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FFCP PHASE1:Mm9::chr7:51684308..51684349,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:51684308..51684349,+
|DHSsupport=NA
|short_description=p4@Lrrc4b
|DPIdataset=NA
|description=CAGE_peak_4_at_Lrrc4b_5end
|association_with_transcript=-38bp_to_ENSMUST00000127790_5end
|EntrezGene=272381
|EntrezGene=272381
|HGNC=
|HGNC=
|MCL_coexpression_id=747
|TSSclassifier=NA
|UniProt=D3YZP3
|UniProt=D3YZP3
|association_with_transcript=-38bp_to_ENSMUST00000127790_5end
|cluster_id=chr7:51684308..51684349,+
|description=CAGE_peak_4_at_Lrrc4b_5end
|id=chr7:51684308..51684349,+
|ontology_enrichment_celltype=CL:0000117!1.31e-17!23;CL:0000337!1.31e-17!23;CL:0000221!1.43e-17!44;CL:0000133!1.43e-17!44;CL:0002319!3.15e-17!43;CL:0000540!4.46e-15!33;CL:0000047!4.46e-15!33;CL:0000031!4.46e-15!33;CL:0000404!4.46e-15!33;CL:0000055!2.66e-12!50;CL:0000393!1.49e-10!39;CL:0000211!1.49e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.23e-31,23;CL:0000337,2.23e-31,23;CL:0002319,6.27e-26,43;CL:0000221,4.11e-25,44;CL:0000133,4.11e-25,44;CL:0000540,4.14e-21,33;CL:0000047,4.14e-21,33;CL:0000031,4.14e-21,33;CL:0000404,4.14e-21,33;CL:0000393,1.15e-16,39;CL:0000211,1.15e-16,39;CL:0002321,3.17e-12,70;CL:0002609,9.59e-08,6;CL:0002453,1.84e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.31e-37!73;UBERON:0005743!4.31e-37!73;UBERON:0000073!7.76e-36!75;UBERON:0001016!7.76e-36!75;UBERON:0004121!1.48e-31!102;UBERON:0000924!1.48e-31!102;UBERON:0006601!1.48e-31!102;UBERON:0002346!6.42e-31!71;UBERON:0003075!6.42e-31!71;UBERON:0007284!6.42e-31!71;UBERON:0001049!5.77e-30!52;UBERON:0005068!5.77e-30!52;UBERON:0006241!5.77e-30!52;UBERON:0007135!5.77e-30!52;UBERON:0000955!4.93e-28!50;UBERON:0006238!4.93e-28!50;UBERON:0000033!7.38e-28!63;UBERON:0002616!1.90e-27!49;UBERON:0003056!2.38e-23!49;UBERON:0003080!1.54e-22!40;UBERON:0002020!3.92e-22!34;UBERON:0002780!8.60e-22!39;UBERON:0001890!8.60e-22!39;UBERON:0006240!8.60e-22!39;UBERON:0002791!3.56e-18!29;UBERON:0003528!3.56e-18!29;UBERON:0001893!3.56e-18!29;UBERON:0000153!1.03e-14!94;UBERON:0007811!4.52e-14!86;UBERON:0000956!2.11e-12!21;UBERON:0001869!2.11e-12!21;UBERON:0000203!2.11e-12!21;UBERON:0002619!3.72e-10!17;UBERON:0003076!8.68e-08!12;UBERON:0003057!8.68e-08!12;UBERON:0002420!4.68e-07!8;UBERON:0007245!4.68e-07!8;UBERON:0010009!4.68e-07!8;UBERON:0010011!4.68e-07!8;UBERON:0000454!4.68e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.81e-52,73;UBERON:0001016,2.46e-50,75;UBERON:0000073,6.56e-48,54;UBERON:0001049,7.92e-45,52;UBERON:0005068,7.92e-45,52;UBERON:0006241,7.92e-45,52;UBERON:0007135,7.92e-45,52;UBERON:0002020,8.02e-40,34;UBERON:0004121,6.89e-38,95;UBERON:0000924,6.89e-38,95;UBERON:0006601,6.89e-38,95;UBERON:0002346,3.75e-37,64;UBERON:0003075,3.75e-37,64;UBERON:0007284,3.75e-37,64;UBERON:0000955,4.73e-37,47;UBERON:0006238,4.73e-37,47;UBERON:0002616,5.13e-36,46;UBERON:0003528,1.97e-32,29;UBERON:0002791,1.97e-32,29;UBERON:0001893,1.97e-32,29;UBERON:0010371,7.07e-31,73;UBERON:0003080,7.90e-31,40;UBERON:0002780,1.59e-29,39;UBERON:0001890,1.59e-29,39;UBERON:0006240,1.59e-29,39;UBERON:0003056,9.12e-25,49;UBERON:0010314,1.07e-21,92;UBERON:0000956,1.12e-21,21;UBERON:0001869,1.12e-21,21;UBERON:0000203,1.12e-21,21;UBERON:0002619,1.67e-17,17;UBERON:0003076,8.17e-14,12;UBERON:0003057,8.17e-14,12;UBERON:0000025,2.43e-13,114;UBERON:0002420,9.13e-12,8;UBERON:0007245,9.13e-12,8;UBERON:0010009,9.13e-12,8;UBERON:0010011,9.13e-12,8;UBERON:0000454,9.13e-12,8;UBERON:0004111,1.18e-11,122;UBERON:0002021,1.07e-10,10;UBERON:0000411,1.07e-10,10;UBERON:0001950,1.07e-10,10;UBERON:0011216,6.06e-10,194;UBERON:0002240,1.20e-09,6;UBERON:0005174,1.20e-09,6;UBERON:0001137,1.20e-09,6;UBERON:0001948,2.32e-08,5;UBERON:0002315,2.32e-08,5;UBERON:0001954,3.22e-08,7;UBERON:0003022,3.22e-08,7;UBERON:0002421,3.22e-08,7;UBERON:0000349,3.22e-08,7;UBERON:0002600,3.22e-08,7;UBERON:0000369,1.15e-07,5;UBERON:0002435,1.15e-07,5;UBERON:0000204,1.15e-07,5;UBERON:0010082,1.15e-07,5;UBERON:0002950,6.46e-07,4;UBERON:0001891,6.46e-07,4;UBERON:0009616,6.46e-07,4;UBERON:0010286,6.46e-07,4
