FFCP PHASE1:Mm9::chr11:119089775..119089818,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=207592 | |EntrezGene=207592 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1555 | |||
|TSSclassifier=NA | |||
|UniProt=A2ABG4,Q8BXD8,Q6PFC0 | |UniProt=A2ABG4,Q8BXD8,Q6PFC0 | ||
|association_with_transcript=0bp_to_ENSMUST00000036113,NM_172443,uc007mqa.2,uc007mqb.2_5end | |association_with_transcript=0bp_to_ENSMUST00000036113,NM_172443,uc007mqa.2,uc007mqb.2_5end | ||
|cluster_id=chr11:119089775..119089818,- | |||
|description=CAGE_peak_1_at_Tbc1d16_5end | |description=CAGE_peak_1_at_Tbc1d16_5end | ||
|id=chr11:119089775..119089818,- | |id=chr11:119089775..119089818,- | ||
|ontology_enrichment_celltype=CL:0000117!5.60e-11!23;CL:0000337!5.60e-11!23;CL:0000540!2.76e-08!33;CL:0000047!2.76e-08!33;CL:0000031!2.76e-08!33;CL:0000404!2.76e-08!33 | |ontology_enrichment_celltype=CL:0000117!5.60e-11!23;CL:0000337!5.60e-11!23;CL:0000540!2.76e-08!33;CL:0000047!2.76e-08!33;CL:0000031!2.76e-08!33;CL:0000404!2.76e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.52e-11,23;CL:0000337,5.52e-11,23;CL:0000540,2.73e-08,33;CL:0000047,2.73e-08,33;CL:0000031,2.73e-08,33;CL:0000404,2.73e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.33e-10!333;UBERON:0000922!1.10e-09!328;UBERON:0001017!1.69e-09!73;UBERON:0005743!1.69e-09!73;UBERON:0002346!3.15e-09!71;UBERON:0003075!3.15e-09!71;UBERON:0007284!3.15e-09!71;UBERON:0001049!6.52e-09!52;UBERON:0005068!6.52e-09!52;UBERON:0006241!6.52e-09!52;UBERON:0007135!6.52e-09!52;UBERON:0003056!1.04e-08!49;UBERON:0000073!1.46e-08!75;UBERON:0001016!1.46e-08!75;UBERON:0000033!1.65e-08!63;UBERON:0000025!1.06e-07!114;UBERON:0004111!1.36e-07!122;UBERON:0004121!2.54e-07!102;UBERON:0000924!2.54e-07!102;UBERON:0006601!2.54e-07!102;UBERON:0002616!7.09e-07!49;UBERON:0002780!9.45e-07!39;UBERON:0001890!9.45e-07!39;UBERON:0006240!9.45e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.69e-12,92;UBERON:0002346,2.35e-10,64;UBERON:0003075,2.35e-10,64;UBERON:0007284,2.35e-10,64;UBERON:0001017,1.67e-09,73;UBERON:0000073,3.34e-09,54;UBERON:0001049,6.45e-09,52;UBERON:0005068,6.45e-09,52;UBERON:0006241,6.45e-09,52;UBERON:0007135,6.45e-09,52;UBERON:0003056,1.03e-08,49;UBERON:0001016,1.45e-08,75;UBERON:0010371,2.55e-08,73;UBERON:0004121,5.93e-08,95;UBERON:0000924,5.93e-08,95;UBERON:0006601,5.93e-08,95;UBERON:0000025,1.05e-07,114;UBERON:0004111,1.35e-07,122;UBERON:0002616,8.65e-07,46;UBERON:0002780,9.38e-07,39;UBERON:0001890,9.38e-07,39;UBERON:0006240,9.38e-07,39 | |||
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|phase1_expression=35.2327463630547,1.04692622291808,2.72999543633722,0,0.500895729946347,8.72972213941827,5.84031601488814,0.387369970324729,0.140788722151667,0.468129052643987,0,0.239316476986009,0,0.0874204024189974,0.666219523631325,0.202475267389826,0.699561878128147,0.630924330716475,0.548457734422955,1.27316895539409,10.8855411393369,11.5177503393027,11.2315909329742,1.91990907352088,2.52350209173887,1.72269589234506,2.58457197695445,2.80112602491656,2.09025761402011,4.03248207615889,3.32595765982957,0.635030673459631,0,0,2.02196133825892,0.664938581433969,2.6542016314108,0,0.7813353445238,0.523523743973798,0,0,0,10.5753327099485,10.644577778049,11.5634453861859,17.2126095756569,9.15705656797875,8.34807494390993,8.55491555926847,16.2384249085421,18.6878333674463,0,0,0,5.91696702882678,7.44986943840768,8.76642556871652,86.3891287870483,68.7688273053643,79.2289254382724,23.3802727127701,12.450127145556,13.9484456178617,13.8441290759376,18.4724829885986,28.7616106097669,21.9004434033286,62.4211466097035,78.0334323557172,72.9827615889296,45.9898084890124,47.0449992226937,72.7595347336827,63.1621654010178,85.4873471547319,22.0231761998777,18.0039146700115,19.5080297235429,101.156782689059,88.5600390071325,75.5324387307302,20.1011759280994,22.5105044012672,16.6550090076723,68.9430890008382,52.535150214869,91.5221279002226,2.95332153999418,3.40072020480535,8.69593466105033,6.88339101585109,5.439770669662,9.71465744948071,8.4470934268197,12.9927797258227,9.12888730856387,0.511290967734173,1.03914401841148,1.06001872353102,19.4363919291819,0,0,0,3.68034769719064,4.30711771307668,1.51657333504435,10.0481814152773,3.10725460376606,7.12522267511159,23.0735484598961,16.7456013071678,15.681853813412,13.1128697280782,12.6995803706561,5.78066320116507,7.66304399976559,6.36237170447611,4.42305275974937,10.676612096529,5.07935492458905,4.84875253135222,5.59175283654366,30.1564220921894,50.8955497556696,7.15279754584056,2.51611761462433,4.19931911695385,2.41433