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FFCP PHASE1:Mm9::chr2:32583202..32583232,+: Difference between revisions

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{{FFCP|EntrezGene=27387|HGNC=|MCL_coexpression_id=94|UniProt=Q9QZS8|association_with_transcript=0bp_to_ENSMUST00000113242,ENSMUST00000124133,NM_001252547,uc008jgr.1_5end|description=CAGE_peak_1_at_Sh2d3c_5end|id=chr2:32583202..32583232,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!8.01e-10!66;UBERON:0002048!8.06e-10!14;UBERON:0000117!8.06e-10!14;UBERON:0000171!8.06e-10!14;UBERON:0000170!8.06e-10!14;UBERON:0005597!8.06e-10!14;UBERON:0000118!8.06e-10!14;UBERON:0005177!1.12e-09!85;UBERON:0005157!1.50e-09!27;UBERON:0005153!2.61e-08!17;UBERON:0000468!7.75e-08!333;UBERON:0007100!3.84e-07!18;UBERON:0000948!3.84e-07!18;UBERON:0005498!3.84e-07!18;UBERON:0004140!3.84e-07!18;UBERON:0009881!3.84e-07!18;UBERON:0004141!3.84e-07!18;UBERON:0003084!3.84e-07!18;UBERON:0007005!3.84e-07!18;UBERON:0004139!3.84e-07!18;UBERON:0004291!3.84e-07!18;UBERON:0000926!5.32e-07!193;UBERON:0004120!5.32e-07!193;UBERON:0006603!5.32e-07!193;UBERON:0000466!9.49e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.78e-11,79;UBERON:0009569,6.19e-10,66;UBERON:0002048,7.13e-10,14;UBERON:0000117,7.13e-10,14;UBERON:0000171,7.13e-10,14;UBERON:0000170,7.13e-10,14;UBERON:0005597,7.13e-10,14;UBERON:0000118,7.13e-10,14;UBERON:0005153,3.44e-08,17;UBERON:0005157,6.98e-08,20;UBERON:0007100,3.53e-07,18;UBERON:0000948,3.53e-07,18;UBERON:0005498,3.53e-07,18;UBERON:0004140,3.53e-07,18;UBERON:0009881,3.53e-07,18;UBERON:0004141,3.53e-07,18;UBERON:0003084,3.53e-07,18;UBERON:0007005,3.53e-07,18;UBERON:0004139,3.53e-07,18;UBERON:0004291,3.53e-07,18;UBERON:0002100,5.13e-07,90|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.934450562382103,0.516493293766305,0.140788722151667,0,0.171217968225505,0,0.171200729931206,0.611942816932982,1.99865857089398,1.41732687172878,0,0.473193248037357,0.274228867211478,0.42438965179803,13.9470995847754,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,5.85944283031671,0.7813353445238,1.0470474879476,5.29408339227913,4.78131839470912,3.88408282424923,0.125896817975577,0.202753862439029,0,0,1.74420125104357,0,0,0.419959264876088,0,0.167782606057736,0,1.68046899571232,1.54355661621568,4.58453503902011,1.54701627683233,2.02316460859598,4.7609188134483,6.33831403506179,0.677689064138264,0,4.49949858640699,4.94433181283487,2.8419204597844,2.99600110518405,1.92109152660777,3.62913643079672,4.72520784160917,3.36519938162211,4.85606673486466,3.3130281142742,1.34739879136449,2.77951865952885,2.75765635983006,6.60695285996332,2.29837208553338,1.38245879930619,3.42904348098504,2.74462930807229,2.08365348222704,2.23346399201105,2.25105044012672,1.98637722109853,2.94628585473668,3.13217697758026,2.23679334990361,0.681535739998656,0.982430281388212,57.6830332516339,24.9522924324602,0.679971333707751,1.61910957491345,2.59910566979068,2.24013443548668,7.44355426698285,0.511290967734173,0,0.35333957451034,0.563373679106722,0,0,0,0,0.253359865475099,0,6.2801133845483,12.4290184150642,13.9535610720935,12.3174582003956,10.6562917409249,6.91846491768175,9.19408107370998,14.4634109776917,11.8126595849895,6.42706916109372,20.6777080395474,2.65383165584962,11.1619126463712,10.6003928860989,5.33362778448744,1.86391761218122,2.04946557908083,1.25668024088073,3.0654846625031,0.958520996047362,1.79970819298022,0.762421362438388,2.69623150928681,1.83000241127451,1.