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41285531693518,3.51497892375155,2.52758868796568,1.53985063787899,1.43752564364972,0,0,0.336093799142464,0,0,0,15.578367486189,13.2247744818008,13.9442908771359,0,0,0,0,0,14.9800055259202,40.3429220587632,5.91030790158323,3.51015439662396,5.25812403378455,20.2812198926701,12.8103753751936,3.67472397644862,4.69642807989358,6.43453150627015,9.91042928994498,14.5563565417114,14.2854075928306,15.5625819521629,12.0763689555181,10.4182674111352,13.959149950069,17.4456409109821,10.8486755921535,14.142172102736,12.6710795911202,11.3703661953433,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0.593768556259299,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,7.02673912827713,4.1889341362691,0,0,0,0,10.7849260371472,4.57500602818627,5.78010019719176,3.65031072403781,4.09144731728529,8.3115217823824,5.51620294430376,0.509196819251581,0.124406970610093,0,0,0.390361328888111,0.459804208866946,0.900310649026746,0.452114453507145,1.42876648217788,0.512454881139399,0.843315521037559,0.517406741478031,0.431135985865684,0,0.351902248327898,0.876782929710299,0.556094498451196,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.57492912559016,3.91037527041281,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,8.34863067936518,7.85318300167761,0,0,0.631016438832513,0,1.29254038639679,0.238968797952552,0.445597348164788,0.283076530788832,0,0.584511715822624,0,3.53453448063988,0,0.35613120733451,0.325773918707152,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,1.81102157295856,0.857348140126369,0.532020700926821,0.713475270408282,0.822745103010605,1.8267896946876,0,0,0.220528398054962,0,0,0,0,0,0,11.6817940266621,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0.258319646955462,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.887943813496259,0.269141569828427,0.167884616364078,0.19318959403219,0,0,0,0,3.95326289831947,1.38097570952153,5.15605962095457,3.60891682921744,4.11049511862385,3.0215755895588,4.05013500139084,1.35096360967266,4.98456649882625,3.62432218226274,0.93408612825759,1.59609949360412,2.73173769206615,0.729320151204882,0.838452650511929,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.936415074698824,1.21647789569252,1.32101578597911,1.42888107384922,1.15884325944855,0.964546102318525,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,0,0.581385666529314,0.752875043322645,0.676916863133412,0.182927972872773,0.526139422875686,0.814824683075171,0,1.06771516311757,1.0835493061312,0,0.619747364743864,0.578719832943424,3.2475375131933,0.701794825336225,1.50409737833809,0.57386499620653,0.220591419119515,0.463735671240843
|phase1_expression=0.80074423552397,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41285531693518,3.51497892375155,2.52758868796568,1.53985063787899,1.43752564364972,0,0,0.336093799142464,0,0,0,15.578367486189,13.2247744818008,13.9442908771359,0,0,0,0,0,14.9800055259202,40.3429220587632,5.91030790158323,3.51015439662396,5.25812403378455,20.2812198926701,12.8103753751936,3.67472397644862,4.69642807989358,6.43453150627015,9.91042928994498,14.5563565417114,14.2854075928306,15.5625819521629,12.0763689555181,10.4182674111352,13.959149950069,17.4456409109821,10.8486755921535,14.142172102736,12.6710795911202,11.3703661953433,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0.593768556259299,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,7.02673912827713,4.1889341362691,0,0,0,0,10.7849260371472,4.57500602818627,5.78010019719176,3.65031072403781,4.09144731728529,8.3115217823824,5.51620294430376,0.509196819251581,0.124406970610093,0,0,0.390361328888111,0.459804208866946,0.900310649026746,0.452114453507145,1.42876648217788,0.512454881139399,0.843315521037559,0.517406741478031,0.431135985865684,0,0.351902248327898,0.876782929710299,0.556094498451196,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0,0,0,0,0,0.0810688095458557,0,0,0,3.57492912559016,3.91037527041281,0,0,0,0,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0.275936746304732,8.34863067936518,7.85318300167761,0,0,0.631016438832513,0,1.29254038639679,0.238968797952552,0.445597348164788,0.283076530788832,0,0.584511715822624,0,3.53453448063988,0,0.35613120733451,0.325773918707152,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