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FFCP PHASE1:Mm9::chr10:76576673..76576738,-: Difference between revisions

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(Created page with "{{FFCP |id=chr10:76576673..76576738,- |short_description=p3@Col18a1 |description=CAGE_peak_3_at_Col18a1_5end |association_with_transcript=0bp_to_ENSMUST00000149744_5end |...")
 
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{{FFCP
{{FFCP
|id=chr10:76576673..76576738,-
|DHSsupport=NA
|short_description=p3@Col18a1
|DPIdataset=NA
|description=CAGE_peak_3_at_Col18a1_5end
|association_with_transcript=0bp_to_ENSMUST00000149744_5end
|EntrezGene=12822
|EntrezGene=12822
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=D3Z5C2
|UniProt=D3Z5C2
|association_with_transcript=0bp_to_ENSMUST00000149744_5end
|cluster_id=chr10:76576673..76576738,-
|description=CAGE_peak_3_at_Col18a1_5end
|id=chr10:76576673..76576738,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!1.00e-13!22;UBERON:0007499!1.00e-13!22;UBERON:0006925!1.00e-13!22;UBERON:0009497!1.00e-13!22;UBERON:0000015!1.00e-13!22;UBERON:0002423!1.00e-13!22;UBERON:0006235!1.00e-13!22;UBERON:0008835!1.00e-13!22;UBERON:0003894!1.00e-13!22;UBERON:0004161!1.00e-13!22;UBERON:0008836!1.00e-13!22;UBERON:0005177!3.52e-13!85;UBERON:0009854!3.70e-13!23;UBERON:0009856!3.70e-13!23;UBERON:0002365!3.75e-13!25;UBERON:0002330!3.75e-13!25;UBERON:0002100!2.03e-12!98;UBERON:0009569!1.15e-11!66;UBERON:0000466!2.31e-11!79;UBERON:0005256!8.02e-11!47;UBERON:0003104!3.41e-10!131;UBERON:0009142!3.41e-10!131;UBERON:0005172!2.51e-09!49;UBERON:0005173!2.51e-09!49;UBERON:0002417!2.51e-09!49;UBERON:0000916!2.51e-09!49;UBERON:0000077!5.95e-09!97;UBERON:0003914!9.91e-09!47;UBERON:0001041!1.09e-08!92
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.08e-14,22;UBERON:0007499,2.08e-14,22;UBERON:0006925,2.08e-14,22;UBERON:0009497,2.08e-14,22;UBERON:0000015,2.08e-14,22;UBERON:0002423,2.08e-14,22;UBERON:0006235,2.08e-14,22;UBERON:0008835,2.08e-14,22;UBERON:0003894,2.08e-14,22;UBERON:0004161,2.08e-14,22;UBERON:0008836,2.08e-14,22;UBERON:0005177,3.74e-14,79;UBERON:0009854,8.28e-14,23;UBERON:0009856,8.28e-14,23;UBERON:0002365,8.40e-14,25;UBERON:0002330,8.40e-14,25;UBERON:0002100,9.26e-13,90;UBERON:0009569,2.62e-12,66;UBERON:0005256,5.95e-11,45;UBERON:0003104,1.79e-10,61;UBERON:0009142,1.79e-10,61;UBERON:0005172,2.36e-09,49;UBERON:0005173,2.36e-09,49;UBERON:0002417,2.36e-09,49;UBERON:0000916,2.36e-09,49;UBERON:0003914,3.30e-08,47;UBERON:0001041,3.45e-07,80
|phase1_expression=3.84357233051505,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90997590104751,3.04130793658544,0.734187008646726,17.9950009200049,0,1.75748946187577,0.972149495371417,3.49966054063406,1.43752564364972,0,0,0,2.31533492432352,11.4613375975503,3.09403255366465,0,0,0,5.08266798103698,13.3394219416671,0.899899717281399,1.97773272513395,4.9733608046227,28.4620104992484,4.99483796918021,0,0,0,1.14260393761521,6.18431914664518,0.244981598429908,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.15279824777681,5.59794312399969,3.98640706237488,0.186399445825301,0.757261933331841,1.81371744256285,11.5945795480671,78.2985728053062,108.79541339324,200.22988409763,235.219063116056,208.332502500261,43.3973258207113,2.04516387093669,2.59786004602869,2.12003744706204,25.6335023993559,2.56652954828636,7.64415719119937,0,0,0,0,60.7458240105399,1.8125651855302,3.71105347662062,2.60227990149204,10.0473607843007,8.53277339847416,3.61734337326294,6.46737889246376,5.52933001850572,3.46072954828123,9.39895819979426,0.884610551949874,7.44127509758082,2.87093973998512,1.45