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FFCP PHASE1:Mm9::chr2:28388943..28389002,+: Difference between revisions

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{{FFCP|EntrezGene=19730|HGNC=|UniProt=Q3TWC1,Q3TXZ3,A2AK33,Q6ZPU1|association_with_transcript=0bp_to_NM_001145835,NM_001145836,uc008iyo.2,uc008iyp.2_5end|description=CAGE_peak_1_at_Ralgds_5end|id=chr2:28388943..28389002,+|ontology_enrichment_celltype=CL:0002319!5.02e-12!43;CL:0000221!1.46e-11!44;CL:0000133!1.46e-11!44;CL:0000055!6.21e-11!50;CL:0000540!8.30e-09!33;CL:0000047!8.30e-09!33;CL:0000031!8.30e-09!33;CL:0000404!8.30e-09!33;CL:0000393!6.91e-08!39;CL:0000211!6.91e-08!39;CL:0000107!1.98e-07!9|ontology_enrichment_celltype_v019_2=CL:0002319,4.99e-12,43;CL:0000221,1.45e-11,44;CL:0000133,1.45e-11,44;CL:0000540,8.27e-09,33;CL:0000047,8.27e-09,33;CL:0000031,8.27e-09,33;CL:0000404,8.27e-09,33;CL:0000393,6.88e-08,39;CL:0000211,6.88e-08,39;CL:0000107,1.98e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.63e-26!102;UBERON:0000924!3.63e-26!102;UBERON:0006601!3.63e-26!102;UBERON:0001017!2.44e-24!73;UBERON:0005743!2.44e-24!73;UBERON:0000073!4.03e-24!75;UBERON:0001016!4.03e-24!75;UBERON:0002346!4.08e-18!71;UBERON:0003075!4.08e-18!71;UBERON:0007284!4.08e-18!71;UBERON:0000033!4.43e-15!63;UBERON:0001049!5.86e-14!52;UBERON:0005068!5.86e-14!52;UBERON:0006241!5.86e-14!52;UBERON:0007135!5.86e-14!52;UBERON:0000955!1.15e-13!50;UBERON:0006238!1.15e-13!50;UBERON:0002616!2.85e-13!49;UBERON:0003056!2.33e-10!49;UBERON:0003080!7.12e-09!40;UBERON:0002780!2.17e-08!39;UBERON:0001890!2.17e-08!39;UBERON:0006240!2.17e-08!39;UBERON:0002020!9.01e-08!34;UBERON:0002410!1.98e-07!9;UBERON:0000153!8.11e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.82e-25,95;UBERON:0000924,2.82e-25,95;UBERON:0006601,2.82e-25,95;UBERON:0001017,2.41e-24,73;UBERON:0001016,3.98e-24,75;UBERON:0002346,1.57e-17,64;UBERON:0003075,1.57e-17,64;UBERON:0007284,1.57e-17,64;UBERON:0010371,3.67e-17,73;UBERON:0000073,4.99e-15,54;UBERON:0001049,5.82e-14,52;UBERON:0005068,5.82e-14,52;UBERON:0006241,5.82e-14,52;UBERON:0007135,5.82e-14,52;UBERON:0010314,3.79e-13,92;UBERON:0000955,4.74e-12,47;UBERON:0006238,4.74e-12,47;UBERON:0002616,1.14e-11,46;UBERON:0003056,2.31e-10,49;UBERON:0003080,7.09e-09,40;UBERON:0002780,2.16e-08,39;UBERON:0001890,2.16e-08,39;UBERON:0006240,2.16e-08,39;UBERON:0002020,8.98e-08,34;UBERON:0002410,1.98e-07,9|phase1_expression=14.733693933641,2.44282785347553,4.54999239389536,4.53696316960245,6.01074875935617,2.85394762250213,2.33612640595526,6.58528949552039,8.72890077340334,9.12851652655775,0.171217968225505,0.558405112967355,0.513602189793617,0.611942816932982,1.33243904726265,2.63217847606774,2.09868563438444,7.09789872056035,5.89592064504677,7.21462408056651,9.09963204616447,8.63831275447702,3.39559725880616,3.83981814704176,4.35877634027623,3.44539178469012,0.86152399231815,0.646413698057667,3.04037471130198,1.76421090831952,1.77384408524244,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.816677425049476,0.418531630736908,0,0,4.1176204162171,0.683045484958446,0,13.3450627054112,18.2478476195126,17.4369414553597,17.2126095756569,25.9449936092731,32.9529274101708,19.8318497055769,25.0575694709399,24.4379359420452,5.5368259999053,2.90144856804538,0.672187598284928,3.34437266846731,8.5960031981627,1.54701627683233,8.49729135610311,8.46385566835253,15.2119536841483,17.2810711355257,23.1216646988896,24.7472422252385,24.7216590641744,26.9982443679518,34.4540127096165,37.2691756161908,18.1456821539836,16.7407363531296,15.5640471400023,37.4202789568983,33.7928867655969,6.36952155917761,4.69642807989358,6.43453150627015,38.540558349786,35.4970799876822,36.0975353152172,8.44072241473241,5.48925861614458,4.68822033501084,40.7607178542016,30.9519435517424,40.7971321564083,24.4541725943144,20.786265396669,8.94717339961443,5.6794644999888,18.0616028655217,38.5519769973231,9.46466264679525,5.439770669662,0.539703191637817,1.29955283489534,0,7.44355426698285,9.37366774179318,9.35229616570328,9.18682893726885,6.05626705039726,6.41632387071589,15.2883143823987,0,0.432982082022428,0,0,3.88