FFCP PHASE1:Mm9::chr11:118063929..118063943,-: Difference between revisions
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{{FFCP|EntrezGene=19157|HGNC=|MCL_coexpression_id=121|UniProt=|association_with_transcript=-145bp_to_uc007mos.1_5end|description=CAGE_peak_9_at_Cyth1_5end|id=chr11:118063929..118063943,-|ontology_enrichment_celltype=CL:0000540!5.28e-19!33;CL:0000047!5.28e-19!33;CL:0000031!5.28e-19!33;CL:0000404!5.28e-19!33;CL:0000393!1.60e-14!39;CL:0000211!1.60e-14!39;CL:0002319!1.36e-13!43;CL:0000117!3.46e-13!23;CL:0000337!3.46e-13!23;CL:0000221!6.24e-13!44;CL:0000133!6.24e-13!44;CL:0000055!3.21e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,3.19e-21,33;CL:0000047,3.19e-21,33;CL:0000031,3.19e-21,33;CL:0000404,3.19e-21,33;CL:0000393,3.56e-17,39;CL:0000211,3.56e-17,39;CL:0002319,4.14e-15,43;CL:0000221,1.19e-14,44;CL:0000133,1.19e-14,44;CL:0000117,1.52e-13,23;CL:0000337,1.52e-13,23;CL:0000107,6.47e-10,9;CL:0002610,6.07e-08,3;CL:0002321,2.00e-07,70;CL:0002614,2.59e-07,3;CL:0002613,8.54e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.57e-30!73;UBERON:0005743!3.57e-30!73;UBERON:0000073!3.21e-29!75;UBERON:0001016!3.21e-29!75;UBERON:0004121!7.41e-25!102;UBERON:0000924!7.41e-25!102;UBERON:0006601!7.41e-25!102;UBERON:0002346!7.25e-23!71;UBERON:0003075!7.25e-23!71;UBERON:0007284!7.25e-23!71;UBERON:0000033!1.27e-20!63;UBERON:0001049!1.37e-20!52;UBERON:0005068!1.37e-20!52;UBERON:0006241!1.37e-20!52;UBERON:0007135!1.37e-20!52;UBERON:0000955!8.49e-20!50;UBERON:0006238!8.49e-20!50;UBERON:0002616!3.90e-19!49;UBERON:0003056!9.77e-18!49;UBERON:0002020!2.72e-17!34;UBERON:0003080!2.96e-15!40;UBERON:0002780!1.12e-14!39;UBERON:0001890!1.12e-14!39;UBERON:0006240!1.12e-14!39;UBERON:0002791!2.39e-14!29;UBERON:0003528!2.39e-14!29;UBERON:0001893!2.39e-14!29;UBERON:0007811!3.58e-13!86;UBERON:0000153!6.81e-12!94;UBERON:0000956!2.91e-09!21;UBERON:0001869!2.91e-09!21;UBERON:0000203!2.91e-09!21;UBERON:0002619!1.11e-07!17;UBERON:0002021!2.16e-07!10;UBERON:0000411!2.16e-07!10;UBERON:0001950!2.16e-07!10;UBERON:0000025!9.80e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.39e-39,73;UBERON:0001016,2.69e-38,75;UBERON:0004121,1.64e-33,95;UBERON:0000924,1.64e-33,95;UBERON:0006601,1.64e-33,95;UBERON:0002346,6.45e-29,64;UBERON:0003075,6.45e-29,64;UBERON:0007284,6.45e-29,64;UBERON:0000073,1.61e-27,54;UBERON:0010371,2.21e-24,73;UBERON:0001049,3.53e-24,52;UBERON:0005068,3.53e-24,52;UBERON:0006241,3.53e-24,52;UBERON:0007135,3.53e-24,52;UBERON:0000955,1.12e-22,47;UBERON:0006238,1.12e-22,47;UBERON:0002616,2.67e-21,46;UBERON:0010314,1.00e-17,92;UBERON:0003056,1.07e-16,49;UBERON:0003080,3.41e-16,40;UBERON:0002020,6.20e-16,34;UBERON:0002780,5.01e-15,39;UBERON:0001890,5.01e-15,39;UBERON:0006240,5.01e-15,39;UBERON:0003528,6.79e-15,29;UBERON:0002791,6.79e-15,29;UBERON:0001893,6.79e-15,29;UBERON:0002420,1.45e-12,8;UBERON:0007245,1.45e-12,8;UBERON:0010009,1.45e-12,8;UBERON:0010011,1.45e-12,8;UBERON:0000454,1.45e-12,8;UBERON:0002410,6.47e-10,9;UBERON:0002021,1.56e-09,10;UBERON:0000411,1.56e-09,10;UBERON:0001950,1.56e-09,10;UBERON:0011216,2.13e-09,194;UBERON:0003076,8.21e-09,12;UBERON:0003057,8.21e-09,12;UBERON:0002950,9.50e-09,4;UBERON:0001891,9.50e-09,4;UBERON:0