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FFCP PHASE1:Mm9::chr2:34817075..34817159,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:34817075..34817159,-
|DHSsupport=NA
|short_description=p1@Traf1
|DPIdataset=NA
|description=CAGE_peak_1_at_Traf1_5end
|association_with_transcript=0bp_to_ENSMUST00000028234,ENSMUST00000129131,ENSMUST00000135870,ENSMUST00000156479_5end
|EntrezGene=22029
|EntrezGene=22029
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=P39428
|UniProt=P39428
|association_with_transcript=0bp_to_ENSMUST00000028234,ENSMUST00000129131,ENSMUST00000135870,ENSMUST00000156479_5end
|cluster_id=chr2:34817075..34817159,-
|description=CAGE_peak_1_at_Traf1_5end
|id=chr2:34817075..34817159,-
|ontology_enrichment_celltype=CL:0000791!4.69e-07!9;CL:0000789!4.69e-07!9;CL:0002420!4.69e-07!9;CL:0002419!4.69e-07!9;CL:0000790!4.69e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000791,3.66e-07,9;CL:0000789,3.66e-07,9;CL:0002420,3.66e-07,9;CL:0002419,3.66e-07,9;CL:0000790,3.66e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!2.53e-10!48;UBERON:0002390!5.32e-09!45;UBERON:0003061!5.32e-09!45;UBERON:0001004!1.74e-07!42;UBERON:0000065!3.00e-07!41
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.58e-11,48;UBERON:0002405,9.58e-11,48;UBERON:0002390,2.20e-09,45;UBERON:0003061,2.20e-09,45;UBERON:0001004,7.47e-08,42;UBERON:0000065,1.31e-07,41;UBERON:0000077,2.60e-07,35;UBERON:0004177,7.86e-07,29;UBERON:0005057,7.86e-07,29
|phase1_expression=1.12104192973356,1.74487703819681,1.81999695755814,0,0,0.503637815735669,1.86890112476421,95.0347660530001,61.9470377467334,55.2392282119905,25.5114772656002,16.2735204350486,47.2514014610128,28.6738919934311,7.66152452176024,6.88415909125408,0,22.2400826577558,22.7609959785526,15.7024171165271,10.0351082378262,0,0,11.6794468639187,10.0940083669555,0.57423196411502,3.87685796543167,2.15471232685889,1.33016393619462,0.756090389279792,7.31710685162506,0,0,0,0,0,0,2.51118978442145,0.7813353445238,1.0470474879476,0,0.683045484958446,0.485510353031154,5.03587271902309,3.75094645512204,14.6837401729345,0.782391344348039,37.0642765846759,35.8088477857189,17.1098311185369,16.0984384869167,24.4379359420452,12.080347636157,45.6978149467147,65.8743846319229,0,1.71920063963254,0,1.01158230429799,0,0.633831403506179,0.338844532069132,0.889294796111139,5.84934816232909,5.93319817540185,7.104801149461,16.1784059679939,79.9174075068834,0,0,0,2.57085885963423,2.42955395046775,0,0.479227355091182,0,1.10115880999389,1.78762273319263,0.614426133024974,0.923204014111357,0.731901148819277,0.52091337055676,1.95428099300967,1.12552522006336,1.98637722109853,3.24091444021034,2.27794689278565,2.23679334990361,1.21161909333094,1.058001841495,6.95674772884027,2.58127163094416,0,0,0.649776417447669,0,3.5111105032938,0,0,0,1.54927761754349,0,0,0,4.5463118612355,5.06719730950197,4.04419556011827,3.88225191044804,66.0291603300288,4.45326417194474,1.56136794089522,1.82679286987285,1.38369298353635,1.65794904607885,3.17489509266403,2.26199864393416,6.17987419335935,4.04878199375753,4.42305275974937,4.20593809863264,3.09178125844551,2.90925151881133,14.9113408974498,5.27005434620785,3.56059401582874,4.59822699375465,7.30872259486114,2.99951365496704,4.57452817463033,1.49790639404823,2.28750301409313,1.38219787324151,0.695297280769106,0.255715457330331,1.24672826735736,1.1356888414743,2.74966282395854,4.85187185379363,1.0108910337347,0.631325567659422,0.260240885925407,0.919608417733892,0.900310649026746,3.16480117455002,2.4493139694478,1.0249097622788,1.78033276663485,1.81092359517311,0,0.378212160335639,0.703804496655795,1.53437012699302,1.39023624612799,4.87553033131033,7.61393904709391,1.79130840136644,0.702213187313235,1.80143534980301,0.568326998791185,1.03562886267751,0.703578179943289,0.900310307305074,1.42046841351126,0.590292695242212,1.54267112887378,0.465067889500816,1.07309360559848,1.5179494507732,1.97471819896177,1.64167464079095,1.05389452409612,1.46199987425332,3.73235195994786,2.54992195644706,1.26173969138476,1.64647379806855,6.60837565967596,1.05780226665418,1.06644125267617,1.39342003116263,1.28867461322093,0.403367049246685,1.11189021922435,1.14135375667535,0.949058123089023,1.31759163779209,2.76468729680296,2.38747766449381,1.75467678407208,3.59527763461689,4.75503709724327,6.17337947088538,7.39704813717019,9.93962059704641,6.76246414