225191044804,21.2329064590681,18.2583831049734,13.8788261412909,11.8741536541735,9.4552353874984,9.79697163592047,15.521709341913,9.42499434972566,7.41584903203122,15.9059292611903,3.5384422077995,17.794353494215,8.61281921995535,4.363877278217,1.86391761218122,34.5481340473626,52.9900168238041,4.85368404896324,6.82946209683746,6.59893004092748,5.97230067243404,36.5489160147767,43.4625572677695,8.41884159156192,27.4642425903797,22.2472447877388,34.2850273523274,41.6960046084137,16.8034950353022,10.4501855312478,25.5249986018011,14.7309299120532,7.026503919986,12.8745178482745,9.90341713929421,13.2620239695429,21.6356067301223,18.3202620007335,27.0797983977616,17.5918292102531,6.03590380211958,8.13156144721623,12.3165786914764,16.6588756644957,12.5121262151519,14.626590993931,13.5816210029243,11.9420560091096,2.1066395619397,4.11756651383544,3.9782889915383,4.14251545071004,6.3322036194896,3.78130329068131,7.81257627431194,7.28027657465394,4.62801338662135,6.51095045301142,7.24338183778972,7.239451226764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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19730
|HGNC=
|TSSclassifier=NA
|UniProt=Q3TWC1,Q3TXZ3,A2AK33,Q6ZPU1
|association_with_transcript=0bp_to_NM_001145835,NM_001145836,uc008iyo.2,uc008iyp.2_5end
|cluster_id=chr2:28388943..28389002,+
|description=CAGE_peak_1_at_Ralgds_5end
|id=chr2:28388943..28389002,+
|ontology_enrichment_celltype=CL:0002319!5.02e-12!43;CL:0000221!1.46e-11!44;CL:0000133!1.46e-11!44;CL:0000055!6.21e-11!50;CL:0000540!8.30e-09!33;CL:0000047!8.30e-09!33;CL:0000031!8.30e-09!33;CL:0000404!8.30e-09!33;CL:0000393!6.91e-08!39;CL:0000211!6.91e-08!39;CL:0000107!1.98e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002319,4.99e-12,43;CL:0000221,1.45e-11,44;CL:0000133,1.45e-11,44;CL:0000540,8.27e-09,33;CL:0000047,8.27e-09,33;CL:0000031,8.27e-09,33;CL:0000404,8.27e-09,33;CL:0000393,6.88e-08,39;CL:0000211,6.88e-08,39;CL:0000107,1.98e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!3.63e-26!102;UBERON:0000924!3.63e-26!102;UBERON:0006601!3.63e-26!102;UBERON:0001017!2.44e-24!73;UBERON:0005743!2.44e-24!73;UBERON:0000073!4.03e-24!75;UBERON:0001016!4.03e-24!75;UBERON:0002346!4.08e-18!71;UBERON:0003075!4.08e-18!71;UBERON:0007284!4.08e-18!71;UBERON:0000033!4.43e-15!63;UBERON:0001049!5.86e-14!52;UBERON:0005068!5.86e-14!52;UBERON:0006241!5.86e-14!52;UBERON:0007135!5.86e-14!52;UBERON:0000955!1.15e-13!50;UBERON:0006238!1.15e-13!50;UBERON:0002616!2.85e-13!49;UBERON:0003056!2.33e-10!49;UBERON:0003080!7.12e-09!40;UBERON:0002780!2.17e-08!39;UBERON:0001890!2.17e-08!39;UBERON:0006240!2.17e-08!39;UBERON:0002020!9.01e-08!34;UBERON:0002410!1.98e-07!9;UBERON:0000153!8.11e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.82e-25,95;UBERON:0000924,2.82e-25,95;UBERON:0006601,2.82e-25,95;UBERON:0001017,2.41e-24,73;UBERON:0001016,3.98e-24,75;UBERON:0002346,1.57e-17,64;UBERON:0003075,1.57e-17,64;UBERON:0007284,1.57e-17,64;UBERON:0010371,3.67e-17,73;UBERON:0000073,4.99e-15,54;UBERON:0001049,5.82e-14,52;UBERON:0005068,5.82e-14,52;UBERON:0006241,5.82e-14,52;UBERON:0007135,5.82e-14,52;UBERON:0010314,3.79e-13,92;UBERON:0000955,4.74e-12,47;UBERON:0006238,4.74e-12,47;UBERON:0002616,1.14e-11,46;UBERON:0003056,2.31e-10,49;UBERON:0003080,7.09e-09,40;UBERON:0002780,2.16e-08,39;UBERON:0001890,2.16e-08,39;UBERON:0006240,2.16e-08,39;UBERON:0002020,8.98e-08,34;UBERON:0002410,1.98e-07,9
|phase1_expression=14.733693933641,2.44282785347553,4.54999239389536,4.53696316960245,6.01074875935617,2.85394762250213,2.33612640595526,6.58528949552039,8.72890077340334,9.12851652655775,0.171217968225505,0.558405112967355,0.513602189793617,0.611942816932982,1.33243904726265,2.63217847606774,2.09868563438444,7.09789872056035,5.89592064504677,7.21462408056651,9.09963204616447,8.63831275447702,3.39559725880616,3.83981814704176,4.35877634027623,3.44539178469012,0.86152399231815,0.646413698057667,3.04037471130198,1.76421090831952,1.77384408524244,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.816677425049476,0.418531630736908,0,0,4.1176204162171,0.683045484958446,0,13.3450627054112,18.2478476195