50785222535437,2.78118912307642,3.06858548796397,2.70124457927428,2.75810147215188,10.3876151127323,7.34001126599549,1.26361379216837,2.73574412652416,10.4096354370163,6.89706313300419,5.76198815377118,5.27466862425003,6.5995404176788,5.89323113310309,4.31027932974753,4.65666067330228,10.1316956678436,9.07709184805532,9.14945845652534,7.89104636739269,11.9560317167007,9.4028084960985,7.81972118350185,15.5246728118425,0,0,0.284163499395593,22.9909607514407,18.2930326785255,14.4049649168812,22.7274946161802,20.2667158699826,16.3523139660621,17.2075119115302,17.4377710909752,20.0836388871532,15.1395061920402,33.9826650643727,33.9678311997136,29.5323974599171,19.9790604914856,34.7594624589363,1.68231958851302,3.39585220851639,1.32167513193519,0.793351699990633,13.8637362847902,13.9342003116263,10.8248667510558,8.26902450955704,7.33847544688072,6.65789691393957,3.79623249235609,6.91735609840846,5.02670417600539,7.75930240960488,5.45899443933536,0.898819408654221,1.72910439899755,3.18626037206988,13.845756769575,11.7675967988021,14.6520056375005,14.0519416213267,14.9343415119072,20.0588444886311,18.7812515259044,17.5656076095727,10.9899109488962,12.5865107200237,5.92905254174298,4.50481785433454,4.71741588271687,2.9232074610031,3.65148218499305,3.61765739628625,4.83789118384698,9.49397253587675,7.13394997810156,5.49122826376163,17.2521847832825,17.8627654880882,11.2333562321242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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=27387
|HGNC=
|MCL_coexpression_id=94
|TSSclassifier=NA
|UniProt=Q9QZS8
|association_with_transcript=0bp_to_ENSMUST00000113242,ENSMUST00000124133,NM_001252547,uc008jgr.1_5end
|cluster_id=chr2:32583202..32583232,+
|description=CAGE_peak_1_at_Sh2d3c_5end
|id=chr2:32583202..32583232,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!8.01e-10!66;UBERON:0002048!8.06e-10!14;UBERON:0000117!8.06e-10!14;UBERON:0000171!8.06e-10!14;UBERON:0000170!8.06e-10!14;UBERON:0005597!8.06e-10!14;UBERON:0000118!8.06e-10!14;UBERON:0005177!1.12e-09!85;UBERON:0005157!1.50e-09!27;UBERON:0005153!2.61e-08!17;UBERON:0000468!7.75e-08!333;UBERON:0007100!3.84e-07!18;UBERON:0000948!3.84e-07!18;UBERON:0005498!3.84e-07!18;UBERON:0004140!3.84e-07!18;UBERON:0009881!3.84e-07!18;UBERON:0004141!3.84e-07!18;UBERON:0003084!3.84e-07!18;UBERON:0007005!3.84e-07!18;UBERON:0004139!3.84e-07!18;UBERON:0004291!3.84e-07!18;UBERON:0000926!5.32e-07!193;UBERON:0004120!5.32e-07!193;UBERON:0006603!5.32e-07!193;UBERON:0000466!9.49e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0005177,4.78e-11,79;UBERON:0009569,6.19e-10,66;UBERON:0002048,7.13e-10,14;UBERON:0000117,7.13e-10,14;UBERON:0000171,7.13e-10,14;UBERON:0000170,7.13e-10,14;UBERON:0005597,7.13e-10,14;UBERON:0000118,7.13e-10,14;UBERON:0005153,3.44e-08,17;UBERON:0005157,6.98e-08,20;UBERON:0007100,3.53e-07,18;UBERON:0000948,3.53e-07,18;UBERON:0005498,3.53e-07,18;UBERON:0004140,3.53e-07,18;UBERON:0009881,3.53e-07,18;UBERON:0004141,3.53e-07,18;UBERON:0003084,3.53e-07,18;UBERON:0007005,3.53e-07,18;UBERON:0004139,3.53e-07,18;UBERON:0004291,3.53e-07,18;UBERON:0002100,5.13e-07,90
