Personal tools

FFCP PHASE1:Mm9::chr4:82970039..82970109,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=69863
|EntrezGene=69863
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BYY4,B2RX73,Q8CCY2
|UniProt=Q8BYY4,B2RX73,Q8CCY2
|association_with_transcript=0bp_to_ENSMUST00000030205,NM_027238,uc008tkq.1,uc008tkr.1,uc008tks.1_5end
|association_with_transcript=0bp_to_ENSMUST00000030205,NM_027238,uc008tkq.1,uc008tkr.1,uc008tks.1_5end
|cluster_id=chr4:82970039..82970109,-
|description=CAGE_peak_1_at_Ttc39b_5end
|description=CAGE_peak_1_at_Ttc39b_5end
|id=chr4:82970039..82970109,-
|id=chr4:82970039..82970109,-
|ontology_enrichment_celltype=CL:0000066!4.61e-10!25;CL:0000223!3.48e-09!20;CL:0002076!9.24e-07!15
|ontology_enrichment_celltype=CL:0000066!4.61e-10!25;CL:0000223!3.48e-09!20;CL:0002076!9.24e-07!15
|ontology_enrichment_celltype_v019_2=CL:0000066,4.31e-10,25;CL:0000223,3.28e-09,20;CL:0002076,8.87e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.35e-09!130;UBERON:0000925!2.35e-09!130;UBERON:0006595!2.35e-09!130;UBERON:0001007!3.65e-09!128;UBERON:0001555!3.65e-09!128;UBERON:0007026!3.65e-09!128;UBERON:0004921!1.31e-08!126;UBERON:0004185!1.31e-08!126;UBERON:0007023!1.45e-07!51
|ontology_enrichment_uberon=UBERON:0004119!2.35e-09!130;UBERON:0000925!2.35e-09!130;UBERON:0006595!2.35e-09!130;UBERON:0001007!3.65e-09!128;UBERON:0001555!3.65e-09!128;UBERON:0007026!3.65e-09!128;UBERON:0004921!1.31e-08!126;UBERON:0004185!1.31e-08!126;UBERON:0007023!1.45e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.86e-09,118;UBERON:0000925,2.86e-09,118;UBERON:0006595,2.86e-09,118;UBERON:0001007,4.38e-09,116;UBERON:0001555,4.38e-09,116;UBERON:0007026,4.38e-09,116;UBERON:0004921,1.57e-08,114;UBERON:0007023,1.41e-07,51;UBERON:0000344,9.73e-07,15
|phase1_expression=8.48788889655408,9.77131141390211,13.6499771816861,24.1971369045464,26.0465779572101,14.7733759282463,8.87728034262997,48.6794929374743,27.3130120974233,26.4492914743853,31.5041061534929,39.8860794976682,13.353656934634,13.2004807652686,3.33109761815663,4.656931149966,4.89693314689703,8.67520954735154,13.1629856261509,9.33657233955666,4.67738095830884,0.496454756004426,0,11.1994695955385,12.15869189656,8.6134794617253,14.2151458732495,10.3426191689227,10.4512880701006,19.9103802510345,11.0865255327652,0,0,0,9.24325183204079,9.14290549471708,13.8835162258411,0.837063261473815,1.5626706890476,1.0470474879476,0,1.36609096991689,2.91306211818692,9.4422613481683,10.3404469843905,12.664725899156,3.12956537739216,1.96222640742402,5.27246838562732,7.38833616482277,4.05960622713551,4.31257693094915,11.4092172119261,23.9369506863744,14.452033363126,18.5226793945882,20.6304076755905,26.814948798427,0,0,1.26766280701236,2.71075625655306,2.66788438833342,5.39939830368839,5.93319817540185,5.6838409195688,2.09720077362883,1.15265491596466,0.518448061542388,0.405017814995072,0.420649922702764,0.285650984403804,0.883474163806454,0.489963196859816,0.479227355091182,0,1.10115880999389,3.31987079021488,3.84016333140609,0.395658863190582,0.365950574409639,1.04182674111352,3.35019598801657,2.8138130501584,5.34793867218835,0.883885756421003,1.70846016958924,0.931997229126503,10.9045718399785,6.57472572929034,23.4790235848359,7.74381489283248,9.51959867190851,19.4293148989614,22.0923981932207,33.6020165323002,12.0782201313307,9.20323741921512,6.75443611967459,8.83348936275851,6.19711047017394,10.2661181931454,28.028576367731,35.5533351576666,9.95858788651585,12.6679932737549,11.1215377903252,12.2176751299394,34.697676408721,9.79718117827843,1.56136794089522,0.913396434936424,2.7673859670727,3.91878865436819,5.99702406392095,7.03732911446183,7.66304399976559,8.82056077211461,3.5384422077995,5.98537344805414,7.06692859073259,7.75800405016355,27.9587641827183,6.44117753425404,7.33063473847093,19.6701932510615,0.958520996047362,0,0.635351135365324,4.6435098215495,5.94750783664214,0.753926112677186,3.47648640384553,4.85859368927628,3.53239675751252,3.40706652442291,3.46253837091075,12.5651040316194,5.81262344397452,114.480369602242,1.43132487258974,0.689706313300419,1.62055916824814,1.9591626318643,2.9255694635071,2.17793324484245,1.96773621575431,34.6662516790281,0.215567992932842,1.13463648100692,0.703804496655795,1.31517439456545,5.00485048606076,5.92028683087