FFCP PHASE1:Mm9::chr6:122258987..122259036,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:122258987..122259036,+
|short_description=p1@M6pr
|description=CAGE_peak_1_at_M6pr_5end
|association_with_transcript=0bp_to_ENSMUST00000123093,NM_010749,uc...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17113 | |EntrezGene=17113 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=710 | |||
|TSSclassifier=NA | |||
|UniProt=P24668,Q3UKQ5 | |UniProt=P24668,Q3UKQ5 | ||
|association_with_transcript=0bp_to_ENSMUST00000123093,NM_010749,uc009dow.1_5end | |||
|cluster_id=chr6:122258987..122259036,+ | |||
|description=CAGE_peak_1_at_M6pr_5end | |||
|id=chr6:122258987..122259036,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.50e-14!66;CL:0000219!5.04e-13!54;CL:0002320!3.87e-12!46;CL:0000134!3.87e-12!46;CL:0000144!1.44e-07!121;CL:0000012!1.44e-07!121;CL:0000988!1.76e-07!32;CL:0002032!1.76e-07!32;CL:0000037!1.76e-07!32;CL:0000566!1.76e-07!32;CL:0000837!1.76e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.04e-13,54;CL:0002320,3.87e-12,46;CL:0000134,3.87e-12,46;CL:0000988,1.76e-07,32;CL:0002032,1.76e-07,32;CL:0000037,1.76e-07,32;CL:0000837,1.76e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.87e-12!46;UBERON:0002405!3.27e-11!70;UBERON:0004119!3.13e-10!130;UBERON:0000925!3.13e-10!130;UBERON:0006595!3.13e-10!130;UBERON:0001007!8.28e-10!128;UBERON:0001555!8.28e-10!128;UBERON:0007026!8.28e-10!128;UBERON:0004921!4.94e-09!126;UBERON:0004185!4.94e-09!126;UBERON:0003104!1.38e-08!131;UBERON:0009142!1.38e-08!131;UBERON:0005256!3.78e-08!47;UBERON:0002193!5.56e-07!48;UBERON:0000490!5.83e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.87e-12,46;UBERON:0004119,3.55e-11,118;UBERON:0000925,3.55e-11,118;UBERON:0006595,3.55e-11,118;UBERON:0001007,9.69e-11,116;UBERON:0001555,9.69e-11,116;UBERON:0007026,9.69e-11,116;UBERON:0004921,6.42e-10,114;UBERON:0005256,1.33e-08,45;UBERON:0002100,1.00e-07,90;UBERON:0003104,3.05e-07,61;UBERON:0009142,3.05e-07,61;UBERON:0002193,5.56e-07,48;UBERON:0002405,5.56e-07,48;UBERON:0000490,5.83e-07,66 | |||
|phase1_expression=26.2644109251862,35.2465161715755,42.7699285026164,26.3143863836942,15.5277676283368,42.9770936094438,39.2469236200483,61.850071928515,268.061726976773,241.320526637975,186.6275853658,171.90900263495,49.8194124099809,52.1899802441414,50.6326837959807,46.3668362322701,40.5745889314325,53.6285681109004,47.3044795939799,47.9560306531774,43.2870346868945,52.822786038871,41.0083668948129,66.2368630364704,76.6226998764348,48.2354849856617,49.1068675621345,51.0666821465557,83.2302577218918,65.2758036078221,77.6056787293567,21.5910428976275,18.4519436275371,15.8481681015439,55.748362611996,69.1536124691328,59.6174520286118,53.1535171035873,75.7895284188086,63.8698967648034,47.0585190424811,47.8131839470912,60.6887941288942,39.028013572429,41.1590340751229,43.6841270144802,32.8604364626176,28.1252451730776,45.6947260087701,51.9127830528337,33.3167683468363,44.5632949531412,57.3816512717458,47.1485392307374,41.3395372945231,37.0453587891764,49.2837516694662,43.8321278435826,12.7459370341547,12.1667925232568,15.8457850876545,30.1571633541528,30.2360230677787,104.388367204642,83.0647744556259,110.834897931592,40.745615030503,30.7374644257244,14.4128561108784,17.010748229793,15.3537221786509,19.4242669394586,27.8294361599033,12.4940615199253,14.4726661237537,21.1420