FFCP PHASE1:Mm9::chr1:167638140..167638160,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226594 | |EntrezGene=226594 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UZA1 | |UniProt=Q3UZA1 | ||
|association_with_transcript=64bp_to_ENSMUST00000040357,ENSMUST00000097474,NM_001038846,NM_178593,uc007djj.1,uc007djk.1_5end | |association_with_transcript=64bp_to_ENSMUST00000040357,ENSMUST00000097474,NM_001038846,NM_178593,uc007djj.1,uc007djk.1_5end | ||
|cluster_id=chr1:167638140..167638160,- | |||
|description=CAGE_peak_3_at_Rcsd1_5end | |description=CAGE_peak_3_at_Rcsd1_5end | ||
|id=chr1:167638140..167638160,- | |id=chr1:167638140..167638160,- | ||
|ontology_enrichment_celltype=CL:0000988!9.21e-08!32;CL:0002032!9.21e-08!32;CL:0000037!9.21e-08!32;CL:0000566!9.21e-08!32;CL:0000837!9.21e-08!32 | |ontology_enrichment_celltype=CL:0000988!9.21e-08!32;CL:0002032!9.21e-08!32;CL:0000037!9.21e-08!32;CL:0000566!9.21e-08!32;CL:0000837!9.21e-08!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.56e-09,32;CL:0002032,8.56e-09,32;CL:0000037,8.56e-09,32;CL:0000837,8.56e-09,32;CL:0002031,3.05e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!9.23e-16!88;UBERON:0007100!9.73e-11!18;UBERON:0000948!9.73e-11!18;UBERON:0005498!9.73e-11!18;UBERON:0004140!9.73e-11!18;UBERON:0009881!9.73e-11!18;UBERON:0004141!9.73e-11!18;UBERON:0003084!9.73e-11!18;UBERON:0007005!9.73e-11!18;UBERON:0004139!9.73e-11!18;UBERON:0004291!9.73e-11!18;UBERON:0000926!1.09e-10!193;UBERON:0004120!1.09e-10!193;UBERON:0006603!1.09e-10!193;UBERON:0002193!3.72e-10!48;UBERON:0002390!1.09e-09!45;UBERON:0003061!1.09e-09!45;UBERON:0004872!5.65e-09!33;UBERON:0002204!1.53e-07!32;UBERON:0004535!1.90e-07!23;UBERON:0001009!1.90e-07!23;UBERON:0001474!2.66e-07!22;UBERON:0004765!2.66e-07!22;UBERON:0001434!2.66e-07!22 | |ontology_enrichment_uberon=UBERON:0003081!9.23e-16!88;UBERON:0007100!9.73e-11!18;UBERON:0000948!9.73e-11!18;UBERON:0005498!9.73e-11!18;UBERON:0004140!9.73e-11!18;UBERON:0009881!9.73e-11!18;UBERON:0004141!9.73e-11!18;UBERON:0003084!9.73e-11!18;UBERON:0007005!9.73e-11!18;UBERON:0004139!9.73e-11!18;UBERON:0004291!9.73e-11!18;UBERON:0000926!1.09e-10!193;UBERON:0004120!1.09e-10!193;UBERON:0006603!1.09e-10!193;UBERON:0002193!3.72e-10!48;UBERON:0002390!1.09e-09!45;UBERON:0003061!1.09e-09!45;UBERON:0004872!5.65e-09!33;UBERON:0002204!1.53e-07!32;UBERON:0004535!1.90e-07!23;UBERON:0001009!1.90e-07!23;UBERON:0001474!2.66e-07!22;UBERON:0004765!2.66e-07!22;UBERON:0001434!2.66e-07!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.54e-16,87;UBERON:0000926,1.89e-11,120;UBERON:0004120,1.89e-11,120;UBERON:0006603,1.89e-11,120;UBERON:0007100,2.33e-11,18;UBERON:0000948,2.33e-11,18;UBERON:0005498,2.33e-11,18;UBERON:0004140,2.33e-11,18;UBERON:0009881,2.33e-11,18;UBERON:0004141,2.33e-11,18;UBERON:0003084,2.33e-11,18;UBERON:0007005,2.33e-11,18;UBERON:0004139,2.33e-11,18;UBERON:0004291,2.33e-11,18;UBERON:0002193,5.26e-11,48;UBERON:0002405,5.26e-11,48;UBERON:0002390,1.65e-10,45;UBERON:0003061,1.65e-10,45;UBERON:0004872,5.29e-10,33;UBERON:0004535,1.52e-08,23;UBERON:0001009,1.52e-08,23;UBERON:0002204,7.84e-08,32;UBERON:0001474,6.74e-07,22;UBERON:0004765,6.74e-07,22;UBERON:0001434,6.74e-07,22 | |||
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| ||
|short_description=p3@Rcsd1 | |short_description=p3@Rcsd1 | ||
}} | }} |
Latest revision as of 17:20, 26 September 2015
Short description: | p3@Rcsd1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rcsd1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 64bp_to_ENSMUST00000040357, ENSMUST00000097474, NM_001038846, NM_178593, uc007djj.1, uc007djk.1_5end |
EntrezGene: | Rcsd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.56e-09 | 32 |
hematopoietic oligopotent progenitor cell | 8.56e-09 | 32 |
hematopoietic stem cell | 8.56e-09 | 32 |
hematopoietic multipotent progenitor cell | 8.56e-09 | 32 |
hematopoietic lineage restricted progenitor cell | 3.05e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.54e-16 | 87 |
mesoderm | 1.89e-11 | 120 |
mesoderm-derived structure | 1.89e-11 | 120 |
presumptive mesoderm | 1.89e-11 | 120 |
primary circulatory organ | 2.33e-11 | 18 |
heart | 2.33e-11 | 18 |
primitive heart tube | 2.33e-11 | 18 |
primary heart field | 2.33e-11 | 18 |
anterior lateral plate mesoderm | 2.33e-11 | 18 |
heart tube | 2.33e-11 | 18 |
heart primordium | 2.33e-11 | 18 |
cardiac mesoderm | 2.33e-11 | 18 |
cardiogenic plate | 2.33e-11 | 18 |
heart rudiment | 2.33e-11 | 18 |
hemolymphoid system | 5.26e-11 | 48 |
immune system | 5.26e-11 | 48 |
hematopoietic system | 1.65e-10 | 45 |
blood island | 1.65e-10 | 45 |
splanchnic layer of lateral plate mesoderm | 5.29e-10 | 33 |
cardiovascular system | 1.52e-08 | 23 |
circulatory system | 1.52e-08 | 23 |
musculoskeletal system | 7.84e-08 | 32 |
bone element | 6.74e-07 | 22 |
skeletal element | 6.74e-07 | 22 |
skeletal system | 6.74e-07 | 22 |