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FFCP PHASE1:Mm9::chr11:116515316..116515337,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=114886
|EntrezGene=114886
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=Q9CX80,Q546K1
|UniProt=Q9CX80,Q546K1
|association_with_transcript=289bp_to_ENSMUST00000021166,NM_030206,uc007mlv.1_5end
|association_with_transcript=289bp_to_ENSMUST00000021166,NM_030206,uc007mlv.1_5end
|cluster_id=chr11:116515316..116515337,-
|description=CAGE_peak_3_at_Cygb_5end
|description=CAGE_peak_3_at_Cygb_5end
|id=chr11:116515316..116515337,-
|id=chr11:116515316..116515337,-
|ontology_enrichment_celltype=CL:0000117!1.40e-08!23;CL:0000337!1.40e-08!23
|ontology_enrichment_celltype=CL:0000117!1.40e-08!23;CL:0000337!1.40e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.33e-09,23;CL:0000337,3.33e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.01e-15!71;UBERON:0003075!3.01e-15!71;UBERON:0007284!3.01e-15!71;UBERON:0001049!1.40e-14!52;UBERON:0005068!1.40e-14!52;UBERON:0006241!1.40e-14!52;UBERON:0007135!1.40e-14!52;UBERON:0000033!8.82e-14!63;UBERON:0000955!1.42e-13!50;UBERON:0006238!1.42e-13!50;UBERON:0004121!1.75e-13!102;UBERON:0000924!1.75e-13!102;UBERON:0006601!1.75e-13!102;UBERON:0002616!5.49e-13!49;UBERON:0001017!1.06e-11!73;UBERON:0005743!1.06e-11!73;UBERON:0000073!8.71e-11!75;UBERON:0001016!8.71e-11!75;UBERON:0002020!1.39e-10!34;UBERON:0003056!2.04e-10!49;UBERON:0004111!3.33e-10!122;UBERON:0003080!1.06e-09!40;UBERON:0000025!1.17e-09!114;UBERON:0000468!1.55e-09!333;UBERON:0002780!4.12e-09!39;UBERON:0001890!4.12e-09!39;UBERON:0006240!4.12e-09!39;UBERON:0002791!6.33e-08!29;UBERON:0003528!6.33e-08!29;UBERON:0001893!6.33e-08!29;UBERON:0000479!6.34e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.74e-17,54;UBERON:0001049,1.45e-15,52;UBERON:0005068,1.45e-15,52;UBERON:0006241,1.45e-15,52;UBERON:0007135,1.45e-15,52;UBERON:0010314,1.41e-14,92;UBERON:0002346,1.34e-13,64;UBERON:0003075,1.34e-13,64;UBERON:0007284,1.34e-13,64;UBERON:0000955,1.45e-12,47;UBERON:0006238,1.45e-12,47;UBERON:0010371,2.60e-12,73;UBERON:0001017,2.80e-12,73;UBERON:0002616,5.78e-12,46;UBERON:0002020,1.11e-11,34;UBERON:0004121,2.02e-11,95;UBERON:0000924,2.02e-11,95;UBERON:0006601,2.02e-11,95;UBERON:0001016,2.93e-11,75;UBERON:0003056,1.67e-10,49;UBERON:0003080,1.96e-10,40;UBERON:0002780,8.40e-10,39;UBERON:0001890,8.40e-10,39;UBERON:0006240,8.40e-10,39;UBERON:0004111,1.21e-09,122;UBERON:0000025,4.45e-09,114;UBERON:0003528,8.24e-09,29;UBERON:0002791,8.24e-09,29;UBERON:0001893,8.24e-09,29
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,3.06155844543851,0.198581902401771,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.62203089951223,2.38610777810186,1.56478268869608,0.218025156380447,0,0,0,0,0,0,0,2.57259436035947,10.0286703978565,1.03134418455488,4.04632921719196,3.1739458756322,3.1691570175309,0.338844532069132,0,1.3498495759221,0.988866362566974,0,0,0.384218305321555,4.56234294157302,3.78016627328734,3.78584930432488,12.8542942981712,9.05561017901615,1.46988959057945,1.62937300731002,0,16.5173821499083,18.8977260366078,22.733766921924,4.87979264601717,4.57438218012048,2.6045668527838,27.9182999001381,9.56696437053856,16.5022107598955,11.1958862479994,10.2507610175354,7.64237727883732,0.075726193333184,0.151143120213571,0.579728977403356,1.72084775396277,0.679971333707751,0,0,0.448026887097336,2.80888840263504,0.340860645156116,1.03914401841148,0,1.12674735821344,0,0,0,0,0,0,1.02765491747154,1.55362730188303,8.16431764856536,2.4287945747259,5.78484408793068,3.68984795609694,1.80867168663147,2.11659672844269,2.51333182659351,2.47194967734374,4.19338135067744,0,1.29413479957927,1.54589062922275,0,0,10.2473278954042,8.58731497935166,2.04365644166873,0,0,0,42.6903322303745,22.8750301409313,3.64397621127307,9.90798625095976,8.69432554923124,21.8177446787538,16.3863675698435,6.72139801412087,1.7416975885413,2.27450482590307,5.89237196482127,0.260240885925407,0.919608417733892,0.900310649026746,1.80845781402858,4.21826294738233,3.45907044769094,4.59138450342671,11.3829483125167,0.646703978798527,0.756424320671