FFCP PHASE1:Mm9::chr10:86241745..86241754,+: Difference between revisions
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{{FFCP|EntrezGene=103466|HGNC=|MCL_coexpression_id=1|UniProt=Q3UHB1|association_with_transcript=0bp_to_ENSMUST00000099396,NM_175331,uc007gqn.1_5end|description=CAGE_peak_4_at_Nt5dc3_5end|id=chr10:86241745..86241754,+|ontology_enrichment_celltype=CL:0000117!1.08e-11!23;CL:0000337!1.08e-11!23;CL:0000393!2.57e-08!39;CL:0000211!2.57e-08!39;CL:0000540!7.88e-08!33;CL:0000047!7.88e-08!33;CL:0000031!7.88e-08!33;CL:0000404!7.88e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.60e-16,23;CL:0000337,8.60e-16,23;CL:0000393,1.34e-09,39;CL:0000211,1.34e-09,39;CL:0000540,3.45e-09,33;CL:0000047,3.45e-09,33;CL:0000031,3.45e-09,33;CL:0000404,3.45e-09,33;CL:0002319,9.45e-08,43;CL:0000221,2.24e-07,44;CL:0000133,2.24e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.25e-19!52;UBERON:0005068!7.25e-19!52;UBERON:0006241!7.25e-19!52;UBERON:0007135!7.25e-19!52;UBERON:0000073!7.55e-19!75;UBERON:0001016!7.55e-19!75;UBERON:0000955!7.57e-19!50;UBERON:0006238!7.57e-19!50;UBERON:0002616!2.68e-18!49;UBERON:0001017!3.25e-18!73;UBERON:0005743!3.25e-18!73;UBERON:0002020!2.65e-16!34;UBERON:0003080!7.47e-16!40;UBERON:0002780!2.99e-15!39;UBERON:0001890!2.99e-15!39;UBERON:0006240!2.99e-15!39;UBERON:0004121!3.24e-15!102;UBERON:0000924!3.24e-15!102;UBERON:0006601!3.24e-15!102;UBERON:0002346!6.06e-15!71;UBERON:0003075!6.06e-15!71;UBERON:0007284!6.06e-15!71;UBERON:0000033!1.07e-14!63;UBERON:0002791!1.77e-14!29;UBERON:0003528!1.77e-14!29;UBERON:0001893!1.77e-14!29;UBERON:0003056!2.82e-12!49;UBERON:0000956!2.82e-10!21;UBERON:0001869!2.82e-10!21;UBERON:0000203!2.82e-10!21;UBERON:0000025!3.85e-09!114;UBERON:0007811!3.85e-09!86;UBERON:0004111!1.34e-08!122;UBERON:0002619!1.36e-08!17;UBERON:0002021!2.75e-07!10;UBERON:0000411!2.75e-07!10;UBERON:0001950!2.75e-07!10;UBERON:0000153!2.87e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.49e-27,54;UBERON:0001049,3.67e-25,52;UBERON:0005068,3.67e-25,52;UBERON:0006241,3.67e-25,52;UBERON:0007135,3.67e-25,52;UBERON:0001016,2.33e-24,75;UBERON:0001017,1.77e-23,73;UBERON:0000955,2.51e-22,47;UBERON:0006238,2.51e-22,47;UBERON:0002020,3.61e-22,34;UBERON:0002616,1.40e-21,46;UBERON:0003080,2.84e-20,40;UBERON:0003528,1.33e-19,29;UBERON:0002791,1.33e-19,29;UBERON:0001893,1.33e-19,29;UBERON:0002780,1.93e-19,39;UBERON:0001890,1.93e-19,39;UBERON:0006240,1.93e-19,39;UBERON:0002346,1.55e-18,64;UBERON:0003075,1.55e-18,64;UBERON:0007284,1.55e-18,64;UBERON:0004121,3.43e-17,95;UBERON:0000924,3.43e-17,95;UBERON:0006601,3.43e-17,95;UBERON:0003056,1.90e-15,49;UBERON:0010371,2.08e-15,73;UBERON:0010314,2.19e-15,92;UBERON:0000956,1.06e-13,21;UBERON:0001869,1.06e-13,21;UBERON:0000203,1.06e-13,21;UBERON:0002619,2.43e-11,17;UBERON:0000025,1.13e-09,114;UBERON:0002021,1.30e-09,10;UBERON:0000411,1.30e-09,10;UBERON:0001950,1.30e-09,10;UBERON:0004111,7.08e-08,122;UBERON:0002420,4.05e-07,8;UBERON:0007245,4.05e-07,8;UBERON:0010009,4.05e-07