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FFCP PHASE1:Mm9::chr6:148392813..148392825,-: Difference between revisions

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{{FFCP|EntrezGene=387314|HGNC=|MCL_coexpression_id=3553|UniProt=Q3UV71|association_with_transcript=48bp_to_NM_198967,uc009eti.2,uc009etj.2_5end|description=CAGE_peak_3_at_Tmtc1_5end|id=chr6:148392813..148392825,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!5.51e-10!122;UBERON:0001049!1.46e-09!52;UBERON:0005068!1.46e-09!52;UBERON:0006241!1.46e-09!52;UBERON:0007135!1.46e-09!52;UBERON:0004121!3.78e-09!102;UBERON:0000924!3.78e-09!102;UBERON:0006601!3.78e-09!102;UBERON:0000955!7.89e-09!50;UBERON:0006238!7.89e-09!50;UBERON:0000025!8.39e-09!114;UBERON:0000033!1.84e-08!63;UBERON:0002346!1.93e-08!71;UBERON:0003075!1.93e-08!71;UBERON:0007284!1.93e-08!71;UBERON:0002616!2.71e-08!49;UBERON:0001017!3.01e-08!73;UBERON:0005743!3.01e-08!73;UBERON:0000468!1.14e-07!333;UBERON:0002048!1.28e-07!14;UBERON:0000117!1.28e-07!14;UBERON:0000171!1.28e-07!14;UBERON:0000170!1.28e-07!14;UBERON:0005597!1.28e-07!14;UBERON:0000118!1.28e-07!14;UBERON:0000073!1.40e-07!75;UBERON:0001016!1.40e-07!75;UBERON:0003080!4.41e-07!40;UBERON:0002780!7.34e-07!39;UBERON:0001890!7.34e-07!39;UBERON:0006240!7.34e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.13e-10,122;UBERON:0000025,1.27e-10,114;UBERON:0000073,6.71e-10,54;UBERON:0001049,1.68e-09,52;UBERON:0005068,1.68e-09,52;UBERON:0006241,1.68e-09,52;UBERON:0007135,1.68e-09,52;UBERON:0002048,1.17e-08,14;UBERON:0000117,1.17e-08,14;UBERON:0000171,1.17e-08,14;UBERON:0000170,1.17e-08,14;UBERON:0005597,1.17e-08,14;UBERON:0000118,1.17e-08,14;UBERON:0010314,1.53e-08,92;UBERON:0000955,3.83e-08,47;UBERON:0006238,3.83e-08,47;UBERON:0002616,1.73e-07,46;UBERON:0003080,4.64e-07,40;UBERON:0002346,5.59e-07,64;UBERON:0003075,5.59e-07,64;UBERON:0007284,5.59e-07,64;UBERON:0002780,9.08e-07,39;UBERON:0001890,9.08e-07,39;UBERON:0006240,9.08e-07,39|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,0,0.439372365468944,0,1.25987779462826,0,0,0,0,0.257259436035947,2.86533439938757,1.54701627683233,0.606949382578793,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,0.933206510776299,1.62007125998029,0.841299845405528,0.856952953211411,1.32521124570968,0.367472397644862,0.383381884072945,0,1.10115880999389,1.65993539510744,1.0752457327937,0.131886287730194,0.548925861614458,1.04182674111352,0,2.25105044012672,1.83357897332172,1.47314292736834,2.98980529678116,1.86399445825301,0,0.0755715601067855,2.02905142091174,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.742210695324124,0.346970653532272,1.21786191324856,1.61430848079241,1.20578112442098,1.99900802130698,0.251333182659351,2.71914464507811,2.02439099687876,0.884610551949874,1.29413479957927,1.10420759230197,1.45462575940567,1.86391761218122,0.585561594023094,0.628340120440365,0.510914110417183,0,0,0,1.19832511523858,1.83000241127451,0.376963056338593,2.78118912307642,2.30143911597297,1.24672826735736,2.27137768294861,1.62942982160506,0.622034853050465,0.252722758433675,0.420883711772948,0,0.459804208866946,0.180062129805349,0.60281927134286,1.49680298132921,1.15302348256365,0.655912071918102,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,2.43776516565517,1.64625709126355,0.398068533636986,0,0,0,0.207125772535502,0.938104239924385,0,0.473489471170421,1.57411385397923,0.617068451549513,1.16266972375204,0.536546802799238,3.61972561338225,0.987359099480883,0