038483,14.4592442770173,12.6069116658957,8.27602674705759,2.52946148497029,2.21415221969403,2.66897837330337,2.09775178667061,0.592905254174298,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.50925170356284,2.30156909960649,0.162135226775035,0.549122826376163,0,2.23284568601102,1.5601883655728,0.757736633841335,0.717589654087649,2.8946611281802,55.0564506696482,0,0.488894929326078,0.678980343100753,2.81628297946203,14.2380318825543,34.0402406467,42.7342688808579,16.7093252752562,20.3747514476873,18.1778436269535,30.642439851843,26.5934872073479,45.5644534531761,28.6503439484617,40.7929262864032,14.2611639175521,9.93372286697037,1.9266070798535,1.52375192569864,0,2.27223834483936,0,0.390438744296638,0,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0,0,2.89189184779626,5.53566332312248,4.80777129901589,3.09485222771795,5.77395430403874,3.98235415019888,1.94224508923985,1.81394134178851,1.88605079755898,2.95301892880773,3.99665692327106,2.32585463851399,1.81766864738753,3.92147116223193,2.21225730555071,0,3.09406629744561,4.76615448055303,2.52085531643834,4.39819524861365,4.28674070063185,5.85222771019503,7.49149033928696,9.3792941743209,11.5696680663548,7.27482294997502,0.42366414172764,62.8505934456641,4.78170133530292,4.03661066739764,2.17126529741361,3.81991500810037,3.61109979439135,2.04036585640896,3.70850604021019,24.2636650732951,10.1129565301979,5.55583582109135,5.46268525313604,9.84198439591381,19.9037010689675,35.8654487287035,20.852766396225,35.2409933201281,0.954670618015114,2.68885594543965,2.84647253977588,1.08005340821801,0.836353184057875,1.52853794622324,1.75323650300267,1.81837602595739,1.30877970992015,4.79575401179634,5.59205381778233,0,1.34564891439581,1.15820943319968,3.50012139019286,1.6790777052105,1.18269287843545,0.938857909166032,1.0416350787516,1.36317147753424,0.241584120826006,0,18.9606672376907,2.8381530140623,2.87590680061516,2.33857481360031,3.04345382634718,3.17890167650024,4.32703618271888,6.05527061415767,8.58214824559255,6.24895814570999,6.45287584875779,10.8178247621125,10.6795144220766,12.8564592399726,1.36038230169127,0.443971906748129,0,0.167884616364078,3.28422309854724,13.7008207079363,16.4836461840539,3.00115730710692,50.6587825075717,1.6942555278512,0,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0.906284817968409,2.07104124700728,0,0.798049746802062,1.70733605754134,2.43106717068294,1.25767897576789,3.49302666055027,3.33370091702423,3.91466608753899,5.45562656306086,3.28506375292937,5.57654459758527,3.01802146217722,3.27745276144588,3.45735822986294,3.4461281373368,4.76293691283074,2.78122382267653,3.6652751888104,3.29668720642645,4.85756436443511,6.85738504770831,5.14679837862079,1.90748951957857,3.48831399917588,3.01150017329058,2.96151127620868,3.65855945745545,4.20911538300549,4.34573164306758,2.24456908663095,2.96587545310435,2.65962102414021,1.63692417267876,2.78886314134739,3.66522560864169,2.99772693525535,5.84829021113521,6.44613162144895,3.82576664137687,3.52946270591225,2.08681052058379
|phase1_expression=1.12104192973356,1.74487703819681,1.81999695755814,0,0,0.503637815735669,1.86890112476421,95.0347660530001,61.9470377467334,55.2392282119905,25.5114772656002,16.2735204350486,47.2514014610128,28.6738919934311,7.66152452176024,6.88415909125408,0,22.2400826577558,22.7609959785526,15.7024171165271,10.0351082378262,0,0,11.6794468639187,10.0940083669555,0.57423196411502,3.87685796543167,2.15471232685889,1.33016393619462,0.756090389279792,7.31710685162506,0,0,0,0,0,0,2.51118978442145,0.7813353445238,1.0470474879476,0,0.683045484958446,0.485510353031154,5.03587271902309,3.75094645512204,14.6837401729345,0.782391344348039,37.0642765846759,35.8088477857189,17.1098311185369,16.0984384869167,24.4379359420452,12.080347636157,45.6978149467147,65.8743846319229,0,1.71920063963254,0,1.01158230429799,0,0.633831403506179,0.338844532069132,0.889294796111139,5.84934816232909,5.93319817540185,7.104801149461,16.1784059679939,79.9174075068834,0,0,0,2.57085885963423,2.42955395046775,0,0.479227355091182,0,1.10115880999389,1.78762273319263,0.614426133024974,0.923204014111357,0.731901148819277,0.52091337055676,1.95428099300967,1.12552522006336,1.98637722109853,3.24091444021034,2.27794689278565,2.23679334990361,1.21161909333094,1.058001841495,6.95674772884027,2.58127163094416,0,0,0.649776417447669,0,3.5111105032938,0,0,0,1.54927