683,10.0833246839892,1.39323986772945,0,0,0.284163499395593,0.621377317606506,1.64168241986767,0.180062061461015,1.18372367792605,0.787056926989615,1.07986979021165,1.62773761325285,1.3413670069981,4.78737903705395,2.13927804887525,4.92502392237286,8.18794976413143,9.21059920779594,7.24515380460467,13.0180226197561,3.36463917702604,2.88132914661996,39.9806727410396,14.5447811664949,1.91959425481711,1.85789337488351,1.41754207454303,1.4117846723634,2.00140239460383,3.04361001780095,18.0321043386914,4.6115707322723,5.7807098024062,6.36660710531683,5.8489226135736,8.08937467788799,22.4783571869682,23.299528970761,0.569003702859245,1.71372768914593,0,1.4255592949172,2.32742984601151,5.96154469067708,4.86921335856781,7.0852871030209,8.47793130343424,12.4631135561019,26.9771890649305,0.667380422864376,0.786235980452812,0.449724224769707,1.21716072833102,0.482354319504834,0.50925170356284,0.863088412352432,2.59416362840057,1.64736847912849,5.75072826109418,5.95425516269605,6.55279113540577,15.912469310668,11.8402292924462,21.2275149399882,18.1058126363273,0.947457058852424,1.46668478797823,2.20668611507745,2.58159273117352,5.86271901046355,6.18913466303636,16.0009591243395,11.6650006638581,6.64394068946325,13.0752910299139,15.7308782127108,16.4050732772601,18.0811323226889,7.53956419696361,8.15858525728064,2.45882136509518,4.13905119457099,5.13761887960934,5.74337264301796,7.54100748732707,7.06918596172244,0,0.390438744296638,1.72338718186239,1.19484398976276,1.11399337041197,0.566153061577665,0.809621403349789,2.04579100537918,1.97643888973262,4.81981974632711,6.95506417520516,1.24645922567079,5.04949573996086,7.4236555337641,10.619611067197,0.728341908464944,0.906970670894253,0.754420319023592,2.06711325016541,3.07435147943927,6.20227903603731,3.99887102425256,3.56497378384721,13.9056173491759,17.9211634577498,15.470331487228,9.87274856685985,1.26042765821917,0.258717367565509,2.14337035031592,1.06404140185364,3.38900753443934,2.79733335023606,2.13125464380219,11.4989136951218,3.1774810629573,5.51320995137405,20.1161228588606,11.3025098687134,9.65006798850494,9.07229814423837,9.19189038572343,13.4081184849731,4.26478194624172,8.37267315909478,2.88941615148511,2.40752885580625,4.52084296811258,5.33107488111998,5.71945433016307,13.9382312594961,9.37674730568509,10.6413979829406,21.9574242143476,0.949007980743406,2.23651413839534,3.24016022465404,3.97267762427491,7.86105229486239,12.9469772529428,19.4235620954539,25.6520823144349,62.9928770198113,9.94142900939081,0.56369293868419,2.24274819065968,1.82004339502807,3.30567020184881,3.09983576346555,2.19642963138012,3.99014611395563,2.3436789271911,3.46035836604846,1.93267296660805,2.30424005006292,3.16011120628178,0.608175645870493,1.23253148597793,1.29920822977795,1.61124026100733,0.993406773906324,1.68273629327956,1.62458479892035,2.1202954489111,1.37172251979,1.51239277705261,1.94915761479505,1.92423683280659,1.40252282617883,14.7374749349887,2.44184548711471,2.69141569828427,1.51096154727671,9.46629010757733,18.3928825942158,8.24182309202693,16.291996810009,9.02829787263654,2.25900737046827,4.14292712856459,2.29158205375759,2.92150409984269,4.11049511862385,0.755393897389701,4.72515750162264,1.80128481289688,1.35942722695261,2.5888015587591,0.103787347584177,0.399024873401031,1.19513524027894,3.16038732188782,1.25767897576789,2.02227859295016,2.44471400581777,3.09052585858341,3.20919209591815,2.77966932940177,1.77435509923168,4.14977951049368,3.83930180626518,3.00918216302886,3.67587001315925,2.38146845641537,3.01299247456624,3.8581844092741,4.12085900803307,4.26876868389752,2.40008476669791,3.37204031702741,3.33810665926249,2.90692833264657,2.63506265162926,4.14611578669215,3.65855945745545,3.15683653725411,2.71608227691724,3.36685362994643,3.44041552560105,4.72821515402705,2.86461730218783,3.09873682371932,3.47231899766054,4.49659040288303,4.91256377735358,7.30561583764214,7.26895661861605,7.27951683094401,6.4922993973718