.32833492815819,2.26992666728396,1.90059983652932,0.658650345873152,2.81833479396781,1.05144974282064,0.411618449517138,0,0.793351699990633,0.853153002140936,0.696710015581316,1.03093969057675,0.201683524623343,1.33426826306922,0.760902504450237,0,0.494096864172033,0.502670417600539,1.79060824837036,0.779856348476481,0,0.216138049874694,0.398282546508734,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.771494018793504,0.69560190836683,0.738050739898011,0.941992367048249,0.370191491765402,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0.964887042726734,5.35784251483154,0.947457058852424,0.651859905768103,1.18821560042632,1.17345124144251,2.1775813467436,2.38043640886014,1.95133647857799,4.88668946729192,2.6575762757853,3.6674596791222,4.42430949732493,2.93564469172023,3.61622646453779,0,0,0,0.551873492609465,1.60550589987792,1.64096361229084,0,2.27223834483936,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,4.81981974632711,1.70328102249922,0.534196811001766,0.651547837414304,1.81467135269789,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.307435147943927,1.03371317267288,0.363533729477506,0,0.632073515871632,0,0,1.02131881726136,0.540183282093931,1.16422815404479,1.71469628025274,2.12808280370728,4.28085162244969,2.79733335023606,1.2178597964584,1.64270195644597,0.847328283455281,0.661585194164886,2.30840754118072,0.807322133479528,0.482503399425247,0.596861720015682,1.64140899745061,1.1659233465194,2.03967832211561,0.170870880797853,0.412773735926445,0,0,0.27338845544205,0,0,0.139951452323658,0,0,0.790839983952838,0.813277868507395,1.18805874903981,0.627264888043406,1.52853794622324,0.809186078308924,1.48776220305605,0.26175594198403,0.90730481304255,0.621339313086926,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,1.01373675294467,1.29092962510329,0.39061315453185,0.734015410979976,0.241584120826006,1.15212002503146,0,0,0.308132871494482,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,2.26730383615211,0,0,0,1.54551675225752,1.68914227906064,0.549454872801795,0.857473516316263,1.50471631210609,2.25900737046827,1.38097570952153,1.71868654031819,3.26521046453006,2.05524755931193,0.755393897389701,0.675022500231806,2.70192721934532,3.17199686288943,3.10656187051092,0,1.59609949360412,0.682934423016537,0.243106717068294,0.209613162627982,0,1.11123363900808,1.85431551515005,1.28367683836726,0.252697211763798,1.01391719956096,1.88626341386076,1.591905626988,0.448176066834085,0.918967503289812,0.952587382566147,0.811190281613988,1.35036454324594,0.824171801606613,0.883193520806384,1.71434626192708,0.532427418478012,0.953744759789284,2.0348498328526,1.50575008664529,1.26921911837515,1.09756783723664,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,1.18205378850676,1.63692417267876,0.619747364743864,0.771626443924566,0.999242311751784,0.701794825336225,0.429742108096597,2.10417165275728,1.98532277207564,2.31867835620421|short_description=p3@Tmtc1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=387314
|HGNC=
|MCL_coexpression_id=3553
|TSSclassifier=NA
|UniProt=Q3UV71
|association_with_transcript=48bp_to_NM_198967,uc009eti.2,uc009etj.2_5end
|cluster_id=chr6:148392813..148392825,-
|description=CAGE_peak_3_at_Tmtc1_5end