126,17.4369414553597,17.2126095756569,25.9449936092731,32.9529274101708,19.8318497055769,25.0575694709399,24.4379359420452,5.5368259999053,2.90144856804538,0.672187598284928,3.34437266846731,8.5960031981627,1.54701627683233,8.49729135610311,8.46385566835253,15.2119536841483,17.2810711355257,23.1216646988896,24.7472422252385,24.7216590641744,26.9982443679518,34.4540127096165,37.2691756161908,18.1456821539836,16.7407363531296,15.5640471400023,37.4202789568983,33.7928867655969,6.36952155917761,4.69642807989358,6.43453150627015,38.540558349786,35.4970799876822,36.0975353152172,8.44072241473241,5.48925861614458,4.68822033501084,40.7607178542016,30.9519435517424,40.7971321564083,24.4541725943144,20.786265396669,8.94717339961443,5.6794644999888,18.0616028655217,38.5519769973231,9.46466264679525,5.439770669662,0.539703191637817,1.29955283489534,0,7.44355426698285,9.37366774179318,9.35229616570328,9.18682893726885,6.05626705039726,6.41632387071589,15.2883143823987,0,0.432982082022428,0,0,3.88225191044804,21.2329064590681,18.2583831049734,13.8788261412909,11.8741536541735,9.4552353874984,9.79697163592047,15.521709341913,9.42499434972566,7.41584903203122,15.9059292611903,3.5384422077995,17.794353494215,8.61281921995535,4.363877278217,1.86391761218122,34.5481340473626,52.9900168238041,4.85368404896324,6.82946209683746,6.59893004092748,5.97230067243404,36.5489160147767,43.4625572677695,8.41884159156192,27.4642425903797,22.2472447877388,34.2850273523274,41.6960046084137,16.8034950353022,10.4501855312478,25.5249986018011,14.7309299120532,7.026503919986,12.8745178482745,9.90341713929421,13.2620239695429,21.6356067301223,18.3202620007335,27.0797983977616,17.5918292102531,6.03590380211958,8.13156144721623,12.3165786914764,16.6588756644957,12.5121262151519,14.626590993931,13.5816210029243,11.9420560091096,2.1066395619397,4.11756651383544,3.9782889915383,4.14251545071004,6.3322036194896,3.78130329068131,7.81257627431194,7.28027657465394,4.62801338662135,6.51095045301142,7.24338183778972,7.23945122676451,6.7469538464527,10.0142153088248,11.9981838127866,10.8187990694746,10.7579556492615,13.0180226197561,34.9081314616451,12.8630765474106,9.58214470653014,1.85115396664481,9.38468302355029,6.96710015581316,7.21657783403723,6.85723983719365,6.22658522765637,4.56541502670142,6.16887780007865,3.95277491337626,4.52403375840485,6.96347652144028,4.874102177978,5.39291645192533,5.83572734661674,8.56307474993779,3.79335801906163,3.54170389090159,4.50830942692322,5.09128319613286,2.90928730751439,3.71719845418688,5.31186911843761,2.65698266363284,4.86696056308262,2.46794327843601,2.96452627087149,1.66845105716094,1.76903095601883,1.34917267430912,1.62288097110802,2.17059443777175,3.05551022137704,2.30156909960649,2.10775794807546,1.64736847912849,2.87536413054709,4.09355042435354,6.24075346229121,3.78868316920668,1.61457672169721,2.41221760681684,11.6394509804961,8.14813070613084,6.19266910479698,5.94107800213158,6.33663670378956,7.53778158488171,8.33152743101048,11.1226179278945,10.4039195110086,12.1805579306826,14.0320196418589,14.0922450655535,17.6138681503213,18.2257813812705,60.3165135757089,59.8296252200581,9.83528546038072,14.3487108078461,33.5550733074485,51.8075654737538,30.819769730815,13.1284882146274,70.042824710409,59.346689133089,74.3210722178156,48.7496347823206,43.8913387942316,50.3876224804122,65.5793336713329,58.1589157243511,59.688454469925,21.2072068838393,9.36804562374573,16.738166744722,23.6186091062685,13.3625799607754,7.96470830039777,8.49732226542435,5.13950046840077,4.52652191414155,8.56375489354241,5.53383266299069,9.04499026088774,8.72480950746013,9.26893183800275,6.32073515871632,6.32511651449993,6.18813259489121,28.937366489072,8.10274923140896,7.50280365939976,11.1455258216428,17.5566831305851,16.5883000369926,18.2649412868354,28.9241701658869,9.62154003061212,21.6068712281097,5.95426674748397,5.44124634706884,20.3445177636841,11.8213332859185,8.8335534562321,9.84845398470368,6.41257840585672,44.6874977845328,4.95525554313773,8.66824845445534,4.25947412950337,1.69531611304222,3.00727300986255,3.43167259809784,8.83887835