FFCP PHASE1:Mm9::chr13:104968878..104968952,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=81003 | |EntrezGene=81003 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=813 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGX0,E0CY80 | |UniProt=Q8BGX0,E0CY80 | ||
|association_with_transcript=0bp_to_ENSMUST00000069187,ENSMUST00000160230,uc007rsx.1,uc011zeg.1_5end | |association_with_transcript=0bp_to_ENSMUST00000069187,ENSMUST00000160230,uc007rsx.1,uc011zeg.1_5end | ||
|cluster_id=chr13:104968878..104968952,+ | |||
|description=CAGE_peak_1_at_Trim23_5end | |description=CAGE_peak_1_at_Trim23_5end | ||
|id=chr13:104968878..104968952,+ | |id=chr13:104968878..104968952,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.21e-10!63;UBERON:0007811!3.40e-09!86;UBERON:0000153!4.25e-09!94;UBERON:0002021!5.24e-08!10;UBERON:0000411!5.24e-08!10;UBERON:0001950!5.24e-08!10;UBERON:0002346!5.59e-08!71;UBERON:0003075!5.59e-08!71;UBERON:0007284!5.59e-08!71;UBERON:0000475!7.77e-08!200;UBERON:0003056!1.12e-07!49;UBERON:0000955!1.31e-07!50;UBERON:0006238!1.31e-07!50;UBERON:0002616!3.36e-07!49;UBERON:0001049!8.58e-07!52;UBERON:0005068!8.58e-07!52;UBERON:0006241!8.58e-07!52;UBERON:0007135!8.58e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.69e-09,73;UBERON:0002346,6.21e-09,64;UBERON:0003075,6.21e-09,64;UBERON:0007284,6.21e-09,64;UBERON:0010314,2.20e-08,92;UBERON:0002021,5.24e-08,10;UBERON:0000411,5.24e-08,10;UBERON:0001950,5.24e-08,10;UBERON:0003056,1.12e-07,49;UBERON:0000073,1.30e-07,54;UBERON:0004121,6.15e-07,95;UBERON:0000924,6.15e-07,95;UBERON:0006601,6.15e-07,95;UBERON:0001049,8.58e-07,52;UBERON:0005068,8.58e-07,52;UBERON:0006241,8.58e-07,52;UBERON:0007135,8.58e-07,52 | |||
|phase1_expression=32.9906625035876,8.72438519098403,8.64498554840118,6.95667686005709,9.5170188689806,9.73699777088961,9.34450562382103,28.7945011274715,11.403886494285,10.5329036844897,13.0125655851384,13.0826340752352,19.5168832121575,22.7293046289393,17.9879271380458,28.7514879693553,43.3728364439451,18.4545366734569,23.8579114473985,17.8243653755173,23.0467316309399,18.6666988257664,23.2467812333652,7.83962871687693,8.71755268055246,6.31655160526522,6.8921919385452,10.5580904016086,9.12112413390595,7.05684363327806,5.76499327703792,9.52546010189447,2.46025915033828,0,11.8429164098023,6.64938581433969,9.18762103180661,15.9042019680025,15.626706890476,16.7527598071615,17.0587131528994,20.4913645487534,14.0798002379035,33.4885535815036,33.4543873024398,29.367480345869,4.69434806608824,3.70642765846759,3.07560655828261,6.02732687130279,2.51975558925653,4.31257693094915,14.7648693330808,16.6833292662609,14.7881271622684,13.3774906738692,17.1920063963254,10.8291139378263,9.71119012126069,11.1088105647127,7.60597684207415,7.45457970552091,4.4464739805557,3.5995988691256,1.97773272513395,3.5524005747305,3.29560121570245,1.53687322128622,18.8715094401429,12.0155285115205,13.4607975264884,16.5677570954206,14.1355866209033,13.5964787128599,10.543001812006,11.0306254393203,39.6417171597799,43.7967569632194,44.2386815777981,11.0784481693363,11.5274430939036,13.5437476344758,20.1011759280994,38.8306200921859,38.5051584397561,31.2306300602088,30.1827963294098,23.8591290656385,12.4190957066422,14.1318817399