|phase1_expression=1.28119077683835,0.348975407639361,0.454999239389536,0,0,0.16787927191189,0.934450562382103,0.516493293766305,0.140788722151667,0,0.171217968225505,0,0.171200729931206,0.611942816932982,1.99865857089398,1.41732687172878,0,0.473193248037357,0.274228867211478,0.42438965179803,13.9470995847754,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,5.85944283031671,0.7813353445238,1.0470474879476,5.29408339227913,4.78131839470912,3.88408282424923,0.125896817975577,0.202753862439029,0,0,1.74420125104357,0,0,0.419959264876088,0,0.167782606057736,0,1.68046899571232,1.54355661621568,4.58453503902011,1.54701627683233,2.02316460859598,4.7609188134483,6.33831403506179,0.677689064138264,0,4.49949858640699,4.94433181283487,2.8419204597844,2.99600110518405,1.92109152660777,3.62913643079672,4.72520784160917,3.36519938162211,4.85606673486466,3.3130281142742,1.34739879136449,2.77951865952885,2.75765635983006,6.60695285996332,2.29837208553338,1.38245879930619,3.42904348098504,2.74462930807229,2.08365348222704,2.23346399201105,2.25105044012672,1.98637722109853,2.94628585473668,3.13217697758026,2.23679334990361,0.681535739998656,0.982430281388212,57.6830332516339,24.9522924324602,0.679971333707751,1.61910957491345,2.59910566979068,2.24013443548668,7.44355426698285,0.511290967734173,0,0.35333957451034,0.563373679106722,0,0,0,0,0.253359865475099,0,6.2801133845483,12.4290184150642,13.9535610720935,12.3174582003956,10.6562917409249,6.91846491768175,9.19408107370998,14.4634109776917,11.8126595849895,6.42706916109372,20.6777080395474,2.65383165584962,11.1619126463712,10.6003928860989,5.33362778448744,1.86391761218122,2.04946557908083,1.25668024088073,3.0654846625031,0.958520996047362,1.79970819298022,0.762421362438388,2.69623150928681,1.83000241127451,1.50785222535437,2.78118912307642,3.06858548796397,2.70124457927428,2.75810147215188,10.3876151127323,7.34001126599549,1.26361379216837,2.73574412652416,10.4096354370163,6.89706313300419,5.76198815377118,5.27466862425003,6.5995404176788,5.89323113310309,4.31027932974753,4.65666067330228,10.1316956678436,9.07709184805532,9.14945845652534,7.89104636739269,11.9560317167007,9.4028084960985,7.81972118350185,15.5246728118425,0,0,0.284163499395593,22.9909607514407,18.2930326785255,14.4049649168812,22.7274946161802,20.2667158699826,16.3523139660621,17.2075119115302,17.4377710909752,20.0836388871532,15.1395061920402,33.9826650643727,33.9678311997136,29.5323974599171,19.9790604914856,34.7594624589363,1.68231958851302,3.39585220851639,1.32167513193519,0.793351699990633,13.8637362847902,13.9342003116263,10.8248667510558,8.26902450955704,7.33847544688072,6.65789691393957,3.79623249235609,6.91735609840846,5.02670417600539,7.75930240960488,5.45899443933536,0.898819408654221,1.72910439899755,3.18626037206988,13.845756769575,11.7675967988021,14.6520056375005,14.0519416213267,14.9343415119072,20.0588444886311,18.7812515259044,17.5656076095727,10.9899109488962,12.5865107200237,5.92905254174298,4.50481785433454,4.71741588271687,2.9232074610031,3.65148218499305,3.61765739628625,4.83789118384698,9.49397253587675,7.13394997810156,5.49122826376163,17.2521847832825,17.8627654880882,11.2333562321242,10.8608917517258,6.27890947326693,8.20153986317724,56.1649698106478,11.7484675297701,21.3484119139054,16.8047634917436,19.2446003596572,24.7909261013887,37.6108952599902,47.8077437251607,27.5861502185834,36.5416737920479,41.4582398509466,55.8773903180667,35.2277363006427,47.7341893318988,4.52373851817817,4.89515115436839,5.90117127622843,10.2096596132751,4.33486592967038,2.69586879162067,1.63934945376675,20.4501451035542,7.2566890465739,9.76096860741596,6.24727853425117,1.19484398976276,1.33679204449436,0.283076530788832,11.334699646897,8.47541987942804,8.30104333687699,2.24924921495265,8.65834519770439,12.8207234640424,15.4742611385897,8.08353602565