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FFCP PHASE1:Mm9::chr2:21127346..21127408,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=208967
|EntrezGene=208967
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q8BH55,A2AUG7,A2AUG4,A2AUG6,Q149D1
|UniProt=Q8BH55,A2AUG7,A2AUG4,A2AUG6,Q149D1
|association_with_transcript=0bp_to_ENSMUST00000054591,ENSMUST00000102952,ENSMUST00000138914,ENSMUST00000138965,NM_001001297,NM_177588,uc008inb.1,uc008inc.1_5end
|association_with_transcript=0bp_to_ENSMUST00000054591,ENSMUST00000102952,ENSMUST00000138914,ENSMUST00000138965,NM_001001297,NM_177588,uc008inb.1,uc008inc.1_5end
|cluster_id=chr2:21127346..21127408,+
|description=CAGE_peak_1_at_Thnsl1_5end
|description=CAGE_peak_1_at_Thnsl1_5end
|id=chr2:21127346..21127408,+
|id=chr2:21127346..21127408,+
|ontology_enrichment_celltype=CL:0000117!1.19e-08!23;CL:0000337!1.19e-08!23;CL:0000540!3.68e-07!33;CL:0000047!3.68e-07!33;CL:0000031!3.68e-07!33;CL:0000404!3.68e-07!33
|ontology_enrichment_celltype=CL:0000117!1.19e-08!23;CL:0000337!1.19e-08!23;CL:0000540!3.68e-07!33;CL:0000047!3.68e-07!33;CL:0000031!3.68e-07!33;CL:0000404!3.68e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-08,23;CL:0000337,1.19e-08,23;CL:0000540,3.68e-07,33;CL:0000047,3.68e-07,33;CL:0000031,3.68e-07,33;CL:0000404,3.68e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.42e-21!63;UBERON:0002346!5.45e-21!71;UBERON:0003075!5.45e-21!71;UBERON:0007284!5.45e-21!71;UBERON:0001049!2.63e-19!52;UBERON:0005068!2.63e-19!52;UBERON:0006241!2.63e-19!52;UBERON:0007135!2.63e-19!52;UBERON:0000955!9.91e-19!50;UBERON:0006238!9.91e-19!50;UBERON:0003056!2.02e-18!49;UBERON:0001017!3.42e-18!73;UBERON:0005743!3.42e-18!73;UBERON:0002616!3.53e-18!49;UBERON:0000073!5.78e-17!75;UBERON:0001016!5.78e-17!75;UBERON:0004121!7.21e-16!102;UBERON:0000924!7.21e-16!102;UBERON:0006601!7.21e-16!102;UBERON:0003080!8.41e-16!40;UBERON:0002780!3.77e-15!39;UBERON:0001890!3.77e-15!39;UBERON:0006240!3.77e-15!39;UBERON:0002020!4.16e-14!34;UBERON:0002791!7.87e-12!29;UBERON:0003528!7.87e-12!29;UBERON:0001893!7.87e-12!29;UBERON:0007811!9.91e-12!86;UBERON:0000025!2.37e-11!114;UBERON:0004111!4.95e-11!122;UBERON:0000153!2.32e-09!94;UBERON:0000956!2.35e-08!21;UBERON:0001869!2.35e-08!21;UBERON:0000203!2.35e-08!21;UBERON:0002619!2.01e-07!17;UBERON:0002021!2.34e-07!10;UBERON:0000411!2.34e-07!10;UBERON:0001950!2.34e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.86e-24,92;UBERON:0002346,1.92e-21,64;UBERON:0003075,1.92e-21,64;UBERON:0007284,1.92e-21,64;UBERON:0000073,1.17e-20,54;UBERON:0001049,2.59e-19,52;UBERON:0005068,2.59e-19,52;UBERON:0006241,2.59e-19,52;UBERON:0007135,2.59e-19,52;UBERON:0003056,2.01e-18,49;UBERON:0001017,3.37e-18,73;UBERON:0010371,1.46e-17,73;UBERON:0001016,5.69e-17,75;UBERON:0000955,7.55e-17,47;UBERON:0006238,7.55e-17,47;UBERON:0002616,2.60e-16,46;UBERON:0003080,8.41e-16,40;UBERON:0004121,1.10e-15,95;UBERON:0000924,1.10e-15,95;UBERON:0006601,1.10e-15,95;UBERON:0002780,3.77e-15,39;UBERON:0001890,3.77e-15,39;UBERON:0006240,3.77e-15,39;UBERON:0002020,4.16e-14,34;UBERON:0003528,7.87e-12,29;UBERON:0002791,7.87e-12,29;UBERON:0001893,7.87e-12,29;UBERON:0000025,2.35e-11,114;UBERON:0004111,4.90e-11,122;UBERON:0000956,2.35e-08,21;UBERON:0001869,2.35e-08,21;UBERON:0000203,2.35e-08,21;UBERON:0002619,2.01e-07,17;UBERON:0002021,2.34e-07,10;UBERON:0000411,2.34e-07,10;UBERON:0001950,2.34e-07,10
