FFCP PHASE1:Mm9::chrX:131745211..131745239,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=66104|HGNC=|MCL_coexpression_id=1|UniProt=Q9DB24,Q14C38|association_with_transcript=0bp_to_ENSMUST00000033783,NM_025355,uc009uhc.2_5end|description=CAGE_peak_2_at_Tceal6_5end|id=chrX:131745211..131745239,-|ontology_enrichment_celltype=CL:0000117!4.20e-13!23;CL:0000337!4.20e-13!23;CL:0000540!3.20e-12!33;CL:0000047!3.20e-12!33;CL:0000031!3.20e-12!33;CL:0000404!3.20e-12!33;CL:0000393!3.92e-08!39;CL:0000211!3.92e-08!39;CL:0000221!7.01e-08!44;CL:0000133!7.01e-08!44;CL:0002319!1.07e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.30e-17,23;CL:0000337,4.30e-17,23;CL:0000540,6.79e-12,33;CL:0000047,6.79e-12,33;CL:0000031,6.79e-12,33;CL:0000404,6.79e-12,33;CL:0000393,9.95e-09,39;CL:0000211,9.95e-09,39;CL:0000221,2.14e-07,44;CL:0000133,2.14e-07,44;CL:0002319,3.63e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.82e-25!71;UBERON:0003075!7.82e-25!71;UBERON:0007284!7.82e-25!71;UBERON:0001017!9.20e-25!73;UBERON:0005743!9.20e-25!73;UBERON:0000073!2.73e-24!75;UBERON:0001016!2.73e-24!75;UBERON:0001049!8.17e-24!52;UBERON:0005068!8.17e-24!52;UBERON:0006241!8.17e-24!52;UBERON:0007135!8.17e-24!52;UBERON:0000033!4.29e-23!63;UBERON:0000955!8.69e-23!50;UBERON:0006238!8.69e-23!50;UBERON:0004121!3.22e-22!102;UBERON:0000924!3.22e-22!102;UBERON:0006601!3.22e-22!102;UBERON:0002616!5.31e-22!49;UBERON:0003056!7.45e-21!49;UBERON:0003080!3.80e-19!40;UBERON:0002020!6.17e-19!34;UBERON:0002780!2.27e-18!39;UBERON:0001890!2.27e-18!39;UBERON:0006240!2.27e-18!39;UBERON:0002791!5.66e-16!29;UBERON:0003528!5.66e-16!29;UBERON:0001893!5.66e-16!29;UBERON:0000956!6.51e-11!21;UBERON:0001869!6.51e-11!21;UBERON:0000203!6.51e-11!21;UBERON:0000153!9.93e-11!94;UBERON:0007811!3.48e-10!86;UBERON:0002619!1.50e-09!17;UBERON:0002021!1.20e-07!10;UBERON:0000411!1.20e-07!10;UBERON:0001950!1.20e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.95e-30,54;UBERON:0002346,2.03e-28,64;UBERON:0003075,2.03e-28,64;UBERON:0007284,2.03e-28,64;UBERON:0001049,2.33e-28,52;UBERON:0005068,2.33e-28,52;UBERON:0006241,2.33e-28,52;UBERON:0007135,2.33e-28,52;UBERON:0001017,5.34e-27,73;UBERON:0001016,1.03e-25,75;UBERON:0000955,2.80e-24,47;UBERON:0006238,2.80e-24,47;UBERON:0002020,1.14e-23,34;UBERON:0010371,2.41e-23,73;UBERON:0002616,2.80e-23,46;UBERON:0004121,9.37e-23,95;UBERON:0000924,9.37e-23,95;UBERON:0006601,9.37e-23,95;UBERON:0003056,1.28e-22,49;UBERON:0003080,2.12e-21,40;UBERON:0002780,2.11e-20,39;UBERON:0001890,2.11e-20,39;UBERON:0006240,2.11e-20,39;UBERON:0003528,1.05e-19,29;UBERON:0002791,1.05e-19,29;UBERON:0001893,1.05e-19,29;UBERON:0010314,3.39e-15,92;UBERON:0000956,5.67e-13,21;UBERON:0001869,5.67e-13,21;UBERON:0000203,5.67e-13,21;UBERON:0002619,4.04e-11,17;UBERON:0002021,9.31e-10,10;UBERON:0000411,9.31e-10,10;UBERON:0001950,9.31e-10,10;UBERON:0002420,4.60e-08,8;UBERON:0007245,4.60e-08,8;UBERON:0010009,4.60e-08,8;UBERON:0010011,4.60e-08,8;UBERON:0000454,4.60e-08,8;UBERON:0003076,2.16e-07,12;UBERON:0003057,2.16e-07,12|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,12.1389876515759,15.340738398889,10.1413024560989,0,0,0,0,0,0,0,1.55534418462716,2.56511282830212,3.78584930432488,15.1395021734016,15.6816664075646,8.20688354740192,5.94241920313065,10.1114066527102,19.82085857989,25.4097802789524,29.4924543851987,10.8146755938759,15.4614117688072,11.4600941522487,22.8930059181132,26.449842671489,29.795658316478,19.7401152267357,20.9286370774681,18.0807462450542,0.151452386666368,0.226714680320357,0,0,0,0,0,0,1.12355536