Personal tools

FFCP PHASE1:Mm9::chr7:6683398..6683427,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=57775
|EntrezGene=57775
|HGNC=
|HGNC=
|MCL_coexpression_id=483
|TSSclassifier=NA
|UniProt=Q8CAH4,Q9ES63
|UniProt=Q8CAH4,Q9ES63
|association_with_transcript=-24bp_to_NM_021323,uc009fby.1,uc009fbz.1,uc009fca.1,uc009fcb.1_5end
|association_with_transcript=-24bp_to_NM_021323,uc009fby.1,uc009fbz.1,uc009fca.1,uc009fcb.1_5end
|cluster_id=chr7:6683398..6683427,+
|description=CAGE_peak_2_at_Usp29_5end
|description=CAGE_peak_2_at_Usp29_5end
|id=chr7:6683398..6683427,+
|id=chr7:6683398..6683427,+
|ontology_enrichment_celltype=CL:0000117!2.55e-07!23;CL:0000337!2.55e-07!23
|ontology_enrichment_celltype=CL:0000117!2.55e-07!23;CL:0000337!2.55e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.59e-07,23;CL:0000337,3.59e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.07e-17!52;UBERON:0005068!5.07e-17!52;UBERON:0006241!5.07e-17!52;UBERON:0007135!5.07e-17!52;UBERON:0000955!8.82e-17!50;UBERON:0006238!8.82e-17!50;UBERON:0002616!4.33e-16!49;UBERON:0002346!1.02e-15!71;UBERON:0003075!1.02e-15!71;UBERON:0007284!1.02e-15!71;UBERON:0000033!1.41e-15!63;UBERON:0003056!3.17e-14!49;UBERON:0001017!7.67e-14!73;UBERON:0005743!7.67e-14!73;UBERON:0003080!1.19e-13!40;UBERON:0000073!4.38e-13!75;UBERON:0001016!4.38e-13!75;UBERON:0002780!6.05e-13!39;UBERON:0001890!6.05e-13!39;UBERON:0006240!6.05e-13!39;UBERON:0004121!1.79e-11!102;UBERON:0000924!1.79e-11!102;UBERON:0006601!1.79e-11!102;UBERON:0002020!7.37e-10!34;UBERON:0000153!3.49e-08!94;UBERON:0002791!9.12e-08!29;UBERON:0003528!9.12e-08!29;UBERON:0001893!9.12e-08!29;UBERON:0000468!2.97e-07!333;UBERON:0001894!7.07e-07!10;UBERON:0006222!7.07e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.91e-22,54;UBERON:0001049,4.13e-20,52;UBERON:0005068,4.13e-20,52;UBERON:0006241,4.13e-20,52;UBERON:0007135,4.13e-20,52;UBERON:0002346,2.06e-17,64;UBERON:0003075,2.06e-17,64;UBERON:0007284,2.06e-17,64;UBERON:0000955,2.43e-17,47;UBERON:0006238,2.43e-17,47;UBERON:0002616,1.55e-16,46;UBERON:0003080,1.34e-15,40;UBERON:0001017,6.41e-15,73;UBERON:0002780,9.33e-15,39;UBERON:0001890,9.33e-15,39;UBERON:0006240,9.33e-15,39;UBERON:0003056,1.16e-14,49;UBERON:0001016,5.18e-14,75;UBERON:0010371,1.29e-13,73;UBERON:0010314,1.45e-11,92;UBERON:0002020,4.42e-11,34;UBERON:0004121,1.09e-10,95;UBERON:0000924,1.09e-10,95;UBERON:0006601,1.09e-10,95;UBERON:0003528,1.36e-08,29;UBERON:0002791,1.36e-08,29;UBERON:0001893,1.36e-08,29;UBERON:0001894,5.49e-08,10;UBERON:0006222,5.49e-08,10
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,1.24427534770173,1.62007125998029,0.420649922702764,1.42825492201902,3.09215957332259,1.46988959057945,0.958454710182364,0,6.60695285996332,5.36286819957788,6.91229399653096,1.58263545276233,1.9212405156506,3.64639359389732,3.07101298901519,5.06486349028512,4.73674568108111,5.30331453852602,9.5389026135399,2.42319279572891,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,1.90833859442749,1.52232739156071,1.15307748628029,0.753613202763113,1.41106448562846,0,0.988779870937496,0,0,2.75003644910596,0.220841518460394,0.484875253135222,0,2.92780797011547,1.8850203613211,0,0,0,0,10.9347166765521,10.5225138648284,5.6544458450789,4.51943232499919,3.06858548796397,7.68815764870372,9.5722345209977,1.93494791315601,0.124406970610093,0,0.420883711772948,1.17108398666433,1.14951052216736,1.44049703844279,1.9591626318643,0.95251098811859,1.2811372028485,0.655912071918102,1.55222022443409,0.646703978798527,3.21480336285293,1.75951124163949,1.09597866213787,3.61461423993277,3.48252166522167,3.70407845534298,1.19420560091096,0,0,0,3.10688658803253,2.11073453982987,1.62055855314913,0.710234206755631,0.196764231747404,1.69693824176116,0.697601834251224,1.07309360559848,0.467061369468678,0,0,0.0810688095458557,0,0.219550115291051,0,3.78521907415429,2.88132914661996,0,0,2.55945900642281,3.0190767341857,1.15980715189884,0.80673409849337,0.889512175379481,1.52180500890047,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.758671603812327,1.02823661348