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70478032,6.94289028092822,5.49687478166462,7.38805347763219,3.72803587852155,52.9871362363139,4.63501292736334,7.77654905148359,5.63908446197738,4.77891346867605,6.75824501963113,5.51579021635044,6.51021924219751,7.7595914875026,34.3049451572929,40.0361708698433,2.52808896502543,5.6763060281246,4.5192821152524,4.41730798124503,1.79026695667481,4.56967115996909,3.60586348559907,3.2491695978407,3.93769154797776,4.26758117267999,4.53717833115782,3.99577311032985,4.13710919053417,6.07759891344159,6.12172035761071,2.88581739386284,1.70456327558004,2.01461539636894,5.9888774149979,2.81523713176773,8.79127796482872,4.71610433973945,5.01572104035363,24.2843292325339,17.4923589872727,21.1971339972577,23.2001796163978,23.9778881919725,24.1726047164704,27.675922509504,23.4167025676595,24.469690085147,22.2636934053283,6.64239024538731,6.78342284781753,7.0000778359195,5.83456120963906,4.19226325255965,6.06683577885047,5.778414922842,3.91466608753899,7.70206103020357,5.55933865880354,6.08350319736575,6.41329560712659,7.11675456771106,6.6586158501064,6.03072424033939,7.62069906052918,6.60540657885676,7.13764115715709,6.1812885120496,6.62395140604788,4.4573002810104,7.27650805253284,7.15308569841963,3.48831399917588,7.0582035311498,7.10762706290083,6.76833499629258,6.57674278594607,5.43216455383447,6.17256498823512,6.8808310512021,6.2057823896605,6.54769669071503,6.66228417099654,4.62975866354739,8.24374907195222,4.91256377735358,5.80151845930405,3.25190164517034,4.85301122062934,6.02856372613096
|phase1_expression=11.8510146857548,4.53668029931169,1.81999695755814,6.0492842261366,3.50627010962443,3.69334398206158,5.84031601488814,6.71441281896197,5.77233760821834,6.08567768437183,3.76679530096111,4.22792442675283,10.9568467155972,7.08105259593879,1.66554880907831,1.61980213911861,2.09868563438444,5.8360500591274,3.83920414096069,5.51706547337439,17.9441342218757,9.53193131528499,10.7091913546964,3.19984845586813,6.65286915094793,2.29692785646008,1.7230479846363,2.80112602491656,3.99049180858385,2.01624103807945,3.32595765982957,4.44521471421742,2.46025915033828,31.6963362030877,6.06588401477677,7.97926297720763,7.35009682544529,0.418531630736908,1.5626706890476,1.0470474879476,11.1763982725893,1.36609096991689,1.45653105909346,4.90997590104751,4.76471576731718,4.40512205188036,0,5.23260375313072,4.17403747195497,6.02732687130279,3.3596741190087,4.31257693094915,5.87239121202077,5.07753499407941,3.6970317905671,1.54355661621568,2.86533439938757,4.64104883049698,7.08107613008592,6.87688273053643,8.87363964908651,3.04960078862219,0,1.3498495759221,0,0,2.99600110518405,4.99483796918021,7.25827286159344,7.1553147315796,6.94072372459561,11.7116903605559,8.39300455616131,7.96190194897201,5.55903731905771,11.0306254393203,29.731287869835,19.5361627270337,23.962619187974,8.17694983927202,7.593474419,8.33461392890816,15.0758819460746,26.449842671489,23.6837284054056,15.6153150301044,17.5117167382897,13.2343606535963,3.93776205332557,3.32514864469856,8.11620568364698,3.44169550792555,1.3599426674155,4.31762553310254,7.14754059192436,4.48026887097336,7.02222100658759,3.06774580640504,1.29893002301434,1.7666978725517,10.4224130634744,1.28326477414318,2.54805239706646,0,6.49473123033642,6.58735650235256,9.0994400102661,5.25245846707676,3.6251303710604,7.57054909230606,5.55153045651635,6.39377504455497,4.15107895060905,6.93324146542064,5.76184664964954,7.6656620711102,4.6967043869531,7.80836527367523,1.76922110389975,2.75003644910596,3.75430581382669,3.87900202508178,5.59175283654366,15.517382241612,11.9384622883669,3.57639877292028,3.83408398418945,0.599902730993408,2.28726408731516,26.6627338140584,20.1300265240196,14.9528679014309,28.8548371519179,30.6858548796397,22.0255327233134,23.2005006186893,5.90668310331835,4.35424397135326,5.81262344397452,4.41927897361595,8.97831056442656,12.644615743841,7.56260945182467,11.1521565198429,7.68812440410005,12.0426897067759,11.8064172945258,12.4177617954728,3.23351989399263,3.40390944302075,3.69497360744293,6.79506770525482,3.89266148915837,3.83077383174383,5.35033554660653,5.9710280045548,3.51106593656617,1.80143534980301,2.84163499395593,8.28503090142008,7.27030785941398,9.00310307305074,5.44512891845984,7.47704080640135,9.2560