|id=chr6:148392813..148392825,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!5.51e-10!122;UBERON:0001049!1.46e-09!52;UBERON:0005068!1.46e-09!52;UBERON:0006241!1.46e-09!52;UBERON:0007135!1.46e-09!52;UBERON:0004121!3.78e-09!102;UBERON:0000924!3.78e-09!102;UBERON:0006601!3.78e-09!102;UBERON:0000955!7.89e-09!50;UBERON:0006238!7.89e-09!50;UBERON:0000025!8.39e-09!114;UBERON:0000033!1.84e-08!63;UBERON:0002346!1.93e-08!71;UBERON:0003075!1.93e-08!71;UBERON:0007284!1.93e-08!71;UBERON:0002616!2.71e-08!49;UBERON:0001017!3.01e-08!73;UBERON:0005743!3.01e-08!73;UBERON:0000468!1.14e-07!333;UBERON:0002048!1.28e-07!14;UBERON:0000117!1.28e-07!14;UBERON:0000171!1.28e-07!14;UBERON:0000170!1.28e-07!14;UBERON:0005597!1.28e-07!14;UBERON:0000118!1.28e-07!14;UBERON:0000073!1.40e-07!75;UBERON:0001016!1.40e-07!75;UBERON:0003080!4.41e-07!40;UBERON:0002780!7.34e-07!39;UBERON:0001890!7.34e-07!39;UBERON:0006240!7.34e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.13e-10,122;UBERON:0000025,1.27e-10,114;UBERON:0000073,6.71e-10,54;UBERON:0001049,1.68e-09,52;UBERON:0005068,1.68e-09,52;UBERON:0006241,1.68e-09,52;UBERON:0007135,1.68e-09,52;UBERON:0002048,1.17e-08,14;UBERON:0000117,1.17e-08,14;UBERON:0000171,1.17e-08,14;UBERON:0000170,1.17e-08,14;UBERON:0005597,1.17e-08,14;UBERON:0000118,1.17e-08,14;UBERON:0010314,1.53e-08,92;UBERON:0000955,3.83e-08,47;UBERON:0006238,3.83e-08,47;UBERON:0002616,1.73e-07,46;UBERON:0003080,4.64e-07,40;UBERON:0002346,5.59e-07,64;UBERON:0003075,5.59e-07,64;UBERON:0007284,5.59e-07,64;UBERON:0002780,9.08e-07,39;UBERON:0001890,9.08e-07,39;UBERON:0006240,9.08e-07,39
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,0,0.439372365468944,0,1.25987779462826,0,0,0,0,0.257259436035947,2.86533439938757,1.54701627683233,0.606949382578793,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,0.933206510776299,1.62007125998029,0.841299845405528,0.856952953211411,1.32521124570968,0.367472397644862,0.383381884072945,0,1.10115880999389,1.65993539510744,1.0752457327937,0.131886287730194,0.548925861614458,1.04182674111352,0,2.25105044012672,1.83357897332172,1.47314292736834,2.98980529678116,1.86399445825301,0,0.0755715601067855,2.02905142091174,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.742210695324124,0.346970653532272,1.21786191324856,1.61430848079241,1.20578112442098,1.99900802130698,0.251333182659351,2.71914464507811,2.02439099687876,0.884610551949874,1.29413479957927,1.10420759230197,1.45462575940567,1.86391761218122,0.585561594023094,0.628340120440365,0.510914110417183,0,0,0,1.19832511523858,1.83000241127451,0.376963056338593,2.78118912307642,2.30143911597297,1.24672826735736,2.27137768294861,1.62942982160506,0.622034853050465,0.252722758433675,0.420883711772948,0,0.459804208866946,0.180062129805349,0.60281927134286,1.49680298132921,1.15302348256365,0.655912071918102,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,2.43776516565517,1.64625709126355,0.398068533636986,0,0,0,0.207125772535502,0.938104239924385,0,0.473489471170421,1.57411385397923,0.617068451549513,1.16266972375204,0.536546802799238,3.61972561338225,0.987359099480883,0.32833492815819,2.26992666728396,1.90059983652932,0.658650345873152,2.81833479396781,1.05144974282064,0.411618449517138,0,0.793351699990633,0.853153002140936,0.696710015581316,1.03093969057675,0.201683524623343,1.33426826306922,0.760902504450237,0,0.494096864172033,0.502670417600539,1.79060824837036,0.779856348476481,0,0.216138049874694,0.398282546508734,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.771494018793504,0.69560190836683,0.738050739898011,0.941992367048249,0.370191491765402,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0.964887042726734,5.35784251483154,0.947457058852424,0.651859905