|phase1_expression=8.48788889655408,9.77131141390211,13.6499771816861,24.1971369045464,26.0465779572101,14.7733759282463,8.87728034262997,48.6794929374743,27.3130120974233,26.4492914743853,31.5041061534929,39.8860794976682,13.353656934634,13.2004807652686,3.33109761815663,4.656931149966,4.89693314689703,8.67520954735154,13.1629856261509,9.33657233955666,4.67738095830884,0.496454756004426,0,11.1994695955385,12.15869189656,8.6134794617253,14.2151458732495,10.3426191689227,10.4512880701006,19.9103802510345,11.0865255327652,0,0,0,9.24325183204079,9.14290549471708,13.8835162258411,0.837063261473815,1.5626706890476,1.0470474879476,0,1.36609096991689,2.91306211818692,9.4422613481683,10.3404469843905,12.664725899156,3.12956537739216,1.96222640742402,5.27246838562732,7.38833616482277,4.05960622713551,4.31257693094915,11.4092172119261,23.9369506863744,14.452033363126,18.5226793945882,20.6304076755905,26.814948798427,0,0,1.26766280701236,2.71075625655306,2.66788438833342,5.39939830368839,5.93319817540185,5.6838409195688,2.09720077362883,1.15265491596466,0.518448061542388,0.405017814995072,0.420649922702764,0.285650984403804,0.883474163806454,0.489963196859816,0.479227355091182,0,1.10115880999389,3.31987079021488,3.84016333140609,0.395658863190582,0.365950574409639,1.04182674111352,3.35019598801657,2.8138130501584,5.34793867218835,0.883885756421003,1.70846016958924,0.931997229126503,10.9045718399785,6.57472572929034,23.4790235848359,7.74381489283248,9.51959867190851,19.4293148989614,22.0923981932207,33.6020165323002,12.0782201313307,9.20323741921512,6.75443611967459,8.83348936275851,6.19711047017394,10.2661181931454,28.028576367731,35.5533351576666,9.95858788651585,12.6679932737549,11.1215377903252,12.2176751299394,34.697676408721,9.79718117827843,1.56136794089522,0.913396434936424,2.7673859670727,3.91878865436819,5.99702406392095,7.03732911446183,7.66304399976559,8.82056077211461,3.5384422077995,5.98537344805414,7.06692859073259,7.75800405016355,27.9587641827183,6.44117753425404,7.33063473847093,19.6701932510615,0.958520996047362,0,0.635351135365324,4.6435098215495,5.94750783664214,0.753926112677186,3.47648640384553,4.85859368927628,3.53239675751252,3.40706652442291,3.46253837091075,12.5651040316194,5.81262344397452,114.480369602242,1.43132487258974,0.689706313300419,1.62055916824814,1.9591626318643,2.9255694635071,2.17793324484245,1.96773621575431,34.6662516790281,0.215567992932842,1.13463648100692,0.703804496655795,1.31517439456545,5.00485048606076,5.92028683087683,10.0833246839892,1.39323986772945,0,0,0.284163499395593,0.621377317606506,1.64168241986767,0.180062061461015,1.18372367792605,0.787056926989615,1.07986979021165,1.62773761325285,1.3413670069981,4.78737903705395,2.13927804887525,4.92502392237286,8.18794976413143,9.21059920779594,7.24515380460467,13.0180226197561,3.36463917702604,2.88132914661996,39.9806727410396,14.5447811664949,1.91959425481711,1.85789337488351,1.41754207454303,1.4117846723634,2.00140239460383,3.04361001780095,18.0321043386914,4.6115707322723,5.7807098024062,6.36660710531683,5.8489226135736,8.08937467788799,22.4783571869682,23.299528970761,0.569003702859245,1.71372768914593,0,1.4255592949172,2.32742984601151,5.96154469067708,4.86921335856781,7.0852871030209,8.47793130343424,12.4631135561019,26.9771890649305,0.667380422864376,0.786235980452812,0.449724224769707,1.21716072833102,0.482354319504834,0.50925170356284,0.863088412352432,2.59416362840057,1.64736847912849,5.75072826109418,5.95425516269605,6.55279113540577,15.912469310668,11.8402292924462,21.2275149399882,18.1058126363273,0.947457058852424,1.46668478797823,2.20668611507745,2.58159273117352,5.86271901046355,6.18913466303636,16.0009591243395,11.6650006638581,6.64394068946325,13.0752910299139,15.7308782127108,16.4050732772601,18.0811323226889,7.53956419696361,8.15858525728064,2.45882136509518,4.13905119457099,5.13761887960934,5.74337264301796,7.54100748732707,7.06918596172244,0,0.390438744296638,1.72338718186239,1.19484398976276,1.11399337041197,0.566153061577665,0.809621403349789,2.04579100537918,1.97643888973262,4.81981974632711,6.95506417520516,1.24645922567079,5.04949573996086,7.4236555337641,10.619611067197,0.728341908464944,0.906970670894253,0.754420319023592,2.06711325016541,3.07435147943927,6.20227903603731,3.99887102425256,3.56497378384721,13.9056173491759,17.9211634577498,15.470331487228,9.87274856685985,1.26042765821917,0.258717367565509,2.14337035031592,1.06404140185364,3.38900753443934,2.79733335023606,2.13125464380219,11.4989136951218,3.1774810629573,5.51320995137405,20.1161228588606,11.3025098687134,9.65006798850