424,1.32745138339963,12.1390318077491,12.3952658355548,10.7504895460862,12.1073776081117,8.9156192903739,12.6629863652428,9.45187696641514,8.91243445961803,8.53299246426703,6.32511651449993,2.06271086496374,7.83011093233712,6.66226047915848,8.66703181344455,9.43082954139006,11.3497749531055,8.20496560969525,11.8475294833527,21.312546438022,10.3255551548033,10.3797714723272,0.882113592219848,6.43056386471772,8.23468576149118,5.48847616846218,6.2073618881631,3.61109979439135,2.62332752966866,3.52308073819968,3.75915937755276,27.2430665711454,23.3345104485837,7.91147519419702,4.37421528707281,7.77845788902177,3.39956859987711,1.81936888020755,4.97519905695926,6.68269432610579,11.0717597753397,10.9792512248498,8.4244165841005,5.64538399239065,5.02233896616208,5.39457385539283,5.70308844504818,3.92633912976044,3.24037433229482,1.86401793926078,0,15.8487538806618,15.8840150838814,15.3616438791798,10.9785849956071,9.2925869019928,9.27122185301456,8.46328501485676,6.08184197669123,0.966336483304024,2.59227005632079,2.21207784439725,8.71718425747706,5.23825881540619,3.89762468933385,3.58053391334963,2.98022032171897,1.32214994471966,0.886137163047463,1.51449674922221,1.752756553065,1.00826185136841,1.26695244961678,1.15454209968395,1.8700304349051,7.9355634265324,11.0992976687032,11.5730875026224,7.21903850365537,4.44336066274038,13.7008207079363,4.57879060668163,1.92931541171159,1.50471631210609,2.82375921308533,2.76195141904306,2.29158205375759,2.23409137046794,1.37016503954128,1.5107877947794,0.675022500231806,0.45032120322422,2.26571204492102,0,8.09541311156578,12.768795948833,8.19521307619844,7.05009479498053,7.75568701723535,7.16989682955055,8.66762238426299,8.65347240403356,12.5158491740808,8.33900798820532,8.36481689637791,8.86543804514558,10.0196412992774,9.60377286073039,10.0512070672323,16.1939855036245,9.618399053423,11.5745532278223,7.82963211526283,8.24313952752625,7.20025430009372,10.8260241757196,7.86839426826159,7.41266724824875,9.59915680236372,8.79991922073436,7.50004688778368,7.62902163169744,8.82726739998101,10.1005608898393,9.72807148618228,8.27437651954733,9.82154503607254,10.5357052006457,8.48789088317022,10.7418548513317,10.7608539884888,13.1071342969462,19.1288332068843,15.8825821766051,12.5208631235028
|short_description=p1@Sh2d3c
}}

Latest revision as of 14:43, 26 September 2015

Short description:p1@Sh2d3c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sh2d3c_5end
Coexpression cluster:MCL_coexpression_mm9:94
Association with transcript: 0bp_to_ENSMUST00000113242, ENSMUST00000124133, NM_001252547, uc008jgr.1_5end
EntrezGene:Sh2d3c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sh2d3c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.78
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G357.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.28
accessory axillary lymph node, adult.CNhs10475.1063-29H912.43
adrenal gland, adult.CNhs10508.49-24D713.95
adrenal gland, embryo E14.CNhs11038.406-44C512.32
adrenal gland, embryo E16.CNhs11004.1254-43D610.66
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F59.19
adrenal gland, neonate N00.CNhs11191.1311-23C114.46
adrenal gland, neonate N25.CNhs11223.1377-27I311.81
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H120.68
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F511.16
bone (os femoris), neonate N16.CNhs11225.1525-43A610.60
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.39