761754349,0,0,0,4.5463118612355,5.06719730950197,4.04419556011827,3.88225191044804,66.0291603300288,4.45326417194474,1.56136794089522,1.82679286987285,1.38369298353635,1.65794904607885,3.17489509266403,2.26199864393416,6.17987419335935,4.04878199375753,4.42305275974937,4.20593809863264,3.09178125844551,2.90925151881133,14.9113408974498,5.27005434620785,3.56059401582874,4.59822699375465,7.30872259486114,2.99951365496704,4.57452817463033,1.49790639404823,2.28750301409313,1.38219787324151,0.695297280769106,0.255715457330331,1.24672826735736,1.1356888414743,2.74966282395854,4.85187185379363,1.0108910337347,0.631325567659422,0.260240885925407,0.919608417733892,0.900310649026746,3.16480117455002,2.4493139694478,1.0249097622788,1.78033276663485,1.81092359517311,0,0.378212160335639,0.703804496655795,1.53437012699302,1.39023624612799,4.87553033131033,7.61393904709391,1.79130840136644,0.702213187313235,1.80143534980301,0.568326998791185,1.03562886267751,0.703578179943289,0.900310307305074,1.42046841351126,0.590292695242212,1.54267112887378,0.465067889500816,1.07309360559848,1.5179494507732,1.97471819896177,1.64167464079095,1.05389452409612,1.46199987425332,3.73235195994786,2.54992195644706,1.26173969138476,1.64647379806855,6.60837565967596,1.05780226665418,1.06644125267617,1.39342003116263,1.28867461322093,0.403367049246685,1.11189021922435,1.14135375667535,0.949058123089023,1.31759163779209,2.76468729680296,2.38747766449381,1.75467678407208,3.59527763461689,4.75503709724327,6.17337947088538,7.39704813717019,9.93962059704641,6.76246414038483,14.4592442770173,12.6069116658957,8.27602674705759,2.52946148497029,2.21415221969403,2.66897837330337,2.09775178667061,0.592905254174298,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0.50925170356284,2.30156909960649,0.162135226775035,0.549122826376163,0,2.23284568601102,1.5601883655728,0.757736633841335,0.717589654087649,2.8946611281802,55.0564506696482,0,0.488894929326078,0.678980343100753,2.81628297946203,14.2380318825543,34.0402406467,42.7342688808579,16.7093252752562,20.3747514476873,18.1778436269535,30.642439851843,26.5934872073479,45.5644534531761,28.6503439484617,40.7929262864032,14.2611639175521,9.93372286697037,1.9266070798535,1.52375192569864,0,2.27223834483936,0,0.390438744296638,0,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0,0,2.89189184779626,5.53566332312248,4.80777129901589,3.09485222771795,5.77395430403874,3.98235415019888,1.94224508923985,1.81394134178851,1.88605079755898,2.95301892880773,3.99665692327106,2.32585463851399,1.81766864738753,3.92147116223193,2.21225730555071,0,3.09406629744561,4.76615448055303,2.52085531643834,4.39819524861365,4.28674070063185,5.85222771019503,7.49149033928696,9.3792941743209,11.5696680663548,7.27482294997502,0.42366414172764,62.8505934456641,4.78170133530292,4.03661066739764,2.17126529741361,3.81991500810037,3.61109979439135,2.04036585640896,3.70850604021019,24.2636650732951,10.1129565301979,5.55583582109135,5.46268525313604,9.84198439591381,19.9037010689675,35.8654487287035,20.852766396225,35.2409933201281,0.954670618015114,2.68885594543965,2.84647253977588,1.08005340821801,0.836353184057875,1.52853794622324,1.75323650300267,1.81837602595739,1.30877970992015,4.79575401179634,5.59205381778233,0,1.34564891439581,1.15820943319968,3.50012139019286,1.6790777052105,1.18269287843545,0.938857909166032,1.0416350787516,1.36317147753424,0.241584120826006,0,18.9606672376907,2.8381530140623,2.87590680061516,2.33857481360031,3.04345382634718,3.17890167650024,4.32703618271888,6.05527061415767,8.58214824559255,6.24895814570999,6.45287584875779,10.8178247621125,10.6795144220766,12.8564592399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|short_description=p1@Traf1
}}
}}

Latest revision as of 15:36, 26 September 2015

Short description:p1@Traf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Traf1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000028234, ENSMUST00000129131, ENSMUST00000135870, ENSMUST00000156479_5end
EntrezGene:Traf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Traf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E995.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E761.95
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F255.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E625.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F116.27