494,9.07229814423837,9.19189038572343,13.4081184849731,4.26478194624172,8.37267315909478,2.88941615148511,2.40752885580625,4.52084296811258,5.33107488111998,5.71945433016307,13.9382312594961,9.37674730568509,10.6413979829406,21.9574242143476,0.949007980743406,2.23651413839534,3.24016022465404,3.97267762427491,7.86105229486239,12.9469772529428,19.4235620954539,25.6520823144349,62.9928770198113,9.94142900939081,0.56369293868419,2.24274819065968,1.82004339502807,3.30567020184881,3.09983576346555,2.19642963138012,3.99014611395563,2.3436789271911,3.46035836604846,1.93267296660805,2.30424005006292,3.16011120628178,0.608175645870493,1.23253148597793,1.29920822977795,1.61124026100733,0.993406773906324,1.68273629327956,1.62458479892035,2.1202954489111,1.37172251979,1.51239277705261,1.94915761479505,1.92423683280659,1.40252282617883,14.7374749349887,2.44184548711471,2.69141569828427,1.51096154727671,9.46629010757733,18.3928825942158,8.24182309202693,16.291996810009,9.02829787263654,2.25900737046827,4.14292712856459,2.29158205375759,2.92150409984269,4.11049511862385,0.755393897389701,4.72515750162264,1.80128481289688,1.35942722695261,2.5888015587591,0.103787347584177,0.399024873401031,1.19513524027894,3.16038732188782,1.25767897576789,2.02227859295016,2.44471400581777,3.09052585858341,3.20919209591815,2.77966932940177,1.77435509923168,4.14977951049368,3.83930180626518,3.00918216302886,3.67587001315925,2.38146845641537,3.01299247456624,3.8581844092741,4.12085900803307,4.26876868389752,2.40008476669791,3.37204031702741,3.33810665926249,2.90692833264657,2.63506265162926,4.14611578669215,3.65855945745545,3.15683653725411,2.71608227691724,3.36685362994643,3.44041552560105,4.72821515402705,2.86461730218783,3.09873682371932,3.47231899766054,4.49659040288303,4.91256377735358,7.30561583764214,7.26895661861605,7.27951683094401,6.4922993973718
|short_description=p1@Ttc39b
|short_description=p1@Ttc39b
}}
}}

Latest revision as of 06:00, 27 September 2015

Short description:p1@Ttc39b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ttc39b_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000030205, NM_027238, uc008tkq.1, uc008tkr.1, uc008tks.1_5end
EntrezGene:Ttc39b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ttc39b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I324.20
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.77
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E948.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E727.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F226.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E631.50
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F139.89
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.35
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.20
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.66
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.16
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.16
GP2+ M cell, pool1.CNhs13228.11845-124H98.61
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I210.34
Ileum epithelium, pool1.CNhs13199.10252-104B910.45
Ileum epithelium, pool2.CNhs13232.10253-104C119.91
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.09
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.14
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.44
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.34
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.66
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.41
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.94
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.45
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.52
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.63
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C526.81
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.40
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D910.90
Mouse Schwann, donor2.CNhs12573.11746-123F96.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G323.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C819.43
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.09
Mouse hepatocyte, donor8.CNhs13091.11824-124F633.60
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.22