320920305,38.540558349786,43.1583202727934,45.9283534436168,17.5408762681158,14.6380229763855,18.2319679694866,53.3239528092638,57.964548833263,51.6458077485618,18.5616008848411,22.067610523861,15.8439528951505,85.1162413064989,55.318381998167,44.9289957487601,67.1130624045481,76.8367607089758,73.3996340627431,58.4798775702902,57.347441548459,42.9759925603161,54.3672729024004,60.0105670632627,53.3542757510614,32.6756733881899,52.6138557398703,40.7688383530633,35.5533351576666,78.1532658050483,71.7008419294529,80.3783867573505,49.6699876777911,43.2426265690777,52.548517228948,33.135697412332,31.0554787878384,52.1191023798692,52.6022015528653,44.5661200044321,68.4882922746731,49.1917985791404,31.2334610947009,43.3459170455438,29.2797998404811,31.3594956213759,29.0925151881133,37.2783522436244,34.255353250351,32.8831329697124,50.5804969313011,85.9074442707448,76.1876468361628,96.9545832567484,34.601637702514,37.5150494311274,13.8219787324151,31.8098505951866,28.640131220997,38.6485762880782,33.4217001919581,34.116186889856,43.2936257723124,47.0064330686635,101.853858249053,16.7855371421888,21.380895712313,18.3663372401456,17.6324636867787,22.2479352224842,20.1138540847214,25.2057639065671,42.4273528011986,18.7544153851573,12.4810012910761,14.7798944297717,17.9740500590611,19.4633074457919,25.4224081561182,24.4880742325453,21.4957008163973,96.9054198492264,86.4688967905443,133.556844715929,19.2626968458017,15.4787199587523,20.7071370680167,15.6251525486239,17.7087808572663,21.4431286913456,18.1376476905318,19.3156849007726,26.2722020326131,22.0510198884064,26.5951291808134,22.2128538155645,23.8305979503292,23.7114124514335,25.9018388207517,28.8097229532854,15.0240734073755,37.9981600431368,45.2210468994661,17.9162130449597,20.2045904518582,28.2219740295384,30.6558957427481,35.8028650590241,44.3225708842263,44.6057317851841,49.5743853719273,49.0103657160526,53.9172039231519,52.0554112608051,36.8515957548231,56.8443071170446,43.8110801159608,28.4501851429623,23.192448059775,13.5249282807697,19.1432248174595,29.2868255623115,35.5588606843915,51.9804335161395,63.0295331872901,69.8644338894118,66.5110713538505,57.5118096549069,33.702711354651,34.0047061545841,39.5757317797343,36.9205420927075,37.1412826018722,40.7401362850272,34.5235364940973,39.0745896527835,55.7359668771805,30.1913233707445,51.3554507782535,49.3019523521006,55.3147742704175,57.7659671540557,61.2703272131476,51.9156464368159,20.8440552947533,19.5557971730431,20.8786455503481,21.3568125942537,25.1259386162724,31.8978478787258,43.7099371201469,35.9408128562115,45.8431907572964,40.1826017016867,49.6505843588686,55.7772491426843,49.3253289762954,102.538073078705,219.19399057894,37.8658490224658,41.9423854383193,36.1238827472532,42.3134188597853,41.1476712895455,23.4797962300067,20.5080342620567,14.8366722832723,18.9572590004863,27.4814117645435,22.5026660823218,22.3630459323178,21.4549671887694,21.9191893433484,22.5314033429518,25.0630626809009,42.4400854772723,28.4904965867608,29.6454266023508,43.3871423417768,30.5313818181915,26.220308704738,34.7672090509464,29.2337873621642,23.9194533233426,28.5914687587853,32.0451083528594,37.4439741361831,37.075727352011,26.5470876666085,44.2758156014995,26.8152412445286,46.2997863825152,17.1058039329745,21.8616175592855,31.9362182197073,22.3448694389265,25.8634785523002,27.6442354611563,29.2286351150