod3.04e-0752
future spinal cord3.04e-0752
neural keel3.04e-0752
central nervous system3.15e-0773
nervous system3.79e-0775
regional part of nervous system5.73e-0754
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:76496049..76496060,%2B&oldid=4241792"