105401,0,0,0,1.54927761754349,0,0,0,0,0,0,1.02765491747154,0,1.33597925158342,0.173485326766136,0.913396434936424,0.230615497256059,0.753613202763113,0.587943535678524,0.376999773989026,0,1.44599356919912,0,0.808834249737046,0.220841518460394,0,0,23.7152445579353,15.9179497178226,0,0,0,0,43.2894947879938,52.1550687213234,31.539242380329,49.8875798951833,36.5673103982373,37.1940599761613,33.2594589288903,0.509196819251581,0.248813941220186,0,2.94618598241064,0.260240885925407,0.459804208866946,3.42118046630164,2.56198190320716,2.10913147369116,3.45907044769094,2.24884138943349,6.72628763921441,0,2.08016688184601,1.58356011747554,2.41115305670332,1.39023624612799,2.43776516565517,1.64625709126355,1.39323986772945,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0,0.196764231747404,0.462801338662135,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,59.3017654950839,19.2431625149262,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0,0.658795818896044,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.947457058852424,0.325929952884052,0.678980343100753,0.704070744865506,0,0,0,0.315270288212382,0.221464689648775,0,0,0.345369963731791,0.289298117163023,0,0,0,0,38.3715910070823,33.1709073055935,0,0,0.94652465824877,0,1.29254038639679,0.955875191810208,0.891194696329576,0.283076530788832,0.404810701674894,2.33804686329049,2.37172666767914,37.2732727049296,1.13552068166615,0.534196811001766,0,0,0,0.485561272309963,0,0,0.590603785761546,0,0,0,0,0,0,0,7.14923172082955,0.900305470156551,0.517434735131018,0.643011105094777,1.06404140185364,1.42695054081656,2.13913726782757,3.34911444026059,0,0,0.220528398054962,0,0.645857706783622,0.301564624640779,0,0.164140899745061,0,36.7142097980809,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.813277868507395,0.216010681643603,0.209088296014469,0.436725127492355,0.809186078308924,0.909188012978695,0.26175594198403,0.388844919875379,0,0,1.64468200648377,0.992750942742586,1.16670713006429,0.774958940866387,0.337912250981556,0.704143431874524,0.2604087696879,3.25063967719704,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0,0.501572104035363,22.5900737046827,23.9369122983732,25.7802981047728,21.997207339992,22.6077231524312,22.661816921691,18.2256075062588,26.568950990229,29.4542565839733,23.8169743405837,1.55681021376265,3.19219898720825,3.58540572083682,4.86213434136588,5.65955539095552,5.33146174505041,2.889207461421,4.12070114477788,6.4183841918363,4.29585259998456,4.30914809813408,3.9611531691076,4.30750934361459,4.60981097315059,4.53740204749345,7.1444053692461,3.70829843023538,2.31491064556446,3.29668720642645,3.82717192349433,6.85738504770831,3.90446773550542,5.48403236878838,4.0696996657052,3.76437521661322,4.99226186560891,5.12198324043763,4.47218509444333,5.29636043998861,3.36685362994643,3.08451047122853,4.43270170690036,4.50154147486658,3.71848418846318,3.08650577569826,5.74564329257276,3.50897412668113,3.65280791882107,2.48674831689496,1.32354851471709,0.927471342481686|short_description=p2@Tceal6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66104 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DB24,Q14C38 | |||
|association_with_transcript=0bp_to_ENSMUST00000033783,NM_025355,uc009uhc.2_5end | |||
|cluster_id=chrX:131745211..131745239,- | |||
|description=CAGE_peak_2_at_Tceal6_5end | |||
|id=chrX:131745211..131745239,- | |||
