Personal tools

FFCP PHASE1:Mm9::chr15:92427560..92427598,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=239618
|EntrezGene=239618
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=E9Q5P6,E9Q0V9,Q3UXJ7,Q69Z24
|UniProt=E9Q5P6,E9Q0V9,Q3UXJ7,Q69Z24
|association_with_transcript=20bp_to_ENSMUST00000035399,ENSMUST00000166460,NM_001164594,uc007xio.2_5end
|association_with_transcript=20bp_to_ENSMUST00000035399,ENSMUST00000166460,NM_001164594,uc007xio.2_5end
|cluster_id=chr15:92427560..92427598,+
|description=CAGE_peak_1_at_Pdzrn4_5end
|description=CAGE_peak_1_at_Pdzrn4_5end
|id=chr15:92427560..92427598,+
|id=chr15:92427560..92427598,+
|ontology_enrichment_celltype=CL:0000540!4.64e-15!33;CL:0000047!4.64e-15!33;CL:0000031!4.64e-15!33;CL:0000404!4.64e-15!33;CL:0000393!2.23e-11!39;CL:0000211!2.23e-11!39;CL:0000221!4.95e-11!44;CL:0000133!4.95e-11!44;CL:0002319!5.74e-11!43;CL:0000117!6.81e-11!23;CL:0000337!6.81e-11!23;CL:0000055!4.70e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.29e-19,33;CL:0000047,1.29e-19,33;CL:0000031,1.29e-19,33;CL:0000404,1.29e-19,33;CL:0000393,7.59e-15,39;CL:0000211,7.59e-15,39;CL:0000117,2.22e-14,23;CL:0000337,2.22e-14,23;CL:0002319,1.72e-13,43;CL:0000221,6.21e-13,44;CL:0000133,6.21e-13,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.47e-21!73;UBERON:0005743!1.47e-21!73;UBERON:0000073!4.86e-20!75;UBERON:0001016!4.86e-20!75;UBERON:0004121!2.71e-18!102;UBERON:0000924!2.71e-18!102;UBERON:0006601!2.71e-18!102;UBERON:0002346!1.30e-16!71;UBERON:0003075!1.30e-16!71;UBERON:0007284!1.30e-16!71;UBERON:0001049!6.80e-16!52;UBERON:0005068!6.80e-16!52;UBERON:0006241!6.80e-16!52;UBERON:0007135!6.80e-16!52;UBERON:0002020!2.67e-13!34;UBERON:0000033!3.30e-13!63;UBERON:0000955!1.90e-12!50;UBERON:0006238!1.90e-12!50;UBERON:0002616!3.13e-12!49;UBERON:0003056!1.06e-11!49;UBERON:0003080!1.62e-11!40;UBERON:0002780!2.65e-11!39;UBERON:0001890!2.65e-11!39;UBERON:0006240!2.65e-11!39;UBERON:0002791!2.60e-10!29;UBERON:0003528!2.60e-10!29;UBERON:0001893!2.60e-10!29;UBERON:0000468!5.18e-08!333;UBERON:0000956!8.90e-07!21;UBERON:0001869!8.90e-07!21;UBERON:0000203!8.90e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.24e-19,73;UBERON:0001016,1.25e-18,75;UBERON:0004121,5.99e-16,95;UBERON:0000924,5.99e-16,95;UBERON:0006601,5.99e-16,95;UBERON:0002020,1.06e-15,34;UBERON:0002346,3.49e-15,64;UBERON:0003075,3.49e-15,64;UBERON:0007284,3.49e-15,64;UBERON:0010371,1.11e-13,73;UBERON:0001049,1.70e-13,52;UBERON:0005068,1.70e-13,52;UBERON:0006241,1.70e-13,52;UBERON:0007135,1.70e-13,52;UBERON:0000073,4.47e-13,54;UBERON:0003528,1.13e-11,29;UBERON:0002791,1.13e-11,29;UBERON:0001893,1.13e-11,29;UBERON:0003080,1.58e-10,40;UBERON:0002780,3.09e-10,39;UBERON:0001890,3.09e-10,39;UBERON:0006240,3.09e-10,39;UBERON:0003056,4.92e-10,49;UBERON:0000955,8.05e-10,47;UBERON:0006238,8.05e-10,47;UBERON:0002616,1.52e-09,46;UBERON:0010314,1.14e-08,92;UBERON:0000956,1.58e-07,21;UBERON:0001869,1.58e-07,21;UBERON:0000203,1.58e-07,21
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.96222640742402,0,0,0.419959264876088,0,0,0,0,0.514518872071894,0,0.515672092277442,10.5204559646991,14.8117474196169,7.60597684207415,0,0,0,0,0,0.599200221036809,0.384218305321555,1.65903379693564,1.4850653216486,2.3135745748652,2.28520787523043,3.09215957332259,4.28717797252339,2.39613677545591,2.75765635983006,0,1.27687338085188,1.38245879930619,15.8263545276233,16.5592634920361,15.106487746146,0.558365998002762,1.68828783009504,2.13917546887534,4.71405736757868,3.70166370077668,7.82877672466262,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,3.24736561516821,1.77351905832569,3.53867111510348,0.22836775943812,0,0,0.173485326766136,1.21786191324856,0.922461989024234,1.20578112442098,0.23517741427141,0,0,0.144599356919912,0,1.61766849947409,0.441683036920787,0.484875253135222,0,0.878342391034642,0.83778682725382,0.255457055208591,0,0,0,1.3481157546434,2.28750301409313,2.76439574648302,1.21677024134594,0.767146371990992,1.45451631191692,2.75810147215188,0,0.124406970610093,0.505445516867349,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,1.20563854268572,1.7009124787832,1.15302348256365,1.03071897015702,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.834141747676794,0.348252166522167,0.411564272815887,1.59227413454795,0,0,0,0.621377317606506,