462575940567,1.86391761218122,0.292780797011547,0.628340120440365,3.57639877292028,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,1.02286182932132,1.0389402227978,0.648965052271031,13.3409566643914,5.47390670684409,1.76905930903572,2.52530227063769,0,0.689706313300419,0.720248519221397,4.37043971723574,2.78949646520444,2.562274405697,2.24884138943349,3.88055056108524,0,0,0,1.31517439456545,1.66828349535359,7.66154766348766,10.2891068203972,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.473489471170421,0.590292695242212,0.617068451549513,2.79040733700489,5.36546802799238,3.26942958628075,3.78487654801005,3.447516745661,2.43206428637567,4.38599962275997,5.26920276698522,3.08674763148855,0.210289948564127,0.617427674275707,0.660837565967596,1.85115396664481,0,0.464473343720877,2.31961430379768,1.4117846723634,2.44615848229357,3.42406127002606,2.84717436926707,2.47048432086016,5.52937459360593,3.38226002469956,3.50935356814416,5.39291645192533,3.8904848977445,3.98282546508734,2.65535061334314,3.54170389090159,5.63538678365402,2.24016460629846,2.52138233317913,3.0158402552837,11.3193401452421,3.83786384746966,2.66897837330337,1.72756029490521,119.173956089034,2.50267658574141,9.63139076054695,24.9596944747188,45.6435273124132,62.7060615356284,72.3137419059232,64.4439347889816,115.440281463825,102.411407119154,110.701519026063,229.610964711467,218.114333507078,208.630153184314,193.928604017187,243.151534767137,15.888774354328,0,2.60743962307241,5.09235257325564,13.6120344007331,25.1259386162724,44.9902481274566,25.5625078693716,31.0541233889196,29.0118743439895,23.7587605299656,19.1720078217413,23.13978757003,15.6220983268033,0,0,5.90117127622843,4.69092468718045,0.963303539926752,1.40654023910644,1.96721934452011,9.3414243065618,0.315508219416257,0,0.430846795465598,0,0.445597348164788,0.566153061577665,0.809621403349789,0.584511715822624,0.790575555893047,0.321321316421807,8.37446502728785,7.12262414669021,8.47012188638596,4.94910368917606,6.63725691699814,0.971122544619926,2.72091201268276,2.64047111658257,8.85905678642318,9.22305443831782,13.4382712447475,10.1789444253702,8.55593708123331,9.16506598013866,4.21674434299995,4.12542172992747,0.340439605753788,0,0.258717367565509,0.643011105094777,0.532020700926821,2.14042581122485,2.46823530903181,4.87143918583359,1.17335854031855,0.21183207086382,4.19003956304428,25.5573692059294,19.5371956302046,23.7632924216934,23.5163517686179,19.2044852701722,6.12109756922687,0.927126510052548,0.170870880797853,1.65109494370578,2.59272338317596,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,0.954670618015114,0,5.69294507955176,11.0165447638237,12.5452977608681,16.3771922809633,17.5323650300267,28.7634025924169,10.7319936213452,7.64728342421578,2.4853572523477,0,1.04661582230785,2.31641886639937,3.69457257853691,4.26227417476513,2.87225413334323,4.92900402312167,7.55185432094911,4.19437377702843,0.966336483304024,0.864090018773596,3.79213344753814,4.66267995167378,7.18976700153791,5.1968329191118,3.75956060901711,1.58945083825012,1.32214994471966,1.62458479892035,0.403865799792591,0.914481679859998,0.504130925684203,0.487289403698762,0.481059208201647,0.818138315270983,6.57518112484113,0,0,0,18.1598218390259,9.75948872346146,8.24182309202693,9.4322086794789,1.50471631210609,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,2.21953687480374,8.50873509739029,8.59413966774727,8.82448840560068,14.0015438515018,13.3922787205281,15.7250412699989,11.1186773176071,17.7435509923168,15.2787336522722,10.8624148665064,12.2928292617349,12.1188839496344,8.57328644309533,9.96605203125757,8.29509