267732427,9.76642567951713,7.24338183778972,6.53885917256149,6.41783414662574,8.86504306027114,8.91756905004413,8.77199924551994,9.44065495751518,8.18659154438268,27.1274033647724,14.4066457330998,7.26921322564356,5.28901133327089,6.82522401712749,3.94802342162745,4.12375876230699,3.63030344322017,2.66853652613844,2.85338439168839,5.21981967698963,4.11747386810027,5.02670417600539,4.57599885694647,5.8489226135736,4.49409704327111,7.78096979548899,4.97853183135918,3.22435431620239,5.1411830674378,1.1270773567308,6.31319116320474,6.20647958936402,3.43665517462561,6.26041717530147,5.46157547524528,6.90794402502049,5.67626954040282,2.07516838961004,4.17112764290235,3.53806191203765,2.02375901146368,2.84004169943904,2.65294875727659,5.60176873919124,3.74004978686054,3.08056930872567,6.31491250332587,7.18841032636773,3.72140947668503,5.61667811606209,3.78868316920668,4.84373016509163,3.85954817090694,7.20537441649758,6.63219941196697,4.72598431681875,5.7713329163564,5.63256595892405,4.85768146581266,6.9032655856944,5.65887578787617,4.72905432318573,5.09368786192182,4.62418829106713,7.04612253277673,9.15230403889247,6.79850575333104,4.52373851817817,3.80733978673097,1.96705709207614,3.58717770196152,22.6376331882787,23.2079139452562,2.13115428989678,7.32165688892682,5.04813151066011,5.46614242015294,6.89354872744957,5.01834475700359,5.34716817797746,5.09537755419898,6.07216052512342,5.84511715822624,6.32460444714438,16.708708453934,7.80670468645477,5.1639025063504,5.70104357737516,9.56826713240706,2.65490276679926,4.37005145078967,7.55808892411878,3.58349651536206,1.47650946440386,7.07100840271033,4.13485269069154,6.90714086007261,6.06045543254026,6.32073515871632,6.32511651449993,2.06271086496374,19.4050575279659,11.7039711120352,5.43306471887569,8.78781843629528,10.995094485821,11.9507107793387,13.657568709976,6.39376393140658,0.938686832254841,6.99045833850607,3.30792597082443,3.13283880588812,3.06782410722221,5.12659861889325,5.49112782414428,2.79039529566604,4.66369338607761,20.5822085231666,2.39219233116994,2.68302928352189,2.22233432843654,2.44878994106098,1.91371918809435,3.20289442489132,6.96911562974807,5.17820373597535,5.38979897837253,3.81868247206045,5.852215881251,5.48962561242491,6.37231510848627,6.27264888043406,8.95286511359328,7.28267470478032,6.94289028092822,5.49687478166462,7.38805347763219,3.72803587852155,52.9871362363139,4.63501292736334,7.77654905148359,5.63908446197738,4.77891346867605,6.75824501963113,5.51579021635044,6.51021924219751,7.7595914875026,34.3049451572929,40.0361708698433,2.52808896502543,5.6763060281246,4.5192821152524,4.41730798124503,1.79026695667481,4.56967115996909,3.60586348559907,3.2491695978407,3.93769154797776,4.26758117267999,4.53717833115782,3.99577311032985,4.13710919053417,6.07759891344159,6.12172035761071,2.88581739386284,1.70456327558004,2.01461539636894,5.9888774149979,2.81523713176773,8.79127796482872,4.71610433973945,5.01572104035363,24.2843292325339,17.4923589872727,21.1971339972577,23.2001796163978,23.9778881919725,24.1726047164704,27.675922509504,23.4167025676595,24.469690085147,22.2636934053283,6.64239024538731,6.78342284781753,7.0000778359195,5.83456120963906,4.19226325255965,6.06683577885047,5.778414922842,3.91466608753899,7.70206103020357,5.55933865880354,6.08350319736575,6.41329560712659,7.11675456771106,6.6586158501064,6.03072424033939,7.62069906052918,6.60540657885676,7.13764115715709,6.1812885120496,6.62395140604788,4.4573002810104,7.27650805253284,7.15308569841963,3.48831399917588,7.0582035311498,7.10762706290083,6.76833499629258,6.57674278594607,5.43216455383447,6.17256498823512,6.8808310512021,6.2057823896605,6.54769669071503,6.66228417099654,4.62975866354739,8.24374907195222,4.91256377735358,5.80151845930405,3.25190164517034,4.85301122062934,6.02856372613096
|short_description=p1@Thnsl1