,1.81102157295856,0.857348140126369,0.532020700926821,0.713475270408282,0.822745103010605,1.8267896946876,0,0,0.220528398054962,0,0,0,0,0,0,11.6817940266621,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0,0.258319646955462,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.887943813496259,0.269141569828427,0.167884616364078,0.19318959403219,0,0,0,0,3.95326289831947,1.38097570952153,5.15605962095457,3.60891682921744,4.11049511862385,3.0215755895588,4.05013500139084,1.35096360967266,4.98456649882625,3.62432218226274,0.93408612825759,1.59609949360412,2.73173769206615,0.729320151204882,0.838452650511929,0.367687016900028,0.44449345560323,0.206035057238894,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.936415074698824,1.21647789569252,1.32101578597911,1.42888107384922,1.15884325944855,0.964546102318525,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,0,0.581385666529314,0.752875043322645,0.676916863133412,0.182927972872773,0.526139422875686,0.814824683075171,0,1.06771516311757,1.0835493061312,0,0.619747364743864,0.578719832943424,3.2475375131933,0.701794825336225,1.50409737833809,0.57386499620653,0.220591419119515,0.463735671240843
|short_description=p4@Lrrc4b
}}
}}

Latest revision as of 19:13, 26 September 2015

Short description:p4@Lrrc4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Lrrc4b_5end
Coexpression cluster:MCL_coexpression_mm9:747
Association with transcript: -38bp_to_ENSMUST00000127790_5end
EntrezGene:Lrrc4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Lrrc4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.41
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.58
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C814.98
Mouse Microglia, donor2.CNhs12634.11736-123E840.34
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.08
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.85
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.14
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.78
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D53.65
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G13.91
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C28.35
medulla oblongata, neonate N30.CNhs11200.1396-42A37.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C911.68
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.81e-5273
nervous system2.46e-5075
regional part of nervous system6.56e-4854
neural tube7.92e-4552
neural rod7.92e-4552
future spinal cord7.92e-4552
neural keel7.92e-4552
gray matter8.02e-4034
ectoderm-derived structure6.89e-3895
ectoderm6.89e-3895
presumptive ectoderm6.89e-3895
neurectoderm3.75e-3764
neural plate3.75e-3764
presumptive neural plate3.75e-3764
brain4.73e-3747
future brain4.73e-3747
regional part of brain5.13e-3646
brain grey matter1.97e-3229
regional part of telencephalon1.97e-3229
telencephalon1.97e-3229
ecto-epithelium7.07e-3173
anterior neural tube7.90e-3140
regional part of forebrain1.59e-2939
forebrain1.59e-2939
future forebrain1.59e-2939
pre-chordal neural plate9.12e-2549
structure with developmental contribution from neural crest1.07e-2192
cerebral cortex1.12e-2121
cerebral hemisphere1.12e-2121
pallium1.12e-2121
regional part of cerebral cortex1.67e-1717
posterior neural tube8.17e-1412
chordal neural plate8.17e-1412
tube2.43e-13114
basal ganglion9.13e-128
nuclear complex of neuraxis9.13e-128
aggregate regional part of brain9.13e-128
collection of basal ganglia9.13e-128
cerebral subcortex9.13e-128
anatomical conduit1.18e-11122
occipital lobe1.07e-1010
visual cortex1.07e-1010
neocortex1.07e-1010
organ system subdivision6.06e-10194
spinal cord1.20e-096
dorsal region element1.20e-096
dorsum1.20e-096
regional part of spinal cord2.32e-085
gray matter of spinal cord2.32e-085
Ammon's horn3.22e-087
lobe parts of cerebral cortex3.22e-087
hippocampal formation3.22e-087
limbic system3.22e-087
limbic lobe3.22e-087
corpus striatum1.15e-075
striatum1.15e-075
ventral part of telencephalon1.15e-075
future corpus striatum1.15e-075
regional part of midbrain6.46e-074
midbrain6.46e-074
presumptive midbrain6.46e-074
midbrain neural tube6.46e-074
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