647993932,13.5988347265091,15.1614887738429,12.0004238334895,12.600782237313,14.5446075867866,13.8079095800712,12.516547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|phase1_expression=3.84357233051505,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,0,0,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90997590104751,3.04130793658544,0.734187008646726,17.9950009200049,0,1.75748946187577,0.972149495371417,3.49966054063406,1.43752564364972,0,0,0,2.31533492432352,11.4613375975503,3.09403255366465,0,0,0,5.08266798103698,13.3394219416671,0.899899717281399,1.97773272513395,4.9733608046227,28.4620104992484,4.99483796918021,0,0,0,1.14260393761521,6.18431914664518,0.244981598429908,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.15279824777681,5.59794312399969,3.98640706237488,0.186399445825301,0.757261933331841,1.81371744256285,11.5945795480671,78.2985728053062,108.79541339324,200.22988409763,235.219063116056,208.332502500261,43.3973258207113,2.04516387093669,2.59786004602869,2.12003744706204,25.6335023993559,2.56652954828636,7.64415719119937,0,0,0,0,60.7458240105399,1.8125651855302,3.71105347662062,2.60227990149204,10.0473607843007,8.53277339847416,3.61734337326294,6.46737889246376,5.52933001850572,3.46072954828123,9.39895819979426,0.884610551949874,7.44127509758082,2.87093973998512,1.45462575940567,1.86391761218122,0.292780797011547,0.628340120440365,3.57639877292028,0,0,0,0.149790639404823,0,0.125654352112864,0.173824320192276,1.02286182932132,1.0389402227978,0.648965052271031,13.3409566643914,5.47390670684409,1.76905930903572,2.52530227063769,0,0.689706313300419,0.720248519221397,4.37043971723574,2.78949646520444,2.562274405697,2.24884138943349,3.88055056108524,0,0,0,1.31517439456545,1.66828349535359,7.66154766348766,10.2891068203972,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0.473489471170421,0.590292695242212,0.617068451549513,2.79040733700489,5.36546802799238,3.26942958628075,3.78487654801005,3.447516745661,2.43206428637567,4.38599962275997,5.26920276698522,3.08674763148855,0.210289948564127,0.617427674275707,0.660837565967596,1.85115396664481,0,0.464473343720877,2.31961430379768,1.4117846723634,2.44615848229357,3.42406127002606,2.84717436926707,2.47048432086016,5.52937459360593,3.38226002469956,3.50935356814416,5.39291645192533,3.8904848977445,3.98282546508734,2.65535061334314,3.54170389090159,5.63538678365402,2.24016460629846,2.52138233317913,3.0158402552837,11.3193401452421,3.83786384746966,2.66897837330337,1.72756029490521,119.173956089034,2.50267658574141,9.63139076054695,24.9596944747188,45.6435273124132,62.7060615356284,72.3137419059232,64.4439347889816,115.440281463825,102.411407119154,110.701519026063,229.610964711467,218.114333507078,208.630153184314,193.928604017187,243.151534767137,15.888774354328,0,2.60743962307241,5.09235257325564,13.6120344007331,25.1259386162724,44.9902481274566,25.5625078693716,31.0541233889196,29.0118743439895,23.7587605299656,19.1720078217413,23.13978757003,15.6220983268033,0,0,5.90117127622843,4.69092468718045,0.963303539926752,1.40654023910644,1.96721934452011,9.3414243065618,0.315508219416257,0,0.430846795465598,0,0.445597348164788,0.566153061577665,0.809621403349789,0.584511715822624,0.790575555893047,0.321321316421807,8.37446502728785,7.12262414669021,8.47012188638596,4.94910368917606,6.63725691699814,0.971122544619926,2.72091201268276,2.64047111658257,8.85905678642318,9.22305443831782,13.4382712447475,10.1789444253702,8.55593708123331,9.16506598013866,4.21674434299995,4.12542172992747,0.340439605753788,0,0.258717367565509,0.643011105094777,0.532020700926821,2.14042