968048,10.3564074719507,12.5761976162026,12.4107180341965,8.69923982348122,5.48962561242491,6.58832579012988,5.64538399239065,5.45906409365444,7.68726774393478,9.00922667406162,7.59092231753686,19.3126310204771,17.3975007664339,2.25477175473676,5.53211220362722,6.45288112782681,8.16694991045,8.78286799648571,8.44780627453891,11.0315804327009,4.1665403150064,5.45268591013696,1.44950472495604,2.88030006257865,2.21207784439725,6.68993210457542,5.34096977257102,8.31493267057888,5.72885426135941,5.96044064343795,5.16840432935866,6.05527061415767,2.62512769865184,2.74344503957999,1.91569751759997,2.92373642219257,3.2712026157712,2.92192255453922,8.16229381014761,1.99787358036658,0.897138566094757,2.68615386182526,15.0687883345109,6.38120416534019,6.95976172215607,9.21784030039983,4.51414893631827,25.413832917768,23.476587061866,25.2074025913335,33.3395173746754,21.9226406326606,19.6402413321322,18.2256075062588,14.8605997063993,14.0474146785103,18.1216109113137,7.36890167847654,12.768795948833,12.1220860085435,12.398442570483,11.319110781911,13.420576116851,11.7790765734856,13.1862436632892,19.2551525755089,16.4253187646468,11.660047794951,13.0152175556393,12.0797544636148,15.4300617295735,13.4398997356135,11.4310485907938,14.9490780468864,14.8540099757053,11.1263193216893,12.0703114510206,9.94320831917705,11.7134032065163,12.8755542571553,12.6451382470126,11.4813444106703,13.8767956942349,14.0854539112035,9.47050961176234,13.8520196122779,6.73370725989286,13.9989321386525,14.677167873959,11.867700251921,12.8597578184352,13.5034627686799,18.7357933453459,13.5680332898337,18.9086527562503,15.6856432296452,17.8679049486808,17.1582198359112
|short_description=p1@Ralgds
}}

Latest revision as of 12:01, 26 September 2015

Short description:p1@Ralgds
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ralgds_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_001145835, NM_001145836, uc008iyo.2, uc008iyp.2_5end
EntrezGene:Ralgds
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ralgds

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.90
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.35
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.25
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.44
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B832.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C319.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C425.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.28
Mouse Meningeal cells, donor3.CNhs12109.11639-122D123.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C724.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E724.72
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D227.00
Mouse Microglia, donor1.CNhs12629.11718-123C834.45
Mouse Microglia, donor2.CNhs12634.11736-123E837.27
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.74
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.56
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F137.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D533.79
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D338.54
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F335.50
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.10
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E440.76
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I640.80
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D624.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.79
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.95
Mouse Schwann, donor1.CNhs12507.11728-123D95.68
Mouse Schwann, donor2.CNhs12573.11746-123F918.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G338.55
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.88
accessory axillary lymph node, adult.CNhs10475.1063-29H921.23
adrenal gland, adult.CNhs10508.49-24D718.26
adrenal gland, embryo E14.CNhs11038.406-44C513.88
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I19.46
adrenal gland, embryo E18.CNhs11026.1262-18F59.80
adrenal gland, neonate N00.CNhs11191.1311-23C115.52
adrenal gland, neonate N25.CNhs11223.1377-27I39.42
