FFCP PHASE1:Mm9::chr6:71149865..71149882,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:71149865..71149882,+
|short_description=p1@Fabp1
|description=CAGE_peak_1_at_Fabp1_5end
|association_with_transcript=0bp_to_NM_017399,uc009cgh.1_5end
|Ent...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14080 | |EntrezGene=14080 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=207 | |||
|TSSclassifier=NA | |||
|UniProt=P12710,Q3V2F7 | |UniProt=P12710,Q3V2F7 | ||
|association_with_transcript=0bp_to_NM_017399,uc009cgh.1_5end | |||
|cluster_id=chr6:71149865..71149882,+ | |||
|description=CAGE_peak_1_at_Fabp1_5end | |||
|id=chr6:71149865..71149882,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.63e-18!128;UBERON:0001555!1.63e-18!128;UBERON:0007026!1.63e-18!128;UBERON:0004119!4.13e-18!130;UBERON:0000925!4.13e-18!130;UBERON:0006595!4.13e-18!130;UBERON:0004921!2.30e-17!126;UBERON:0004185!2.30e-17!126;UBERON:0005409!2.22e-16!59;UBERON:0000160!1.74e-14!43;UBERON:0009854!1.58e-12!23;UBERON:0009856!1.58e-12!23;UBERON:0002107!2.30e-12!22;UBERON:0007499!2.30e-12!22;UBERON:0006925!2.30e-12!22;UBERON:0009497!2.30e-12!22;UBERON:0000015!2.30e-12!22;UBERON:0002423!2.30e-12!22;UBERON:0006235!2.30e-12!22;UBERON:0008835!2.30e-12!22;UBERON:0003894!2.30e-12!22;UBERON:0004161!2.30e-12!22;UBERON:0008836!2.30e-12!22;UBERON:0005172!1.77e-10!49;UBERON:0005173!1.77e-10!49;UBERON:0002417!1.77e-10!49;UBERON:0000916!1.77e-10!49;UBERON:0002365!4.92e-10!25;UBERON:0002330!4.92e-10!25;UBERON:0009569!3.31e-09!66;UBERON:0000344!1.08e-08!15;UBERON:0005177!1.61e-08!85;UBERON:0001242!1.61e-07!13;UBERON:0000060!1.61e-07!13;UBERON:0001262!1.61e-07!13;UBERON:0004786!1.61e-07!13;UBERON:0005911!2.12e-07!69;UBERON:0003929!6.90e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.51e-17,31;UBERON:0005409,3.10e-16,47;UBERON:0001007,6.80e-16,116;UBERON:0001555,6.80e-16,116;UBERON:0007026,6.80e-16,116;UBERON:0004119,1.40e-15,118;UBERON:0000925,1.40e-15,118;UBERON:0006595,1.40e-15,118;UBERON:0004921,9.42e-15,114;UBERON:0009854,7.36e-14,23;UBERON:0009856,7.36e-14,23;UBERON:0002107,1.12e-13,22;UBERON:0007499,1.12e-13,22;UBERON:0006925,1.12e-13,22;UBERON:0009497,1.12e-13,22;UBERON:0000015,1.12e-13,22;UBERON:0002423,1.12e-13,22;UBERON:0006235,1.12e-13,22;UBERON:0008835,1.12e-13,22;UBERON:0003894,1.12e-13,22;UBERON:0004161,1.12e-13,22;UBERON:0008836,1.12e-13,22;UBERON:0002365,7.92e-11,25;UBERON:0002330,7.92e-11,25;UBERON:0005172,1.36e-09,49;UBERON:0005173,1.36e-09,49;UBERON:0002417,1.36e-09,49;UBERON:0000916,1.36e-09,49;UBERON:0000344,1.47e-09,15;UBERON:0005177,9.01e-09,79;UBERON:0001242,3.01e-08,13;UBERON:0001262,3.01e-08,13;UBERON:0004786,3.01e-08,13;UBERON:0009569,6.16e-08,66 | |||
|phase1_expression=0,11323.554027082,8393.37096901877,7478.42762456137,6304.27365710473,1750.64504749719,1608.89025578139,0,0,0,0,0,0,0,0.666219523631325,0,0,0.157731082679119,0,0,10.970584429488,0,0,5524.85834390192,3988.28035135275,15942.4020197253,8199.12383489183,6197.16812327885,350.403185477553,541.864778983851,393.128195391855,0,0,15.8481681015439,85.7889310661286,157.257974509134,29.8087260143059,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8419204597844,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.883885756421003,0,0.559198337475902,0.757261933331841,0,12.7540375028738,9091.23868418533,9369.32500715909,18097.3274219993,6929.21571566194,9230.69795486641,4029.0695247397,0,0,0,0,0,0,0,0,0,0,6870.32985881612,3.36619248741323,31.4697334817428,4.68410382268567,15.8322048722313,26.9820131789588,22.6083960828934,32.6896605837259,110.837933552774,0,7.80836527367523,0,0.970601099684455,0,0,61.5092812019803,0,0,3049.90178213537,0,0,0,0.149790639404823,0,0,0,0,0,0,1.01839363850316,0.124406970610093,0.252722758433675,0,0,0,0,18.536692593793,0,0,0,0,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0.414251545071004,1.40715635988658,0,0,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.116765342367169,4.27855609775049,0.492502392237286,0,0.438599962275997,1.75640092232841,0.671032093801859,0,0,7221.30250211091,11037.3733008363,0.853153002140936,7.66381017139447,172.682398171605,2835.6703562042