FFCP PHASE1:Mm9::chr18:43552840..43552872,-: Difference between revisions
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{{FFCP|EntrezGene=22240|HGNC=|MCL_coexpression_id=22|UniProt=Q62188|association_with_transcript=112bp_to_NM_009468,uc008euh.2_5end|description=CAGE_peak_4_at_Dpysl3_5end|id=chr18:43552840..43552872,-|ontology_enrichment_celltype=CL:0000540!7.23e-16!33;CL:0000047!7.23e-16!33;CL:0000031!7.23e-16!33;CL:0000404!7.23e-16!33;CL:0000221!2.44e-15!44;CL:0000133!2.44e-15!44;CL:0000393!3.29e-15!39;CL:0000211!3.29e-15!39;CL:0002319!3.88e-15!43;CL:0000055!5.30e-14!50;CL:0000117!2.59e-10!23;CL:0000337!2.59e-10!23|ontology_enrichment_celltype_v019_2=CL:0000540,1.90e-17,33;CL:0000047,1.90e-17,33;CL:0000031,1.90e-17,33;CL:0000404,1.90e-17,33;CL:0000393,2.93e-16,39;CL:0000211,2.93e-16,39;CL:0000221,7.68e-16,44;CL:0000133,7.68e-16,44;CL:0002319,1.36e-15,43;CL:0000117,6.64e-11,23;CL:0000337,6.64e-11,23;CL:0000107,1.02e-07,9;CL:0002321,2.75e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.62e-12!102;UBERON:0000924!1.62e-12!102;UBERON:0006601!1.62e-12!102;UBERON:0000073!1.62e-11!75;UBERON:0001016!1.62e-11!75;UBERON:0001017!2.46e-11!73;UBERON:0005743!2.46e-11!73;UBERON:0002346!3.35e-10!71;UBERON:0003075!3.35e-10!71;UBERON:0007284!3.35e-10!71;UBERON:0000468!5.74e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.16e-11,92;UBERON:0001017,2.81e-10,73;UBERON:0001016,3.30e-10,75;UBERON:0004121,7.05e-10,95;UBERON:0000924,7.05e-10,95;UBERON:0006601,7.05e-10,95;UBERON:0002346,2.65e-08,64;UBERON:0003075,2.65e-08,64;UBERON:0007284,2.65e-08,64;UBERON:0002410,1.02e-07,9;UBERON:0000010,7.81e-07,11|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,2.0190142737785,0.782391344348039,5.23260375313072,1.31811709640683,0.777719596297134,3.49966054063406,0,0,0,0,4.63066984864705,2.86533439938757,1.03134418455488,63.7296851707733,53.4280889064753,76.6935998242477,3.38844532069132,0.889294796111139,0,0,0,3.29560121570245,1.92109152660777,48.3193593357506,56.0274644076516,54.6844899513593,10.8547374073445,11.0434270475807,60.5104548121873,72.0757942057137,69.8606277823616,2.20231761998777,0.766124028511126,0.307213066512487,53.5458328184587,58.4606042619398,46.3612899795516,1.67509799400829,0.56276261003168,1.06958773443767,19.4454866412621,21.4981238006645,32.0607046819517,0.681535739998656,3.6274348851257,0.289864488701678,0,0,0,0.649776417447669,0,0.421333260395256,1.70430322578058,1.81850203222008,2.47337702157238,2.53518155598025,3.84979432242953,0,0,0.649473123033642,0.760079596425296,1.01104889002957,0.34255163915718,0.776813650941515,0.445326417194474,2.77576522825817,3.34912026143355,3.45923245884088,3.46662073271032,3.29248379979973,0.251333182659351,0,0.144599356919912,0,0.808834249737046,1.32504911076236,0.969750506270444,0,0,0.41889341362691,0.766371165625774,0,0,0,0.449371918214468,0.915001205637253,63.7067565212223,0.173824320192276,0.255715457330331,0.41557608911912,0.648965052271031,2.03678727700633,1.24406970610093,0,0.420883711772948,2.08192708740326,6.89706313300419,10.803727788321,6.78171680260718,6.46346741937615,6.66191345481219,7.40243624021858,1.03481348295606,0.862271971731369,2.08016688184601,1.75951124163949,1.7535658594206,1.94633074457919,0.348252166522167,1.02891068203972,0.796137067273973,0,0,0,4.55676699578104,2.81431271977315,3.96136535214233,4.7348947117042,2.75469924446365,2.00547246753592,2.32533944750408,1.07309360559848,1.5179494507732,1.48103864922132,0.985004784474571,1.13496333364198,0.877199924551994,1.09775057645525,0.671032093801859,0.210289948564127,66.8879980465349,0,0,1.2797295032114,3.25131340604614,2.70621668776396,1.81515172161008,1.55664630691409,1.33157938278791,0,0.988193728344065,0.502670417600539,0.994782360205754,0.19496408711912,0,0.216138049874694,0.398282546508734,0.379335801906163,1.37098215131675,2.25415471346161,0.610953983535943,0.193952487167626,1.1221731182451,1.01178459398812,0.442830443938806,0.627994911365499,0.246794327843601,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.923765950833023,1.13694847062291,1.30371981153621,1.18821560042632,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,1.41871629695572,1.7717175171902,1.59454768657487,0