009616,9.50e-09,4;UBERON:0010286,9.50e-09,4;UBERON:0004684,6.07e-08,3;UBERON:0002275,6.07e-08,3;UBERON:0000010,6.26e-08,11;UBERON:0000025,1.93e-07,114;UBERON:0002038,2.59e-07,3;UBERON:0009663,2.59e-07,3;UBERON:0009661,2.59e-07,3;UBERON:0000125,2.59e-07,3;UBERON:0002308,2.59e-07,3;UBERON:0000369,4.90e-07,5;UBERON:0002435,4.90e-07,5;UBERON:0000204,4.90e-07,5;UBERON:0010082,4.90e-07,5|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0.270011876663381,0.841299845405528,2.57085885963423,2.87129103237098,0.367472397644862,0.862609239164127,0.919218786610021,4.40463523997555,3.83062014255563,5.68344173048101,1.84640802822271,2.01272815925301,3.12548022334056,3.35019598801657,2.25105044012672,3.97275444219706,0.589257170947335,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.23517741427141,0.251333182659351,0,0,0,0,0,0,0,9.07620470735796,4.39838084308256,0,0.11981512450592,0,0.254140454146129,1.3481157546434,3.66000482254901,0.376963056338593,1.39059456153821,1.27857728665165,2.28566849015516,4.70499662896497,0.203678727700633,0.124406970610093,0,1.05220927943237,0.130120442962704,0.229902104433473,0,0.60281927134286,1.08858398642125,0.640568601424249,0.843315521037559,1.81092359517311,0,0.189106080167819,0,0,0,0.696504333044333,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0,0,0.540186184383045,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0.584799949701329,0.439100230582101,0.134206418760372,1.26173969138476,0.720332286654991,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,3.37156238974363,7.3843362553088,0,0,1.89304931649754,1.95219372148319,2.36965737506079,0.955875191810208,0.445597348164788,1.41538265394416,2.42886421004937,1.16902343164525,1.97643888973262,1.92792789853084,0,0.712262414669021,0,0,0,0,0,0.565815239267694,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.388076051348264,0.214337035031592,0,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,4.63563255026274,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.389762468933385,0.358053391334963,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0,0,3.3885110557024,2.76195141904306,2.29158205375759,1.71853182343688,0.685082519770642,4.5323633843382,1.35004500046361,0.900642406448441,2.26571204492102,0.51776031175182,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.704276676453562,0.34461281373368,0,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0,0.715308569841963,0.436039249896986,0.188218760830661,0.338458431566706,0,0,0.271608227691724,0.561142271657738,0.711810108745045,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p9@Cyth1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19157 | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-145bp_to_uc007mos.1_5end | |||
|cluster_id=chr11:118063929..118063943,- | |||
|description=CAGE_peak_9_at_Cyth1_5end | |||
|id=chr11:118063929..118063943,- | |||