768103,1.18821560042632,1.17345124144251,2.1775813467436,2.38043640886014,1.95133647857799,4.88668946729192,2.6575762757853,3.6674596791222,4.42430949732493,2.93564469172023,3.61622646453779,0,0,0,0.551873492609465,1.60550589987792,1.64096361229084,0,2.27223834483936,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,4.81981974632711,1.70328102249922,0.534196811001766,0.651547837414304,1.81467135269789,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.307435147943927,1.03371317267288,0.363533729477506,0,0.632073515871632,0,0,1.02131881726136,0.540183282093931,1.16422815404479,1.71469628025274,2.12808280370728,4.28085162244969,2.79733335023606,1.2178597964584,1.64270195644597,0.847328283455281,0.661585194164886,2.30840754118072,0.807322133479528,0.482503399425247,0.596861720015682,1.64140899745061,1.1659233465194,2.03967832211561,0.170870880797853,0.412773735926445,0,0,0.27338845544205,0,0,0.139951452323658,0,0,0.790839983952838,0.813277868507395,1.18805874903981,0.627264888043406,1.52853794622324,0.809186078308924,1.48776220305605,0.26175594198403,0.90730481304255,0.621339313086926,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,1.01373675294467,1.29092962510329,0.39061315453185,0.734015410979976,0.241584120826006,1.15212002503146,0,0,0.308132871494482,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,2.26730383615211,0,0,0,1.54551675225752,1.68914227906064,0.549454872801795,0.857473516316263,1.50471631210609,2.25900737046827,1.38097570952153,1.71868654031819,3.26521046453006,2.05524755931193,0.755393897389701,0.675022500231806,2.70192721934532,3.17199686288943,3.10656187051092,0,1.59609949360412,0.682934423016537,0.243106717068294,0.209613162627982,0,1.11123363900808,1.85431551515005,1.28367683836726,0.252697211763798,1.01391719956096,1.88626341386076,1.591905626988,0.448176066834085,0.918967503289812,0.952587382566147,0.811190281613988,1.35036454324594,0.824171801606613,0.883193520806384,1.71434626192708,0.532427418478012,0.953744759789284,2.0348498328526,1.50575008664529,1.26921911837515,1.09756783723664,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,1.18205378850676,1.63692417267876,0.619747364743864,0.771626443924566,0.999242311751784,0.701794825336225,0.429742108096597,2.10417165275728,1.98532277207564,2.31867835620421
|short_description=p3@Tmtc1
}}

Latest revision as of 22:50, 26 September 2015

Short description:p3@Tmtc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tmtc1_5end
Coexpression cluster:MCL_coexpression_mm9:3553
Association with transcript: 48bp_to_NM_198967, uc009eti.2, uc009etj.2_5end
EntrezGene:Tmtc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tmtc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.61
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit1.13e-10122
tube1.27e-10114
regional part of nervous system6.71e-1054
neural tube1.68e-0952
neural rod1.68e-0952
future spinal cord1.68e-0952
neural keel1.68e-0952
lung1.17e-0814
respiratory tube1.17e-0814
respiration organ1.17e-0814
pair of lungs1.17e-0814
lung primordium1.17e-0814
lung bud1.17e-0814
structure with developmental contribution from neural crest1.53e-0892
brain3.83e-0847
future brain3.83e-0847
regional part of brain1.73e-0746
anterior neural tube4.64e-0740
neurectoderm5.59e-0764
neural plate5.59e-0764
presumptive neural plate5.59e-0764
regional part of forebrain9.08e-0739
forebrain9.08e-0739
future forebrain9.08e-0739
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