277,1.05570674498369,1.97276159184817,0.834141747676794,3.1342694986995,2.88094990971121,2.58744546864041,0,0,0,0,0.703578179943289,0,1.42046841351126,0.590292695242212,1.85120535464854,1.62773761325285,1.3413670069981,1.86824547787471,2.46839774870221,2.29834449710733,4.86412857275134,4.82459958503597,4.39100230582101,3.62357330653004,13.6688466566683,5.35103984372279,0,0.528901133327089,0.853153002140936,0.696710015581316,1.80414445850931,1.21010114774006,2.44615848229357,1.71203063501303,2.37264530772256,1.4822905925161,3.77002813200404,4.57599885694647,5.06906626509712,0.898819408654221,2.80979464837102,1.39398891278057,2.0863469104839,0.799739588268102,3.38123207019241,1.4255592949172,1.55161989734101,2.94570443539338,2.65593455921881,0.885660887877613,0.784993639206874,1.23397163921801,0.592905254174298,0.500535317148282,0.589676985339609,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,1.45921704097532,0.823684239564244,2.87536413054709,3.34926852901653,1.5601883655728,1.26289438973556,1.25578189465339,0,1.29327233116623,1.13694847062291,0.325929952884052,0.678980343100753,1.40814148973101,2.1775813467436,4.76087281772027,3.90267295715598,2.67979744980525,5.53661724121937,3.98636921643718,1.47476983244164,0.863424909329478,1.73578870297814,0,0,0.983528546038072,0.827810238914197,31.3073650476194,28.1308047821288,0,3.28212205365685,0,0.780877488593277,0.646270193198397,0,0.891194696329576,0.283076530788832,2.42886421004937,2.04579100537918,1.58115111178609,13.4954952897159,6.95506417520516,4.09550888434687,7.32991317091092,6.43383479592888,0,0.485561272309963,0.906970670894253,0.377210159511796,2.65771703592696,3.07435147943927,4.39328098385976,3.27180356529755,3.20847640546249,2.21225730555071,1.05418608574999,2.06271086496374,1.36175842301515,0.720244376125241,1.55230420539305,1.50035924522115,3.72414490648775,2.14042581122485,4.27827453565514,5.78483403317739,0.469343416127421,0,1.98475558249466,3.13283880588812,1.93757312035087,2.17126529741361,2.14870219205646,1.80554989719567,2.91480836629851,23.9198639593557,1.19609616558497,1.03193433981611,0.185194527369712,0,0.410082683163076,0.228778173206523,0,0,0,0.954670618015114,0.790839983952838,1.82987520414164,2.37611749807963,3.3454127362315,2.18362563746178,2.83215127408124,5.2898211664215,3.40282724579238,1.94422459937689,1.86401793926078,0,2.8408143748356,3.80554528051325,5.63908446197738,6.32883135040882,5.06868376472335,9.03650737572305,5.07797100891405,3.14578033277133,0.966336483304024,0.576060012515731,0.632022241256357,0.608175645870493,0.821687657318618,0.649604114888975,0,0.39736270956253,0.600977247599844,0.590758108698309,0.302899349844443,0.15241361331,0.302478555410522,0.38983152295901,0.192423683280659,0.350630706544707,2.26730383615211,0,0,0.167884616364078,6.37525660306228,1.50145980360946,4.94509385521616,4.28736758158132,1.00314420807073,4.51801474093653,3.22227665555024,3.43737308063638,3.60891682921744,8.22099023724771,6.7985450765073,4.72515750162264,5.40385443869065,6.79713613476307,10.3552062350364,0.415149390336707,3.19219898720825,1.19513524027894,1.21553358534147,1.88651846365184,2.02227859295016,1.33348036680969,1.44224540067226,1.92551525755089,2.52697211763797,3.29523089857312,1.50901073108861,2.52832070168682,3.39333307745807,2.41228969613576,2.38146845641537,2.54945517078682,2.12200142510076,1.23625770240992,2.06078488188156,2.40008476669791,1.77475806159337,1.66905332963125,2.18019624948493,2.1645157495526,2.11536519729191,2.0122077016005,1.8414879800649,1.7654534799962,2.24456908663095,2.60997039873183,2.26560309463796,0.818462086339379,1.70430525304563,1.35034627686799,5.24602213669686,3.04111090979031,3.65280791882107,2.29545998482612,4.19123696327079,2.55054619182464
