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FFCP PHASE1:Mm9::chr4:34011966..34011987,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:34011966..34011987,+
|DHSsupport=NA
|short_description=p3@Cnr1
|DPIdataset=NA
|description=CAGE_peak_3_at_Cnr1_5end
|association_with_transcript=359bp_to_ENSMUST00000057188,NM_007726,uc008sfw.1,uc012dbm.1_5end
|EntrezGene=12801
|EntrezGene=12801
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=P47746,B1AZT0
|UniProt=P47746,B1AZT0
|association_with_transcript=359bp_to_ENSMUST00000057188,NM_007726,uc008sfw.1,uc012dbm.1_5end
|cluster_id=chr4:34011966..34011987,+
|description=CAGE_peak_3_at_Cnr1_5end
|id=chr4:34011966..34011987,+
|ontology_enrichment_celltype=CL:0000540!6.79e-17!33;CL:0000047!6.79e-17!33;CL:0000031!6.79e-17!33;CL:0000404!6.79e-17!33;CL:0000117!8.31e-13!23;CL:0000337!8.31e-13!23;CL:0000393!5.51e-12!39;CL:0000211!5.51e-12!39;CL:0000221!2.47e-11!44;CL:0000133!2.47e-11!44;CL:0002319!4.85e-11!43;CL:0000055!1.35e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.54e-26,33;CL:0000047,1.54e-26,33;CL:0000031,1.54e-26,33;CL:0000404,1.54e-26,33;CL:0000117,5.69e-23,23;CL:0000337,5.69e-23,23;CL:0000393,3.04e-21,39;CL:0000211,3.04e-21,39;CL:0002319,1.52e-18,43;CL:0000221,5.98e-18,44;CL:0000133,5.98e-18,44;CL:0002321,1.40e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.52e-25!73;UBERON:0005743!2.52e-25!73;UBERON:0000073!9.49e-25!75;UBERON:0001016!9.49e-25!75;UBERON:0004121!4.11e-24!102;UBERON:0000924!4.11e-24!102;UBERON:0006601!4.11e-24!102;UBERON:0002346!8.77e-24!71;UBERON:0003075!8.77e-24!71;UBERON:0007284!8.77e-24!71;UBERON:0002020!2.48e-19!34;UBERON:0001049!3.02e-19!52;UBERON:0005068!3.02e-19!52;UBERON:0006241!3.02e-19!52;UBERON:0007135!3.02e-19!52;UBERON:0000955!3.64e-18!50;UBERON:0006238!3.64e-18!50;UBERON:0002616!1.37e-17!49;UBERON:0000033!1.67e-17!63;UBERON:0002791!2.27e-16!29;UBERON:0003528!2.27e-16!29;UBERON:0001893!2.27e-16!29;UBERON:0003080!2.37e-14!40;UBERON:0003056!3.55e-14!49;UBERON:0002780!1.15e-13!39;UBERON:0001890!1.15e-13!39;UBERON:0006240!1.15e-13!39;UBERON:0000956!6.89e-13!21;UBERON:0001869!6.89e-13!21;UBERON:0000203!6.89e-13!21;UBERON:0002619!3.01e-10!17;UBERON:0002021!1.12e-08!10;UBERON:0000411!1.12e-08!10;UBERON:0001950!1.12e-08!10;UBERON:0007811!8.90e-08!86;UBERON:0000153!8.07e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.53e-47,73;UBERON:0001016,1.86e-45,75;UBERON:0000073,3.70e-39,54;UBERON:0001049,1.81e-36,52;UBERON:0005068,1.81e-36,52;UBERON:0006241,1.81e-36,52;UBERON:0007135,1.81e-36,52;UBERON:0002020,2.28e-35,34;UBERON:0004121,4.79e-33,95;UBERON:0000924,4.79e-33,95;UBERON:0006601,4.79e-33,95;UBERON:0002346,5.69e-31,64;UBERON:0003075,5.69e-31,64;UBERON:0007284,5.69e-31,64;UBERON:0000955,1.66e-30,47;UBERON:0006238,1.66e-30,47;UBERON:0003528,2.17e-29,29;UBERON:0002791,2.17e-29,29;UBERON:0001893,2.17e-29,29;UBERON:0002616,2.24e-29,46;UBERON:0010371,3.96e-27,73;UBERON:0003080,2.49e-25,40;UBERON:0010314,3.61e-24,92;UBERON:0002780,5.70e-24,39;UBERON:0001890,5.70e-24,39;UBERON:0006240,5.70e-24,39;UBERON:0000956,1.54e-21,21;UBERON:0001869,1.54e-21,21;UBERON:0000203,1.54e-21,21;UBERON:0003056,4.06e-19,49;UBERON:0002619,2.63e-16,17;UBERON:0002021,6.09e-16,10;UBERON:0000411,6.09e-16,10;UBERON:0001950,6.09e-16,10;UBERON:0003076,2.69e-11,12;UBERON:0003057,2.69e-11,12;UBERON:0000025,9.33e-11,114;UBERON:0004111,4.59e-10,122;UBERON:0011216,5.56e-10,194;UBERON:0002420,7.94e-09,8;UBERON:0007245,7.94e-09,8;UBERON:0010009,7.94e-09,8;UBERON:0010011,7.94e-09,8;UBERON:0000454,7.94e-09,8;UBERON:0002240,4.44e-08,6;UBERON:0005174,4.44e-08,6;UBERON:0001137,4.44e-08,6;UBERON:0002950,4.57e-07,4;UBERON:0001891,4.57e-07,4;UBERON:0009616,4.57e-07,4;UBERON:0010286,4.57e-07,4;UBERON:0001948,5.55e-07,5;UBERON:0002315,5.55e-07,5
