FFCP PHASE1:Mm9::chr3:108714588..108714602,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:108714588..108714602,-
|short_description=p2@Prpf38b
|description=CAGE_peak_2_at_Prpf38b_5end
|association_with_transcript=11bp_to_ENSMUST00000129273_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=66921 | |EntrezGene=66921 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENSMUST00000129273_5end | |||
|cluster_id=chr3:108714588..108714602,- | |||
|description=CAGE_peak_2_at_Prpf38b_5end | |||
|id=chr3:108714588..108714602,- | |||
|ontology_enrichment_celltype=CL:0000988!6.64e-09!32;CL:0002032!6.64e-09!32;CL:0000037!6.64e-09!32;CL:0000566!6.64e-09!32;CL:0000837!6.64e-09!32;CL:0000542!1.64e-07!13;CL:0000051!1.64e-07!13;CL:0000838!2.70e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.37e-09,32;CL:0002032,5.37e-09,32;CL:0000037,5.37e-09,32;CL:0000837,5.37e-09,32;CL:0000542,1.60e-07,13;CL:0000051,1.60e-07,13;CL:0000838,2.64e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-08!45;UBERON:0003061!2.10e-08!45;UBERON:0002193!8.48e-08!48;UBERON:0004177!8.71e-08!29;UBERON:0002370!9.43e-07!23;UBERON:0000974!9.43e-07!23;UBERON:0004807!9.43e-07!23;UBERON:0005058!9.43e-07!23;UBERON:0003351!9.43e-07!23;UBERON:0009113!9.43e-07!23;UBERON:0003295!9.43e-07!23;UBERON:0009722!9.43e-07!23;UBERON:0005562!9.43e-07!23;UBERON:0007690!9.43e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.71e-08,45;UBERON:0003061,1.71e-08,45;UBERON:0004177,5.96e-08,29;UBERON:0005057,5.96e-08,29;UBERON:0002193,7.07e-08,48;UBERON:0002405,7.07e-08,48;UBERON:0000077,8.65e-08,35;UBERON:0002370,6.42e-07,23;UBERON:0000974,6.42e-07,23;UBERON:0004807,6.42e-07,23;UBERON:0005058,6.42e-07,23;UBERON:0003351,6.42e-07,23;UBERON:0009113,6.42e-07,23;UBERON:0003295,6.42e-07,23;UBERON:0009722,6.42e-07,23;UBERON:0005562,6.42e-07,23;UBERON:0007690,6.42e-07,23 | |||
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| ||
|short_description=p2@Prpf38b | |||
}} | }} |
Latest revision as of 07:50, 27 September 2015
Short description: | p2@Prpf38b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prpf38b_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENSMUST00000129273_5end |
EntrezGene: | Prpf38b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.37e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.37e-09 | 32 |
hematopoietic stem cell | 5.37e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.37e-09 | 32 |
lymphocyte | 1.60e-07 | 13 |
common lymphoid progenitor | 1.60e-07 | 13 |
lymphoid lineage restricted progenitor cell | 2.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.71e-08 | 45 |
blood island | 1.71e-08 | 45 |
hemopoietic organ | 5.96e-08 | 29 |
immune organ | 5.96e-08 | 29 |
hemolymphoid system | 7.07e-08 | 48 |
immune system | 7.07e-08 | 48 |
mixed endoderm/mesoderm-derived structure | 8.65e-08 | 35 |
thymus | 6.42e-07 | 23 |
neck | 6.42e-07 | 23 |
respiratory system epithelium | 6.42e-07 | 23 |
hemolymphoid system gland | 6.42e-07 | 23 |
pharyngeal epithelium | 6.42e-07 | 23 |
thymic region | 6.42e-07 | 23 |
pharyngeal gland | 6.42e-07 | 23 |
entire pharyngeal arch endoderm | 6.42e-07 | 23 |
thymus primordium | 6.42e-07 | 23 |
early pharyngeal endoderm | 6.42e-07 | 23 |