FFCP PHASE1:Mm9::chr11:42969283..42969286,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319767 | |EntrezGene=319767 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-70bp_to_ENSMUST00000137991_5end | |association_with_transcript=-70bp_to_ENSMUST00000137991_5end | ||
|cluster_id=chr11:42969283..42969286,+ | |||
|description=CAGE_peak_3_at_Atp10b_5end | |description=CAGE_peak_3_at_Atp10b_5end | ||
|id=chr11:42969283..42969286,+ | |id=chr11:42969283..42969286,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.17e-14!15;CL:0002563!3.40e-14!9;CL:0002251!3.40e-14!9;CL:0000066!5.03e-12!25;CL:0000223!6.12e-10!20;CL:0000239!1.14e-09!6;CL:0000677!1.14e-09!6;CL:0000212!1.14e-09!6;CL:0000584!1.14e-09!6;CL:0000075!3.89e-08!7 | |ontology_enrichment_celltype=CL:0002076!2.17e-14!15;CL:0002563!3.40e-14!9;CL:0002251!3.40e-14!9;CL:0000066!5.03e-12!25;CL:0000223!6.12e-10!20;CL:0000239!1.14e-09!6;CL:0000677!1.14e-09!6;CL:0000212!1.14e-09!6;CL:0000584!1.14e-09!6;CL:0000075!3.89e-08!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.25e-31,15;CL:0002563,8.86e-28,9;CL:0002251,8.86e-28,9;CL:0000066,1.55e-25,25;CL:0000223,4.33e-23,20;CL:0000239,1.84e-16,6;CL:0000677,1.84e-16,6;CL:0000584,1.84e-16,6;CL:0000075,4.29e-14,7;CL:0000068,1.81e-13,3;CL:0002202,1.81e-13,3;CL:0000069,1.81e-13,3;CL:0002632,1.81e-13,3;CL:0002368,1.81e-13,3;CL:0000307,1.81e-13,3;CL:0000377,1.81e-13,3;CL:0002250,3.52e-13,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.11e-22!15;UBERON:0000160!3.31e-20!43;UBERON:0001242!3.65e-19!13;UBERON:0000060!3.65e-19!13;UBERON:0001262!3.65e-19!13;UBERON:0004786!3.65e-19!13;UBERON:0005409!6.95e-19!59;UBERON:0003350!3.40e-14!9;UBERON:0004808!3.40e-14!9;UBERON:0001277!3.40e-14!9;UBERON:0004923!9.80e-14!24;UBERON:0000485!3.41e-11!11;UBERON:0004119!3.80e-11!130;UBERON:0000925!3.80e-11!130;UBERON:0006595!3.80e-11!130;UBERON:0001007!1.01e-10!128;UBERON:0001555!1.01e-10!128;UBERON:0007026!1.01e-10!128;UBERON:0004921!2.42e-09!126;UBERON:0004185!2.42e-09!126 | |ontology_enrichment_uberon=UBERON:0000344!5.11e-22!15;UBERON:0000160!3.31e-20!43;UBERON:0001242!3.65e-19!13;UBERON:0000060!3.65e-19!13;UBERON:0001262!3.65e-19!13;UBERON:0004786!3.65e-19!13;UBERON:0005409!6.95e-19!59;UBERON:0003350!3.40e-14!9;UBERON:0004808!3.40e-14!9;UBERON:0001277!3.40e-14!9;UBERON:0004923!9.80e-14!24;UBERON:0000485!3.41e-11!11;UBERON:0004119!3.80e-11!130;UBERON:0000925!3.80e-11!130;UBERON:0006595!3.80e-11!130;UBERON:0001007!1.01e-10!128;UBERON:0001555!1.01e-10!128;UBERON:0007026!1.01e-10!128;UBERON:0004921!2.42e-09!126;UBERON:0004185!2.42e-09!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.78e-36,15;UBERON:0001242,3.46e-29,13;UBERON:0001262,3.46e-29,13;UBERON:0004786,3.46e-29,13;UBERON:0003350,8.86e-28,9;UBERON:0004808,8.86e-28,9;UBERON:0001277,8.86e-28,9;UBERON:0000485,1.50e-22,11;UBERON:0004923,7.21e-22,24;UBERON:0000160,7.22e-20,31;UBERON:0005409,1.81e-14,47;UBERON:0003126,1.81e-13,3;UBERON:0001005,1.81e-13,3;UBERON:0007196,1.81e-13,3;UBERON:0001558,1.81e-13,3;UBERON:0001007,1.49e-09,116;UBERON:0001555,1.49e-09,116;UBERON:0007026,1.49e-09,116;UBERON:0001155,1.67e-09,2;UBERON:0000059,1.67e-09,2;UBERON:0004119,2.45e-09,118;UBERON:0000925,2.45e-09,118;UBERON:0006595,2.45e-09,118;UBERON:0001962,9.83e-09,2;UBERON:0001961,9.83e-09,2;UBERON:0001744,9.83e-09,2;UBERON:0004921,1.89e-07,114 | |||