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,3.06155844543851,0.198581902401771,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.62203089951223,2.38610777810186,1.56478268869608,0.218025156380447,0,0,0,0,0,0,0,2.57259436035947,10.0286703978565,1.03134418455488,4.04632921719196,3.1739458756322,3.1691570175309,0.338844532069132,0,1.3498495759221,0.988866362566974,0,0,0.384218305321555,4.56234294157302,3.78016627328734,3.78584930432488,12.8542942981712,9.05561017901615,1.46988959057945,1.62937300731002,0,16.5173821499083,18.8977260366078,22.733766921924,4.87979264601717,4.57438218012048,2.6045668527838,27.9182999001381,9.56696437053856,16.5022107598955,11.1958862479994,10.2507610175354,7.64237727883732,0.075726193333184,0.151143120213571,0.579728977403356,1.72084775396277,0.679971333707751,0,0,0.448026887097336,2.80888840263504,0.340860645156116,1.03914401841148,0,1.12674735821344,0,0,0,0,0,0,1.02765491747154,1.55362730188303,8.16431764856536,2.4287945747259,5.78484408793068,3.68984795609694,1.80867168663147,2.11659672844269,2.51333182659351,2.47194967734374,4.19338135067744,0,1.29413479957927,1.54589062922275,0,0,10.2473278954042,8.58731497935166,2.04365644166873,0,0,0,42.6903322303745,22.8750301409313,3.64397621127307,9.90798625095976,8.69432554923124,21.8177446787538,16.3863675698435,6.72139801412087,1.7416975885413,2.27450482590307,5.89237196482127,0.260240885925407,0.919608417733892,0.900310649026746,1.80845781402858,4.21826294738233,3.45907044769094,4.59138450342671,11.3829483125167,0.646703978798527,0.756424320671277,1.05570674498369,1.97276159184817,0.834141747676794,3.1342694986995,2.88094990971121,2.58744546864041,0,0,0,0,0.703578179943289,0,1.42046841351126,0.590292695242212,1.85120535464854,1.62773761325285,1.3413670069981,1.86824547787471,2.46839774870221,2.29834449710733,4.86412857275134,4.82459958503597,4.39100230582101,3.62357330653004,13.6688466566683,5.35103984372279,0,0.528901133327089,0.853153002140936,0.696710015581316,1.80414445850931,1.21010114774006,2.44615848229357,1.71203063501303,2.37264530772256,1.4822905925161,3.77002813200404,4.57599885694647,5.06906626509712,0.898819408654221,2.80979464837102,1.39398891278057,2.0863469104839,0.799739588268102,3.38123207019241,1.4255592949172,1.55161989734101,2.94570443539338,2.65593455921881,0.885660887877613,0.784993639206874,1.23397163921801,0.592905254174298,0.500535317148282,0.589676985339609,0.224862112384854,0.202860121388503,0,0.25462585178142,0.287696137450811,1.45921704097532,0.823684239564244,2.87536413054709,3.34926852901653,1.5601883655728,1.26289438973556,1.25578189465339,0,1.29327233116623,1.13694847062291,0.325929952884052,0.678980343100753,1.40814148973101,2.1775813467436,4.76087281772027,3.90267295715598,2.67979744980525,5.53661724121937,3.98636921643718,1.47476983244164,0.863424909329478,1.73578870297814,0,0,0.983528546038072,0.827810238914197,31.3073650476194,28.1308047821288,0,3.28212205365685,0,0.780877488593277,0.646270193198397,0,0.891194696329576,0.283076530788832,2.42886421004937,2.04579100537918,1.58115111178609,13.4954952897159,6.95506417520516,4.09550888434687,7.32991317091092,6.43383479592888,0,0.485561272309963,0.906970670894253,0.377210159511796,2.65771703592696,3.07435147943927,4.39328098385976,3.27180356529755,3.20847640546249,2.21225730555071,1.05418608574999,2.06271086496374,1.36175842301515,0.720244376125241,1.55230420539305,1.50035924522115,3.72414490648775,2.14042581122485,4.27827453565514,5.78483403317739,0.469343416127421,0,1.98475558249466,3.13283880588812,1.93757312035087,2.17126529741361,2.14870219205646,1.80554989719567,2.91480836629851,23.9198639593557,1.19609616558497,1.03193433981611,0.185194527369712,0,0.410082683163076,0.228778173206523,0,0,0,0.954670618015114,0.790839983952838,1.82987520414164,2.37611749807963,3.3454127362315,2.18362563746178,2.83215127408124,5.2898211664215,3.40282724579238,1.94422459937689,1.86401793926078,0,2.8408143748356,3.80554528051325,5.63908446197738,6.32883135040882,5.06868376472335,9.03650737572305,5.07797100891405,3.14578033277133,0.966336483304024,0.576060012515731,0.632022241256357,0.608175645870493,0.821687657318618,0.649604114888975,0,0.39736270956253,0.600977247599844,0.590758108698309,0.302899349844443,0.15241361331,0.302478555410522,0.38983152295901,0.192423683280659,0.350630706544707,2.26730383615211,0,0,0.167884616364078,6.37525660306228,1.50145980360946,4.94509385521616,4.28736758158132,1.00314420807073,4.51801474093653,3.22227665555024,3.43737308063638,3.60891682921744,8.22099023724771,6.7985450765073,4.72515750162264,5.40385443869065,6.79713613476307,10.3552062350364,0.415149390336707,3.19219898720825,1.19513524027894,1.21553358534147,1.88651846365184,2.02227859295016,1.33348036680969,1.44224540067226,1.92551525755089,2.52697211763797,3.29523089857312,1.50901073108861,2.52832070168682,3.39333307745807,2.41228969613576,2.38146845641537,2.54945517078682,2.12200142510076,1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|short_description=p3@Cygb