431438823,15.1288545798871,34.312545211397,97.0051598311313,13.3844726548053,14.3200656104985,19.7398642331582,23.8494656709604,31.2646847020471,7.0911973247753,5.05445516867349,21.6755111563068,33.831315170303,37.7039451270896,26.1090088217756,26.2226383034144,27.5547821562878,25.3665166164003,32.4207966976662,16.298312356558,33.1974709116577,29.6896545863476,24.9850596312807,25.6459006940263,25.8583941779806,19.8503734917635,16.2567887762275,24.2821805518562,1.40442637462647,0.772043721344145,0.284163499395593,13.0489236697366,18.0585066185444,17.6460820231795,21.3070262026689,29.1211062986158,30.3906212388135,32.7872862098075,34.6072687805509,28.3739781952222,30.4435722339939,26.7592966448925,31.0493540560627,39.4739966048397,29.2001653337097,38.248829346706,15.1408762966172,84.8963052129097,1.65209391491899,3.96675849995316,24.5281488115519,26.2427439202296,24.2270827285535,22.386871233191,18.902133726814,20.9248188723815,9.49058123089023,17.7874871101932,17.0907941984183,12.3353012665514,13.2575579241002,11.6846523125049,6.05186539649144,8.76221602319216,18.587454293402,23.8779391354333,20.2873924211545,19.1432248174595,20.752916126936,20.4095235880827,16.5679727265554,10.4803205065518,11.303908404579,14.4374681788507,14.5261787272703,4.67166296005063,5.30709286805648,5.8464149220062,3.44862206360455,7.71766911207734,12.4766667372896,10.9324532231308,11.3494658742525,7.4131581560782,12.9391385874619,16.0020607497456,13.4176199439261,12.1237861414614,9.50806291666135,10.1313139486307,11.0851914099963,28.2342203538022,23.4669566076517,30.7238605253091,34.4994664984098,32.4962139437123,27.6130623427776,24.9771069257982,25.6945284893091,22.589398344175,27.9045845150602,19.1720078217413,13.6421135674058,20.6848153771562,7.53956419696361,0.54390568381871,1.47529281905711,4.41498794087572,14.9312048688647,13.5965556446956,6.72133276044369,18.4303776859192,9.4652465824877,10.1514073517126,14.2179442503647,9.79772071605463,14.9275111635204,13.3045969470751,11.7395103485719,16.9508397588561,18.9738133414331,8.9969968598106,8.94222536812092,31.1614806417697,33.5547136268367,22.7658769702099,50.4431525691859,31.3187020639926,32.9532677091579,37.3438057916678,43.1140763605928,39.6591340847666,24.2922595578128,36.7169066772281,31.7282666762402,30.3395287618383,28.4630243152497,37.1287955693473,34.3844001811326,35.8321577122307,34.2800512024299,35.1512737451811,37.7734697658043,45.3056796709259,36.8589806148751,52.0635062985965,7.04015124191131,11.8625959683739,16.0985730580122,7.4198813823666,14.8547272560233,9.83100676328941,7.75920236020387,6.56563598980245,11.3677526285642,12.0526446306831,2.9048049735635,26.2111322313293,12.9636169158798,2.26042148405629,1.36694227721025,1.83022538565218,5.77926661979108,5.17820373597535,5.52799895217695,6.68269432610579,27.3630634447682,26.4315307264903,27.3253512279157,25.5087721137652,19.652630737156,15.9139928734088,17.1919187908699,9.94672579539312,9.98035294346805,14.2908042009993,0.56369293868419,15.9982704267057,22.83327168307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| ||
|short_description=p1@Tbc1d16 | |short_description=p1@Tbc1d16 | ||
}} | }} |
Latest revision as of 02:07, 27 September 2015
Short description: | p1@Tbc1d16 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tbc1d16_5end |
Coexpression cluster: | MCL_coexpression_mm9:1555 |
Association with transcript: | 0bp_to_ENSMUST00000036113, NM_172443, uc007mqa.2, uc007mqb.2_5end |
EntrezGene: | Tbc1d16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.52e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.52e-11 | 23 |
neuron | 2.73e-08 | 33 |
neuronal stem cell | 2.73e-08 | 33 |
neuroblast | 2.73e-08 | 33 |
electrically signaling cell | 2.73e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 4.69e-12 | 92 |
neurectoderm | 2.35e-10 | 64 |
neural plate | 2.35e-10 | 64 |
presumptive neural plate | 2.35e-10 | 64 |
central nervous system | 1.67e-09 | 73 |
regional part of nervous system | 3.34e-09 | 54 |
neural tube | 6.45e-09 | 52 |
neural rod | 6.45e-09 | 52 |
future spinal cord | 6.45e-09 | 52 |
neural keel | 6.45e-09 | 52 |
pre-chordal neural plate | 1.03e-08 | 49 |
nervous system | 1.45e-08 | 75 |
ecto-epithelium | 2.55e-08 | 73 |
ectoderm-derived structure | 5.93e-08 | 95 |
ectoderm | 5.93e-08 | 95 |
presumptive ectoderm | 5.93e-08 | 95 |
tube | 1.05e-07 | 114 |
anatomical conduit | 1.35e-07 | 122 |
regional part of brain | 8.65e-07 | 46 |
regional part of forebrain | 9.38e-07 | 39 |
forebrain | 9.38e-07 | 39 |
future forebrain | 9.38e-07 | 39 |