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FFCP PHASE1:Mm9::chr10:77365173..77365206,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:77365173..77365206,-
|DHSsupport=NA
|short_description=p2@Lrrc3
|DPIdataset=NA
|description=CAGE_peak_2_at_Lrrc3_5end
|association_with_transcript=74bp_to_ENSMUST00000057608,NM_145152,uc007fwi.2_5end
|EntrezGene=237387
|EntrezGene=237387
|HGNC=
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=P59034,Q543Z4
|UniProt=P59034,Q543Z4
|association_with_transcript=74bp_to_ENSMUST00000057608,NM_145152,uc007fwi.2_5end
|cluster_id=chr10:77365173..77365206,-
|description=CAGE_peak_2_at_Lrrc3_5end
|id=chr10:77365173..77365206,-
|ontology_enrichment_celltype=CL:0000540!4.87e-08!33;CL:0000047!4.87e-08!33;CL:0000031!4.87e-08!33;CL:0000404!4.87e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000540,1.89e-11,33;CL:0000047,1.89e-11,33;CL:0000031,1.89e-11,33;CL:0000404,1.89e-11,33;CL:0000117,2.10e-09,23;CL:0000337,2.10e-09,23;CL:0000393,9.74e-09,39;CL:0000211,9.74e-09,39;CL:0002319,2.22e-07,43;CL:0000221,4.40e-07,44;CL:0000133,4.40e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!2.72e-15!22;UBERON:0007499!2.72e-15!22;UBERON:0006925!2.72e-15!22;UBERON:0009497!2.72e-15!22;UBERON:0000015!2.72e-15!22;UBERON:0002423!2.72e-15!22;UBERON:0006235!2.72e-15!22;UBERON:0008835!2.72e-15!22;UBERON:0003894!2.72e-15!22;UBERON:0004161!2.72e-15!22;UBERON:0008836!2.72e-15!22;UBERON:0009854!5.87e-14!23;UBERON:0009856!5.87e-14!23;UBERON:0002365!6.64e-14!25;UBERON:0002330!6.64e-14!25;UBERON:0005172!3.64e-09!49;UBERON:0005173!3.64e-09!49;UBERON:0002417!3.64e-09!49;UBERON:0000916!3.64e-09!49;UBERON:0001017!1.74e-07!73;UBERON:0005743!1.74e-07!73;UBERON:0004121!4.99e-07!102;UBERON:0000924!4.99e-07!102;UBERON:0006601!4.99e-07!102;UBERON:0000073!5.80e-07!75;UBERON:0001016!5.80e-07!75;UBERON:0002346!6.51e-07!71;UBERON:0003075!6.51e-07!71;UBERON:0007284!6.51e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.42e-25,22;UBERON:0007499,2.42e-25,22;UBERON:0006925,2.42e-25,22;UBERON:0009497,2.42e-25,22;UBERON:0000015,2.42e-25,22;UBERON:0002423,2.42e-25,22;UBERON:0006235,2.42e-25,22;UBERON:0008835,2.42e-25,22;UBERON:0003894,2.42e-25,22;UBERON:0004161,2.42e-25,22;UBERON:0008836,2.42e-25,22;UBERON:0009854,6.69e-24,23;UBERON:0009856,6.69e-24,23;UBERON:0002365,2.28e-21,25;UBERON:0002330,2.28e-21,25;UBERON:0005172,6.73e-11,49;UBERON:0005173,6.73e-11,49;UBERON:0002417,6.73e-11,49;UBERON:0000916,6.73e-11,49;UBERON:0005256,1.43e-10,45;UBERON:0003914,4.73e-08,47;UBERON:0000025,6.65e-08,114;UBERON:0003104,2.80e-07,61;UBERON:0009142,2.80e-07,61;UBERON:0011216,3.97e-07,194;UBERON:0001017,8.82e-07,73
|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.425216450755349,0,0,0.47997726838022,0,0,0,0.215471232685889,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,1.71390590642282,2.65042249141936,0.122490799214954,0.191690942036473,0,3.30347642998166,1.78762273319263,1.68967186581868,1.31886287730194,1.9212405156506,1.56274011167028,1.11673199600552,1.68828783009504,1.06958773443767,3.53554302568401,2.13557521198654,1.3047961207771,0,0.151143120213571,0.579728977403356,4.30211938490693,4.0798280022465,14.0322829825832,13.6453047664011,10.3046184032387,4.35377702408431,0,0,0,0,0,0,0,0,0,0,5.59501010623394,0,0.742210695324124,1.04091196059682,0.913396434936424,0.922461989024234,0.60289056221049,1.76383060703557,0.502666365318702,0.988779870937496,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0.41889341362691,1.53274233125155,0,0,0,0.299581278809645,0.457500602818626,1.50785222535437,1.21677024134594,1.27857728665165,1.0389402227978,2.75810147215188,0.509196819251581,0.373220911830279,0,0.210441855886474,0.260240885925407,0,0.360124259610698,0.30140963567143,0.680364991513279,0.512454881139399,0.562210347358373,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0,1.05144974282064,0.823236899034275,0.660837565967596,0,0.426576501070468,0.928946687441754,0.257734922644187,0,0.22237804384487,0.570676878337677,0.474529061544512,0.823494773620054,1.25667604400135,0.795825888164603,0.58489226135736,0.898819408654221,0,0.796565093017469,0,0.571242563048644,1.1270773567308,0.407302655690628,0,0.49095073923223,0.569128834118316,0