|ontology_enrichment_celltype=CL:0000117!4.20e-13!23;CL:0000337!4.20e-13!23;CL:0000540!3.20e-12!33;CL:0000047!3.20e-12!33;CL:0000031!3.20e-12!33;CL:0000404!3.20e-12!33;CL:0000393!3.92e-08!39;CL:0000211!3.92e-08!39;CL:0000221!7.01e-08!44;CL:0000133!7.01e-08!44;CL:0002319!1.07e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.30e-17,23;CL:0000337,4.30e-17,23;CL:0000540,6.79e-12,33;CL:0000047,6.79e-12,33;CL:0000031,6.79e-12,33;CL:0000404,6.79e-12,33;CL:0000393,9.95e-09,39;CL:0000211,9.95e-09,39;CL:0000221,2.14e-07,44;CL:0000133,2.14e-07,44;CL:0002319,3.63e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.82e-25!71;UBERON:0003075!7.82e-25!71;UBERON:0007284!7.82e-25!71;UBERON:0001017!9.20e-25!73;UBERON:0005743!9.20e-25!73;UBERON:0000073!2.73e-24!75;UBERON:0001016!2.73e-24!75;UBERON:0001049!8.17e-24!52;UBERON:0005068!8.17e-24!52;UBERON:0006241!8.17e-24!52;UBERON:0007135!8.17e-24!52;UBERON:0000033!4.29e-23!63;UBERON:0000955!8.69e-23!50;UBERON:0006238!8.69e-23!50;UBERON:0004121!3.22e-22!102;UBERON:0000924!3.22e-22!102;UBERON:0006601!3.22e-22!102;UBERON:0002616!5.31e-22!49;UBERON:0003056!7.45e-21!49;UBERON:0003080!3.80e-19!40;UBERON:0002020!6.17e-19!34;UBERON:0002780!2.27e-18!39;UBERON:0001890!2.27e-18!39;UBERON:0006240!2.27e-18!39;UBERON:0002791!5.66e-16!29;UBERON:0003528!5.66e-16!29;UBERON:0001893!5.66e-16!29;UBERON:0000956!6.51e-11!21;UBERON:0001869!6.51e-11!21;UBERON:0000203!6.51e-11!21;UBERON:0000153!9.93e-11!94;UBERON:0007811!3.48e-10!86;UBERON:0002619!1.50e-09!17;UBERON:0002021!1.20e-07!10;UBERON:0000411!1.20e-07!10;UBERON:0001950!1.20e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.95e-30,54;UBERON:0002346,2.03e-28,64;UBERON:0003075,2.03e-28,64;UBERON:0007284,2.03e-28,64;UBERON:0001049,2.33e-28,52;UBERON:0005068,2.33e-28,52;UBERON:0006241,2.33e-28,52;UBERON:0007135,2.33e-28,52;UBERON:0001017,5.34e-27,73;UBERON:0001016,1.03e-25,75;UBERON:0000955,2.80e-24,47;UBERON:0006238,2.80e-24,47;UBERON:0002020,1.14e-23,34;UBERON:0010371,2.41e-23,73;UBERON:0002616,2.80e-23,46;UBERON:0004121,9.37e-23,95;UBERON:0000924,9.37e-23,95;UBERON:0006601,9.37e-23,95;UBERON:0003056,1.28e-22,49;UBERON:0003080,2.12e-21,40;UBERON:0002780,2.11e-20,39;UBERON:0001890,2.11e-20,39;UBERON:0006240,2.11e-20,39;UBERON:0003528,1.05e-19,29;UBERON:0002791,1.05e-19,29;UBERON:0001893,1.05e-19,29;UBERON:0010314,3.39e-15,92;UBERON:0000956,5.67e-13,21;UBERON:0001869,5.67e-13,21;UBERON:0000203,5.67e-13,21;UBERON:0002619,4.04e-11,17;UBERON:0002021,9.31e-10,10;UBERON:0000411,9.31e-10,10;UBERON:0001950,9.31e-10,10;UBERON:0002420,4.60e-08,8;UBERON:0007245,4.60e-08,8;UBERON:0010009,4.60e-08,8;UBERON:0010011,4.60e-08,8;UBERON:0000454,4.60e-08,8;UBERON:0003076,2.16e-07,12;UBERON:0003057,2.16e-07,12 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03807360072595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,12.1389876515759,15.340738398889,10.1413024560989,0,0,0,0,0,0,0,1.55534418462716,2.56511282830212,3.78584930432488,15.1395021734016,15.6816664075646,8.20688354740192,5.94241920313065,10.1114066527102,19.82085857989,25.4097802789524,29.4924543851987,10.8146755938759,15.4614117688072,11.4600941522487,22.8930059181132,26.449842671489,29.795658316478,19.7401152267357,20.9286370774681,18.0807462450542,0.151452386666368,0.226714680320357,0,0,0,0,0,0,1.12355536105401,0,0,0,1.54927761754349,0,0,0,0,0,0,1.02765491747154,0,1.33597925158342,0.173485326766136,0.913396434936424,0.230615497256059,0.753613202763113,0.587943535678524,0.376999773989026,0,1.44599356919912,0,0.808834249737046,0.220841518460394,0,0,23.7152445579353,15.9179497178226,0,0,0,0,43.2894947879938,52.1550687213234,31.539242380329,49.8875798951833,36.5673103982373,37.1940599761613,33.