FFCP PHASE1:Mm9::chr1:3661851..3661889,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:3661851..3661889,- to FFCP PHASE1:Mm9::chr1:3661851..3661889,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=497097 | |EntrezGene=497097 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q5GH67 | |UniProt=Q5GH67 | ||
|association_with_transcript=-272bp_to_ENSMUST00000070533,NM_001011874,uc007aeu.1_5end | |||
|cluster_id=chr1:3661851..3661889,- | |||
|description=CAGE_peak_2_at_Xkr4_5end | |||
|id=chr1:3661851..3661889,- | |||
|ontology_enrichment_celltype=CL:0000540!8.50e-15!33;CL:0000047!8.50e-15!33;CL:0000031!8.50e-15!33;CL:0000404!8.50e-15!33;CL:0000117!2.67e-13!23;CL:0000337!2.67e-13!23;CL:0000393!3.94e-12!39;CL:0000211!3.94e-12!39;CL:0000221!5.27e-12!44;CL:0000133!5.27e-12!44;CL:0002319!9.21e-12!43;CL:0000055!2.20e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.88e-19,33;CL:0000047,6.88e-19,33;CL:0000031,6.88e-19,33;CL:0000404,6.88e-19,33;CL:0000117,6.71e-18,23;CL:0000337,6.71e-18,23;CL:0000393,1.87e-15,39;CL:0000211,1.87e-15,39;CL:0000221,4.76e-14,44;CL:0000133,4.76e-14,44;CL:0002319,1.02e-13,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.22e-27!75;UBERON:0001016!2.22e-27!75;UBERON:0001017!5.75e-27!73;UBERON:0005743!5.75e-27!73;UBERON:0004121!3.83e-26!102;UBERON:0000924!3.83e-26!102;UBERON:0006601!3.83e-26!102;UBERON:0002346!7.93e-23!71;UBERON:0003075!7.93e-23!71;UBERON:0007284!7.93e-23!71;UBERON:0001049!5.02e-22!52;UBERON:0005068!5.02e-22!52;UBERON:0006241!5.02e-22!52;UBERON:0007135!5.02e-22!52;UBERON:0000033!7.21e-22!63;UBERON:0000955!3.90e-21!50;UBERON:0006238!3.90e-21!50;UBERON:0002616!1.82e-20!49;UBERON:0003056!2.20e-19!49;UBERON:0002020!3.10e-18!34;UBERON:0003080!4.21e-18!40;UBERON:0002780!1.57e-17!39;UBERON:0001890!1.57e-17!39;UBERON:0006240!1.57e-17!39;UBERON:0002791!5.33e-15!29;UBERON:0003528!5.33e-15!29;UBERON:0001893!5.33e-15!29;UBERON:0000956!2.13e-10!21;UBERON:0001869!2.13e-10!21;UBERON:0000203!2.13e-10!21;UBERON:0007811!1.24e-09!86;UBERON:0002619!4.30e-09!17;UBERON:0000153!9.14e-08!94;UBERON:0000468!1.55e-07!333;UBERON:0002021!4.37e-07!10;UBERON:0000411!4.37e-07!10;UBERON:0001950!4.37e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.95e-33,73;UBERON:0001016,3.27e-33,75;UBERON:0000073,2.32e-29,54;UBERON:0004121,2.44e-29,95;UBERON:0000924,2.44e-29,95;UBERON:0006601,2.44e-29,95;UBERON:0002346,2.61e-27,64;UBERON:0003075,2.61e-27,64;UBERON:0007284,2.61e-27,64;UBERON:0001049,6.71e-27,52;UBERON:0005068,6.71e-27,52;UBERON:0006241,6.71e-27,52;UBERON:0007135,6.71e-27,52;UBERON:0002020,2.54e-23,34;UBERON:0000955,5.70e-23,47;UBERON:0006238,5.70e-23,47;UBERON:0003056,7.28e-23,49;UBERON:0010371,2.13e-22,73;UBERON:0002616,4.31e-22,46;UBERON:0003080,1.83e-21,40;UBERON:0002780,1.09e-20,39;UBERON:0001890,1.09e-20,39;UBERON:0006240,1.09e-20,39;UBERON:0003528,7.29e-19,29;UBERON:0002791,7.29e-19,29;UBERON:0001893,7.29e-19,29;UBERON:0010314,1.02e-16,92;UBERON:0000956,1.52e-12,21;UBERON:0001869,1.52e-12,21;UBERON:0000203,1.52e-12,21;UBERON:0002619,1.05e-10,17;UBERON:0002021,2.94e-09,10;UBERON:0000411,2.94e-09,10;UBERON:0001950,2.94e-09,10;UBERON:0002420,1.21e-07,8;UBERON:0007245,1.21e-07,8;UBERON:0010009,1.21e-07,8;UBERON:0010011,1.21e-07,8;UBERON:0000454,1.21e-07,8 | |||