581122485,2.46823530903181,4.87143918583359,1.17335854031855,0.21183207086382,4.19003956304428,25.5573692059294,19.5371956302046,23.7632924216934,23.5163517686179,19.2044852701722,6.12109756922687,0.927126510052548,0.170870880797853,1.65109494370578,2.59272338317596,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0,0.954670618015114,0,5.69294507955176,11.0165447638237,12.5452977608681,16.3771922809633,17.5323650300267,28.7634025924169,10.7319936213452,7.64728342421578,2.4853572523477,0,1.04661582230785,2.31641886639937,3.69457257853691,4.26227417476513,2.87225413334323,4.92900402312167,7.55185432094911,4.19437377702843,0.966336483304024,0.864090018773596,3.79213344753814,4.66267995167378,7.18976700153791,5.1968329191118,3.75956060901711,1.58945083825012,1.32214994471966,1.62458479892035,0.403865799792591,0.914481679859998,0.504130925684203,0.487289403698762,0.481059208201647,0.818138315270983,6.57518112484113,0,0,0,18.1598218390259,9.75948872346146,8.24182309202693,9.4322086794789,1.50471631210609,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,2.21953687480374,8.50873509739029,8.59413966774727,8.82448840560068,14.0015438515018,13.3922787205281,15.7250412699989,11.1186773176071,17.7435509923168,15.2787336522722,10.8624148665064,12.2928292617349,12.1188839496344,8.57328644309533,9.96605203125757,8.29509647993932,13.5988347265091,15.1614887738429,12.0004238334895,12.600782237313,14.5446075867866,13.8079095800712,12.516547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|short_description=p3@Col18a1
}}
}}

Latest revision as of 07:53, 26 September 2015

Short description:p3@Col18a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Col18a1_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000149744_5end
EntrezGene:Col18a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Col18a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.50
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C828.46
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.59
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F778.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C4108.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C8200.23
Mouse hepatocyte, donor6.CNhs13090.11822-124F4235.22
Mouse hepatocyte, donor8.CNhs13091.11824-124F6208.33
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A743.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G625.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B660.75
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C16.47
adrenal gland, neonate N25.CNhs11223.1377-27I35.53
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.47
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C62.79
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B510.29
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G12.43
heart, neonate N20.CNhs11127.821-26I64.39
heart, neonate N25.CNhs11196.1351-25D35.27
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G13.98
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G73.02
kidney, neonate N10.CNhs11206.758-6D511.32
kidney, neonate N20.CNhs11113.832-19I13.84
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B2119.17
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H69.63
liver, embryo E14.CNhs10594.409-16E124.96
liver, embryo E15.CNhs10520.433-16D745.64
liver, embryo E16.CNhs10523.462-17F562.71
liver, embryo E17.CNhs10510.481-18A372.31
liver, embryo E18.CNhs10579.499-43G464.44
liver, neonate N00.CNhs11117.641-24F4115.44
liver, neonate N03.CNhs11123.1345-25G2102.41
liver, neonate N06.CNhs11101.684-20A8110.70
liver, neonate N07.CNhs11103.716-20H2229.61