.590440591918409,0.784993639206874,1.23397163921801,16.8977997439675,2.50267658574141,1.57247196090562,1.79889689907883,5.68008339887808,8.68237775108701,7.38414970166117,10.3570609482292,11.8358715545776,16.1991233780968,18.6898668485561,20.4677521217677,16.5379966750717,19.4485736019276,14.7105879087968,16.8855232477179,0.184753190166605,0.37898282354097,0.651859905768103,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0.551873492609465,0.80275294993896,0.234423373184406,0,0,0.94652465824877,2.34263246577983,0.430846795465598,1.19484398976276,1.55959071857676,1.41538265394416,1.21443210502468,1.75353514746787,0,0.642642632843614,0.425820255624806,0.534196811001766,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,0,0.388076051348264,0.428674070063185,0,0.713475270408282,0.493647061806363,0,0,0.63549621259146,0.661585194164886,0,0.161464426695906,0.180938774784468,0.358117032009409,0,0.582961673259701,0.370850604021019,0,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0.474503990371703,0.609958401380546,0.648032044930808,0.209088296014469,1.09181281873089,0.674321731924103,2.64491058321075,1.30877970992015,1.03691978633434,0.621339313086926,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.5208175393758,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0,0,0.116876902181569,0,0.221985953374065,0.448569283047378,0.503653849092235,0.19318959403219,0,0.183151624267265,0,0,3.3885110557024,0.460325236507177,0.572895513439397,1.71853182343688,1.37016503954128,0.755393897389701,1.35004500046361,0,0.453142408984205,0.51776031175182,0.103787347584177,0.798049746802062,0.341467211508268,0.243106717068294,1.04806581313991,1.10306105070008,0.222246727801615,0.824140228955577,1.28367683836726,1.26348605881899,0.25347929989024,0.565879024158229,1.12369808963859,1.15245274328765,1.14870937911227,0,1.0429589335037,0.192909220463705,1.23625770240992,0.441596760403192,0.685738504770831,1.24233064311536,0.715308569841963,1.16277133305863,0.846984423737976,1.4384483341585,0.73171189149109,0.263069711437843,0.407412341537585,1.12228454331548,0.949080144993393,0.788035859004508,1.22769312950907,1.08455788830176,0.964533054905707,0.499621155875892,0.467863216890817,1.93383948643468,0.191288332068843,0,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.425216450755349,0,0,0.47997726838022,0,0,0,0.215471232685889,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,1.71390590642282,2.65042249141936,0.122490799214954,0.191690942036473,0,3.30347642998166,1.78762273319263,1.68967186581868,1.31886287730194,1.9212405156506,1.56274011167028,1.11673199600552,1.68828783009504,1.06958773443767,3.53554302568401,2.13557521198654,1.3047961207771,0,0.151143120213571,0.579728977403356,4.30211938490693,4.0798280022465,14.0322829825832,13.6453047664011,10.3046184032387,4.35377702408431,0,0,0,0,0,0,0,0,0,0,5.59501010623394,0,0.742210695324124,1.04091196059682,0.913396434936424,0.922461989024234,0.60289056221049,1.76383060703557,0.502666365318702,0.988779870937496,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0.41889341362691,1.53274233125155,0,0,0,0.299581278809645,0.457500602818626,1.50785222535437,1.21677024134594,1.27857728665165,1.0389402227978,2.75810147215188,0.509196819251581,0.373220911830279,0,0.210441855886474,0.260240885925407,0,0.360124259610698,0.30140963567143,0.680364991513279,0.512454881139399,0.562210347358373,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0,1.05144974282064,0.823236899034275,0.660837565967596,0,0.426576501070468,0.928946687441754,0.257734922644187,0,0.22237804384487,0.570676878337677,0.474529061544512,0.823494773620054,1.25667604400135,0.795825888164603,0.58489226135736,0.898819408654221,0,0.796565093017469,0,0.571242563048644,1.1270773567308,0.407302655690628,0,0.49095073923223,0.569128834118316,0.590440591918409,0.784993639206874,1.23397163921801,16.8977997439675,2.50267658574141,1.57247196090562,1.79889689907883,5.68008339887808,8.68237775108701,7.38414970166117,10.3570609482292,11.8358715545776,16.1991233780968,18.6898668485561,20.4677521217677,16.5379966750717,19.4485736019276,14.7105879087968,16.8855232477179,0.184753190166605,0.37898282354097,0.651859905768103,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