015,41.7715640353404,54.8645063537294,50.0599463584764,26.5466867235783,22.1206264573391,25.0298638451847,26.5006603686963,24.6211349617592,46.6369338607761,43.5749459724698,43.4012037226546,26.6239059672557,39.0760452750092,46.1502719661493,43.195375959844,47.3570818537502,72.2408327473885,69.2759689002107,70.758386587865,32.4588010125139,17.24031165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| |phase1_expression=26.2644109251862,35.2465161715755,42.7699285026164,26.3143863836942,15.5277676283368,42.9770936094438,39.2469236200483,61.850071928515,268.061726976773,241.320526637975,186.6275853658,171.90900263495,49.8194124099809,52.1899802441414,50.6326837959807,46.3668362322701,40.5745889314325,53.6285681109004,47.3044795939799,47.9560306531774,43.2870346868945,52.822786038871,41.0083668948129,66.2368630364704,76.6226998764348,48.2354849856617,49.1068675621345,51.0666821465557,83.2302577218918,65.2758036078221,77.6056787293567,21.5910428976275,18.4519436275371,15.8481681015439,55.748362611996,69.1536124691328,59.6174520286118,53.1535171035873,75.7895284188086,63.8698967648034,47.0585190424811,47.8131839470912,60.6887941288942,39.028013572429,41.1590340751229,43.6841270144802,32.8604364626176,28.1252451730776,45.6947260087701,51.9127830528337,33.3167683468363,44.5632949531412,57.3816512717458,47.1485392307374,41.3395372945231,37.0453587891764,49.2837516694662,43.8321278435826,12.7459370341547,12.1667925232568,15.8457850876545,30.1571633541528,30.2360230677787,104.388367204642,83.0647744556259,110.834897931592,40.745615030503,30.7374644257244,14.4128561108784,17.010748229793,15.3537221786509,19.4242669394586,27.8294361599033,12.4940615199253,14.4726661237537,21.1420320920305,38.540558349786,43.1583202727934,45.9283534436168,17.5408762681158,14.6380229763855,18.2319679694866,53.3239528092638,57.964548833263,51.6458077485618,18.5616008848411,22.067610523861,15.8439528951505,85.1162413064989,55.318381998167,44.9289957487601,67.1130624045481,76.8367607089758,73.3996340627431,58.4798775702902,57.347441548459,42.9759925603161,54.3672729024004,60.0105670632627,53.3542757510614,32.6756733881899,52.6138557398703,40.7688383530633,35.5533351576666,78.1532658050483,71.7008419294529,80.3783867573505,49.6699876777911,43.2426265690777,52.548517228948,33.135697412332,31.0554787878384,52.1191023798692,52.6022015528653,44.5661200044321,68.4882922746731,49.1917985791404,31.2334610947009,43.3459170455438,29.2797998404811,31.3594956213759,29.0925151881133,37.2783522436244,34.255353250351,32.8831329697124,50.5804969313011,85.9074442707448,76.1876468361628,96.9545832567484,34.601637702514,37.5150494311274,13.8219787324151,31.8098505951866,28.640131220997,38.6485762880782,33.4217001919581,34.116186889856,43.2936257723124,47.0064330686635,101.853858249053,16.7855371421888,21.380895712313,18.3663372401456,17.6324636867787,22.2479352224842,20.1138540847214,25.2057639065671,42.4273528011986,18.7544153851573,12.4810012910761,14.7798944297717,17.9740500590611,19.4633074457919,25.4224081561182,24.4880742325453,21.4957008163973,96.9054198492264,86.4688967905443,133.556844715929,19.2626968458017,15.4787199587523,20.7071370680167,15.6251525486239,17.7087808572663,21.4431286913456,18.1376476905318,19.3156849007726,26.2722020326131,22.0510198884064,26.5951291808134,22.2128538155645,23.8305979503292,23.7114124514335,25.9018388