.983179888294428,1.03610989119537,0.578596234326046,0,0,0,0.275936746304732,0.481651769963376,0.703270119553219,0.327869890753351,0.757412781613119,28.0802315280468,29.2829058222479,26.9279247165999,13.6212214832955,14.0363164671908,15.0030561318081,23.074209995469,35.3629588072687,35.5759000151871,0.321321316421807,1.27746076687442,1.24645922567079,1.46598263418218,0.494910368917606,0,0.971122544619926,1.51161778482376,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,2.70091641046965,1.55230420539305,2.14337035031592,1.2413816354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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22240 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=Q62188 | |||
|association_with_transcript=112bp_to_NM_009468,uc008euh.2_5end | |||
|cluster_id=chr18:43552840..43552872,- | |||
|description=CAGE_peak_4_at_Dpysl3_5end | |||
|id=chr18:43552840..43552872,- | |||
|ontology_enrichment_celltype=CL:0000540!7.23e-16!33;CL:0000047!7.23e-16!33;CL:0000031!7.23e-16!33;CL:0000404!7.23e-16!33;CL:0000221!2.44e-15!44;CL:0000133!2.44e-15!44;CL:0000393!3.29e-15!39;CL:0000211!3.29e-15!39;CL:0002319!3.88e-15!43;CL:0000055!5.30e-14!50;CL:0000117!2.59e-10!23;CL:0000337!2.59e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.90e-17,33;CL:0000047,1.90e-17,33;CL:0000031,1.90e-17,33;CL:0000404,1.90e-17,33;CL:0000393,2.93e-16,39;CL:0000211,2.93e-16,39;CL:0000221,7.68e-16,44;CL:0000133,7.68e-16,44;CL:0002319,1.36e-15,43;CL:0000117,6.64e-11,23;CL:0000337,6.64e-11,23;CL:0000107,1.02e-07,9;CL:0002321,2.75e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.62e-12!102;UBERON:0000924!1.62e-12!102;UBERON:0006601!1.62e-12!102;UBERON:0000073!1.62e-11!75;UBERON:0001016!1.62e-11!75;UBERON:0001017!2.46e-11!73;UBERON:0005743!2.46e-11!73;UBERON:0002346!3.35e-10!71;UBERON:0003075!3.35e-10!71;UBERON:0007284!3.35e-10!71;UBERON:0000468!5.74e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.16e-11,92;UBERON:0001017,2.81e-10,73;UBERON:0001016,3.30e-10,75;UBERON:0004121,7.05e-10,95;UBERON:0000924,7.05e-10,95;UBERON:0006601,7.05e-10,95;UBERON:0002346,2.65e-08,64;UBERON:0003075,2.65e-08,64;UBERON:0007284,2.65e-08,64;UBERON:0002410,1.02e-07,9;UBERON:0000010,7.81e-07,11 | |||
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0.159992422793407,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,2.0190142737785,0.782391344348039,5.23260375313072,1.31811709640683,0.777719596297134,3.49966054063406,0,0,0,0,4.63066984864705,2.86533439938757,1.03134418455488,63.7296851707733,53.4280889064753,76.6935998242477,3.38844532069132,0.889294796111139,0,0,0,3.29560121570245,1.92109152660777,48.3193593357506,56.0274644076516,54.6844899513593,10.8547374073445,11.0434270475807,60.5104548121873,72.0757942057137,69.8606277823616,2.20231761998777,0.766124028511126,0.307213066512487,53.5458328184587,58.4606042619398,46.3612899795516,1.67509799400829,0.56276261003168,1.06958773443767,19.4454866412621,21.4981238006645,32.0607046819517,0.681535739998656,3.6274348851257,0.289864488701678,0,0,0,0.649776417447669,0,0.421333260395256,1.70430322578058,1.81850203222008,2.47337702157238,2.53518155598025,3.84979432242953,0,0,0.649473123033642,0.760079596425296,1.01104889002957,0.34255163915718,0.776813650941515,0.445326417194474,2.77576522825817,3.34912026143355,3.45923245884088,3.46662073271032,3.29248379979973,0.251333182659351,0,0.144599356919912,0,0.808834249737046,1.32504911076236,0.969750506270444,0,0,0.41889341362691,0.766371165625774,0,0,0,0.449371918214468,0.915001205637253,63.7067565212223,0.173824320192276,0.255715457330331,0.41557608911912,0.648965052271031,2.03678727700633,1.24406970610093,0,0.420883711772948,2.08192708740326,6.89706313300419,10.803727788321,6.78171680260718,6.46346741937615,6.66191345481219,7.40243624021858,1.03481348295606,0.862271971731369,2.08016688184601,1.75951124163949,1.7535658594206,1.94633074457919,0.348252166522167,1.02891068203972,0.796137067273973,0,0,0,4.55676699578104,2.81431271977315,3.96136535214233,4.7348947117042,2.75469924446365,2.00547246753592,2.32533944750408,1.07309360559848,1.5179494507732,1.48103864922132,0.985004784474571,1.13496333364198,0.877199924551994,1.09775057645525,0.671