FFCP PHASE1:Mm9::chr1:4486453..4486470,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:4486453..4486470,-
|short_description=p3@Sox17
|description=CAGE_peak_3_at_Sox17_5end
|association_with_transcript=-9bp_to_ENSMUST00000116652_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20671 | |EntrezGene=20671 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=32 | |||
|TSSclassifier=NA | |||
|UniProt=Q61473 | |UniProt=Q61473 | ||
|association_with_transcript=-9bp_to_ENSMUST00000116652_5end | |||
|cluster_id=chr1:4486453..4486470,- | |||
|description=CAGE_peak_3_at_Sox17_5end | |||
|id=chr1:4486453..4486470,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!2.99e-10!14;UBERON:0000117!2.99e-10!14;UBERON:0000171!2.99e-10!14;UBERON:0000170!2.99e-10!14;UBERON:0005597!2.99e-10!14;UBERON:0000118!2.99e-10!14;UBERON:0000468!3.41e-08!333;UBERON:0005177!3.81e-08!85;UBERON:0005153!1.63e-07!17;UBERON:0009569!2.03e-07!66;UBERON:0000464!4.13e-07!57;UBERON:0005157!4.58e-07!27;UBERON:0005178!6.37e-07!17;UBERON:0005181!6.37e-07!17;UBERON:0002224!6.37e-07!17;UBERON:0000915!6.37e-07!17;UBERON:0008947!6.37e-07!17;UBERON:0003258!6.37e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.66e-16,14;UBERON:0000117,3.66e-16,14;UBERON:0000171,3.66e-16,14;UBERON:0000170,3.66e-16,14;UBERON:0005597,3.66e-16,14;UBERON:0000118,3.66e-16,14;UBERON:0005153,1.61e-12,17;UBERON:0005178,1.61e-12,17;UBERON:0005181,1.61e-12,17;UBERON:0002224,1.61e-12,17;UBERON:0000915,1.61e-12,17;UBERON:0008947,1.61e-12,17;UBERON:0003258,1.61e-12,17;UBERON:0005177,4.22e-12,79;UBERON:0009569,8.28e-12,66;UBERON:0005157,5.37e-10,20;UBERON:0002100,2.61e-09,90;UBERON:0006554,2.27e-08,18;UBERON:0001008,9.48e-08,19;UBERON:0002113,7.08e-07,14;UBERON:0003918,7.08e-07,14;UBERON:0011143,7.08e-07,14;UBERON:0005095,7.08e-07,14;UBERON:0007687,7.08e-07,14 | |||
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| ||
|short_description=p3@Sox17 | |||
}} | }} |
Latest revision as of 04:22, 27 September 2015
Short description: | p3@Sox17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sox17_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | -9bp_to_ENSMUST00000116652_5end |
EntrezGene: | Sox17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 3.66e-16 | 14 |
respiratory tube | 3.66e-16 | 14 |
respiration organ | 3.66e-16 | 14 |
pair of lungs | 3.66e-16 | 14 |
lung primordium | 3.66e-16 | 14 |
lung bud | 3.66e-16 | 14 |
epithelial bud | 1.61e-12 | 17 |
thoracic cavity element | 1.61e-12 | 17 |
thoracic segment organ | 1.61e-12 | 17 |
thoracic cavity | 1.61e-12 | 17 |
thoracic segment of trunk | 1.61e-12 | 17 |
respiratory primordium | 1.61e-12 | 17 |
endoderm of foregut | 1.61e-12 | 17 |
trunk region element | 4.22e-12 | 79 |
subdivision of trunk | 8.28e-12 | 66 |
epithelial fold | 5.37e-10 | 20 |
trunk | 2.61e-09 | 90 |
urinary system structure | 2.27e-08 | 18 |
renal system | 9.48e-08 | 19 |
kidney | 7.08e-07 | 14 |
kidney mesenchyme | 7.08e-07 | 14 |
upper urinary tract | 7.08e-07 | 14 |
kidney rudiment | 7.08e-07 | 14 |
kidney field | 7.08e-07 | 14 |