756,0,0.610953983535943,0.193952487167626,0.49095073923223,0.126473074248515,0.147610147979602,0,0,0,0.667380422864376,0.589676985339609,0.449724224769707,1.42002084971952,0.241177159752417,0,0,1.78348749452539,0,2.87536413054709,0.372140947668503,0,0,0,0,0,2.4633883530163,1.14075483509418,1.35796068620151,0.469380496577004,0.502518772325447,0,0.390267295715598,0,0.664394068946325,0.318909537314974,0,0,0,0,0,0,0,5.29816946959713,5.97779601620236,0,0.504941854408746,0,0,0.646270193198397,0.238968797952552,0,0.283076530788832,0,0.584511715822624,0.395287777946524,6.42642632843614,0,0.712262414669021,1.14020871547503,0,0,2.91336763385978,1.51161778482376,2.82907619633847,0.590603785761546,1.84461088766356,1.03371317267288,1.09060118843252,1.06949213515416,0.316036757935816,0,1.03135543248187,3.06395645178409,3.42116078659489,3.75140182969988,6.64444808597936,4.78818630834139,3.21063871683727,3.29098041204242,1.8267896946876,0.23467170806371,0.847328283455281,0,0,1.45317984026315,0.482503399425247,0.596861720015682,0,0.291480836629851,4.45020724825223,0,0.412773735926445,0,0,0,0,0,0,0,0,2.68885594543965,1.01659733563424,0.972048067396211,1.25452977608681,1.52853794622324,0.404593039154462,0.165306911450672,0.26175594198403,0,0,0,2.0932316446157,0.827292452285488,1.16670713006429,0.387479470433193,1.01373675294467,1.05621514781179,0,0.209718688851422,0,0,0,1.01362607645082,0.821687657318618,0,0.358053391334963,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0,0,0,1.12950368523413,4.14292712856459,2.86447756719698,1.89038500578056,4.11049511862385,1.5107877947794,3.37511250115903,2.70192721934532,2.26571204492102,2.07104124700728,3.21740777510948,4.78829848081237,3.07320490357441,3.8897074730927,2.93458427679175,2.20612210140017,2.889207461421,2.47242068686673,0.64183841918363,2.02157769411038,3.04175159868288,2.45214243801899,2.99652823903624,3.58540853467268,3.10151532360312,3.33405583898152,2.31768651889711,2.89363830695558,2.06042950401653,2.50238164228475,5.14303878578123,1.95223386775271,1.66905332963125,3.34296758254356,3.95259397744389,2.28459441307527,2.0122077016005,2.89376682581627,3.39510284614654,2.80571135828869,1.18635018124174,2.1670986122624,2.04615521584845,2.47898945897546,3.47231899766054,1.74867404556562,3.27504251823572,2.57845264857958,3.63447830930802,1.98532277207564,0.695603506861264
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,1.24427534770173,1.62007125998029,0.420649922702764,1.42825492201902,3.09215957332259,1.46988959057945,0.958454710182364,0,6.60695285996332,5.36286819957788,6.91229399653096,1.58263545276233,1.9212405156506,3.64639359389732,3.07101298901519,5.06486349028512,4.73674568108111,5.30331453852602,9.5389026135399,2.42319279572891,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,1.90833859442749,1.52232739156071,1.15307748628029,0.753613202763113,1.41106448562846,0,0.988779870937496,0,0,2.75003644910596,0.220841518460394,0.484875253135222,0,2.92780797011547,1.8850203613211,0,0,0,0,10.9347166765521,10.5225138648284,5.6544458450789,4.51943232499919,3.06858548796397,7.68815764870372,9.5722345209977,1.93494791315601,0.124406970610093,0,0.420883711772948,1.17108398666433,1.14951052216736,1.44049703844279,1.9591626318643,0.95251098811859,1.2811372028485,0.655912071918102,1.55222022443409,0.646703978798527,3.21480336285293,1.75951124163949,1.09597866213787,3.61461423993277,3.48252166522167,3.70407845534298,1.19420560091096,0,0,0,3.10688658803253,2.11073453982987,1.62055855314913,0.710234206755631,0.196764231747404,1.69693824176116,0.697601834251224,1.07309360559848,0.467061369468678,0,0,0.0810688095458557,0,0.219550115291051,0,3.78521907415429,2.88132914661996,0,0,2.55945900642281,3.0190767341857,1.15980715189884,0.80673409849337,0.889512175379481,1.52180500890047,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.758671603812327,1.02823661348756,0,0.610953983535943,0.193952487167626,0.49095073923223,0.126473074248515,0.147610147979602,0,0,0,0.667380422864376,0.589676985339609,0.449724224769707,1.42002084