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E447.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E828.67
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.88
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A222.24
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A422.76
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A615.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.09
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.68
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C237.06
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B835.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C424.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.08
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I945.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A165.87
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C816.18
Mouse Microglia, donor2.CNhs12634.11736-123E879.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.24
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.88
accessory axillary lymph node, adult.CNhs10475.1063-29H966.03
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.31
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.57
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.85
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B57.61
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.65
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I97.40
kidney, embryo E15.CNhs10997.434-16F89.94
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I214.46
kidney, embryo E18.CNhs11001.1288-20C712.61
kidney, neonate N00.CNhs11214.646-21G78.28
kidney, neonate N10.CNhs11206.758-6D52.53
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B155.06
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A614.24
lung, embryo E18.CNhs10583.1287-20I634.04
lung, neonate N00.CNhs11224.640-42C642.73
lung, neonate N06.CNhs11212.683-20E516.71
lung, neonate N07.CNhs11111.715-19A320.37
lung, neonate N10.CNhs11219.750-23E618.18
lung, neonate N20.CNhs11109.822-18A430.64
lung, neonate N25.CNhs11119.1359-25C726.59
lung, neonate N30.CNhs11133.1394-42H245.56
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A128.65
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A140.79
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H29.93
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I75.54
ovary, embryo E18.CNhs11040.505-44H74.81
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F67.49
pituitary gland, embryo E17.CNhs11039.1265-44F59.38
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I77.27
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F862.85
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C43.61
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G224.26
spleen, embryo E16.CNhs11035.461-43C110.11
spleen, embryo E18.CNhs11011.1271-21F25.56
spleen, neonate N10.CNhs11116.752-24D15.46
spleen, neonate N20.CNhs11112.824-19H19.84
spleen, neonate N25.CNhs11099.1354-25G319.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C635.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D335.24
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B518.96
thymus, embryo E14.CNhs11041.402-44I42.84
thymus, embryo E15.CNhs11005.430-45I22.88
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C76.06
thymus, neonate N06.CNhs11197.681-26C48.58
thymus, neonate N07.CNhs11211.713-19D36.25
thymus, neonate N10.CNhs11194.748-24E46.45
thymus, neonate N20.CNhs11186.820-7A210.82
thymus, neonate N25.CNhs11125.1362-25G710.68
thymus, neonate N30.CNhs11132.1393-42G212.86
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F513.70
uterus, adult.CNhs10509.92-27E516.48
vagina, adult.CNhs10502.89-27D53.00
vesicular gland, adult.CNhs10491.51-27F850.66
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C63.83
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.66e-079
alpha-beta T cell3.66e-079
immature T cell3.66e-079
mature T cell3.66e-079
immature alpha-beta T cell3.66e-079

Uber anatomy
Ontology termp-valuen
hemolymphoid system9.58e-1148
immune system9.58e-1148
hematopoietic system2.20e-0945
blood island2.20e-0945
respiratory system7.47e-0842
respiratory tract1.31e-0741
mixed endoderm/mesoderm-derived structure2.60e-0735
hemopoietic organ7.86e-0729
immune organ7.86e-0729
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