|phase1_expression=0,1.74487703819681,1.81999695755814,0.30246421130683,1.00179145989269,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,1.14846392823004,2.58457197695445,0.861884930743556,0.570070258369122,1.00812051903972,0.443461021310609,0,0,0,2.02196133825892,2.99222361645286,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24736561516821,1.52015919285059,3.53867111510348,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,6.57079171927554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0,0,0.444756087689741,0.190225626112559,0.949058123089023,0.658795818896044,0.754005626400808,0.795825888164603,0.19496408711912,0.898819408654221,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,1.55537967950151,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0.476872379894642,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,1.81999695755814,0.30246421130683,1.00179145989269,1.6787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,1.14704640533585,1.14846392823004,2.58457197695445,0.861884930743556,0.570070258369122,1.00812051903972,0.443461021310609,0,0,0,2.02196133825892,2.99222361645286,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24736561516821,1.52015919285059,3.53867111510348,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,6.57079171927554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0,0,0,0,0,0.444756087689741,0.190225626112559,0.949058123089023,0.658795818896044,0.754005626400808,0.795825888164603,0.19496408711912,0.898819408654221,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,1.55537967950151,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.915758121336325,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0.476872379894642,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@Atp10b | |short_description=p3@Atp10b | ||
}} | }} |
Latest revision as of 12:35, 1 October 2015
Short description: | p3@Atp10b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Atp10b_5end |
Coexpression cluster: | NA |
Association with transcript: | -70bp_to_ENSMUST00000137991_5end |
EntrezGene: | Atp10b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.25e-31 | 15 |
intestinal epithelial cell | 8.86e-28 | 9 |
epithelial cell of alimentary canal | 8.86e-28 | 9 |
epithelial cell | 1.55e-25 | 25 |
endodermal cell | 4.33e-23 | 20 |
brush border epithelial cell | 1.84e-16 | 6 |
gut absorptive cell | 1.84e-16 | 6 |
enterocyte | 1.84e-16 | 6 |
columnar/cuboidal epithelial cell | 4.29e-14 | 7 |
duct epithelial cell | 1.81e-13 | 3 |
epithelial cell of tracheobronchial tree | 1.81e-13 | 3 |
branched duct epithelial cell | 1.81e-13 | 3 |
epithelial cell of lower respiratory tract | 1.81e-13 | 3 |
respiratory epithelial cell | 1.81e-13 | 3 |
tracheal epithelial cell | 1.81e-13 | 3 |
tracheoblast | 1.81e-13 | 3 |
intestinal crypt stem cell | 3.52e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.78e-36 | 15 |
intestinal mucosa | 3.46e-29 | 13 |
wall of intestine | 3.46e-29 | 13 |
gastrointestinal system mucosa | 3.46e-29 | 13 |
epithelium of mucosa | 8.86e-28 | 9 |
gastrointestinal system epithelium | 8.86e-28 | 9 |
intestinal epithelium | 8.86e-28 | 9 |
simple columnar epithelium | 1.50e-22 | 11 |
organ component layer | 7.21e-22 | 24 |
intestine | 7.22e-20 | 31 |
gastrointestinal system | 1.81e-14 | 47 |
trachea | 1.81e-13 | 3 |
respiratory airway | 1.81e-13 | 3 |
tracheobronchial tree | 1.81e-13 | 3 |
lower respiratory tract | 1.81e-13 | 3 |
digestive system | 1.49e-09 | 116 |
digestive tract | 1.49e-09 | 116 |
primitive gut | 1.49e-09 | 116 |
colon | 1.67e-09 | 2 |
large intestine | 1.67e-09 | 2 |
endoderm-derived structure | 2.45e-09 | 118 |
endoderm | 2.45e-09 | 118 |
presumptive endoderm | 2.45e-09 | 118 |
gut-associated lymphoid tissue | 9.83e-09 | 2 |
mucosa-associated lymphoid tissue | 9.83e-09 | 2 |
lymphoid tissue | 9.83e-09 | 2 |
subdivision of digestive tract | 1.89e-07 | 114 |