|phase1_expression=0.640595388419176,0,0.454999239389536,0,0,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0.47997726838022,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.58328969722285,0.279972843250725,0,0,0,0,0.514518872071894,3.15186783932632,0.515672092277442,5.05791152148994,5.28990979272033,3.80298842103708,0.338844532069132,0.889294796111139,0,0,0,1.79760066311043,0,1.97010263386108,1.35005938331691,2.94454945891935,3.42781181284564,3.97563373712904,3.91970557487853,3.06705507258356,3.67687514644008,5.50579404996943,5.87361755191863,6.60508093001847,5.53922408466814,6.12967212136145,5.73004707612436,1.67509799400829,6.75315132038016,5.50073691996516,11.490514833473,7.97281412474976,10.2519695203915,0.681535739998656,2.04043212288321,0,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0.253359865475099,0.505524445014783,0.34255163915718,0,0.29688427812965,0.867426633830679,0.608930956624282,1.38369298353635,1.50722640552623,1.64624189989987,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0,1.45462575940567,0,3.22058876712702,4.39838084308256,0.255457055208591,0,0,0,4.34392854273986,5.03250663100489,9.04711335212624,4.86708096538374,8.18289463457058,6.64921742590592,8.27430441645564,2.13862664085664,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,1.83921683546778,1.98068342785884,1.50704817835715,2.72145996605311,2.8185018462667,2.24884138943349,1.55222022443409,0,0.189106080167819,0,0.43839146485515,0.834141747676794,0,0.205782136407943,2.7864797354589,0,0,0,0.207125772535502,0,0,0.710234206755631,0.393528463494808,0.462801338662135,0.465067889500816,0,0.350296027101508,0.16455984991348,0.820837320395476,0.0810688095458557,0.146199987425332,0,0.134206418760372,6.72927835405207,5.9684675179985,0,0,0.213288250535234,0.464473343720877,0.902072229254653,1.21010114774006,1.11189021922435,0.570676878337677,0.474529061544512,0,0,0.795825888164603,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0,0.581857461502877,0,0.442655759869801,0.295220295959204,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.757965647081939,0.488894929326078,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.797273843287435,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0,1.44495530989013,3.28192722458169,0,0.252470927204373,0.631016438832513,0,1.50796378412959,2.15071918157297,5.34716817797746,6.22768367735431,1.61924280669958,4.67609372658099,3.95287777946523,5.78378369559253,0.141940085208269,1.95872164033981,1.30309567482861,0.494910368917606,0,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0.614870295887855,1.03371317267288,0,0,0.316036757935816,0,1.03135543248187,3.40439605753788,0.36012218806262,0.388076051348264,2.57204442037911,1.95074257006501,2.49716344642899,3.1264313914403,0.608929898229199,0,0.21183207086382,0.220528398054962,0.32977250588296,0.484393280087717,0.482503399425247,0.477489376012546,0.328281799490123,0,1.66882771809459,0,0.82554747185289,0.185194527369712,0.376736914009382,0,0,0,0,0,0,0.790839983952838,1.01659733563424,0.432021363287205,0.418176592028937,0.655087691238533,0.404593039154462,0.661227645802687,0.26175594198403,0.259229946583586,0,0.56369293868419,0.747582730219894,1.48912641411388,2.72231663681667,2.58319646955462,0.675824501963113,0.938857909166032,1.5624526