liver, neonate N10.CNhs11115.751-24B9218.11
liver, neonate N20.CNhs11220.823-25A3208.63
liver, neonate N25.CNhs11198.1368-26H1193.93
liver, neonate N30.CNhs11106.1382-42D1243.15
lung, adult.CNhs10474.28-22B115.89
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B613.61
lung, embryo E17.CNhs10605.480-44A625.13
lung, embryo E18.CNhs10583.1287-20I644.99
lung, neonate N00.CNhs11224.640-42C625.56
lung, neonate N06.CNhs11212.683-20E531.05
lung, neonate N07.CNhs11111.715-19A329.01
lung, neonate N10.CNhs11219.750-23E623.76
lung, neonate N20.CNhs11109.822-18A419.17
lung, neonate N25.CNhs11119.1359-25C723.14
lung, neonate N30.CNhs11133.1394-42H215.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.34
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I78.37
ovary, embryo E18.CNhs11040.505-44H77.12
ovary, neonate N00.CNhs11217.1299-22I48.47
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G38.86
pancreas, embryo E18.CNhs10580.1535-43I79.22
pancreas, neonate N00.CNhs11105.645-26G913.44
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.47
pituitary gland, neonate N00.CNhs11190.1308-22E94.87
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C325.56
skin, neonate N00.CNhs11124.650-25G419.54
skin, neonate N03.CNhs11215.662-22H323.76
skin, neonate N06.CNhs11097.693-20I523.52
skin, neonate N10.CNhs11108.762-6C419.20
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G85.69
stomach, embryo E16.CNhs11022.459-17D411.02
stomach, embryo E17.CNhs11006.1035-18D512.55
stomach, embryo E18.CNhs10999.1286-20C616.38
stomach, neonate N03.CNhs11193.1340-24B817.53
stomach, neonate N07.CNhs11210.718-18A928.76
stomach, neonate N25.CNhs11104.1355-25E410.73
stomach, neonate N30.CNhs11134.1386-42I17.65
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I47.55
testis, neonate N10.CNhs11204.763-44D94.19
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I27.19
thymus, embryo E16.CNhs11002.456-26C55.20
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E418.16
uterus, adult pregnant day19.CNhs10497.590-15F59.76
uterus, adult.CNhs10509.92-27E58.24
vagina, adult.CNhs10502.89-27D59.43
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H22.22
whole body, embryo E14.5.CNhs10578.420-27D28.51
whole body, embryo E14.CNhs10519.395-14B18.59
whole body, embryo E16.CNhs10514.453-14F28.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G511.12
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.16
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.26
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F917.36
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B316.84
whole body, neonate N00.CNhs10525.657-19C220.41
whole body, neonate N01.CNhs10576.659-23C68.80
whole body, neonate N06.CNhs10515.692-21D111.91
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver2.08e-1422
epithelial sac2.08e-1422
digestive gland2.08e-1422
epithelium of foregut-midgut junction2.08e-1422
anatomical boundary2.08e-1422
hepatobiliary system2.08e-1422
foregut-midgut junction2.08e-1422
hepatic diverticulum2.08e-1422
liver primordium2.08e-1422
septum transversum2.08e-1422
liver bud2.08e-1422
trunk region element3.74e-1479
digestive tract diverticulum8.28e-1423
sac8.28e-1423
exocrine gland8.40e-1425
exocrine system8.40e-1425
trunk9.26e-1390
subdivision of trunk2.62e-1266
trunk mesenchyme5.95e-1145
mesenchyme1.79e-1061
entire embryonic mesenchyme1.79e-1061
abdomen element2.36e-0949
abdominal segment element2.36e-0949
abdominal segment of trunk2.36e-0949
abdomen2.36e-0949
epithelial tube3.30e-0847
foregut3.45e-0780
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