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FFCP PHASE1:Mm9::chr3:123393659..123393718,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=83398
|EntrezGene=83398
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=E9PZJ4
|UniProt=E9PZJ4
|association_with_transcript=16bp_to_ENSMUST00000154668_5end
|association_with_transcript=16bp_to_ENSMUST00000154668_5end
|cluster_id=chr3:123393659..123393718,-
|description=CAGE_peak_1_at_Ndst3_5end
|description=CAGE_peak_1_at_Ndst3_5end
|id=chr3:123393659..123393718,-
|id=chr3:123393659..123393718,-
|ontology_enrichment_celltype=CL:0000540!3.80e-13!33;CL:0000047!3.80e-13!33;CL:0000031!3.80e-13!33;CL:0000404!3.80e-13!33;CL:0000221!7.69e-11!44;CL:0000133!7.69e-11!44;CL:0002319!9.19e-11!43;CL:0000393!9.86e-11!39;CL:0000211!9.86e-11!39;CL:0000117!1.08e-10!23;CL:0000337!1.08e-10!23;CL:0000055!1.42e-08!50
|ontology_enrichment_celltype=CL:0000540!3.80e-13!33;CL:0000047!3.80e-13!33;CL:0000031!3.80e-13!33;CL:0000404!3.80e-13!33;CL:0000221!7.69e-11!44;CL:0000133!7.69e-11!44;CL:0002319!9.19e-11!43;CL:0000393!9.86e-11!39;CL:0000211!9.86e-11!39;CL:0000117!1.08e-10!23;CL:0000337!1.08e-10!23;CL:0000055!1.42e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.89e-15,33;CL:0000047,1.89e-15,33;CL:0000031,1.89e-15,33;CL:0000404,1.89e-15,33;CL:0000117,3.92e-13,23;CL:0000337,3.92e-13,23;CL:0000393,5.05e-13,39;CL:0000211,5.05e-13,39;CL:0000221,2.46e-12,44;CL:0000133,2.46e-12,44;CL:0002319,3.12e-12,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.94e-25!75;UBERON:0001016!3.94e-25!75;UBERON:0004121!2.34e-24!102;UBERON:0000924!2.34e-24!102;UBERON:0006601!2.34e-24!102;UBERON:0001017!1.05e-23!73;UBERON:0005743!1.05e-23!73;UBERON:0002346!7.09e-21!71;UBERON:0003075!7.09e-21!71;UBERON:0007284!7.09e-21!71;UBERON:0001049!8.56e-19!52;UBERON:0005068!8.56e-19!52;UBERON:0006241!8.56e-19!52;UBERON:0007135!8.56e-19!52;UBERON:0000033!3.80e-18!63;UBERON:0003056!3.88e-17!49;UBERON:0000955!1.47e-16!50;UBERON:0006238!1.47e-16!50;UBERON:0002616!5.26e-16!49;UBERON:0002020!1.14e-15!34;UBERON:0003080!3.55e-14!40;UBERON:0002780!1.55e-13!39;UBERON:0001890!1.55e-13!39;UBERON:0006240!1.55e-13!39;UBERON:0002791!7.70e-13!29;UBERON:0003528!7.70e-13!29;UBERON:0001893!7.70e-13!29;UBERON:0000956!6.36e-10!21;UBERON:0001869!6.36e-10!21;UBERON:0000203!6.36e-10!21;UBERON:0002619!3.21e-08!17;UBERON:0002021!6.39e-08!10;UBERON:0000411!6.39e-08!10;UBERON:0001950!6.39e-08!10;UBERON:0000468!3.23e-07!333;UBERON:0007811!5.12e-07!86;UBERON:0000153!5.34e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.54e-28,95;UBERON:0000924,1.54e-28,95;UBERON:0006601,1.54e-28,95;UBERON:0001016,3.50e-28,75;UBERON:0001017,1.92e-26,73;UBERON:0002346,6.05e-26,64;UBERON:0003075,6.05e-26,64;UBERON:0007284,6.05e-26,64;UBERON:0010371,2.29e-23,73;UBERON:0000073,2.27e-21,54;UBERON:0001049,3.18e-21,52;UBERON:0005068,3.18e-21,52;UBERON:0006241,3.18e-21,52;UBERON:0007135,3.18e-21,52;UBERON:0002020,1.75e-19,34;UBERON:0003056,7.79e-19,49;UBERON:0000955,1.19e-17,47;UBERON:0006238,1.19e-17,47;UBERON:0002616,5.61e-17,46;UBERON:0003528,6.86e-16,29;UBERON:0002791,6.86e-16,29;UBERON:0001893,6.86e-16,29;UBERON:0003080,1.18e-15,40;UBERON:0002780,7.14e-15,39;UBERON:0001890,7.14e-15,39;UBERON:0006240,7.14e-15,39;UBERON:0010314,9.67e-13,92;UBERON:0000956,3.41e-12,21;UBERON:0001869,3.41e-12,21;UBERON:0000203,3.41e-12,21;UBERON:0002619,4.88e-10,17;UBERON:0002021,1.26e-09,10;UBERON:0000411,1.26e-09,10;UBERON:0001950,1.26e-09,10