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.34
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C610.41
eyeball, embryo E14.CNhs10521.399-16E26.90
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D45.27
eyeball, neonate N00.CNhs11207.633-15C66.60
eyeball, neonate N01.CNhs11140.1532-43E75.89
eyeball, neonate N02.CNhs11205.1551-44G84.31
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E210.13
forelimb, embryo E12.CNhs10600.359-14H29.08
forelimb, embryo E13.CNhs10589.384-1E29.15
forelimb, embryo E14.CNhs10577.413-26A87.89
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B57.82
gonad, embryo E13.CNhs11044.1564-45I615.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E922.99
heart, embryo E12.CNhs11015.353-12F518.29
heart, embryo E13.CNhs11013.376-3I914.40
heart, embryo E14.CNhs10597.403-26D422.73
heart, embryo E15.CNhs11017.431-16C820.27
heart, embryo E16.CNhs11021.457-17C616.35
heart, embryo E17.CNhs11025.479-18E517.21
heart, embryo E18.CNhs11030.1283-20G317.44
heart, neonate N00.CNhs11213.639-21E320.08
heart, neonate N03.CNhs11221.1349-25I215.14
heart, neonate N10.CNhs11118.749-24G133.98
heart, neonate N16.CNhs11209.782-15G133.97
heart, neonate N20.CNhs11127.821-26I629.53
heart, neonate N25.CNhs11196.1351-25D319.98
heart, neonate N30.CNhs11202.1390-42D234.76
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I513.86
intestine, embryo E13.CNhs11010.381-16D513.93
intestine, embryo E15.CNhs10602.976-16D810.82
intestine, embryo E16.CNhs10585.463-22H48.27
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F76.66
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E96.92
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F27.76
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I913.85
kidney, embryo E15.CNhs10997.434-16F811.77
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I214.05
kidney, embryo E18.CNhs11001.1288-20C714.93
kidney, neonate N00.CNhs11214.646-21G720.06
kidney, neonate N10.CNhs11206.758-6D518.78
kidney, neonate N20.CNhs11113.832-19I117.57
kidney, neonate N25.CNhs11122.1353-25F310.99
kidney, neonate N30.CNhs11203.1385-42H112.59
liver, adult pregnant day01.CNhs10466.508-5B25.93
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H64.72
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A34.84
liver, embryo E18.CNhs10579.499-43G49.49
liver, neonate N00.CNhs11117.641-24F47.13
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H217.86
liver, neonate N10.CNhs11115.751-24B911.23
liver, neonate N20.CNhs11220.823-25A310.86
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B156.16
lung, embryo E12.CNhs10522.354-16G211.75
lung, embryo E14.CNhs10604.404-26F821.35
lung, embryo E15.CNhs11020.432-17C516.80
lung, embryo E16.CNhs10998.458-17B619.24
lung, embryo E17.CNhs10605.480-44A624.79
lung, embryo E18.CNhs10583.1287-20I637.61
lung, neonate N00.CNhs11224.640-42C647.81
lung, neonate N06.CNhs11212.683-20E527.59
lung, neonate N07.CNhs11111.715-19A336.54
lung, neonate N10.CNhs11219.750-23E641.46
lung, neonate N20.CNhs11109.822-18A455.88
lung, neonate N25.CNhs11119.1359-25C735.23
lung, neonate N30.CNhs11133.1394-42H247.73
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C24.33
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C220.45
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.76
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.33
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I78.66
ovary, embryo E18.CNhs11040.505-44H712.82
ovary, neonate N00.CNhs11217.1299-22I415.47