,8;UBERON:0010011,4.05e-07,8;UBERON:0000454,4.05e-07,8|phase1_expression=0.960893082628764,0,0,0,0,0.33575854382378,0,0.516493293766305,2.67498572088167,4.21316147379588,1.19852577757853,1.7549874978974,0.513602189793617,0.34968160967599,0,0.202475267389826,0,0.315462165358238,0.685572168028694,0.42438965179803,1.53077922271926,0.198581902401771,0.522399578277871,0,0.22940928106717,0,0,0,0,0.252030129759931,0,1.27006134691926,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0.588231488031014,0,0,1.38486499773135,1.62203089951223,1.83546752161682,0,0.436050312760893,0.439372365468944,1.1665793944457,0.55994568650145,1.43752564364972,0.335565212115473,0,1.34437519656986,0.257259436035947,0.85960031981627,1.03134418455488,5.46254444320914,4.23192783417626,3.80298842103708,1.69422266034566,0,0,0,0.7104801149461,0.299600110518405,0,2.07379224616955,1.35005938331691,1.68259969081106,1.14260393761521,1.76694832761291,2.20483438586917,1.0543001812006,1.83843757322004,6.60695285996332,5.49055553766307,4.91540906419979,3.29715719325485,4.02545631850602,4.16730696445408,1.67509799400829,2.8138130501584,3.97275444219706,1.47314292736834,2.70506193518296,2.98239113320481,1.51452386666368,1.28471652181535,0.289864488701678,0,2.03991400112325,0.539703191637817,0.649776417447669,0.448026887097336,0.280888840263504,0.852151612890289,0.779358013808606,0.70667914902068,0.704217098883403,3.84979432242953,0,0,0.432982082022428,0.253359865475099,0,0.68510327831436,0.258937883647172,1.7813056687779,0.346970653532272,0.608930956624282,0.691846491768175,0.753613202763113,1.64624189989987,1.63366568728578,0.494389935468748,0.86759614151947,0.884610551949874,1.29413479957927,0.662524555381181,0.969750506270444,0,1.75668478206928,2.30391377494801,0,1.31796636956512,0,0.762421362438388,4.04434726393021,4.11750542536764,2.01046963380583,7.82209440865244,7.16003280524926,4.77912502486988,6.16516799657479,0.611036183101898,0.248813941220186,2.0217820674694,0.420883711772948,0.390361328888111,0.459804208866946,0.540186389416048,0.150704817835715,0.408218994907967,1.02490976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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=103466 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UHB1 | |||
|association_with_transcript=0bp_to_ENSMUST00000099396,NM_175331,uc007gqn.1_5end | |||
|cluster_id=chr10:86241745..86241754,+ | |||
|description=CAGE_peak_4_at_Nt5dc3_5end | |||
|id=chr10:86241745..86241754,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.08e-11!23;CL:0000337!1.08e-11!23;CL:0000393!2.57e-08!39;CL:0000211!2.57e-08!39;CL:0000540!7.88e-08!33;CL:0000047!7.88e-08!33;CL:0000031!7.88e-08!33;CL:0000404!7.88e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.60e-16,23;CL:0000337,8.60e-16,23;CL:0000393,1.34e-09,39;CL:0000211,1.34e-09,39;CL:0000540,3.45e-09,33;CL:0000047,3.45e-09,33;CL:0000031,3.45e-09,33;CL:0000404,3.45e-09,33;CL:0002319,9.45e-08,43;CL:0000221,2.24e-07,44;CL:0000133,2.24e