amnion, adult pregnant day17.5.CNhs10488.583-22A87.42
aorta, adult.CNhs10498.46-23H115.91
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F517.79
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B234.55
cerebellum, neonate N30.CNhs11135.1395-42I252.99
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.97
corpora quadrigemina, adult.CNhs10501.16-22A436.55
corpus striatum, adult.CNhs10487.19-21D843.46
corpus striatum, neonate N00.CNhs11226.630-43F18.42
cortex, adult.CNhs10473.12-14D527.46
cortex, neonate N30.CNhs11107.1392-42F222.25
diencephalon, adult.CNhs10482.20-12F234.29
diencephalon, neonate N30.CNhs11201.1388-42B241.70
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.80
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.45
epididymis, adult.CNhs10490.58-23B225.52
eyeball, adult.CNhs10484.31-12G414.73
eyeball, embryo E12.CNhs11016.345-16C67.03
eyeball, embryo E14.CNhs10521.399-16E212.87
eyeball, embryo E15.CNhs10593.426-16C99.90
eyeball, embryo E17.CNhs11023.1261-18D413.26
eyeball, neonate N00.CNhs11207.633-15C621.64
eyeball, neonate N01.CNhs11140.1532-43E718.32
eyeball, neonate N02.CNhs11205.1551-44G827.08
eyeball, neonate N16.CNhs11188.777-19A217.59
forelimb, embryo E11.CNhs10596.335-25E26.04
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E212.32
forelimb, embryo E14.CNhs10577.413-26A816.66
forelimb, embryo E15.CNhs11007.437-20E712.51
forelimb, embryo E17.CNhs10598.1517-43C414.63
forelimb, embryo E18.CNhs11008.1520-43B513.58
gonad, embryo E13.CNhs11044.1564-45I611.94
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F56.33
heart, embryo E13.CNhs11013.376-3I93.78
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C64.63
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G37.24
heart, neonate N00.CNhs11213.639-21E37.24
heart, neonate N03.CNhs11221.1349-25I26.75
heart, neonate N10.CNhs11118.749-24G110.01
heart, neonate N16.CNhs11209.782-15G112.00
heart, neonate N20.CNhs11127.821-26I610.82
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D213.02
hippocampus, adult.CNhs10478.13-16E834.91
hippocampus, neonate N00.CNhs11228.627-43G112.86
intestinal mucosa, adult.CNhs10506.860-29I39.58
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I59.38
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D87.22
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D36.23
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G18.56
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F83.54
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G73.72
kidney, neonate N10.CNhs11206.758-6D55.31
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B111.64
lung, embryo E12.CNhs10522.354-16G28.15
lung, embryo E14.CNhs10604.404-26F86.19
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B66.34
lung, embryo E17.CNhs10605.480-44A67.54
lung, embryo E18.CNhs10583.1287-20I68.33
lung, neonate N00.CNhs11224.640-42C611.12
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A312.18
lung, neonate N10.CNhs11219.750-23E614.03
lung, neonate N20.CNhs11109.822-18A414.09
lung, neonate N25.CNhs11119.1359-25C717.61
lung, neonate N30.CNhs11133.1394-42H218.23
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A160.32
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A159.83
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H214.35
medulla oblongata, adult.CNhs10477.17-12C233.56
medulla oblongata, neonate N30.CNhs11200.1396-42A351.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C730.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.13
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E170.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E259.35
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E374.32
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D748.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D843.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D950.39
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D465.58
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D558.16
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D659.69
olfactory brain, adult.CNhs10489.18-22I921.21
