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FFCP PHASE1:Mm9::chr8:11728040..11728068,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54126
|EntrezGene=54126
|HGNC=
|HGNC=
|MCL_coexpression_id=2476
|TSSclassifier=NA
|UniProt=Q9ES28
|UniProt=Q9ES28
|association_with_transcript=-36bp_to_ENSMUST00000033908,ENSMUST00000110909,NM_001113517,uc009kvu.2,uc009kvv.2_5end
|association_with_transcript=-36bp_to_ENSMUST00000033908,ENSMUST00000110909,NM_001113517,uc009kvu.2,uc009kvv.2_5end
|cluster_id=chr8:11728040..11728068,+
|description=CAGE_peak_4_at_Arhgef7_5end
|description=CAGE_peak_4_at_Arhgef7_5end
|id=chr8:11728040..11728068,+
|id=chr8:11728040..11728068,+
|ontology_enrichment_celltype=CL:0000117!3.15e-10!23;CL:0000337!3.15e-10!23;CL:0000540!7.62e-10!33;CL:0000047!7.62e-10!33;CL:0000031!7.62e-10!33;CL:0000404!7.62e-10!33;CL:0000393!1.04e-07!39;CL:0000211!1.04e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.27e-11,23;CL:0000337,2.27e-11,23;CL:0000540,2.41e-10,33;CL:0000047,2.41e-10,33;CL:0000031,2.41e-10,33;CL:0000404,2.41e-10,33;CL:0000393,2.54e-08,39;CL:0000211,2.54e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!7.72e-16!114;UBERON:0004111!1.41e-13!122;UBERON:0000468!2.06e-11!333;UBERON:0001017!4.18e-11!73;UBERON:0005743!4.18e-11!73;UBERON:0002020!1.12e-10!34;UBERON:0000073!3.57e-10!75;UBERON:0001016!3.57e-10!75;UBERON:0001049!6.56e-10!52;UBERON:0005068!6.56e-10!52;UBERON:0006241!6.56e-10!52;UBERON:0007135!6.56e-10!52;UBERON:0002346!7.54e-10!71;UBERON:0003075!7.54e-10!71;UBERON:0007284!7.54e-10!71;UBERON:0003056!7.63e-10!49;UBERON:0004121!3.57e-09!102;UBERON:0000924!3.57e-09!102;UBERON:0006601!3.57e-09!102;UBERON:0002780!4.07e-09!39;UBERON:0001890!4.07e-09!39;UBERON:0006240!4.07e-09!39;UBERON:0003080!4.56e-09!40;UBERON:0000922!1.07e-08!328;UBERON:0000955!1.23e-08!50;UBERON:0006238!1.23e-08!50;UBERON:0002791!1.29e-08!29;UBERON:0003528!1.29e-08!29;UBERON:0001893!1.29e-08!29;UBERON:0000033!2.47e-08!63;UBERON:0002616!3.23e-08!49
|ontology_enrichment_uberon_v019_2=UBERON:0000025,2.48e-15,114;UBERON:0004111,1.04e-12,122;UBERON:0002020,2.65e-12,34;UBERON:0010314,4.33e-12,92;UBERON:0002346,8.44e-11,64;UBERON:0003075,8.44e-11,64;UBERON:0007284,8.44e-11,64;UBERON:0001017,1.31e-10,73;UBERON:0003056,1.66e-10,49;UBERON:0000073,1.83e-10,54;UBERON:0002780,4.23e-10,39;UBERON:0001890,4.23e-10,39;UBERON:0006240,4.23e-10,39;UBERON:0003080,4.82e-10,40;UBERON:0003528,5.97e-10,29;UBERON:0002791,5.97e-10,29;UBERON:0001893,5.97e-10,29;UBERON:0001049,6.00e-10,52;UBERON:0005068,6.00e-10,52;UBERON:0006241,6.00e-10,52;UBERON:0007135,6.00e-10,52;UBERON:0001016,8.65e-10,75;UBERON:0010371,5.93e-09,73;UBERON:0004121,7.43e-09,95;UBERON:0000924,7.43e-09,95;UBERON:0006601,7.43e-09,95;UBERON:0000955,7.95e-09,47;UBERON:0006238,7.95e-09,47;UBERON:0002616,2.33e-08,46;UBERON:0000956,6.28e-07,21;UBERON:0001869,6.28e-07,21;UBERON:0000203,6.28e-07,21;UBERON:0000922,8.84e-07,320
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0.771778308107841,1.71920063963254,3.6097046459421,10.7227724255587,7.93486468908049,12.6766280701236,0,0,0,0,0,0.599200221036809,0.768436610643109,6.53244557543409,9.04539786822327,8.2026734927039,3.14216082844184,2.87129103237098,12.6165523191403,13.7059023556078,15.6267193723704,1.10115880999389,1.27687338085188,2.15049146558741,9.49581271657396,10.8870295886867,7.29278718779464,1.95428099300967,1.12552522006336,2.13917546887534,6.18720029494702,4.9830088279686,6.71038004971082,0,0.151143120213571,0.579728977403356,0,2.719885334831,1.07940638327563,3.24888208723835,1.79210754838934,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.693941307064543,0.913396434936424,0.922461989024234,0.904335843315735,1.05829836422134,0.376999773989026,1.48316980640624,0.578397427679647,0,2.26473589926373,0.220841518460394,0,0,0.878342391034642,1.04723353406728,0.255457055208591,0,0,0,1.3481157546434,4.11750542536764,14.5759048450923,2.9550134432687,3.58001640262463,3.53239675751252,3.40706652442291,1.12023300