032093801859,0.210289948564127,66.8879980465349,0,0,1.2797295032114,3.25131340604614,2.70621668776396,1.81515172161008,1.55664630691409,1.33157938278791,0,0.988193728344065,0.502670417600539,0.994782360205754,0.19496408711912,0,0.216138049874694,0.398282546508734,0.379335801906163,1.37098215131675,2.25415471346161,0.610953983535943,0.193952487167626,1.1221731182451,1.01178459398812,0.442830443938806,0.627994911365499,0.246794327843601,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.923765950833023,1.13694847062291,1.30371981153621,1.18821560042632,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,1.41871629695572,1.7717175171902,1.59454768657487,0.983179888294428,1.03610989119537,0.578596234326046,0,0,0,0.275936746304732,0.481651769963376,0.703270119553219,0.327869890753351,0.757412781613119,28.0802315280468,29.2829058222479,26.9279247165999,13.6212214832955,14.0363164671908,15.0030561318081,23.074209995469,35.3629588072687,35.5759000151871,0.321321316421807,1.27746076687442,1.24645922567079,1.46598263418218,0.494910368917606,0,0.971122544619926,1.51161778482376,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,2.70091641046965,1.55230420539305,2.14337035031592,1.24138163549592,2.49716344642899,4.93647061806363,2.13125464380219,0.23467170806371,0.21183207086382,0.220528398054962,0,0.968786560175433,0.603129249281559,0.477489376012546,0.164140899745061,0,0.927126510052548,0.512612642393558,0.82554747185289,1.11116716421827,0.376736914009382,0.546776910884101,0.457556346413045,0,0,0,0,3.79603192297362,3.45643094115643,1.83609079397062,1.88179466413022,2.18362563746178,0.134864346384821,0.661227645802687,0,0.388844919875379,1.24267862617385,0,1.19613236835183,0.496375471371293,1.16670713006429,0.645799117388655,0.844780627453891,1.5256441023948,0.651021924219751,0.838874755405687,0,0,0,1.41907650703115,0.513554785824136,0.129920822977795,0.179026695667481,0.79472541912506,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.233753804363138,0.680191150845634,0,0,0,1.35232715822533,0.187682475451182,0.36630324853453,0.428736758158132,0,1.12950368523413,5.06357760157895,1.14579102687879,1.54667864109319,0,0,1.35004500046361,0.45032120322422,0.453142408984205,1.03552062350364,4.25528125095124,3.19219898720825,6.65861062441123,2.67417388775123,7.96530017986333,5.1476182366004,5.33392146723877,8.03536723231687,4.81378814387723,7.32821914115013,5.57654459758527,5.28153755881013,5.99305647807247,5.37811280200902,4.53740204749345,6.19181798667996,7.06894388263618,7.33055037762079,6.59337441285291,7.06554816645107,7.54312355247914,7.27650805253284,6.91464950847231,7.1219744149841,6.7758753899038,5.16149108139227,4.75612729469209,5.78753365163254,7.19761803383067,6.17256498823512,6.8808310512021,6.89531376628944,4.50154147486658,6.04253680625267,5.01557188550968,16.9871192997803,3.97683734357194,4.94203424311086,1.14772999241306,2.8676884485537,0.695603506861264 | |||
|short_description=p4@Dpysl3 | |||
}} |
Latest revision as of 07:13, 27 September 2015
Short description: | p4@Dpysl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dpysl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 112bp_to_NM_009468, uc008euh.2_5end |
EntrezGene: | Dpysl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.90e-17 | 33 |
neuronal stem cell | 1.90e-17 | 33 |
neuroblast | 1.90e-17 | 33 |
electrically signaling cell | 1.90e-17 | 33 |
electrically responsive cell | 2.93e-16 | 39 |
electrically active cell | 2.93e-16 | 39 |
ectodermal cell | 7.68e-16 | 44 |
neurectodermal cell | 7.68e-16 | 44 |
neural cell | 1.36e-15 | 43 |
CNS neuron (sensu Vertebrata) | 6.64e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.64e-11 | 23 |
autonomic neuron | 1.02e-07 | 9 |
embryonic cell | 2.75e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.16e-11 | 92 |
central nervous system | 2.81e-10 | 73 |
nervous system | 3.30e-10 | 75 |
ectoderm-derived structure | 7.05e-10 | 95 |
ectoderm | 7.05e-10 | 95 |
presumptive ectoderm | 7.05e-10 | 95 |
neurectoderm | 2.65e-08 | 64 |
neural plate | 2.65e-08 | 64 |
presumptive neural plate | 2.65e-08 | 64 |
autonomic nervous system | 1.02e-07 | 9 |
peripheral nervous system | 7.81e-07 | 11 |