0.551873492609465,0.80275294993896,0.234423373184406,0,0,0.94652465824877,2.34263246577983,0.430846795465598,1.19484398976276,1.55959071857676,1.41538265394416,1.21443210502468,1.75353514746787,0,0.642642632843614,0.425820255624806,0.534196811001766,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,0,0.388076051348264,0.428674070063185,0,0.713475270408282,0.493647061806363,0,0,0.63549621259146,0.661585194164886,0,0.161464426695906,0.180938774784468,0.358117032009409,0,0.582961673259701,0.370850604021019,0,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0.474503990371703,0.609958401380546,0.648032044930808,0.209088296014469,1.09181281873089,0.674321731924103,2.64491058321075,1.30877970992015,1.03691978633434,0.621339313086926,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.5208175393758,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0,0,0.116876902181569,0,0.221985953374065,0.448569283047378,0.503653849092235,0.19318959403219,0,0.183151624267265,0,0,3.3885110557024,0.460325236507177,0.572895513439397,1.71853182343688,1.37016503954128,0.755393897389701,1.35004500046361,0,0.453142408984205,0.51776031175182,0.103787347584177,0.798049746802062,0.341467211508268,0.243106717068294,1.04806581313991,1.10306105070008,0.222246727801615,0.824140228955577,1.28367683836726,1.26348605881899,0.25347929989024,0.565879024158229,1.12369808963859,1.15245274328765,1.14870937911227,0,1.0429589335037,0.192909220463705,1.23625770240992,0.441596760403192,0.685738504770831,1.24233064311536,0.715308569841963,1.16277133305863,0.846984423737976,1.4384483341585,0.73171189149109,0.263069711437843,0.407412341537585,1.12228454331548,0.949080144993393,0.788035859004508,1.22769312950907,1.08455788830176,0.964533054905707,0.499621155875892,0.467863216890817,1.93383948643468,0.191288332068843,0,0.231867835620421
|short_description=p2@Lrrc3
}}
}}

Latest revision as of 08:20, 26 September 2015

Short description:p2@Lrrc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Lrrc3_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 74bp_to_ENSMUST00000057608, NM_145152, uc007fwi.2_5end
EntrezGene:Lrrc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Lrrc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.03
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.30
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.60
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B216.90
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D75.68
liver, embryo E16.CNhs10523.462-17F58.68
liver, embryo E17.CNhs10510.481-18A37.38
liver, embryo E18.CNhs10579.499-43G410.36
liver, neonate N00.CNhs11117.641-24F411.84
liver, neonate N03.CNhs11123.1345-25G216.20
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H220.47
liver, neonate N10.CNhs11115.751-24B916.54
liver, neonate N20.CNhs11220.823-25A319.45
liver, neonate N25.CNhs11198.1368-26H114.71
liver, neonate N30.CNhs11106.1382-42D116.89
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A92.64
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.89e-1133
neuronal stem cell1.89e-1133
neuroblast1.89e-1133
electrically signaling cell1.89e-1133
CNS neuron (sensu Vertebrata)2.10e-0923
neuroblast (sensu Vertebrata)2.10e-0923
electrically responsive cell9.74e-0939
electrically active cell9.74e-0939
neural cell2.22e-0743
ectodermal cell4.40e-0744
neurectodermal cell4.40e-0744

Uber anatomy
Ontology termp-valuen
liver2.42e-2522
epithelial sac2.42e-2522
digestive gland2.42e-2522
epithelium of foregut-midgut junction2.42e-2522
anatomical boundary2.42e-2522
hepatobiliary system2.42e-2522
foregut-midgut junction2.42e-2522
hepatic diverticulum2.42e-2522
liver primordium2.42e-2522
septum transversum2.42e-2522
liver bud2.42e-2522
digestive tract diverticulum6.69e-2423
sac6.69e-2423
exocrine gland2.28e-2125
exocrine system2.28e-2125
abdomen element6.73e-1149
abdominal segment element6.73e-1149
abdominal segment of trunk6.73e-1149
abdomen6.73e-1149
trunk mesenchyme1.43e-1045
epithelial tube4.73e-0847
tube6.65e-08114
mesenchyme2.80e-0761
entire embryonic mesenchyme2.80e-0761
organ system subdivision3.97e-07194
central nervous system8.82e-0773
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