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7697299954627,1.52065396829272,0,0,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,0,5.86717736492834,10.0508286061686,6.97214543856797,0,0,0,0,0,0.299600110518405,1.15265491596466,3.7328260431052,3.37514845829227,2.52389953621658,3.99911378165325,3.97563373712904,5.14461356702807,5.75072826109418,2.75765635983006,2.20231761998777,2.42605942361857,2.15049146558741,3.95658863190582,4.48289453651807,1.04182674111352,3.35019598801657,3.37657566019008,3.36156145108982,7.66034322231536,6.83384067835694,5.03278503728312,7.79979791331796,7.85944225110569,0,0,0,0,0,0,0.983110940922263,0,0,0,1.12674735821344,0,0,0,0,0,0,0.91347103775248,0.776813650941515,0.29688427812965,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0,0,0.722996784599558,0,0.161766849947409,0,0,1.86391761218122,29.5708604981663,45.8688287921467,0.255457055208591,0,0,0,8.08869452786043,3.20250421973039,4.27224797183739,18.0777292999968,16.8772201838018,5.61027720310812,6.16516799657479,1.62942982160506,0,0,1.68353484709179,0.520481771850815,1.37941262660084,3.06105620669094,3.61691562805716,5.3748834329549,6.02134485338794,4.68508622798644,3.3631438196072,0.215567992932842,0.567318240503458,0.351902248327898,0,0.834141747676794,0.696504333044333,3.49829631893504,0.796137067273973,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0.583826711835847,1.15191894939436,0.820837320395476,0.891756905004413,0.146199987425332,0,0,16.1923260394378,2.16099685996497,0,0,0.639864751605702,1.16118335930219,1.15980715189884,2.42020229548011,1.77902435075896,0.760902504450237,0.949058123089023,0.988193728344065,1.25667604400135,1.98956472041151,0.974820435595601,0,0.432276099749388,0.398282546508734,0.379335801906163,0.799739588268102,3.38123207019241,1.01825663922657,0,0.771494018793504,1.07502113111237,0.442830443938806,0.784993639206874,0.740382983530803,0,0,0.589676985339609,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0.714130922658041,0.195133647857799,0.315270288212382,0.44292937929755,0,0,0.172684981865896,0,0,0,0.491764273019036,0,4.17431533968259,2.93029216480508,0.163934945376675,0,2.83957397474631,1.17131623288992,4.73931475012158,1.91175038362042,3.7875774594007,3.67999490025482,3.23848561339915,2.33804686329049,1.97643888973262,4.81981974632711,1.56134093729095,2.67098405500883,3.90928702448583,3.79431282836832,0,1.21390318077491,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.775284879504663,0.727067458955011,1.06949213515416,0.316036757935816,0,0,3.74483566329167,0.540183282093931,0.258717367565509,1.28602221018955,0.354680467284547,1.07021290561242,1.48094118541909,0.608929898229199,0,0,0,0,9.52640117505843,3.37752379597673,0.835606408021955,0.656563598980245,0,5.19190845629427,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0.316335993581135,3.65975040828328,2.70013352054503,1.88179466413022,1.52853794622324,1.34864346384821,1.07449492442937,0.523511883968059,0.518459893167171,0,0,0.299033092087958,0,0.194451188344048,0.387479470433193,0.506868376472335,0.117357238645754,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,2.19781949120718,0.428736758158132,0,7.34177395402186,13.8097570952153,8.59343270159095,4.46818274093588,8.90607275701835,7.55393897389701,6.75022500231806,14.8605997063993,12.2348450425735,11.39072685854,0.93408612825759,6.3843979744165,3.92687293234509,3.16038732188782,1.04806581313991,1.65459157605013,3.33370091702423,1.85431551515005,2.56735367673452,3.28506375292937,5.57654459758527,1.88626341386076,3.37109426891577,3.07320731543373,2.98664438569189,2.38146845641537,1.73826488917283,0.964546102318525,3.29668720642645,2.20798380201596,2.74295401908332,2.66213709239006,2.14592570952589,2.47088908274958,2.54095327121393,2.11536519729191,2.74391959309159,2.89376682581627,3.25929873230068,3.92799590160417,2.60997039873183,2.26560309463796,3.6830793885272,2.94379998253335,2.89359916471712,2.99772693525535,3.04111090979031,3.00819475667618,0.765153328275374,0.882365676478062,0.695603506861264