235348,0.622034853050465,0,0.210441855886474,2.21204753036596,3.90833577536904,2.16074555766419,2.26057226753573,2.65342346690179,2.562274405697,3.74806898238915,0.776110112217047,3.88022387279116,5.48407632486676,4.57472922826267,3.72632745126877,1.66828349535359,3.1342694986995,3.08673204611915,0.199034266818493,0,0,0,4.14251545071004,3.04883877975425,4.14142741360334,5.68187365404505,2.75469924446365,4.47374627373397,4.41814495025775,8.58474884478781,3.85325629811659,4.93679549740441,3.11918181750281,2.10778904819225,2.04679982395465,3.07370161407471,2.01309628140558,3.57492912559016,3.49875682089567,0,0.264450566663544,1.06644125267617,1.16118335930219,1.41754207454303,0.605050573870028,0,0.570676878337677,0,0.329397909448022,1.50801125280162,0.198956472041151,1.16978452271472,0.898819408654221,0.432276099749388,0.199141273254367,0,0.571242563048644,1.1270773567308,0.610953983535943,0.775809948670503,0.420814919341911,1.39120381673366,2.95220295959204,2.66897837330337,2.22114895059241,1.48226313543574,1.33476084572875,1.37591296579242,0.899448449539415,0.811440485554012,1.92941727801933,2.5462585178142,3.74004978686054,2.59416362840057,1.37280706594041,5.75072826109418,2.23284568601102,1.24815069245824,2.02063102357689,3.58794827043824,3.37710464954357,0.739012760666419,1.32643988239339,1.62964976442026,0.509235257325564,1.64283173801951,1.00503754465089,2.85652369063216,4.09780660501378,6.62067605246002,4.20782910332672,5.74037167166954,0.491589944147214,1.72684981865896,2.60368305446721,0,0,0,0.275936746304732,1.28440471990234,1.99259867206745,0,0.757412781613119,2.83957397474631,0.390438744296638,4.09304455692318,1.19484398976276,1.78238939265915,1.41538265394416,1.21443210502468,1.46127928955656,4.34816555741176,4.81981974632711,0.851640511249612,1.78065603667255,0.651547837414304,1.15479086080775,0,0.971122544619926,0.906970670894253,1.50884063804718,3.54362271456927,0.922305443831782,0.775284879504663,0.727067458955011,1.06949213515416,0.948110273807448,1.05418608574999,0,1.02131881726136,1.62054984628179,1.68166288917581,3.21505552547388,2.12808280370728,1.60531935841864,0.822745103010605,1.522324745573,1.17335854031855,0.63549621259146,0,0.98931751764888,5.00539722757307,2.95533332147964,1.07435109602823,0.656563598980245,0,0.741701208042039,0,0.412773735926445,0.185194527369712,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0.138199973804424,0,2.21435195506795,1.21991680276109,0.108005340821801,0.418176592028937,0.218362563746178,0.809186078308924,0.495920734352016,0.523511883968059,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0.583353565032143,0.387479470433193,0.506868376472335,0.821500670520278,0.2604087696879,0.629156066554265,0,0.288030006257865,0,0.202725215290164,0.410843828659309,0.25984164595559,0.537080087002444,0.198681354781265,0,0.147689527174577,0,0.228620419965,0.100826185136841,0,0.192423683280659,0.116876902181569,0.453460767230423,2.66383144048878,10.5862350799181,7.55480773638353,1.54551675225752,0,0.183151624267265,0.643105137237198,0,3.95326289831947,2.76195141904306,6.87474616127276,4.64003592327956,4.7955776383945,0,2.02506750069542,2.2516060161211,3.62513927187364,2.5888015587591,3.84013186061454,2.79317411380722,3.75613932659095,5.10524105843418,3.35381060204772,2.75765262675021,4.66718128383392,5.56294654545014,6.73930340142812,5.05394423527595,3.54871019846336,3.01802146217722,3.27745276144588,3.64943368707755,2.98664438569189,4.28664322154766,3.70829843023538,2.50781986602817,6.1812885120496,2.64958056241915,5.48590803816665,2.48466128623072,3.09967046931517,3.63366041580821,4.04670335785922,3.9768865709088,2.37806364734604,1.8414879800649,2.71608227691724,1.68342681497322,4.03359061622192,3.25064791839359,3.27384834535751,2.47898945897546,3.08650577569826,5.49583271463481,3.74290573512653,2.36358159453128,1.91288332068843,0.882365676478062,2.55054619182464