|short_description=p1@Thnsl1
}}
}}

Latest revision as of 09:00, 26 September 2015

Short description:p1@Thnsl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Thnsl1_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 0bp_to_ENSMUST00000054591, ENSMUST00000102952, ENSMUST00000138914, ENSMUST00000138965, NM_001001297, NM_177588, uc008inb.1, uc008inc.1_5end
EntrezGene:Thnsl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Thnsl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.08
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.71
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.65
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.56
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.54
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I623.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.23
Mouse Schwann, donor1.CNhs12507.11728-123D93.94
Mouse Schwann, donor2.CNhs12573.11746-123F93.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.49
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.25
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D77.57
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F56.93
adrenal gland, neonate N00.CNhs11191.1311-23C15.76
adrenal gland, neonate N25.CNhs11223.1377-27I37.67
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H17.81
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B215.52
cerebellum, neonate N30.CNhs11135.1395-42I211.94
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A426.66
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F114.95
cortex, adult.CNhs10473.12-14D528.85
cortex, neonate N30.CNhs11107.1392-42F230.69
diencephalon, adult.CNhs10482.20-12F222.03
diencephalon, neonate N30.CNhs11201.1388-42B223.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.35
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C68.98
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D411.15
eyeball, neonate N00.CNhs11207.633-15C67.69
eyeball, neonate N01.CNhs11140.1532-43E712.04
eyeball, neonate N02.CNhs11205.1551-44G811.81
eyeball, neonate N16.CNhs11188.777-19A212.42
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I65.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E98.29
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I99.00
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C87.48
heart, embryo E16.CNhs11021.457-17C69.26
heart, embryo E17.CNhs11025.479-18E59.77
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E36.54
heart, neonate N03.CNhs11221.1349-25I26.42
heart, neonate N10.CNhs11118.749-24G18.87
heart, neonate N16.CNhs11209.782-15G18.92
heart, neonate N20.CNhs11127.821-26I68.77
heart, neonate N25.CNhs11196.1351-25D39.44
heart, neonate N30.CNhs11202.1390-42D28.19
hippocampus, adult.CNhs10478.13-16E827.13
hippocampus, neonate N00.CNhs11228.627-43G114.41
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I56.83
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H43.63
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E37.78
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F85.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C76.21
kidney, neonate N00.CNhs11214.646-21G73.44
kidney, neonate N10.CNhs11206.758-6D56.26
kidney, neonate N20.CNhs11113.832-19I15.46
kidney, neonate N25.CNhs11122.1353-25F36.91
kidney, neonate N30.CNhs11203.1385-42H15.68
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F84.17
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B95.62
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B17.21
lung, embryo E12.CNhs10522.354-16G26.63
lung, embryo E14.CNhs10604.404-26F84.73
lung, embryo E15.CNhs11020.432-17C55.77
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A64.86
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E54.73
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E64.62
