FFCP PHASE1:Mm9::chr2:25118054..25118063,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:25118054..25118063,+ to FFCP PHASE1:Mm9::chr2:25118054..25118063,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=97031 | |EntrezGene=97031 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A2AI08 | |UniProt=A2AI08 | ||
|association_with_transcript=-54bp_to_ENSMUST00000051033,NM_175286,uc008ira.2_5end | |||
|cluster_id=chr2:25118054..25118063,+ | |||
|description=CAGE_peak_2_at_Tprn_5end | |||
|id=chr2:25118054..25118063,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.80e-10,6;CL:0000677,1.80e-10,6;CL:0000584,1.80e-10,6;CL:0000075,8.41e-09,7;CL:0002563,1.60e-08,9;CL:0002251,1.60e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.19e-10!75;UBERON:0001016!3.19e-10!75;UBERON:0001017!3.96e-10!73;UBERON:0005743!3.96e-10!73;UBERON:0000344!1.24e-09!15;UBERON:0001242!9.17e-09!13;UBERON:0000060!9.17e-09!13;UBERON:0001262!9.17e-09!13;UBERON:0004786!9.17e-09!13;UBERON:0000955!6.33e-08!50;UBERON:0006238!6.33e-08!50;UBERON:0002616!1.42e-07!49;UBERON:0001049!1.72e-07!52;UBERON:0005068!1.72e-07!52;UBERON:0006241!1.72e-07!52;UBERON:0007135!1.72e-07!52;UBERON:0000160!3.91e-07!43;UBERON:0007023!7.89e-07!51;UBERON:0000064!8.19e-07!99;UBERON:0000033!8.88e-07!63;UBERON:0004121!8.95e-07!102;UBERON:0000924!8.95e-07!102;UBERON:0006601!8.95e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.12e-20,31;UBERON:0000344,9.35e-16,15;UBERON:0005409,6.41e-15,47;UBERON:0001242,7.87e-14,13;UBERON:0001262,7.87e-14,13;UBERON:0004786,7.87e-14,13;UBERON:0011216,2.22e-10,194;UBERON:0000073,7.76e-09,54;UBERON:0001017,1.44e-08,73;UBERON:0003350,1.60e-08,9;UBERON:0004808,1.60e-08,9;UBERON:0001277,1.60e-08,9;UBERON:0004923,1.79e-08,24;UBERON:0001016,3.80e-08,75;UBERON:0000955,4.49e-08,47;UBERON:0006238,4.49e-08,47;UBERON:0001049,9.69e-08,52;UBERON:0005068,9.69e-08,52;UBERON:0006241,9.69e-08,52;UBERON:0007135,9.69e-08,52;UBERON:0007023,9.90e-08,51;UBERON:0002616,1.73e-07,46 | |||
|phase1_expression=0.160148847104794,11.1672130444596,4.09499315450582,9.67885476181856,14.5259761684441,3.3575854382378,3.50418960893289,0,0.563154888606667,0.70219357896598,0.171217968225505,0.159544317990673,0,0.174840804837995,0,0,0,0,0.137114433605739,0,1.10556277196391,0.297872853602656,0.522399578277871,1.75991665072747,1.37645568640302,2.8711598205751,5.1691439539089,4.30942465371778,3.99049180858385,2.26827116783938,3.10422714917427,0.635030673459631,0,0,0.866554859253824,1.66234645358492,0.408338712524738,0,0,0,0.588231488031014,0.683045484958446,0,0.377690453926732,0.506884656097573,0.183546752161682,0.782391344348039,0.65407546914134,2.85592037554813,1.94429899074283,1.25987779462826,1.43752564364972,0,0.725362142011344,0,0,0.286533439938757,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,1.92109152660777,0,0,0.210324961351382,0.856952953211411,1.10434270475807,0.244981598429908,0.0958454710182364,0,2.20231761998777,1.27687338085188,1.38245879930619,0.395658863190582,0.274462930807229,0.52091337055676,1.95428099300967,1.12552522006336,1.83357897332172,0.294628585473668,0.284743361598206,0.186399445825301,0.227178579999552,0.377857800533928,0.869593466105033,0,0,0,0,0,0.561777680527007,0.340860645156116,0,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.91347103775248,0.258937883647172,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0.988779870937496,0.289198713839823,0,0,0.441683036920787,0,3.72783522436244,3.22058876712702,3.77004072264219,3.83185582812887,0.11981512450592,0,0.254140454146129,2.09706895166752,5.94750783664214,0,1.04294592115366,1.79000820131231,2.49345653471472,2.59586020908412,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0.180062129805349,0,0.95251098811859,1.15302348256365,1.78033276663485,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0.438599962275997,0,0.671032093801859,2.3131894342054,0.514523061896422,7.26921322564356,2.11560453330835,0.213288250535234,0,0,0.605050573870028,1.33426826306922,0.760902504450237,1.89811624617805,0.823494773620054,1.25667604400135,1.59165177632921,1.16978452271472,2.69645822596266,1.51296634912286,1.7922714592893,0,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.379419222745544,0.147610147979602,0.470996183524124,0.616985819609003,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,4.49541651965817,6.44664276257117,0.163934945376675,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,1.28528526568723,0.567760340833074,0.178065603667255,0.162886959353576,1.97964147567043,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0.847328283455281,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,1.7488850197791,4.07935664423121,0.341741761595705,0,0,0,0,0,0.339956859987711,0.139951452323658,0.552799895217695,2.86401185404534,0.158167996790568,0,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0,1.83229159388821,1.16653475962614,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0,0,0.2604087696879,0.419437377702843,0.241584120826006,0.288030006257865,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.304827226619999,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0.448569283047378,0.335769232728157,0.19318959403219,0.563047426353546,0.73260649706906,1.50057865355346,0,1.12950368523413,1.38097570952153,0.572895513439397,0.171853182343688,1.37016503954128,1.5107877947794,2.02506750069542,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.564656282491984,0.25384382367503,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.441182838239031,0.231867835620421 | |phase1_expression=0.160148847104794,11.1672130444596,4.09499315450582,9.67885476181856,14.5259761684441,3.3575854382378,3.50418960893289,0,0.563154888606667,0.70219357896598,0.171217968225505,0.159544317990673,0,0.174840804837995,0,0,0,0,0.137114433605739,0,1.10556277196391,0.297872853602656,0.522399578277871,1.75991665072747,1.37645568640302,2.8711598205751,5.1691439539089,4.30942465371778,3.99049180858385,2.26827116783938,3.10422714917427,0.635030673459631,0,0,0.866554859253824,1.66234645358492,0.408338712524738,0,0,0,0.588231488031014,0.683045484958446,0,0.377690453926732,0.506884656097573,0.183546752161682,0.782391344348039,0.65407546914134,2.85592037554813,1.94429899074283,1.25987779462826,1.43752564364972,0,0.725362142011344,0,0,0.286533439938757,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,1.92109152660777,0,0,0.210324961351382,0.856952953211411,1.10434270475807,0.244981598429908,0.0958454710182364,0,2.20231761998777,1.27687338085188,1.38245879930619,0.395658863190582,0.274462930807229,0.52091337055676,1.95428099300967,1.12552522006336,1.83357897332172,0.294628585473668,0.284743361598206,0.186399445825301,0.227178579999552,0.377857800533928,0.869593466105033,0,0,0,0,0,0.561777680527007,0.340860645156116,0,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0,0.91347103775248,0.258937883647172,0,0.346970653532272,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0.988779870937496,0.289198713839823,0,0,0.441683036920787,0,3.72783522436244,3.22058876712702,3.77004072264219,3.83185582812887,0.11981512450592,0,0.254140454146129,2.09706895166752,5.94750783664214,0,1.04294592115366,1.79000820131231,2.49345653471472,2.59586020908412,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0.180062129805349,0,0.95251098811859,1.15302348256365,1.78033276663485,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0.284163499395593,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0.438599962275997,0,0.671032093801859,2.3131894342054,0.514523061896422,7.26921322564356,2.11560453330835,0.213288250535234,0,0,0.605050573870028,1.33426826306922,0.760902504450237,1.89811624617805,0.823494773620054,1.25667604400135,1.59165177632921,1.16978452271472,2.69645822596266,1.51296634912286,1.7922714592893,0,0.228497025219458,0,0.203651327845314,0,0.210407459670956,0.379419222745544,0.147610147979602,0.470996183524124,0.616985819609003,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0,0,0,0.289298117163023,0,0,0,0,4.49541651965817,6.44664276257117,0.163934945376675,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,1.28528526568723,0.567760340833074,0.178065603667255,0.162886959353576,1.97964147567043,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0.847328283455281,0,0,0.161464426695906,0.120625849856312,0.238744688006273,0,1.7488850197791,4.07935664423121,0.341741761595705,0,0,0,0,0,0.339956859987711,0.139951452323658,0.552799895217695,2.86401185404534,0.158167996790568,0,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0,1.83229159388821,1.16653475962614,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0,0,0.2604087696879,0.419437377702843,0.241584120826006,0.288030006257865,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0.147689527174577,0,0.304827226619999,0.100826185136841,0.194915761479505,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0.448569283047378,0.335769232728157,0.19318959403219,0.563047426353546,0.73260649706906,1.50057865355346,0,1.12950368523413,1.38097570952153,0.572895513439397,0.171853182343688,1.37016503954128,1.5107877947794,2.02506750069542,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.564656282491984,0.25384382367503,0.365855945745545,0.526139422875686,0.135804113845862,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0.441182838239031,0.231867835620421 | ||
|short_description=p2@Tprn | |||
}} | }} |
Latest revision as of 10:04, 26 September 2015
Short description: | p2@Tprn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tprn_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENSMUST00000051033, NM_175286, uc008ira.2_5end |
EntrezGene: | Tprn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.80e-10 | 6 |
gut absorptive cell | 1.80e-10 | 6 |
enterocyte | 1.80e-10 | 6 |
columnar/cuboidal epithelial cell | 8.41e-09 | 7 |
intestinal epithelial cell | 1.60e-08 | 9 |
epithelial cell of alimentary canal | 1.60e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.12e-20 | 31 |
mucosa | 9.35e-16 | 15 |
gastrointestinal system | 6.41e-15 | 47 |
intestinal mucosa | 7.87e-14 | 13 |
wall of intestine | 7.87e-14 | 13 |
gastrointestinal system mucosa | 7.87e-14 | 13 |
organ system subdivision | 2.22e-10 | 194 |
regional part of nervous system | 7.76e-09 | 54 |
central nervous system | 1.44e-08 | 73 |
epithelium of mucosa | 1.60e-08 | 9 |
gastrointestinal system epithelium | 1.60e-08 | 9 |
intestinal epithelium | 1.60e-08 | 9 |
organ component layer | 1.79e-08 | 24 |
nervous system | 3.80e-08 | 75 |
brain | 4.49e-08 | 47 |
future brain | 4.49e-08 | 47 |
neural tube | 9.69e-08 | 52 |
neural rod | 9.69e-08 | 52 |
future spinal cord | 9.69e-08 | 52 |
neural keel | 9.69e-08 | 52 |
adult organism | 9.90e-08 | 51 |
regional part of brain | 1.73e-07 | 46 |