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F212.40
pancreas, embryo E16.CNhs11003.460-26E510.75
pancreas, embryo E17.CNhs10599.1558-45G312.11
pancreas, embryo E18.CNhs10580.1535-43I78.92
pancreas, neonate N00.CNhs11105.645-26G912.66
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E66.66
pituitary gland, embryo E13.CNhs11009.370-44C78.67
pituitary gland, embryo E14.CNhs11037.398-44A59.43
pituitary gland, embryo E15.CNhs10592.427-16B911.35
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F511.85
pituitary gland, neonate N00.CNhs11190.1308-22E921.31
placenta, adult pregnant day10.CNhs10472.539-13I710.33
placenta, adult pregnant day17.CNhs10464.577-18G310.38
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C36.43
skin, neonate N00.CNhs11124.650-25G48.23
skin, neonate N03.CNhs11215.662-22H35.49
skin, neonate N06.CNhs11097.693-20I56.21
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C127.24
spleen, embryo E18.CNhs11011.1271-21F223.33
spleen, neonate N10.CNhs11116.752-24D17.91
spleen, neonate N20.CNhs11112.824-19H14.37
spleen, neonate N25.CNhs11099.1354-25G37.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.98
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E311.07
stomach, embryo E15.CNhs10603.1252-16G810.98
stomach, embryo E16.CNhs11022.459-17D48.42
stomach, embryo E17.CNhs11006.1035-18D55.65
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A95.70
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F515.85
testis, embryo E15.CNhs11034.443-27C515.88
testis, embryo E16.CNhs11033.470-26G515.36
testis, embryo E17.CNhs11029.486-18I510.98
testis, embryo E18.CNhs11027.503-18G59.29
testis, neonate N00.CNhs11189.1300-22B79.27
testis, neonate N07.CNhs11222.726-26I48.46
testis, neonate N10.CNhs11204.763-44D96.08
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I48.72
thymus, embryo E15.CNhs11005.430-45I25.24
thymus, embryo E16.CNhs11002.456-26C53.90
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B47.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.57
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.22
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F513.70
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I88.10
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B17.76
whole body, embryo E16.CNhs10514.453-14F27.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.83
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.80
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.54
whole body, embryo E17.5.CNhs10513.490-9F98.49
whole body, embryo E17.CNhs10517.475-3I510.74
whole body, embryo E18.CNhs10516.493-3B310.76
whole body, neonate N00.CNhs10525.657-19C213.11
whole body, neonate N01.CNhs10576.659-23C619.13
whole body, neonate N06.CNhs10515.692-21D115.88
whole body, neonate N10.CNhs10518.761-6B412.52





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element4.78e-1179
subdivision of trunk6.19e-1066
lung7.13e-1014
respiratory tube7.13e-1014
respiration organ7.13e-1014
pair of lungs7.13e-1014
lung primordium7.13e-1014
lung bud7.13e-1014
epithelial bud3.44e-0817
epithelial fold6.98e-0820
primary circulatory organ3.53e-0718
heart3.53e-0718
primitive heart tube3.53e-0718
primary heart field3.53e-0718
anterior lateral plate mesoderm3.53e-0718
heart tube3.53e-0718
heart primordium3.53e-0718
cardiac mesoderm3.53e-0718
cardiogenic plate3.53e-0718
heart rudiment3.53e-0718
trunk5.13e-0790
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