181274,0.734015410979976,0,0,0,0.608175645870493,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0,0.302899349844443,0.15241361331,0,0.0974578807397524,0,0,0.680191150845634,0.443971906748129,0.269141569828427,0.167884616364078,0,0.187682475451182,0.183151624267265,0.643105137237198,0.501572104035363,12.4245405375755,3.68260189205742,10.3121192419091,4.46818274093588,3.42541259885321,6.7985450765073,4.05013500139084,5.40385443869065,3.62513927187364,4.14208249401456,0.31136204275253,1.59609949360412,1.02440163452481,1.94485373654635,0.838452650511929,3.12533964365024,1.77797382241292,1.03017528619447,2.56735367673452,2.02157769411038,1.77435509923168,1.32038438970253,1.87283014939765,1.98477972455095,2.12511235135769,1.90517476513229,1.50649623728312,2.89363830695558,2.06042950401653,1.61918812147837,2.40008476669791,2.66213709239006,0.715308569841963,1.30811774969096,2.4468438907986,1.86152137361688,2.19513567447327,2.36762740294059,2.03706170768793,3.36685362994643,1.89816028998679,2.06859412988683,1.22769312950907,1.70430525304563,1.92906610981141,1.24905288968973,1.63752125911786,1.28922632428979,0.956441660344217,0.882365676478062,0.231867835620421 | |phase1_expression=0.640595388419176,0,0.454999239389536,0,0,1.34303417529512,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0.47997726838022,0,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.439372365468944,0.58328969722285,0.279972843250725,0,0,0,0,0.514518872071894,3.15186783932632,0.515672092277442,5.05791152148994,5.28990979272033,3.80298842103708,0.338844532069132,0.889294796111139,0,0,0,1.79760066311043,0,1.97010263386108,1.35005938331691,2.94454945891935,3.42781181284564,3.97563373712904,3.91970557487853,3.06705507258356,3.67687514644008,5.50579404996943,5.87361755191863,6.60508093001847,5.53922408466814,6.12967212136145,5.73004707612436,1.67509799400829,6.75315132038016,5.50073691996516,11.490514833473,7.97281412474976,10.2519695203915,0.681535739998656,2.04043212288321,0,0,0,0,0,0,0.280888840263504,0,0,0,1.69012103732017,0,0,0,0,0.253359865475099,0.505524445014783,0.34255163915718,0,0.29688427812965,0.867426633830679,0.608930956624282,1.38369298353635,1.50722640552623,1.64624189989987,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0,1.45462575940567,0,3.22058876712702,4.39838084308256,0.255457055208591,0,0,0,4.34392854273986,5.03250663100489,9.04711335212624,4.86708096538374,8.18289463457058,6.64921742590592,8.27430441645564,2.13862664085664,0.124406970610093,0.252722758433675,0.210441855886474,0.260240885925407,1.83921683546778,1.98068342785884,1.50704817835715,2.72145996605311,2.8185018462667,2.24884138943349,1.55222022443409,0,0.189106080167819,0,0.43839146485515,0.834141747676794,0,0.205782136407943,2.7864797354589,0,0,0,0.207125772535502,0,0,0.710234206755631,0.393528463494808,0.462801338662135,0.465067889500816,0,0.350296027101508,0.16455984991348,0.820837320395476,0.0810688095458557,0.146199987425332,0,0.134206418760372,6.72927835405207,5.9684675179985,0,0,0.213288250535234,0.464473343720877,0.902072229254653,1.21010114774006,1.11189021922435,0.570676878337677,0.474529061544512,0,0,0.795825888164603,0,0.898819408654221,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0,0.581857461502877,0,0.442655759869801,0.