689,23.4790235848359,12.0459342777394,7.47968467078526,12.4131734076698,14.2950811838487,13.8888335000174,19.5217743983135,13.4639954836666,12.7295142255406,10.2468476607999,27.4644668564527,30.7983545794363,15.2883143823987,35.5533351576666,7.79367747640371,7.85415582972806,8.59391556525132,16.3282947998256,24.081223179187,19.8912466346865,15.4401940821861,9.13396434936424,13.1450833435953,17.9359942257621,25.1639833270408,18.0959891514733,27.4386414185155,18.5087176857487,15.0383793831479,21.1914573431106,19.8757366614354,18.9101348722737,3.72783522436244,45.0882427397783,53.8278036510579,7.40825460104915,14.0183695671927,7.7987355029143,16.2649890653523,44.1882386244227,51.6975681185048,47.1203820423242,55.7976067817207,61.88314067394,49.0379785160562,52.0794454447502,27.5984676034357,23.1396965334773,24.0086620511991,16.8353484709179,21.2096322029207,23.4500146522142,20.7071449276152,26.6747527569216,36.0593445502038,31.7722026306427,31.6711829011883,38.2880988693743,9.7005596819779,19.0997140969497,19.7065259063623,16.6588756644957,15.5706459566335,20.89512999133,23.0475992776897,20.6995637491233,7.72434506044558,5.66165395652373,8.52490498186778,13.0489236697366,19.465662978431,18.1862682075625,13.2577051927718,15.9379027715397,15.8895126274,20.6955210827863,14.7550370769791,29.7751623036282,18.7598228901368,21.3417703302824,25.2123997687611,27.4855976359625,22.8332119902693,26.707077333314,57.6194459065709,46.307075570678,7.59963200862735,6.08236303326152,20.049095550312,17.8822237332538,16.62390251055,12.1010114774006,10.8965241483986,11.6037631928661,6.16887780007865,8.23494773620054,12.3154252312132,16.5133871794155,14.0374142725766,9.88701349519644,9.07779809473716,11.1519113022446,5.50036912763937,17.5942709418982,21.4144697778853,16.9030602111611,20.752916126936,25.6697100798566,20.8048207138806,19.3369293853279,21.0378295307442,26.0368015874999,13.6368208460088,11.1786220829783,19.4593405162071,15.2906236421701,18.8659912891308,21.7059443777175,19.8608164389507,16.686375972147,26.2659067375557,12.0807021802756,27.3159592401974,17.4906245404197,10.9213185590096,13.8918382870911,18.6573310062789,23.639732546805,19.7685913478267,19.5176154123599,16.2964976442026,16.4652733201932,18.0711491182147,21.775813467436,13.0924002487308,23.8063050386515,23.3300013277163,18.8244986201459,18.4967531642685,18.8442811923099,20.3768278601757,22.5652531387158,9.04747703635634,11.4220193601929,11.3105782794378,15.452457793065,39.8165463169724,46.0641928307358,11.639381121744,34.3360460997947,19.8770178232242,16.0079885161622,21.5423397732799,17.2057534525837,17.1554979043443,16.4184387857523,20.2405350837447,19.2888866221466,22.5314033429518,40.1651645527259,18.8780313326997,9.79360820169904,30.1340874804116,18.476653772924,7.96470830039777,15.7807413500738,14.8138542912728,15.0884063804718,3.54362271456927,11.0676653259814,22.7416897988035,21.4484900391728,19.6073558111597,14.5376908650475,18.9753495434998,16.5016869197099,41.8740715077159,19.8067203434441,7.63216234318252,19.9333442579381,24.8276327099183,24.0797903762795,26.1632942757372,15.22324745573,12.6722722354404,18.0057260234247,15.6575162619023,16.818397800031,34.7148517396197,17.6113740790215,19.8158091045