FFCP PHASE1:Mm9::chr15:3220971..3221006,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:3220971..3221006,+
|short_description=p1@Sepp1
|description=CAGE_peak_1_at_Sepp1_5end
|association_with_transcript=0bp_to_ENSMUST00000159247,ENSMUST000001...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20363 | |EntrezGene=20363 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=166 | |||
|TSSclassifier=NA | |||
|UniProt=E0CY03,P70274 | |UniProt=E0CY03,P70274 | ||
|association_with_transcript=0bp_to_ENSMUST00000159247,ENSMUST00000160311,NM_009155,uc007vca.1_5end | |||
|cluster_id=chr15:3220971..3221006,+ | |||
|description=CAGE_peak_1_at_Sepp1_5end | |||
|id=chr15:3220971..3221006,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!7.19e-13!25;UBERON:0002330!7.19e-13!25;UBERON:0009854!2.06e-12!23;UBERON:0009856!2.06e-12!23;UBERON:0002107!2.30e-12!22;UBERON:0007499!2.30e-12!22;UBERON:0006925!2.30e-12!22;UBERON:0009497!2.30e-12!22;UBERON:0000015!2.30e-12!22;UBERON:0002423!2.30e-12!22;UBERON:0006235!2.30e-12!22;UBERON:0008835!2.30e-12!22;UBERON:0003894!2.30e-12!22;UBERON:0004161!2.30e-12!22;UBERON:0008836!2.30e-12!22;UBERON:0004119!7.08e-10!130;UBERON:0000925!7.08e-10!130;UBERON:0006595!7.08e-10!130;UBERON:0000160!2.02e-09!43;UBERON:0001007!2.14e-09!128;UBERON:0001555!2.14e-09!128;UBERON:0007026!2.14e-09!128;UBERON:0005409!2.53e-09!59;UBERON:0004921!1.15e-08!126;UBERON:0004185!1.15e-08!126;UBERON:0005177!6.74e-08!85;UBERON:0003914!1.57e-07!47;UBERON:0005172!4.14e-07!49;UBERON:0005173!4.14e-07!49;UBERON:0002417!4.14e-07!49;UBERON:0000916!4.14e-07!49;UBERON:0005256!5.29e-07!47;UBERON:0002100!6.63e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,7.19e-13,25;UBERON:0002330,7.19e-13,25;UBERON:0009854,2.06e-12,23;UBERON:0009856,2.06e-12,23;UBERON:0002107,2.30e-12,22;UBERON:0007499,2.30e-12,22;UBERON:0006925,2.30e-12,22;UBERON:0009497,2.30e-12,22;UBERON:0000015,2.30e-12,22;UBERON:0002423,2.30e-12,22;UBERON:0006235,2.30e-12,22;UBERON:0008835,2.30e-12,22;UBERON:0003894,2.30e-12,22;UBERON:0004161,2.30e-12,22;UBERON:0008836,2.30e-12,22;UBERON:0005177,6.50e-08,79;UBERON:0005256,1.51e-07,45;UBERON:0003914,1.57e-07,47;UBERON:0002100,3.51e-07,90;UBERON:0004119,3.56e-07,118;UBERON:0000925,3.56e-07,118;UBERON:0006595,3.56e-07,118;UBERON:0005172,4.14e-07,49;UBERON:0005173,4.14e-07,49;UBERON:0002417,4.14e-07,49;UBERON:0000916,4.14e-07,49;UBERON:0001007,9.11e-07,116;UBERON:0001555,9.11e-07,116;UBERON:0007026,9.11e-07,116 | |||
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| ||
|short_description=p1@Sepp1 | |||
}} | }} |
Latest revision as of 17:18, 26 September 2015
Short description: | p1@Sepp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sepp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | 0bp_to_ENSMUST00000159247, ENSMUST00000160311, NM_009155, uc007vca.1_5end |
EntrezGene: | Sepp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 7.19e-13 | 25 |
exocrine system | 7.19e-13 | 25 |
digestive tract diverticulum | 2.06e-12 | 23 |
sac | 2.06e-12 | 23 |
liver | 2.30e-12 | 22 |
epithelial sac | 2.30e-12 | 22 |
digestive gland | 2.30e-12 | 22 |
epithelium of foregut-midgut junction | 2.30e-12 | 22 |
anatomical boundary | 2.30e-12 | 22 |
hepatobiliary system | 2.30e-12 | 22 |
foregut-midgut junction | 2.30e-12 | 22 |
hepatic diverticulum | 2.30e-12 | 22 |
liver primordium | 2.30e-12 | 22 |
septum transversum | 2.30e-12 | 22 |
liver bud | 2.30e-12 | 22 |
trunk region element | 6.50e-08 | 79 |
trunk mesenchyme | 1.51e-07 | 45 |
epithelial tube | 1.57e-07 | 47 |
trunk | 3.51e-07 | 90 |
endoderm-derived structure | 3.56e-07 | 118 |
endoderm | 3.56e-07 | 118 |
presumptive endoderm | 3.56e-07 | 118 |
abdomen element | 4.14e-07 | 49 |
abdominal segment element | 4.14e-07 | 49 |
abdominal segment of trunk | 4.14e-07 | 49 |
abdomen | 4.14e-07 | 49 |
digestive system | 9.11e-07 | 116 |
digestive tract | 9.11e-07 | 116 |
primitive gut | 9.11e-07 | 116 |