|ontology_enrichment_celltype=CL:0000540!5.28e-19!33;CL:0000047!5.28e-19!33;CL:0000031!5.28e-19!33;CL:0000404!5.28e-19!33;CL:0000393!1.60e-14!39;CL:0000211!1.60e-14!39;CL:0002319!1.36e-13!43;CL:0000117!3.46e-13!23;CL:0000337!3.46e-13!23;CL:0000221!6.24e-13!44;CL:0000133!6.24e-13!44;CL:0000055!3.21e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.19e-21,33;CL:0000047,3.19e-21,33;CL:0000031,3.19e-21,33;CL:0000404,3.19e-21,33;CL:0000393,3.56e-17,39;CL:0000211,3.56e-17,39;CL:0002319,4.14e-15,43;CL:0000221,1.19e-14,44;CL:0000133,1.19e-14,44;CL:0000117,1.52e-13,23;CL:0000337,1.52e-13,23;CL:0000107,6.47e-10,9;CL:0002610,6.07e-08,3;CL:0002321,2.00e-07,70;CL:0002614,2.59e-07,3;CL:0002613,8.54e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.57e-30!73;UBERON:0005743!3.57e-30!73;UBERON:0000073!3.21e-29!75;UBERON:0001016!3.21e-29!75;UBERON:0004121!7.41e-25!102;UBERON:0000924!7.41e-25!102;UBERON:0006601!7.41e-25!102;UBERON:0002346!7.25e-23!71;UBERON:0003075!7.25e-23!71;UBERON:0007284!7.25e-23!71;UBERON:0000033!1.27e-20!63;UBERON:0001049!1.37e-20!52;UBERON:0005068!1.37e-20!52;UBERON:0006241!1.37e-20!52;UBERON:0007135!1.37e-20!52;UBERON:0000955!8.49e-20!50;UBERON:0006238!8.49e-20!50;UBERON:0002616!3.90e-19!49;UBERON:0003056!9.77e-18!49;UBERON:0002020!2.72e-17!34;UBERON:0003080!2.96e-15!40;UBERON:0002780!1.12e-14!39;UBERON:0001890!1.12e-14!39;UBERON:0006240!1.12e-14!39;UBERON:0002791!2.39e-14!29;UBERON:0003528!2.39e-14!29;UBERON:0001893!2.39e-14!29;UBERON:0007811!3.58e-13!86;UBERON:0000153!6.81e-12!94;UBERON:0000956!2.91e-09!21;UBERON:0001869!2.91e-09!21;UBERON:0000203!2.91e-09!21;UBERON:0002619!1.11e-07!17;UBERON:0002021!2.16e-07!10;UBERON:0000411!2.16e-07!10;UBERON:0001950!2.16e-07!10;UBERON:0000025!9.80e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.39e-39,73;UBERON:0001016,2.69e-38,75;UBERON:0004121,1.64e-33,95;UBERON:0000924,1.64e-33,95;UBERON:0006601,1.64e-33,95;UBERON:0002346,6.45e-29,64;UBERON:0003075,6.45e-29,64;UBERON:0007284,6.45e-29,64;UBERON:0000073,1.61e-27,54;UBERON:0010371,2.21e-24,73;UBERON:0001049,3.53e-24,52;UBERON:0005068,3.53e-24,52;UBERON:0006241,3.53e-24,52;UBERON:0007135,3.53e-24,52;UBERON:0000955,1.12e-22,47;UBERON:0006238,1.12e-22,47;UBERON:0002616,2.67e-21,46;UBERON:0010314,1.00e-17,92;UBERON:0003056,1.07e-16,49;UBERON:0003080,3.41e-16,40;UBERON:0002020,6.20e-16,34;UBERON:0002780,5.01e-15,39;UBERON:0001890,5.01e-15,39;UBERON:0006240,5.01e-15,39;UBERON:0003528,6.79e-15,29;UBERON:0002791,6.79e-15,29;UBERON:0001893,6.79e-15,29;UBERON:0002420,1.45e-12,8;UBERON:0007245,1.45e-12,8;UBERON:0010009,1.45e-12,8;UBERON:0010011,1.45e-12,8;UBERON:0000454,1.45e-12,8;UBERON:0002410,6.47e-10,9;UBERON:0002021,1.56e-09,10;UBERON:0000411,1.56e-09,10;UBERON:0001950,1.56e-09,10;UBERON:0011216,2.13e-09,194;UBERON:0003076,8.21e-09,12;UBERON:0003057,8.21e-09,12;UBERON:0002950,9.50e-09,4;UBERON:0001891,9.50e-09,4;UBERON:0009616,9.50e-09,4;UBERON:0010286,9.50e-09,4;UBERON:0004684,6.07e-08,3;UBERON:0002275,6.07e-08,3;UBERON:0000010,6.26e-08,11;UBERON:0000025,1.93e-07,114;UBERON:0002038,2.59e-07,3;UBERON:0009663,2.59e-07,3;UBERON:0009661,2.59e-07,3;UBERON:0000125,2.59e-07,3;UBERON:0002308,2.59e-07,3;UBERON:0000369,4.90e-07,5;UBERON:0002435,4.90e-07,5;UBERON:0000204,4.90e-07,5;UBERON:0010082,4.90e-07,5 