FFCP PHASE1:Mm9::chr17:36053285..36053356,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:36053285..36053356,-
|short_description=p1@Mrps18b
|description=CAGE_peak_1_at_Mrps18b_5end
|association_with_transcript=0bp_to_ENSMUST00000025305,ENSMUST...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66973 | |EntrezGene=66973 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=Q99N84,Q542W5 | |UniProt=Q99N84,Q542W5 | ||
|association_with_transcript=0bp_to_ENSMUST00000025305,ENSMUST00000113782,ENSMUST00000174574,NM_025878,uc008cjg.1,uc008cjh.1_5end | |||
|cluster_id=chr17:36053285..36053356,- | |||
|description=CAGE_peak_1_at_Mrps18b_5end | |||
|id=chr17:36053285..36053356,- | |||
|ontology_enrichment_celltype=CL:0000219!2.00e-08!54;CL:0002320!4.56e-08!46;CL:0000134!4.56e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.00e-08,54;CL:0002320,4.56e-08,46;CL:0000134,4.56e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009854!3.90e-09!23;UBERON:0009856!3.90e-09!23;UBERON:0002107!1.12e-08!22;UBERON:0007499!1.12e-08!22;UBERON:0006925!1.12e-08!22;UBERON:0009497!1.12e-08!22;UBERON:0000015!1.12e-08!22;UBERON:0002423!1.12e-08!22;UBERON:0006235!1.12e-08!22;UBERON:0008835!1.12e-08!22;UBERON:0003894!1.12e-08!22;UBERON:0004161!1.12e-08!22;UBERON:0008836!1.12e-08!22;UBERON:0002365!1.34e-08!25;UBERON:0002330!1.34e-08!25;UBERON:0002384!4.56e-08!46;UBERON:0003914!5.14e-08!47;UBERON:0005172!3.61e-07!49;UBERON:0005173!3.61e-07!49;UBERON:0002417!3.61e-07!49;UBERON:0000916!3.61e-07!49;UBERON:0004119!7.41e-07!130;UBERON:0000925!7.41e-07!130;UBERON:0006595!7.41e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.90e-09,23;UBERON:0009856,3.90e-09,23;UBERON:0002107,1.12e-08,22;UBERON:0007499,1.12e-08,22;UBERON:0006925,1.12e-08,22;UBERON:0009497,1.12e-08,22;UBERON:0000015,1.12e-08,22;UBERON:0002423,1.12e-08,22;UBERON:0006235,1.12e-08,22;UBERON:0008835,1.12e-08,22;UBERON:0003894,1.12e-08,22;UBERON:0004161,1.12e-08,22;UBERON:0008836,1.12e-08,22;UBERON:0002365,1.34e-08,25;UBERON:0002330,1.34e-08,25;UBERON:0002384,4.56e-08,46;UBERON:0003914,5.14e-08,47;UBERON:0005256,6.20e-08,45;UBERON:0005172,3.61e-07,49;UBERON:0005173,3.61e-07,49;UBERON:0002417,3.61e-07,49;UBERON:0000916,3.61e-07,49 | |||
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| ||
|short_description=p1@Mrps18b | |||
}} | }} |
Latest revision as of 10:58, 26 September 2015
Short description: | p1@Mrps18b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mrps18b_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000025305, ENSMUST00000113782, ENSMUST00000174574, NM_025878, uc008cjg.1, uc008cjh.1_5end |
EntrezGene: | Mrps18b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.00e-08 | 54 |
connective tissue cell | 4.56e-08 | 46 |
mesenchymal cell | 4.56e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 3.90e-09 | 23 |
sac | 3.90e-09 | 23 |
liver | 1.12e-08 | 22 |
epithelial sac | 1.12e-08 | 22 |
digestive gland | 1.12e-08 | 22 |
epithelium of foregut-midgut junction | 1.12e-08 | 22 |
anatomical boundary | 1.12e-08 | 22 |
hepatobiliary system | 1.12e-08 | 22 |
foregut-midgut junction | 1.12e-08 | 22 |
hepatic diverticulum | 1.12e-08 | 22 |
liver primordium | 1.12e-08 | 22 |
septum transversum | 1.12e-08 | 22 |
liver bud | 1.12e-08 | 22 |
exocrine gland | 1.34e-08 | 25 |
exocrine system | 1.34e-08 | 25 |
connective tissue | 4.56e-08 | 46 |
epithelial tube | 5.14e-08 | 47 |
trunk mesenchyme | 6.20e-08 | 45 |
abdomen element | 3.61e-07 | 49 |
abdominal segment element | 3.61e-07 | 49 |
abdominal segment of trunk | 3.61e-07 | 49 |
abdomen | 3.61e-07 | 49 |