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.25e-19!52;UBERON:0005068!7.25e-19!52;UBERON:0006241!7.25e-19!52;UBERON:0007135!7.25e-19!52;UBERON:0000073!7.55e-19!75;UBERON:0001016!7.55e-19!75;UBERON:0000955!7.57e-19!50;UBERON:0006238!7.57e-19!50;UBERON:0002616!2.68e-18!49;UBERON:0001017!3.25e-18!73;UBERON:0005743!3.25e-18!73;UBERON:0002020!2.65e-16!34;UBERON:0003080!7.47e-16!40;UBERON:0002780!2.99e-15!39;UBERON:0001890!2.99e-15!39;UBERON:0006240!2.99e-15!39;UBERON:0004121!3.24e-15!102;UBERON:0000924!3.24e-15!102;UBERON:0006601!3.24e-15!102;UBERON:0002346!6.06e-15!71;UBERON:0003075!6.06e-15!71;UBERON:0007284!6.06e-15!71;UBERON:0000033!1.07e-14!63;UBERON:0002791!1.77e-14!29;UBERON:0003528!1.77e-14!29;UBERON:0001893!1.77e-14!29;UBERON:0003056!2.82e-12!49;UBERON:0000956!2.82e-10!21;UBERON:0001869!2.82e-10!21;UBERON:0000203!2.82e-10!21;UBERON:0000025!3.85e-09!114;UBERON:0007811!3.85e-09!86;UBERON:0004111!1.34e-08!122;UBERON:0002619!1.36e-08!17;UBERON:0002021!2.75e-07!10;UBERON:0000411!2.75e-07!10;UBERON:0001950!2.75e-07!10;UBERON:0000153!2.87e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.49e-27,54;UBERON:0001049,3.67e-25,52;UBERON:0005068,3.67e-25,52;UBERON:0006241,3.67e-25,52;UBERON:0007135,3.67e-25,52;UBERON:0001016,2.33e-24,75;UBERON:0001017,1.77e-23,73;UBERON:0000955,2.51e-22,47;UBERON:0006238,2.51e-22,47;UBERON:0002020,3.61e-22,34;UBERON:0002616,1.40e-21,46;UBERON:0003080,2.84e-20,40;UBERON:0003528,1.33e-19,29;UBERON:0002791,1.33e-19,29;UBERON:0001893,1.33e-19,29;UBERON:0002780,1.93e-19,39;UBERON:0001890,1.93e-19,39;UBERON:0006240,1.93e-19,39;UBERON:0002346,1.55e-18,64;UBERON:0003075,1.55e-18,64;UBERON:0007284,1.55e-18,64;UBERON:0004121,3.43e-17,95;UBERON:0000924,3.43e-17,95;UBERON:0006601,3.43e-17,95;UBERON:0003056,1.90e-15,49;UBERON:0010371,2.08e-15,73;UBERON:0010314,2.19e-15,92;UBERON:0000956,1.06e-13,21;UBERON:0001869,1.06e-13,21;UBERON:0000203,1.06e-13,21;UBERON:0002619,2.43e-11,17;UBERON:0000025,1.13e-09,114;UBERON:0002021,1.30e-09,10;UBERON:0000411,1.30e-09,10;UBERON:0001950,1.30e-09,10;UBERON:0004111,7.08e-08,122;UBERON:0002420,4.05e-07,8;UBERON:0007245,4.05e-07,8;UBERON:0010009,4.05e-07,8;UBERON:0010011,4.05e-07,8;UBERON:0000454,4.05e-07,8 | |||
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| |||
|short_description=p4@Nt5dc3 | |||
}} |
Latest revision as of 12:48, 26 September 2015
Short description: | p4@Nt5dc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Nt5dc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000099396, NM_175331, uc007gqn.1_5end |
EntrezGene: | Nt5dc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.60e-16 | 23 |
neuroblast (sensu Vertebrata) | 8.60e-16 | 23 |
electrically responsive cell | 1.34e-09 | 39 |
electrically active cell | 1.34e-09 | 39 |
neuron | 3.45e-09 | 33 |
neuronal stem cell | 3.45e-09 | 33 |
neuroblast | 3.45e-09 | 33 |
electrically signaling cell | 3.45e-09 | 33 |
neural cell | 9.45e-08 | 43 |
ectodermal cell | 2.24e-07 | 44 |
neurectodermal cell | 2.24e-07 | 44 |