295220295959204,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.757965647081939,0.488894929326078,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0.797273843287435,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0,1.44495530989013,3.28192722458169,0,0.252470927204373,0.631016438832513,0,1.50796378412959,2.15071918157297,5.34716817797746,6.22768367735431,1.61924280669958,4.67609372658099,3.95287777946523,5.78378369559253,0.141940085208269,1.95872164033981,1.30309567482861,0.494910368917606,0,0.242780636154981,0.604647113929502,0.188605079755898,0.590603785761546,0.614870295887855,1.03371317267288,0,0,0.316036757935816,0,1.03135543248187,3.40439605753788,0.36012218806262,0.388076051348264,2.57204442037911,1.95074257006501,2.49716344642899,3.1264313914403,0.608929898229199,0,0.21183207086382,0.220528398054962,0.32977250588296,0.484393280087717,0.482503399425247,0.477489376012546,0.328281799490123,0,1.66882771809459,0,0.82554747185289,0.185194527369712,0.376736914009382,0,0,0,0,0,0,0.790839983952838,1.01659733563424,0.432021363287205,0.418176592028937,0.655087691238533,0.404593039154462,0.661227645802687,0.26175594198403,0.259229946583586,0,0.56369293868419,0.747582730219894,1.48912641411388,2.72231663681667,2.58319646955462,0.675824501963113,0.938857909166032,1.5624526181274,0.734015410979976,0,0,0,0.608175645870493,0.205421914329655,0.25984164595559,0.179026695667481,0,0,0,0.302899349844443,0.15241361331,0,0.0974578807397524,0,0,0.680191150845634,0.443971906748129,0.269141569828427,0.167884616364078,0,0.187682475451182,0.183151624267265,0.643105137237198,0.501572104035363,12.4245405375755,3.68260189205742,10.3121192419091,4.46818274093588,3.42541259885321,6.7985450765073,4.05013500139084,5.40385443869065,3.62513927187364,4.14208249401456,0.31136204275253,1.59609949360412,1.02440163452481,1.94485373654635,0.838452650511929,3.12533964365024,1.77797382241292,1.03017528619447,2.56735367673452,2.02157769411038,1.77435509923168,1.32038438970253,1.87283014939765,1.98477972455095,2.12511235135769,1.90517476513229,1.50649623728312,2.89363830695558,2.06042950401653,1.61918812147837,2.40008476669791,2.66213709239006,0.715308569841963,1.30811774969096,2.4468438907986,1.86152137361688,2.19513567447327,2.36762740294059,2.03706170768793,3.36685362994643,1.89816028998679,2.06859412988683,1.22769312950907,1.70430525304563,1.92906610981141,1.24905288968973,1.63752125911786,1.28922632428979,0.956441660344217,0.882365676478062,0.231867835620421 | ||
|short_description=p2@Xkr4 | |||
}} | }} |
Latest revision as of 02:22, 27 September 2015
Short description: | p2@Xkr4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Xkr4_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -272bp_to_ENSMUST00000070533, NM_001011874, uc007aeu.1_5end |
EntrezGene: | Xkr4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.88e-19 | 33 |
neuronal stem cell | 6.88e-19 | 33 |
neuroblast | 6.88e-19 | 33 |
electrically signaling cell | 6.88e-19 | 33 |
CNS neuron (sensu Vertebrata) | 6.71e-18 | 23 |
neuroblast (sensu Vertebrata) | 6.71e-18 | 23 |
electrically responsive cell | 1.87e-15 | 39 |
electrically active cell | 1.87e-15 | 39 |
ectodermal cell | 4.76e-14 | 44 |
neurectodermal cell | 4.76e-14 | 44 |
neural cell | 1.02e-13 | 43 |