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,2.64495489636016,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0.518448061542388,0.270011876663381,0.841299845405528,2.57085885963423,2.87129103237098,0.367472397644862,0.862609239164127,0.919218786610021,4.40463523997555,3.83062014255563,5.68344173048101,1.84640802822271,2.01272815925301,3.12548022334056,3.35019598801657,2.25105044012672,3.97275444219706,0.589257170947335,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.23517741427141,0.251333182659351,0,0,0,0,0,0,0,9.07620470735796,4.39838084308256,0,0.11981512450592,0,0.254140454146129,1.3481157546434,3.66000482254901,0.376963056338593,1.39059456153821,1.27857728665165,2.28566849015516,4.70499662896497,0.203678727700633,0.124406970610093,0,1.05220927943237,0.130120442962704,0.229902104433473,0,0.60281927134286,1.08858398642125,0.640568601424249,0.843315521037559,1.81092359517311,0,0.189106080167819,0,0,0,0.696504333044333,0.205782136407943,0,0.702213187313235,0.257347907114715,0,0,0,0.540186184383045,0.473489471170421,0,0.154267112887378,0,0.268273401399619,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0.584799949701329,0.439100230582101,0.134206418760372,1.26173969138476,0.720332286654991,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,3.37156238974363,7.3843362553088,0,0,1.89304931649754,1.95219372148319,2.36965737506079,0.955875191810208,0.445597348164788,1.41538265394416,2.42886421004937,1.16902343164525,1.97643888973262,1.92792789853084,0,0.712262414669021,0,0,0,0,0,0.565815239267694,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.388076051348264,0.214337035031592,0,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,4.63563255026274,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0.205421914329655,0.389762468933385,0.358053391334963,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0.179427713218951,0.167884616364078,0,0,0.183151624267265,0,0,3.3885110557024,2.76195141904306,2.29158205375759,1.71853182343688,0.685082519770642,4.5323633843382,1.35004500046361,0.900642406448441,2.26571204492102,0.51776031175182,0.415149390336707,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.187283014939765,0.704276676453562,0.34461281373368,0,0.347652977834566,0.192909220463705,0.824171801606613,0.294397840268795,0.342869252385415,0,0.715308569841963,0.436039249896986,0.188218760830661,0.338458431566706,0,0,0.271608227691724,0.561142271657738,0.711810108745045,0.197008964751127,0,0.464810523557898,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p9@Cyth1 | |||
}} |
Latest revision as of 01:31, 27 September 2015
Short description: | p9@Cyth1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Cyth1_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | -145bp_to_uc007mos.1_5end |
EntrezGene: | Cyth1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.19e-21 | 33 |
neuronal stem cell | 3.19e-21 | 33 |
neuroblast | 3.19e-21 | 33 |
electrically signaling cell | 3.19e-21 | 33 |
electrically responsive cell | 3.56e-17 | 39 |
electrically active cell | 3.56e-17 | 39 |
neural cell | 4.14e-15 | 43 |
ectodermal cell | 1.19e-14 | 44 |
neurectodermal cell | 1.19e-14 | 44 |
CNS neuron (sensu Vertebrata) | 1.52e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-13 | 23 |
autonomic neuron | 6.47e-10 | 9 |
raphe nuclei neuron | 6.07e-08 | 3 |
embryonic cell | 2.00e-07 | 70 |
neuron of the substantia nigra | 2.59e-07 | 3 |
striatum neuron | 8.54e-07 | 3 |