971952,0.241177159752417,0,0,1.78348749452539,0,2.87536413054709,0.372140947668503,0,0,0,0,0,2.4633883530163,1.14075483509418,1.35796068620151,0.469380496577004,0.502518772325447,0,0.390267295715598,0,0.664394068946325,0.318909537314974,0,0,0,0,0,0,0,5.29816946959713,5.97779601620236,0,0.504941854408746,0,0,0.646270193198397,0.238968797952552,0,0.283076530788832,0,0.584511715822624,0.395287777946524,6.42642632843614,0,0.712262414669021,1.14020871547503,0,0,2.91336763385978,1.51161778482376,2.82907619633847,0.590603785761546,1.84461088766356,1.03371317267288,1.09060118843252,1.06949213515416,0.316036757935816,0,1.03135543248187,3.06395645178409,3.42116078659489,3.75140182969988,6.64444808597936,4.78818630834139,3.21063871683727,3.29098041204242,1.8267896946876,0.23467170806371,0.847328283455281,0,0,1.45317984026315,0.482503399425247,0.596861720015682,0,0.291480836629851,4.45020724825223,0,0.412773735926445,0,0,0,0,0,0,0,0,2.68885594543965,1.01659733563424,0.972048067396211,1.25452977608681,1.52853794622324,0.404593039154462,0.165306911450672,0.26175594198403,0,0,0,2.0932316446157,0.827292452285488,1.16670713006429,0.387479470433193,1.01373675294467,1.05621514781179,0,0.209718688851422,0,0,0,1.01362607645082,0.821687657318618,0,0.358053391334963,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.19318959403219,0,0,0,0,1.12950368523413,4.14292712856459,2.86447756719698,1.89038500578056,4.11049511862385,1.5107877947794,3.37511250115903,2.70192721934532,2.26571204492102,2.07104124700728,3.21740777510948,4.78829848081237,3.07320490357441,3.8897074730927,2.93458427679175,2.20612210140017,2.889207461421,2.47242068686673,0.64183841918363,2.02157769411038,3.04175159868288,2.45214243801899,2.99652823903624,3.58540853467268,3.10151532360312,3.33405583898152,2.31768651889711,2.89363830695558,2.06042950401653,2.50238164228475,5.14303878578123,1.95223386775271,1.66905332963125,3.34296758254356,3.95259397744389,2.28459441307527,2.0122077016005,2.89376682581627,3.39510284614654,2.80571135828869,1.18635018124174,2.1670986122624,2.04615521584845,2.47898945897546,3.47231899766054,1.74867404556562,3.27504251823572,2.57845264857958,3.63447830930802,1.98532277207564,0.695603506861264
|short_description=p2@Usp29
|short_description=p2@Usp29
}}
}}

Latest revision as of 00:06, 27 September 2015

Short description:p2@Usp29
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Usp29_5end
Coexpression cluster:MCL_coexpression_mm9:483
Association with transcript: -24bp_to_NM_021323, uc009fby.1, uc009fbz.1, uc009fca.1, uc009fcb.1_5end
EntrezGene:Usp29
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Usp29

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.93
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F15.65
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C60.95
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A35.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C73.75
pituitary gland, embryo E14.CNhs11037.398-44A56.64
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.59e-0723
neuroblast (sensu Vertebrata)3.59e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.91e-2254
neural tube4.13e-2052
neural rod4.13e-2052
future spinal cord4.13e-2052
neural keel4.13e-2052
neurectoderm2.06e-1764
neural plate2.06e-1764
presumptive neural plate2.06e-1764
brain2.43e-1747
future brain2.43e-1747
regional part of brain1.55e-1646
anterior neural tube1.34e-1540
central nervous system6.41e-1573
regional part of forebrain9.33e-1539
forebrain9.33e-1539
future forebrain9.33e-1539
pre-chordal neural plate1.16e-1449
nervous system5.18e-1475
ecto-epithelium1.29e-1373
structure with developmental contribution from neural crest1.45e-1192
gray matter4.42e-1134
ectoderm-derived structure1.09e-1095
ectoderm1.09e-1095
presumptive ectoderm1.09e-1095
brain grey matter1.36e-0829
regional part of telencephalon1.36e-0829
telencephalon1.36e-0829
diencephalon5.49e-0810
future diencephalon5.49e-0810
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:6683398..6683427,%2B&oldid=4281804"