207,20.1893306686425,7.28702091574627,38.939313422207,15.2075083910089,14.859854493352,17.2230910453832,28.8203739217177,19.6839687918276,21.7339264546196,15.4680371294408,15.8145141125734,25.0141952586007,5.72802370809068,17.556647643753,15.0456405673868,15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| |phase1_expression=32.9906625035876,8.72438519098403,8.64498554840118,6.95667686005709,9.5170188689806,9.73699777088961,9.34450562382103,28.7945011274715,11.403886494285,10.5329036844897,13.0125655851384,13.0826340752352,19.5168832121575,22.7293046289393,17.9879271380458,28.7514879693553,43.3728364439451,18.4545366734569,23.8579114473985,17.8243653755173,23.0467316309399,18.6666988257664,23.2467812333652,7.83962871687693,8.71755268055246,6.31655160526522,6.8921919385452,10.5580904016086,9.12112413390595,7.05684363327806,5.76499327703792,9.52546010189447,2.46025915033828,0,11.8429164098023,6.64938581433969,9.18762103180661,15.9042019680025,15.626706890476,16.7527598071615,17.0587131528994,20.4913645487534,14.0798002379035,33.4885535815036,33.4543873024398,29.367480345869,4.69434806608824,3.70642765846759,3.07560655828261,6.02732687130279,2.51975558925653,4.31257693094915,14.7648693330808,16.6833292662609,14.7881271622684,13.3774906738692,17.1920063963254,10.8291139378263,9.71119012126069,11.1088105647127,7.60597684207415,7.45457970552091,4.4464739805557,3.5995988691256,1.97773272513395,3.5524005747305,3.29560121570245,1.53687322128622,18.8715094401429,12.0155285115205,13.4607975264884,16.5677570954206,14.1355866209033,13.5964787128599,10.543001812006,11.0306254393203,39.6417171597799,43.7967569632194,44.2386815777981,11.0784481693363,11.5274430939036,13.5437476344758,20.1011759280994,38.8306200921859,38.5051584397561,31.2306300602088,30.1827963294098,23.8591290656385,12.4190957066422,14.1318817399689,23.4790235848359,12.0459342777394,7.47968467078526,12.4131734076698,14.2950811838487,13.8888335000174,19.5217743983135,13.4639954836666,12.7295142255406,10.2468476607999,27.4644668564527,30.7983545794363,15.2883143823987,35.5533351576666,7.79367747640371,7.85415582972806,8.59391556525132,16.3282947998256,24.081223179187,19.8912466346865,15.4401940821861,9.13396434936424,13.1450833435953,17.9359942257621,25.1639833270408,18.0959891514733,27.4386414185155,18.5087176857487,15.0383793831479,21.1914573431106,19.8757366614354,18.9101348722737,3.72783522436244,45.0882427397783,53.8278036510579,7.40825460104915,14.0183695671927,7.7987355029143,16.2649890653523,44.1882386244227,51.6975681185048,47.1203820423242,55.7976067817207,61.88314067394,49.0379785160562,52.0794454447502,27.5984676034357,23.1396965334773,24.0086620511991,16.8353484709179,21.2096322029207,23.4500146522142,20.7071449276152,26.6747527569216,36.0593445502038,31.7722026306427,31.6711829011883,38.2880988693743,9.7005596819779,19.0997140969497,19.7065259063623,16.6588756644957,15.5706459566335,20.89512999133,23.0475992776897,20.6995637491233,7.72434506044558,5.66165395652373,8.52490498186778,13.0489236697366,19.465662978431,18.1862682075625,13.2577051927718,15.9379027715397,15.8895126274,20.6955210827863,14.7550370769791,29.7751623036282,18.7598228901368,21.3417703302824,25.2123997687611,27.4855976359625,22