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0,2.52347938276953,5.76265829323993,0,0,0.213288250535234,0.464473343720877,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,1.13800740571849,1.94222471436539,2.25415471346161,2.03651327845314,0.969762435838129,1.47285221769669,1.13825766823663,1.62371162777562,2.82597710114475,1.60416313098341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,1.46668478797823,0.848725428875941,0.469380496577004,0.670025029767263,0.238043640886014,0.585400943573396,1.41871629695572,1.32878813789265,0.956728611944923,0,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0.642202359951168,1.64096361229084,0.163934945376675,0.757412781613119,3.78609863299508,3.12350995437311,3.01592756825919,1.43381278771531,1.55959071857676,2.26461224631066,2.02405350837447,2.92255857911312,0.395287777946524,1.28528526568723,0.283880170416537,0.534196811001766,0.325773918707152,1.97964147567043,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0.316036757935816,0,0,3.74483566329167,0.18006109403131,0.258717367565509,0.428674070063185,0.709360934569094,0.891844088010353,0.658196082408484,1.2178597964584,0.704015124191131,0,0,4.28704257647848,0.161464426695906,0.482503399425247,0.238744688006273,0.328281799490123,0.291480836629851,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.632671987162271,1.62655573701479,0.648032044930808,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0.598066184175915,0.827292452285488,0.388902376688095,0.516639293910924,0.337912250981556,0.234714477291508,0,0,0,0,0,0.202725215290164,0.308132871494482,0.389762468933385,0,0.39736270956253,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0,0.194915761479505,0,0.116876902181569,1.81384306892169,0,0,0,0,3.00291960721891,2.74727436400898,0,0,2.82375921308533,2.76195141904306,1.71868654031819,1.71853182343688,3.42541259885321,0.755393897389701,3.37511250115903,2.70192721934532,0.906284817968409,0.51776031175182,2.07574695168353,1.59609949360412,2.90247129782028,1.94485373654635,1.04806581313991,1.10306105070008,2.22246727801615,2.06035057238894,3.20919209591815,1.51618327058278,1.2673964994512,2.45214243801899,3.183811253976,2.56100609619477,2.1825478203133,2.38146845641537,1.39061191133827,2.31491064556446,2.47251540481984,2.94397840268795,2.05721551431249,2.48466128623072,2.38436189947321,1.88950341622027,2.25862512996793,2.5384382367503,2.19513567447327,0.789209134313529,2.17286582153379,2.24456908663095,1.89816028998679,1.77308068276014,2.45538625901814,1.08455788830176,0.771626443924566,1.99848462350357,1.63752125911786,0.644613162144895,0.956441660344217,0.661774257358546,1.39120701372253
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,1.96222640742402,0,0,0.419959264876088,0,0,0,0,0.514518872071894,0,0.515672092277442,10.5204559646991,14.8117474196169,7.60597684207415,0,0,0,0,0,0.599200221036809,0.384218305321555,1.65903379693564,1.4850653216486,2.3135745748652,2.28520787523043,3.09215957332259,4.28717797252339,2.39613677545591,2.75765635983006,0,1.27687338085188,1.38245879930619,15.8263545276233,16.5592634920361,15.106487746146,0.558365998002762,1.68828783009504,2.13917546887534,4.71405736757868,3.70166370077668,7.82877672466262,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,3.24736561516821,1.77351905832569,3.53867111510348,0.22836775943812,0,0,0.173485326766136,1.21786191324856,0.922461989024234,1.20578112442098,0.23517741427141,0,0,0.144599356919912,0,1.61766849947409,0.441683036920787,0.484875253135222,0,0.878342391034642,0.83778682725382,0.255457055208591,0,0,0,1.3481157546434,2.28750301409313,2.76439574648302,1.21677024134594,0.767146371990992,1.45451631191692,2.75810147215188,0,0.124406970610093,0.505445516867349,0.420883711772948,0.260240885925407,0.229902104433473,0.180062129805349,1.20563854268572,1.7009124787832,1.15302348256365,1.03071897015702,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0.834141747676794,0.348252166522167,0.411564272815887,1.59227413454795,0,0,0,0.621377317606506,0,0.180062061461015,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0,0,2.52347938276953,5.76265829323993,0,0,0.213288250535234,0.464473343720877,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,1.13800740571849,1.94222471436539,2.25415471346161,2.03651327845314,0.969762435838129,1.47285221769669,1.13825766