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59233766815777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7697299954627,1.52065396829272,0,0,0.436050312760893,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0,0,5.86717736492834,10.0508286061686,6.97214543856797,0,0,0,0,0,0.299600110518405,1.15265491596466,3.7328260431052,3.37514845829227,2.52389953621658,3.99911378165325,3.97563373712904,5.14461356702807,5.75072826109418,2.75765635983006,2.20231761998777,2.42605942361857,2.15049146558741,3.95658863190582,4.48289453651807,1.04182674111352,3.35019598801657,3.37657566019008,3.36156145108982,7.66034322231536,6.83384067835694,5.03278503728312,7.79979791331796,7.85944225110569,0,0,0,0,0,0,0.983110940922263,0,0,0,1.12674735821344,0,0,0,0,0,0,0.91347103775248,0.776813650941515,0.29688427812965,0.520455980298408,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0,0,0.722996784599558,0,0.161766849947409,0,0,1.86391761218122,29.5708604981663,45.8688287921467,0.255457055208591,0,0,0,8.08869452786043,3.20250421973039,4.27224797183739,18.0777292999968,16.8772201838018,5.61027720310812,6.16516799657479,1.62942982160506,0,0,1.68353484709179,0.520481771850815,1.37941262660084,3.06105620669094,3.61691562805716,5.3748834329549,6.02134485338794,4.68508622798644,3.3631438196072,0.215567992932842,0.567318240503458,0.351902248327898,0,0.834141747676794,0.696504333044333,3.49829631893504,0.796137067273973,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.308534225774757,0,0.268273401399619,0.583826711835847,1.15191894939436,0.820837320395476,0.891756905004413,0.146199987425332,0,0,16.1923260394378,2.16099685996497,0,0,0.639864751605702,1.16118335930219,1.15980715189884,2.42020229548011,1.77902435075896,0.760902504450237,0.949058123089023,0.988193728344065,1.25667604400135,1.98956472041151,0.974820435595601,0,0.432276099749388,0.398282546508734,0.379335801906163,0.799739588268102,3.38123207019241,1.01825663922657,0,0.771494018793504,1.07502113111237,0.442830443938806,0.784993639206874,0.740382983530803,0,0,0.589676985339609,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0.714130922658041,0.195133647857799,0.315270288212382,0.44292937929755,0,0,0.172684981865896,0,0,0,0.491764273019036,0,4.17431533968259,2.93029216480508,0.163934945376675,0,2.83957397474631,1.17131623288992,4.73931475012158,1.91175038362042,3.7875774594007,3.67999490025482,3.23848561339915,2.33804686329049,1.97643888973262,4.81981974632711,1.56134093729095,2.67098405500883,3.90928702448583,3.79431282836832,0,1.21390318077491,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.775284879504663,0.727067458955011,1.06949213515416,0.316036757935816,0,0,3.74483566329167,0.540183282093931,0.258717367565509,1.28602221018955,0.354680467284547,1.07021290561242,1.48094118541909,0.608929898229199,0,0,0,0,9.52640117505843,3.37752379597673,0.835606408021955,0.656563598980245,0,5.19190845629427,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0.316335993581135,3.65975040828328,2.70013352054503,1.88179466413022,1.52853794622324,1.34864346384821,1.07449492442937,0.523511883968059,0.518459893167171,0,0,0.299033092087958,0,0.194451188344048,0.387479470433193,0.506868376472335,0.117357238645754,