|short_description=p3@Cygb
}}
}}

Latest revision as of 00:27, 27 September 2015

Short description:p3@Cygb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cygb_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 289bp_to_ENSMUST00000021166, NM_030206, uc007mlv.1_5end
EntrezGene:Cygb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cygb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.03
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D722.73
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.92
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D78.16
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I32.51
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B210.25
cerebellum, neonate N30.CNhs11135.1395-42I28.59
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A442.69
corpus striatum, adult.CNhs10487.19-21D822.88
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D59.91
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F221.82
diencephalon, neonate N30.CNhs11201.1388-42B216.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.74
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C64.22
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G84.59
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G14.86
heart, neonate N20.CNhs11127.821-26I64.82
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E813.67
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F24.58
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.95
kidney, neonate N10.CNhs11206.758-6D52.66
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I64.76
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A35.54
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C231.31
medulla oblongata, neonate N30.CNhs11200.1396-42A328.13
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I76.96
ovary, embryo E18.CNhs11040.505-44H74.10
ovary, neonate N00.CNhs11217.1299-22I47.33
oviduct, adult pregnant day01.CNhs10500.988-6G66.43
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H32.17
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C923.92
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A95.29
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G55.64
testis, embryo E17.CNhs11029.486-18I56.33
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B79.04
testis, neonate N07.CNhs11222.726-26I45.08
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E46.38
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E54.95
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.55
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.33e-0923
neuroblast (sensu Vertebrata)3.33e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.74e-1754
neural tube1.45e-1552
neural rod1.45e-1552
future spinal cord1.45e-1552
neural keel1.45e-1552
structure with developmental contribution from neural crest1.41e-1492
neurectoderm1.34e-1364
neural plate1.34e-1364
presumptive neural plate1.34e-1364
brain1.45e-1247
future brain1.45e-1247
ecto-epithelium2.60e-1273
central nervous system2.80e-1273
regional part of brain5.78e-1246
gray matter1.11e-1134
ectoderm-derived structure2.02e-1195
ectoderm2.02e-1195
presumptive ectoderm2.02e-1195
nervous system2.93e-1175
pre-chordal neural plate1.67e-1049
anterior neural tube1.96e-1040
regional part of forebrain8.40e-1039
forebrain8.40e-1039
future forebrain8.40e-1039
anatomical conduit1.21e-09122
tube4.45e-09114
brain grey matter8.24e-0929
regional part of telencephalon8.24e-0929
telencephalon8.24e-0929
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