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0.771778308107841,1.71920063963254,3.6097046459421,10.7227724255587,7.93486468908049,12.6766280701236,0,0,0,0,0,0.599200221036809,0.768436610643109,6.53244557543409,9.04539786822327,8.2026734927039,3.14216082844184,2.87129103237098,12.6165523191403,13.7059023556078,15.6267193723704,1.10115880999389,1.27687338085188,2.15049146558741,9.49581271657396,10.8870295886867,7.29278718779464,1.95428099300967,1.12552522006336,2.13917546887534,6.18720029494702,4.9830088279686,6.71038004971082,0,0.151143120213571,0.579728977403356,0,2.719885334831,1.07940638327563,3.24888208723835,1.79210754838934,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.693941307064543,0.913396434936424,0.922461989024234,0.904335843315735,1.05829836422134,0.376999773989026,1.48316980640624,0.578397427679647,0,2.26473589926373,0.220841518460394,0,0,0.878342391034642,1.04723353406728,0.255457055208591,0,0,0,1.3481157546434,4.11750542536764,14.5759048450923,2.9550134432687,3.58001640262463,3.53239675751252,3.40706652442291,1.12023300235348,0.622034853050465,0,0.210441855886474,2.21204753036596,3.90833577536904,2.16074555766419,2.26057226753573,2.65342346690179,2.562274405697,3.74806898238915,0.776110112217047,3.88022387279116,5.48407632486676,4.57472922826267,3.72632745126877,1.66828349535359,3.1342694986995,3.08673204611915,0.199034266818493,0,0,0,4.14251545071004,3.04883877975425,4.14142741360334,5.68187365404505,2.75469924446365,4.47374627373397,4.41814495025775,8.58474884478781,3.85325629811659,4.93679549740441,3.11918181750281,2.10778904819225,2.04679982395465,3.07370161407471,2.01309628140558,3.57492912559016,3.49875682089567,0,0.264450566663544,1.06644125267617,1.16118335930219,1.41754207454303,0.605050573870028,0,0.570676878337677,0,0.329397909448022,1.50801125280162,0.198956472041151,1.16978452271472,0.898819408654221,0.432276099749388,0.199141273254367,0,0.571242563048644,1.1270773567308,0.610953983535943,0.775809948670503,0.420814919341911,1.39120381673366,2.95220295959204,2.66897837330337,2.22114895059241,1.48226313543574,1.33476084572875,1.37591296579242,0.899448449539415,0.811440485554012,1.92941727801933,2.5462585178142,3.74004978686054,2.59416362840057,1.37280706594041,5.75072826109418,2.23284568601102,1.24815069245824,2.02063102357689,3.58794827043824,3.37710464954357,0.739012760666419,1.32643988239339,1.62964976442026,0.509235257325564,1.64283173801951,1.00503754465089,2.85652369063216,4.09780660501378,6.62067605246002,4.20782910332672,5.74037167166954,0.491589944147214,1.72684981865896,2.60368305446721,0,0,0,0.275936746304732,1.28440471990234,1.99259867206745,0,0.757412781613119,2.83957397474631,0.390438744296638,4.09304455692318,1.19484398976276,1.78238939265915,1.41538265394416,1.21443210502468,1.46127928955656,4.34816555741176,4.81981974632711,0.851640511249612,1.78065603667255,0.651547837414304,1.15479086080775,0,0.971122544619926,0.906970670894253,1.50884063804718,3.54362271456927,0.922305443831782,0.775284879504663,0.727067458955011,1.06949213515416,0.948110273807448,1.05418608574999,0,1.02131881726136,1.62054984628179,1.68166288917581,3.21505552547388,2.12808280370728,1.60531935841864,0.822745103010605,1.522324745573,1.17335854031855,0.63549621259146,0,0.98931751764888,5.00539722757307,2.95533332147964,1.07435109602823,0.656563598980245,0,0.741701208042039,0,0.412773735926445,0.185194527369712,0.188368457004691,0.546776910884101,0.228778173206523,0,0,0.138199973804424,0,2.21435195506795,1.21991680276109,0.108005340821801,0.418176592028937,0.218362563746178,0.809186078308924,0.495920734352016,0.523511883968059,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0.583353565032143,0.387479470433193,0.506868376472335,0.821500670520278,0.2604087696879,0.629156066554265,0,0.288030006257865,0,0.202725215290164,0.410843828659309,0.25984164595559,0.537080087002444,0.198681354781265,0,0.147689527174577,0,0.228620419965,0.100826185136841,0,0.192423683280659,0.116876902181569,0.453460767230423,2.66383144048878,10.5862350799181,7.55480773638353,1.54551675225