FFCP PHASE1:Mm9::chr7:29600161..29600176,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:29600161..29600176,+
|short_description=p5@Hnrnpl
|description=CAGE_peak_5_at_Hnrnpl_5end
|association_with_transcript=36bp_to_ENSMUST00000172841_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15388 | |EntrezGene=15388 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENSMUST00000172841_5end | |||
|cluster_id=chr7:29600161..29600176,+ | |||
|description=CAGE_peak_5_at_Hnrnpl_5end | |||
|id=chr7:29600161..29600176,+ | |||
|ontology_enrichment_celltype=CL:0000034!9.08e-18!97;CL:0000723!5.45e-17!91;CL:0000048!5.45e-17!91;CL:0000144!3.89e-14!121;CL:0000012!3.89e-14!121;CL:0002371!1.93e-13!118;CL:0000548!1.54e-12!115;CL:0000004!1.54e-12!115;CL:0000255!1.54e-12!115;CL:0000055!2.38e-10!50;CL:0000117!2.86e-10!23;CL:0000337!2.86e-10!23;CL:0002319!3.28e-09!43;CL:0000393!4.14e-09!39;CL:0000211!4.14e-09!39;CL:0000221!9.81e-09!44;CL:0000133!9.81e-09!44;CL:0000540!5.89e-08!33;CL:0000047!5.89e-08!33;CL:0000031!5.89e-08!33;CL:0000404!5.89e-08!33;CL:0000219!2.82e-07!54;CL:0002321!3.72e-07!70;CL:0000220!3.72e-07!70;CL:0002320!7.16e-07!46;CL:0000134!7.16e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,3.06e-19,97;CL:0000723,1.32e-18,91;CL:0000048,1.32e-18,91;CL:0000117,6.04e-13,23;CL:0000337,6.04e-13,23;CL:0002319,5.93e-12,43;CL:0000221,2.12e-11,44;CL:0000133,2.12e-11,44;CL:0000393,8.96e-11,39;CL:0000211,8.96e-11,39;CL:0000540,6.86e-10,33;CL:0000047,6.86e-10,33;CL:0000031,6.86e-10,33;CL:0000404,6.86e-10,33;CL:0002321,9.49e-09,70;CL:0000219,2.95e-08,54;CL:0002320,2.15e-07,46;CL:0000134,2.15e-07,46;CL:0000738,7.01e-07,17;CL:0002087,7.01e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.00e-09!34;UBERON:0002384!7.16e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.95e-11,34;UBERON:0001017,5.21e-09,73;UBERON:0001016,7.64e-09,75;UBERON:0003528,3.52e-08,29;UBERON:0002791,3.52e-08,29;UBERON:0001893,3.52e-08,29;UBERON:0000956,1.32e-07,21;UBERON:0001869,1.32e-07,21;UBERON:0000203,1.32e-07,21;UBERON:0002384,2.15e-07,46;UBERON:0000073,4.60e-07,54 | |||
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| ||
|short_description=p5@Hnrnpl | |||
}} | }} |
Latest revision as of 13:18, 26 September 2015
Short description: | p5@Hnrnpl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Hnrnpl_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENSMUST00000172841_5end |
EntrezGene: | Hnrnpl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 3.06e-19 | 97 |
somatic stem cell | 1.32e-18 | 91 |
multi fate stem cell | 1.32e-18 | 91 |
CNS neuron (sensu Vertebrata) | 6.04e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-13 | 23 |
neural cell | 5.93e-12 | 43 |
ectodermal cell | 2.12e-11 | 44 |
neurectodermal cell | 2.12e-11 | 44 |
electrically responsive cell | 8.96e-11 | 39 |
electrically active cell | 8.96e-11 | 39 |
neuron | 6.86e-10 | 33 |
neuronal stem cell | 6.86e-10 | 33 |
neuroblast | 6.86e-10 | 33 |
electrically signaling cell | 6.86e-10 | 33 |
embryonic cell | 9.49e-09 | 70 |
motile cell | 2.95e-08 | 54 |
connective tissue cell | 2.15e-07 | 46 |
mesenchymal cell | 2.15e-07 | 46 |
leukocyte | 7.01e-07 | 17 |
nongranular leukocyte | 7.01e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gray matter | 3.95e-11 | 34 |
central nervous system | 5.21e-09 | 73 |
nervous system | 7.64e-09 | 75 |
brain grey matter | 3.52e-08 | 29 |
regional part of telencephalon | 3.52e-08 | 29 |
telencephalon | 3.52e-08 | 29 |
cerebral cortex | 1.32e-07 | 21 |
cerebral hemisphere | 1.32e-07 | 21 |
pallium | 1.32e-07 | 21 |
connective tissue | 2.15e-07 | 46 |
regional part of nervous system | 4.60e-07 | 54 |