2594589288903,0.509196819251581,0.248813941220186,0,2.94618598241064,0.260240885925407,0.459804208866946,3.42118046630164,2.56198190320716,2.10913147369116,3.45907044769094,2.24884138943349,6.72628763921441,0,2.08016688184601,1.58356011747554,2.41115305670332,1.39023624612799,2.43776516565517,1.64625709126355,1.39323986772945,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0,0.196764231747404,0.462801338662135,0,0.268273401399619,0,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,59.3017654950839,19.2431625149262,0,0,0.639864751605702,0,0.128867461322093,0.201683524623343,0.22237804384487,0.380451252225118,0,0.658795818896044,0.502670417600539,0.198956472041151,0.779856348476481,0.898819408654221,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0.947457058852424,0.325929952884052,0.678980343100753,0.704070744865506,0,0,0,0.315270288212382,0.221464689648775,0,0,0.345369963731791,0.289298117163023,0,0,0,0,38.3715910070823,33.1709073055935,0,0,0.94652465824877,0,1.29254038639679,0.955875191810208,0.891194696329576,0.283076530788832,0.404810701674894,2.33804686329049,2.37172666767914,37.2732727049296,1.13552068166615,0.534196811001766,0,0,0,0.485561272309963,0,0,0.590603785761546,0,0,0,0,0,0,0,7.14923172082955,0.900305470156551,0.517434735131018,0.643011105094777,1.06404140185364,1.42695054081656,2.13913726782757,3.34911444026059,0,0,0.220528398054962,0,0.645857706783622,0.301564624640779,0,0.164140899745061,0,36.7142097980809,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.813277868507395,0.216010681643603,0.209088296014469,0.436725127492355,0.809186078308924,0.909188012978695,0.26175594198403,0.388844919875379,0,0,1.64468200648377,0.992750942742586,1.16670713006429,0.774958940866387,0.337912250981556,0.704143431874524,0.2604087696879,3.25063967719704,0.483168241652012,0.288030006257865,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.549454872801795,0,0.501572104035363,22.5900737046827,23.9369122983732,25.7802981047728,21.997207339992,22.6077231524312,22.661816921691,18.2256075062588,26.568950990229,29.4542565839733,23.8169743405837,1.55681021376265,3.19219898720825,3.58540572083682,4.86213434136588,5.65955539095552,5.33146174505041,2.889207461421,4.12070114477788,6.4183841918363,4.29585259998456,4.30914809813408,3.9611531691076,4.30750934361459,4.60981097315059,4.53740204749345,7.1444053692461,3.70829843023538,2.31491064556446,3.29668720642645,3.82717192349433,6.85738504770831,3.90446773550542,5.48403236878838,4.0696996657052,3.76437521661322,4.99226186560891,5.12198324043763,4.47218509444333,5.29636043998861,3.36685362994643,3.08451047122853,4.43270170690036,4.50154147486658,3.71848418846318,3.08650577569826,5.74564329257276,3.50897412668113,3.65280791882107,2.48674831689496,1.32354851471709,0.927471342481686 | |||
|short_description=p2@Tceal6 | |||
}} |
Latest revision as of 14:25, 1 October 2015
Short description: | p2@Tceal6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tceal6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000033783, NM_025355, uc009uhc.2_5end |
EntrezGene: | Tceal6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.30e-17 | 23 |
neuroblast (sensu Vertebrata) | 4.30e-17 | 23 |
neuron | 6.79e-12 | 33 |
neuronal stem cell | 6.79e-12 | 33 |
neuroblast | 6.79e-12 | 33 |
electrically signaling cell | 6.79e-12 | 33 |
electrically responsive cell | 9.95e-09 | 39 |
electrically active cell | 9.95e-09 | 39 |
ectodermal cell | 2.14e-07 | 44 |
neurectodermal cell | 2.14e-07 | 44 |
neural cell | 3.63e-07 | 43 |