752,0,0.183151624267265,0.643105137237198,0,3.95326289831947,2.76195141904306,6.87474616127276,4.64003592327956,4.7955776383945,0,2.02506750069542,2.2516060161211,3.62513927187364,2.5888015587591,3.84013186061454,2.79317411380722,3.75613932659095,5.10524105843418,3.35381060204772,2.75765262675021,4.66718128383392,5.56294654545014,6.73930340142812,5.05394423527595,3.54871019846336,3.01802146217722,3.27745276144588,3.64943368707755,2.98664438569189,4.28664322154766,3.70829843023538,2.50781986602817,6.1812885120496,2.64958056241915,5.48590803816665,2.48466128623072,3.09967046931517,3.63366041580821,4.04670335785922,3.9768865709088,2.37806364734604,1.8414879800649,2.71608227691724,1.68342681497322,4.03359061622192,3.25064791839359,3.27384834535751,2.47898945897546,3.08650577569826,5.49583271463481,3.74290573512653,2.36358159453128,1.91288332068843,0.882365676478062,2.55054619182464
|short_description=p4@Arhgef7
|short_description=p4@Arhgef7
}}
}}

Latest revision as of 13:40, 1 October 2015

Short description:p4@Arhgef7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Arhgef7_5end
Coexpression cluster:MCL_coexpression_mm9:2476
Association with transcript: -36bp_to_ENSMUST00000033908, ENSMUST00000110909, NM_001113517, uc009kvu.2, uc009kvv.2_5end
EntrezGene:Arhgef7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Arhgef7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D98.20
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.71
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.50
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.89
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F114.58
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.65
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G83.75
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H25.48
forelimb, embryo E13.CNhs10589.384-1E24.57
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I94.14
heart, embryo E14.CNhs10597.403-26D45.68
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G38.58
heart, neonate N00.CNhs11213.639-21E33.85
heart, neonate N03.CNhs11221.1349-25I24.94
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G12.11
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C64.10
lung, neonate N06.CNhs11212.683-20E56.62
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E65.74
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.60
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.28
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I94.82
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H32.96
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.59
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.55
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.27e-1123
neuroblast (sensu Vertebrata)2.27e-1123
neuron2.41e-1033
neuronal stem cell2.41e-1033
neuroblast2.41e-1033
electrically signaling cell2.41e-1033
electrically responsive cell2.54e-0839
electrically active cell2.54e-0839

Uber anatomy
Ontology termp-valuen
tube2.48e-15114
anatomical conduit1.04e-12122
gray matter2.65e-1234
structure with developmental contribution from neural crest4.33e-1292
neurectoderm8.44e-1164
neural plate8.44e-1164
presumptive neural plate8.44e-1164
central nervous system1.31e-1073
pre-chordal neural plate1.66e-1049
regional part of nervous system1.83e-1054
regional part of forebrain4.23e-1039
forebrain4.23e-1039
future forebrain4.23e-1039
anterior neural tube4.82e-1040
brain grey matter5.97e-1029
regional part of telencephalon5.97e-1029
telencephalon5.97e-1029
neural tube6.00e-1052
neural rod6.00e-1052
future spinal cord6.00e-1052
neural keel6.00e-1052
nervous system8.65e-1075
ecto-epithelium5.93e-0973
ectoderm-derived structure7.43e-0995
ectoderm7.43e-0995
presumptive ectoderm7.43e-0995
brain7.95e-0947
future brain7.95e-0947
regional part of brain2.33e-0846
cerebral cortex6.28e-0721
cerebral hemisphere6.28e-0721
pallium6.28e-0721
embryo8.84e-07320
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