accessory axillary lymph node, adult.CNhs10475.1063-29H934.70
adrenal gland, adult.CNhs10508.49-24D79.80
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C16.00
adrenal gland, neonate N25.CNhs11223.1377-27I37.04
amnion, adult pregnant day17.5.CNhs10488.583-22A87.66
aorta, adult.CNhs10498.46-23H18.82
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H719.67
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.57
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G4114.48
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.93
eyeball, neonate N01.CNhs11140.1532-43E72.18
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A234.67
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B510.08
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E34.79
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G14.93
heart, neonate N16.CNhs11209.782-15G18.19
heart, neonate N20.CNhs11127.821-26I69.21
heart, neonate N25.CNhs11196.1351-25D37.25
heart, neonate N30.CNhs11202.1390-42D213.02
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I339.98
intestine, adult.CNhs10496.178-9A314.54
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D118.03
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F26.37
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E322.48
intestine, neonate N30.CNhs11131.1384-42G123.30
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G75.96
kidney, neonate N10.CNhs11206.758-6D54.87
kidney, neonate N20.CNhs11113.832-19I17.09
kidney, neonate N25.CNhs11122.1353-25F38.48
kidney, neonate N30.CNhs11203.1385-42H112.46
liver, adult pregnant day01.CNhs10466.508-5B226.98
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B96.55
liver, neonate N20.CNhs11220.823-25A315.91
liver, neonate N25.CNhs11198.1368-26H111.84
liver, neonate N30.CNhs11106.1382-42D121.23
lung, adult.CNhs10474.28-22B118.11
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A65.86
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C616.00
lung, neonate N06.CNhs11212.683-20E511.67
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E613.08
lung, neonate N20.CNhs11109.822-18A415.73
lung, neonate N25.CNhs11119.1359-25C716.41
lung, neonate N30.CNhs11133.1394-42H218.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I76.96
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I45.05
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B613.91
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F52.80
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I711.50
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C320.12
skin, neonate N00.CNhs11124.650-25G411.30
skin, neonate N03.CNhs11215.662-22H39.65
skin, neonate N06.CNhs11097.693-20I59.07
skin, neonate N10.CNhs11108.762-6C49.19
small intestine, neonate N16.CNhs11114.790-21I113.41
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G28.37
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D14.52
spleen, neonate N20.CNhs11112.824-19H15.33
spleen, neonate N25.CNhs11099.1354-25G35.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.64
stomach, adult.CNhs10503.33-1H621.96
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C67.86
stomach, neonate N03.CNhs11193.1340-24B812.95
stomach, neonate N07.CNhs11210.718-18A919.42
stomach, neonate N25.CNhs11104.1355-25E425.65
stomach, neonate N30.CNhs11134.1386-42I162.99
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.37
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G71.92
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B414.74
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.69
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E49.47
uterus, adult pregnant day19.CNhs10497.590-15F518.39
uterus, adult.CNhs10509.92-27E58.24
vagina, adult.CNhs10502.89-27D516.29
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.10
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell4.31e-1025
endodermal cell3.28e-0920
endo-epithelial cell8.87e-0715

Uber anatomy
Ontology termp-valuen
endoderm-derived structure2.86e-09118
endoderm2.86e-09118
presumptive endoderm2.86e-09118
digestive system4.38e-09116
digestive tract4.38e-09116
primitive gut4.38e-09116
subdivision of digestive tract1.57e-08114
adult organism1.41e-0751
mucosa9.73e-0715
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:82970039..82970109,-&oldid=4296077"