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,2.02316460859598,1.05798195854407,3.80298842103708,0,0,0,0,0,0,0,2.17748185847803,2.56511282830212,3.36519938162211,1.71390590642282,1.76694832761291,2.20483438586917,1.34183659425531,0.919218786610021,3.30347642998166,2.42605942361857,1.99688493233117,1.31886287730194,1.28082701043374,0,3.35019598801657,4.50210088025344,3.20876320331301,1.47314292736834,2.70506193518296,2.60959224155421,0.302904773332736,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,1.7813056687779,0.173485326766136,0.608930956624282,1.61430848079241,0.60289056221049,1.05829836422134,3.01599819191221,0,0.144599356919912,0.884610551949874,0.647067399789637,0.220841518460394,0,0,14.9318206475889,12.5668024088073,0.510914110417183,0,0,0,4.6435098215495,18.3000241127451,2.76439574648302,7.64827008846016,8.69432554923124,3.1168206683934,5.67844420737152,0.81471491080253,0,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.204109497453984,0.896796041993948,0.749613796477831,0.517406741478031,0,0.378212160335639,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.51898840548794,2.26390147234426,0.330418782983798,0,0.426576501070468,0.464473343720877,0.515469845288373,0.201683524623343,0.444756087689741,1.14135375667535,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0,3.37156238974363,3.98519734413491,0,0,2.2085575359138,1.56175497718655,0.861693590931196,0.477937595905104,1.11399337041197,0.283076530788832,1.21443210502468,1.16902343164525,1.58115111178609,1.92792789853084,0,0.890328018336276,0.325773918707152,0.164970122972535,0,0,0,0.754420319023592,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0.441056796109924,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,2.03967832211561,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0.218362563746178,0,0,0,0,0,0,0,0.496375471371293,0,0.387479470433193,0.506868376472335,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,2.82375921308533,2.30162618253588,8.59343270159095,5.67115501734169,4.7955776383945,9.82012066606611,6.75022500231806,5.85417564191487,9.5159905886683,3.10656187051092,0.31136204275253,1.19707462020309,0.170733605754134,0.243106717068294,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0.962757628775446,1.26348605881899,0,0.565879024158229,0.468207537349412,0.256100609619477,0.631790158511746,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.588795680537589,0.685738504770831,0.887379030796687,0.238436189947321,0.436039249896986,0.188218760830661,1.01537529470012,1.46342378298218,0.789209134313529,0.950628796921032,0,0.355905054372522,0.394017929502254,0.818462086339379,0.309873682371932,0.578719832943424,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,2.02316460859598,1.05798195854407,3.80298842103708,0,0,0,0,0,0,0,2.17748185847803,2.56511282830212,3.36519938162211,1.71390590642282,1.76694832761291,2.20483438586917,1.34183659425531,0.919218786610021,3.30347642998166,2.42605942361857,1.99688493233117,1.31886287730194,1.28082701043374,0,3.35019598801657,4.50210088025344,3.20876320331301,1.47314292736834,2.70506193518296,2.60959224155421,0.302904773332736,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0.563373679106722,0,0,0,0,0,0,0.22836775943812,0,1.7813056687779,0.173485326766136,0.608930956624282,1.61430848079241,0.60289056221049,1.05829836422134,3.01599819191221,0,0.144599356919912,0.884610551949874,0.647067399789637,0.220841518460394,0,0,14.9318206475889,12.5668024088073,0.510914110417183,0,0,0,4.6435098215495,18.3000241127451,2.76439574648302,7.64827008846016,8.69432554923124,3.1168206683934,5.67844420737152,0.81471491080253,0,0,0,0,0.229902104433473,0.360124259610698,0.150704817835715,0.204109497453984,0.896796041993948,0.749613796477831,0.517406741478031,0,0.378212160335639,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.51898840548794,2.26390147234426,0.330418782983798,0,0.426576501070468,0.464473343720877,0.515469845288373,0.201683524623343,0.444756087689741,1.14135375667535,0,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0,0.318909537314974,0.163863314715738,0.172684981865896,0,0,0,0,0,3.37156238974363,3.98519734413491,0,0,2.2085575359138,1.56175497718655,0.861693590931