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,2.19781949120718,0.428736758158132,0,7.34177395402186,13.8097570952153,8.59343270159095,4.46818274093588,8.90607275701835,7.55393897389701,6.75022500231806,14.8605997063993,12.2348450425735,11.39072685854,0.93408612825759,6.3843979744165,3.92687293234509,3.16038732188782,1.04806581313991,1.65459157605013,3.33370091702423,1.85431551515005,2.56735367673452,3.28506375292937,5.57654459758527,1.88626341386076,3.37109426891577,3.07320731543373,2.98664438569189,2.38146845641537,1.73826488917283,0.964546102318525,3.29668720642645,2.20798380201596,2.74295401908332,2.66213709239006,2.14592570952589,2.47088908274958,2.54095327121393,2.11536519729191,2.74391959309159,2.89376682581627,3.25929873230068,3.92799590160417,2.60997039873183,2.26560309463796,3.6830793885272,2.94379998253335,2.89359916471712,2.99772693525535,3.04111090979031,3.00819475667618,0.765153328275374,0.882365676478062,0.695603506861264
|short_description=p1@Ndst3
|short_description=p1@Ndst3
}}
}}

Latest revision as of 13:38, 1 October 2015

Short description:p1@Ndst3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ndst3_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 16bp_to_ENSMUST00000154668_5end
EntrezGene:Ndst3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ndst3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.03
Mouse Schwann, donor1.CNhs12507.11728-123D97.80
Mouse Schwann, donor2.CNhs12573.11746-123F97.86
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B229.57
cerebellum, neonate N30.CNhs11135.1395-42I245.87
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.09
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D518.08
cortex, neonate N30.CNhs11107.1392-42F216.88
diencephalon, adult.CNhs10482.20-12F25.61
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C65.37
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G84.69
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E816.19
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.08
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G49.53
skin, neonate N03.CNhs11215.662-22H33.38
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.89e-1533
neuronal stem cell1.89e-1533
neuroblast1.89e-1533
electrically signaling cell1.89e-1533
CNS neuron (sensu Vertebrata)3.92e-1323
neuroblast (sensu Vertebrata)3.92e-1323
electrically responsive cell5.05e-1339
electrically active cell5.05e-1339
ectodermal cell2.46e-1244
neurectodermal cell2.46e-1244
neural cell3.12e-1243

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.54e-2895
ectoderm1.54e-2895
presumptive ectoderm1.54e-2895
nervous system3.50e-2875
central nervous system1.92e-2673
neurectoderm6.05e-2664
neural plate6.05e-2664
presumptive neural plate6.05e-2664
ecto-epithelium2.29e-2373
regional part of nervous system2.27e-2154
neural tube3.18e-2152
neural rod3.18e-2152
future spinal cord3.18e-2152
neural keel3.18e-2152
gray matter1.75e-1934
pre-chordal neural plate7.79e-1949
brain1.19e-1747
future brain1.19e-1747
regional part of brain5.61e-1746
brain grey matter6.86e-1629
regional part of telencephalon6.86e-1629
telencephalon6.86e-1629
anterior neural tube1.18e-1540
regional part of forebrain7.14e-1539
forebrain7.14e-1539
future forebrain7.14e-1539
structure with developmental contribution from neural crest9.67e-1392
cerebral cortex3.41e-1221
cerebral hemisphere3.41e-1221
pallium3.41e-1221
regional part of cerebral cortex4.88e-1017
occipital lobe1.26e-0910
visual cortex1.26e-0910
neocortex1.26e-0910
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