823663,1.62371162777562,2.82597710114475,1.60416313098341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,1.46668478797823,0.848725428875941,0.469380496577004,0.670025029767263,0.238043640886014,0.585400943573396,1.41871629695572,1.32878813789265,0.956728611944923,0,0.345369963731791,0.289298117163023,0,0,0,0.275936746304732,0.642202359951168,1.64096361229084,0.163934945376675,0.757412781613119,3.78609863299508,3.12350995437311,3.01592756825919,1.43381278771531,1.55959071857676,2.26461224631066,2.02405350837447,2.92255857911312,0.395287777946524,1.28528526568723,0.283880170416537,0.534196811001766,0.325773918707152,1.97964147567043,0,0.242780636154981,0.604647113929502,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0,0,0.316036757935816,0,0,3.74483566329167,0.18006109403131,0.258717367565509,0.428674070063185,0.709360934569094,0.891844088010353,0.658196082408484,1.2178597964584,0.704015124191131,0,0,4.28704257647848,0.161464426695906,0.482503399425247,0.238744688006273,0.328281799490123,0.291480836629851,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.632671987162271,1.62655573701479,0.648032044930808,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0.598066184175915,0.827292452285488,0.388902376688095,0.516639293910924,0.337912250981556,0.234714477291508,0,0,0,0,0,0.202725215290164,0.308132871494482,0.389762468933385,0,0.39736270956253,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0,0.194915761479505,0,0.116876902181569,1.81384306892169,0,0,0,0,3.00291960721891,2.74727436400898,0,0,2.82375921308533,2.76195141904306,1.71868654031819,1.71853182343688,3.42541259885321,0.755393897389701,3.37511250115903,2.70192721934532,0.906284817968409,0.51776031175182,2.07574695168353,1.59609949360412,2.90247129782028,1.94485373654635,1.04806581313991,1.10306105070008,2.22246727801615,2.06035057238894,3.20919209591815,1.51618327058278,1.2673964994512,2.45214243801899,3.183811253976,2.56100609619477,2.1825478203133,2.38146845641537,1.39061191133827,2.31491064556446,2.47251540481984,2.94397840268795,2.05721551431249,2.48466128623072,2.38436189947321,1.88950341622027,2.25862512996793,2.5384382367503,2.19513567447327,0.789209134313529,2.17286582153379,2.24456908663095,1.89816028998679,1.77308068276014,2.45538625901814,1.08455788830176,0.771626443924566,1.99848462350357,1.63752125911786,0.644613162144895,0.956441660344217,0.661774257358546,1.39120701372253
|short_description=p1@Pdzrn4
|short_description=p1@Pdzrn4
}}
}}

Latest revision as of 08:51, 27 September 2015

Short description:p1@Pdzrn4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pdzrn4_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 20bp_to_ENSMUST00000035399, ENSMUST00000166460, NM_001164594, uc007xio.2_5end
EntrezGene:Pdzrn4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pdzrn4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.83
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.64
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.29e-1933
neuronal stem cell1.29e-1933
neuroblast1.29e-1933
electrically signaling cell1.29e-1933
electrically responsive cell7.59e-1539
electrically active cell7.59e-1539
CNS neuron (sensu Vertebrata)2.22e-1423
neuroblast (sensu Vertebrata)2.22e-1423
neural cell1.72e-1343
ectodermal cell6.21e-1344
neurectodermal cell6.21e-1344

Uber anatomy
Ontology termp-valuen
central nervous system1.24e-1973
nervous system1.25e-1875
ectoderm-derived structure5.99e-1695
ectoderm5.99e-1695
presumptive ectoderm5.99e-1695
gray matter1.06e-1534
neurectoderm3.49e-1564
neural plate3.49e-1564
presumptive neural plate3.49e-1564
ecto-epithelium1.11e-1373
neural tube1.70e-1352
neural rod1.70e-1352
future spinal cord1.70e-1352
neural keel1.70e-1352
regional part of nervous system4.47e-1354
brain grey matter1.13e-1129
regional part of telencephalon1.13e-1129
telencephalon1.13e-1129
anterior neural tube1.58e-1040
regional part of forebrain3.09e-1039
forebrain3.09e-1039
future forebrain3.09e-1039
pre-chordal neural plate4.92e-1049
brain8.05e-1047
future brain8.05e-1047
regional part of brain1.52e-0946
structure with developmental contribution from neural crest1.14e-0892
cerebral cortex1.58e-0721
cerebral hemisphere1.58e-0721
pallium1.58e-0721
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:92427560..92427598,%2B&oldid=4301243"