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C79.15
lung, neonate N30.CNhs11133.1394-42H26.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C222.64
medulla oblongata, neonate N30.CNhs11200.1396-42A323.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I77.81
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I45.70
oviduct, adult pregnant day01.CNhs10500.988-6G69.57
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F27.56
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G819.41
pituitary gland, embryo E12.CNhs11018.346-16E611.70
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B911.00
pituitary gland, embryo E16.CNhs11036.449-43F611.95
pituitary gland, embryo E17.CNhs11039.1265-44F513.66
pituitary gland, neonate N00.CNhs11190.1308-22E96.39
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H35.13
skin, neonate N06.CNhs11097.693-20I55.49
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C920.58
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.39
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D46.37
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C68.95
stomach, neonate N03.CNhs11193.1340-24B87.28
stomach, neonate N07.CNhs11210.718-18A96.94
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I17.39
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G552.99
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C57.78
testis, embryo E16.CNhs11033.470-26G55.64
testis, embryo E17.CNhs11029.486-18I54.78
testis, embryo E18.CNhs11027.503-18G56.76
testis, neonate N00.CNhs11189.1300-22B75.52
testis, neonate N07.CNhs11222.726-26I46.51
testis, neonate N10.CNhs11204.763-44D97.76
testis, neonate N20.CNhs11110.839-18H334.30
testis, neonate N30.CNhs11130.1391-42E240.04
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C54.42
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F83.61
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C43.94
thymus, neonate N07.CNhs11211.713-19D34.27
thymus, neonate N10.CNhs11194.748-24E44.54
thymus, neonate N20.CNhs11186.820-7A24.00
thymus, neonate N25.CNhs11125.1362-25G74.14
thymus, neonate N30.CNhs11132.1393-42G26.08
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F52.82
uterus, adult.CNhs10509.92-27E58.79
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.28
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.20
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.47
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.26
whole body, embryo E11.CNhs11014.324-5I86.64
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B46.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.19e-0823
neuroblast (sensu Vertebrata)1.19e-0823
neuron3.68e-0733
neuronal stem cell3.68e-0733
neuroblast3.68e-0733
electrically signaling cell3.68e-0733

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest5.86e-2492
neurectoderm1.92e-2164
neural plate1.92e-2164
presumptive neural plate1.92e-2164
regional part of nervous system1.17e-2054
neural tube2.59e-1952
neural rod2.59e-1952
future spinal cord2.59e-1952
neural keel2.59e-1952
pre-chordal neural plate2.01e-1849
central nervous system3.37e-1873
ecto-epithelium1.46e-1773
nervous system5.69e-1775
brain7.55e-1747
future brain7.55e-1747
regional part of brain2.60e-1646
anterior neural tube8.41e-1640
ectoderm-derived structure1.10e-1595
ectoderm1.10e-1595
presumptive ectoderm1.10e-1595
regional part of forebrain3.77e-1539
forebrain3.77e-1539
future forebrain3.77e-1539
gray matter4.16e-1434
brain grey matter7.87e-1229
regional part of telencephalon7.87e-1229
telencephalon7.87e-1229
tube2.35e-11114
anatomical conduit4.90e-11122
cerebral cortex2.35e-0821
cerebral hemisphere2.35e-0821
pallium2.35e-0821
regional part of cerebral cortex2.01e-0717
occipital lobe2.34e-0710
visual cortex2.34e-0710
neocortex2.34e-0710
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