.8332119902693,26.707077333314,57.6194459065709,46.307075570678,7.59963200862735,6.08236303326152,20.049095550312,17.8822237332538,16.62390251055,12.1010114774006,10.8965241483986,11.6037631928661,6.16887780007865,8.23494773620054,12.3154252312132,16.5133871794155,14.0374142725766,9.88701349519644,9.07779809473716,11.1519113022446,5.50036912763937,17.5942709418982,21.4144697778853,16.9030602111611,20.752916126936,25.6697100798566,20.8048207138806,19.3369293853279,21.0378295307442,26.0368015874999,13.6368208460088,11.1786220829783,19.4593405162071,15.2906236421701,18.8659912891308,21.7059443777175,19.8608164389507,16.686375972147,26.2659067375557,12.0807021802756,27.3159592401974,17.4906245404197,10.9213185590096,13.8918382870911,18.6573310062789,23.639732546805,19.7685913478267,19.5176154123599,16.2964976442026,16.4652733201932,18.0711491182147,21.775813467436,13.0924002487308,23.8063050386515,23.3300013277163,18.8244986201459,18.4967531642685,18.8442811923099,20.3768278601757,22.5652531387158,9.04747703635634,11.4220193601929,11.3105782794378,15.452457793065,39.8165463169724,46.0641928307358,11.639381121744,34.3360460997947,19.8770178232242,16.0079885161622,21.5423397732799,17.2057534525837,17.1554979043443,16.4184387857523,20.2405350837447,19.2888866221466,22.5314033429518,40.1651645527259,18.8780313326997,9.79360820169904,30.1340874804116,18.476653772924,7.96470830039777,15.7807413500738,14.8138542912728,15.0884063804718,3.54362271456927,11.0676653259814,22.7416897988035,21.4484900391728,19.6073558111597,14.5376908650475,18.9753495434998,16.5016869197099,41.8740715077159,19.8067203434441,7.63216234318252,19.9333442579381,24.8276327099183,24.0797903762795,26.1632942757372,15.22324745573,12.6722722354404,18.0057260234247,15.6575162619023,16.818397800031,34.7148517396197,17.6113740790215,19.8158091045207,20.1893306686425,7.28702091574627,38.939313422207,15.2075083910089,14.859854493352,17.2230910453832,28.8203739217177,19.6839687918276,21.7339264546196,15.4680371294408,15.8145141125734,25.0141952586007,5.72802370809068,17.556647643753,15.0456405673868,15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| ||
|short_description=p1@Trim23 | |short_description=p1@Trim23 | ||
}} | }} |
Latest revision as of 01:46, 27 September 2015
Short description: | p1@Trim23 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trim23_5end |
Coexpression cluster: | MCL_coexpression_mm9:813 |
Association with transcript: | 0bp_to_ENSMUST00000069187, ENSMUST00000160230, uc007rsx.1, uc011zeg.1_5end |
EntrezGene: | Trim23 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 3.69e-09 | 73 |
neurectoderm | 6.21e-09 | 64 |
neural plate | 6.21e-09 | 64 |
presumptive neural plate | 6.21e-09 | 64 |
structure with developmental contribution from neural crest | 2.20e-08 | 92 |
occipital lobe | 5.24e-08 | 10 |
visual cortex | 5.24e-08 | 10 |
neocortex | 5.24e-08 | 10 |
pre-chordal neural plate | 1.12e-07 | 49 |
regional part of nervous system | 1.30e-07 | 54 |
ectoderm-derived structure | 6.15e-07 | 95 |
ectoderm | 6.15e-07 | 95 |
presumptive ectoderm | 6.15e-07 | 95 |
neural tube | 8.58e-07 | 52 |
neural rod | 8.58e-07 | 52 |
future spinal cord | 8.58e-07 | 52 |
neural keel | 8.58e-07 | 52 |