207517,28.8097229532854,15.0240734073755,37.9981600431368,45.2210468994661,17.9162130449597,20.2045904518582,28.2219740295384,30.6558957427481,35.8028650590241,44.3225708842263,44.6057317851841,49.5743853719273,49.0103657160526,53.9172039231519,52.0554112608051,36.8515957548231,56.8443071170446,43.8110801159608,28.4501851429623,23.192448059775,13.5249282807697,19.1432248174595,29.2868255623115,35.5588606843915,51.9804335161395,63.0295331872901,69.8644338894118,66.5110713538505,57.5118096549069,33.702711354651,34.0047061545841,39.5757317797343,36.9205420927075,37.1412826018722,40.7401362850272,34.5235364940973,39.0745896527835,55.7359668771805,30.1913233707445,51.3554507782535,49.3019523521006,55.3147742704175,57.7659671540557,61.2703272131476,51.9156464368159,20.8440552947533,19.5557971730431,20.8786455503481,21.3568125942537,25.1259386162724,31.8978478787258,43.7099371201469,35.9408128562115,45.8431907572964,40.1826017016867,49.6505843588686,55.7772491426843,49.3253289762954,102.538073078705,219.19399057894,37.8658490224658,41.9423854383193,36.1238827472532,42.3134188597853,41.1476712895455,23.4797962300067,20.5080342620567,14.8366722832723,18.9572590004863,27.4814117645435,22.5026660823218,22.3630459323178,21.4549671887694,21.9191893433484,22.5314033429518,25.0630626809009,42.4400854772723,28.4904965867608,29.6454266023508,43.3871423417768,30.5313818181915,26.220308704738,34.7672090509464,29.2337873621642,23.9194533233426,28.5914687587853,32.0451083528594,37.4439741361831,37.075727352011,26.5470876666085,44.2758156014995,26.8152412445286,46.2997863825152,17.1058039329745,21.8616175592855,31.9362182197073,22.3448694389265,25.8634785523002,27.6442354611563,29.2286351150015,41.7715640353404,54.8645063537294,50.0599463584764,26.5466867235783,22.1206264573391,25.0298638451847,26.5006603686963,24.6211349617592,46.6369338607761,43.5749459724698,43.4012037226546,26.6239059672557,39.0760452750092,46.1502719661493,43.195375959844,47.3570818537502,72.2408327473885,69.2759689002107,70.758386587865,32.4588010125139,17.24031165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| ||
|short_description=p1@M6pr | |||
}} | }} |
Latest revision as of 14:29, 26 September 2015
Short description: | p1@M6pr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_M6pr_5end |
Coexpression cluster: | MCL_coexpression_mm9:710 |
Association with transcript: | 0bp_to_ENSMUST00000123093, NM_010749, uc009dow.1_5end |
EntrezGene: | M6pr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 5.04e-13 | 54 |
connective tissue cell | 3.87e-12 | 46 |
mesenchymal cell | 3.87e-12 | 46 |
hematopoietic cell | 1.76e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.76e-07 | 32 |
hematopoietic stem cell | 1.76e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.76e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.87e-12 | 46 |
endoderm-derived structure | 3.55e-11 | 118 |
endoderm | 3.55e-11 | 118 |
presumptive endoderm | 3.55e-11 | 118 |
digestive system | 9.69e-11 | 116 |
digestive tract | 9.69e-11 | 116 |
primitive gut | 9.69e-11 | 116 |
subdivision of digestive tract | 6.42e-10 | 114 |
trunk mesenchyme | 1.33e-08 | 45 |
trunk | 1.00e-07 | 90 |
mesenchyme | 3.05e-07 | 61 |
entire embryonic mesenchyme | 3.05e-07 | 61 |
hemolymphoid system | 5.56e-07 | 48 |
immune system | 5.56e-07 | 48 |
unilaminar epithelium | 5.83e-07 | 66 |