196,0.477937595905104,1.11399337041197,0.283076530788832,1.21443210502468,1.16902343164525,1.58115111178609,1.92792789853084,0,0.890328018336276,0.325773918707152,0.164970122972535,0,0,0,0.754420319023592,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0,0,0,0.441056796109924,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,2.03967832211561,0,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0.218362563746178,0,0,0,0,0,0,0,0.496375471371293,0,0.387479470433193,0.506868376472335,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,2.82375921308533,2.30162618253588,8.59343270159095,5.67115501734169,4.7955776383945,9.82012066606611,6.75022500231806,5.85417564191487,9.5159905886683,3.10656187051092,0.31136204275253,1.19707462020309,0.170733605754134,0.243106717068294,0.628839487883947,0.367687016900028,0.222246727801615,0.412070114477788,0.962757628775446,1.26348605881899,0,0.565879024158229,0.468207537349412,0.256100609619477,0.631790158511746,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.588795680537589,0.685738504770831,0.887379030796687,0.238436189947321,0.436039249896986,0.188218760830661,1.01537529470012,1.46342378298218,0.789209134313529,0.950628796921032,0,0.355905054372522,0.394017929502254,0.818462086339379,0.309873682371932,0.578719832943424,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0
|short_description=p3@Cnr1
}}
}}

Latest revision as of 22:16, 26 September 2015

Short description:p3@Cnr1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cnr1_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 359bp_to_ENSMUST00000057188, NM_007726, uc008sfw.1, uc012dbm.1_5end
EntrezGene:Cnr1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cnr1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.93
cerebellum, neonate N30.CNhs11135.1395-42I212.57
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D818.30
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.52
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.54e-2633
neuronal stem cell1.54e-2633
neuroblast1.54e-2633
electrically signaling cell1.54e-2633
CNS neuron (sensu Vertebrata)5.69e-2323
neuroblast (sensu Vertebrata)5.69e-2323
electrically responsive cell3.04e-2139
electrically active cell3.04e-2139
neural cell1.52e-1843
ectodermal cell5.98e-1844
neurectodermal cell5.98e-1844
embryonic cell1.40e-0870

Uber anatomy
Ontology termp-valuen
central nervous system4.53e-4773
nervous system1.86e-4575
regional part of nervous system3.70e-3954
neural tube1.81e-3652
neural rod1.81e-3652
future spinal cord1.81e-3652
neural keel1.81e-3652
gray matter2.28e-3534
ectoderm-derived structure4.79e-3395
ectoderm4.79e-3395
presumptive ectoderm4.79e-3395
neurectoderm5.69e-3164
neural plate5.69e-3164
presumptive neural plate5.69e-3164
brain1.66e-3047
future brain1.66e-3047
brain grey matter2.17e-2929
regional part of telencephalon2.17e-2929
telencephalon2.17e-2929
regional part of brain2.24e-2946
ecto-epithelium3.96e-2773
anterior neural tube2.49e-2540
structure with developmental contribution from neural crest3.61e-2492
regional part of forebrain5.70e-2439
forebrain5.70e-2439
future forebrain5.70e-2439
cerebral cortex1.54e-2121
cerebral hemisphere1.54e-2121
pallium1.54e-2121
pre-chordal neural plate4.06e-1949
regional part of cerebral cortex2.63e-1617
occipital lobe6.09e-1610
visual cortex6.09e-1610
neocortex6.09e-1610
posterior neural tube2.69e-1112
chordal neural plate2.69e-1112
tube9.33e-11114
anatomical conduit4.59e-10122
organ system subdivision5.56e-10194
basal ganglion7.94e-098
nuclear complex of neuraxis7.94e-098
aggregate regional part of brain7.94e-098
collection of basal ganglia7.94e-098
cerebral subcortex7.94e-098
spinal cord4.44e-086
dorsal region element4.44e-086
dorsum4.44e-086
regional part of midbrain4.57e-074
midbrain4.57e-074
presumptive midbrain4.57e-074
midbrain neural tube4.57e-074
regional part of spinal cord5.55e-075
gray matter of spinal cord5.55e-075
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