ovary, adult.CNhs10507.91-2I79.37
ovary, embryo E18.CNhs11040.505-44H716.74
ovary, neonate N00.CNhs11217.1299-22I423.62
oviduct, adult pregnant day01.CNhs10500.988-6G613.36
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G38.56
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G828.94
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C77.50
pituitary gland, embryo E14.CNhs11037.398-44A511.15
pituitary gland, embryo E15.CNhs10592.427-16B917.56
pituitary gland, embryo E16.CNhs11036.449-43F616.59
pituitary gland, embryo E17.CNhs11039.1265-44F518.26
pituitary gland, neonate N00.CNhs11190.1308-22E928.92
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G321.61
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C35.44
skin, neonate N00.CNhs11124.650-25G420.34
skin, neonate N03.CNhs11215.662-22H311.82
skin, neonate N06.CNhs11097.693-20I58.83
skin, neonate N10.CNhs11108.762-6C49.85
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C944.69
spleen, adult.CNhs10465.25-2G24.96
spleen, embryo E16.CNhs11035.461-43C18.67
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H13.01
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.58
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E38.70
stomach, embryo E15.CNhs10603.1252-16G85.49
stomach, embryo E16.CNhs11022.459-17D46.59
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B87.69
stomach, neonate N07.CNhs11210.718-18A99.01
stomach, neonate N25.CNhs11104.1355-25E47.59
stomach, neonate N30.CNhs11134.1386-42I119.31
submandibular gland, adult.CNhs10469.59-29C117.40
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F55.53
testis, embryo E15.CNhs11034.443-27C56.45
testis, embryo E16.CNhs11033.470-26G58.17
testis, embryo E17.CNhs11029.486-18I58.78
testis, embryo E18.CNhs11027.503-18G58.45
testis, neonate N00.CNhs11189.1300-22B711.03
testis, neonate N07.CNhs11222.726-26I44.17
testis, neonate N10.CNhs11204.763-44D95.45
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I46.69
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C58.31
thymus, embryo E17.CNhs10581.478-18C15.73
thymus, embryo E18.CNhs10595.1273-19G45.96
thymus, neonate N02.CNhs11181.1541-43F85.17
thymus, neonate N03.CNhs11137.2104-43C76.06
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D32.74
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G73.27
thymus, neonate N30.CNhs11132.1393-42G22.92
tongue, adult.CNhs10499.32-1B48.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E415.07
uterus, adult pregnant day19.CNhs10497.590-15F56.38
uterus, adult.CNhs10509.92-27E56.96
vagina, adult.CNhs10502.89-27D59.22
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.41
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A223.48
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A325.21
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I87.37
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H212.12
whole body, embryo E14.5.CNhs10578.420-27D212.40
whole body, embryo E14.CNhs10519.395-14B111.32
whole body, embryo E16.CNhs10514.453-14F213.42
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.43
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G514.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.85
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.88
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.09
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.86
whole body, embryo E17.5.CNhs10513.490-9F913.50
whole body, embryo E17.CNhs10517.475-3I518.74
whole body, embryo E18.CNhs10516.493-3B313.57
whole body, neonate N00.CNhs10525.657-19C218.91
whole body, neonate N01.CNhs10576.659-23C615.69
whole body, neonate N06.CNhs10515.692-21D117.87
whole body, neonate N10.CNhs10518.761-6B417.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell4.99e-1243
ectodermal cell1.45e-1144
neurectodermal cell1.45e-1144
neuron8.27e-0933
neuronal stem cell8.27e-0933
neuroblast8.27e-0933
electrically signaling cell8.27e-0933
electrically responsive cell6.88e-0839
electrically active cell6.88e-0839
autonomic neuron1.98e-079
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