,4643.47593352474,5386.23860337711,4619.06588507428,4954.96805287187,4385.0453879383,3113.27087449993,2318.90285219481,3448.77007100625,4771.8958651335,3547.30350048004,0.189667900953082,3.77020091612105,0,0.610953983535943,1.74557238450863,2.94570443539338,2.33975187359752,3.54264355151045,9.10592621479974,16.6586171294431,15703.0956568063,36.2053879403924,52.284692700112,104.336020146572,176.082585365221,287.965528744386,613.39367694144,1438.7683833915,1571.73888835719,7116.63182983507,2911.30618217893,4735.86570002937,5677.83749999254,8484.12451024348,13876.3899359199,2102.97130962292,10.1614254591633,0.947457058852424,0,2.54617628662782,0.704070744865506,0.167506257441816,14.0445748122748,3.12213836572478,1.26108115284953,2.21464689648775,3.50800491046472,14.9115616391322,10.8791538575514,16.4899926782923,0,0,0,0.551873492609465,0,0,0,0.252470927204373,11.042787679569,0,0.430846795465598,0,3.34198011123591,17.5507449089076,5.66734982344852,3.21481443702443,0,0,0.567760340833074,16.5601011410547,0.488660878060728,0,0,3.15614827001476,7.55808892411878,2.64047111658257,2.65771703592696,13.2197113615889,982.802798918745,17.8131527443978,36.3627325952416,1.26414703174326,0,1.03135543248187,0,0,0,0,0,0,0,0,1.64270195644597,0,0,0,0,0.0603129249281559,0.119372344003136,0,4061.78545843697,0,0.854354403989263,2.47664241555867,6.11141940320049,0.753473828018764,1.0935538217682,3.20289442489132,0,0,0,91.6483793294509,0.158167996790568,8.74273708645449,451.570329975951,165.388842147445,628.884183588992,338.23978073313,602.626345693424,21.9874991266585,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,119.788034056434,0,0,0,0,0.202725215290164,0,0.129920822977795,0.358053391334963,0.198681354781265,0.480781798079875,0.886137163047463,1.11063094942962,0.381034033274999,0.403304740547362,1.55932609183604,4.04089734889384,1.5193997283604,0,0,0,0,2.70465431645067,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,2.39414924040619,9.39034831647738,64.9094934572345,64.7704672520465,280.545193894722,328.480663690787,294.42409679438,308.082441208143,322.188944998842,323.693065959836,309.913078897323,353.590332206276,288.625387041151,307.911549071043,310.543486716564,273.371124903914,315.599484678621,347.800500277991,344.592672034624,360.012715004686,335.961701059626,330.472559266987,355.226642249411,327.971190747427,345.650673237498,311.526337802332,387.76475465938,361.103138716146,257.003160419244,286.503568769881,303.492310199111,313.470979067982,307.549629754142,263.510430600239,0,396.981939531858,357.975176044465,3.06061331310149,36.3975841547201,6.95603506861264 | |phase1_expression=0,11323.554027082,8393.37096901877,7478.42762456137,6304.27365710473,1750.64504749719,1608.89025578139,0,0,0,0,0,0,0,0.666219523631325,0,0,0.157731082679119,0,0,10.970584429488,0,0,5524.85834390192,3988.28035135275,15942.4020197253,8199.12383489183,6197.16812327885,350.403185477553,541.864778983851,393.128195391855,0,0,15.8481681015439,85.7889310661286,157.257974509134,29.8087260143059,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8419204597844,0,0,0,0,0,0.571301968807607,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.883885756421003,0,0.559198337475902,0.757261933331841,0,12.7540375028738,9091.23868418533,9369.32500715909,18097.3274219993,6929.21571566194,9230.69795486641,4029.0695247397,0,0,0,0,0,0,0,0,0,0,6870.32985881612,3.36619248741323,31.4697334817428,4.68410382268567,15.8322048722313,26.9820131789588,22.6083960828934,32.6896605837259,110.837933552774,0,7.80836527367523,0,0.970601099684455,0,0,61.5092812019803,0,0,3049.90178213537,0,0,0,0.149790639404823,0,0,0,0,0,0,1.01839363850316,0.124406970610093,0.252722758433675,0,0,0,0,18.536692593793,0,0,0,0,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0.414251545071004,1.40715635988658,0,0,0.196764231747404,0.462801338662135,0.465067889500816,0.268273401399619,0.116765342367169,4.27855609775049,0.492502392237286,0,0.438599962275997,1.75640092232841,0.671032093801859,0,0,7221.30250211091,11037.3733008363,0.853153002140936,7.66381017139447,172.682398171605,2835.6703562042,4643.47593352474,5386.23860337711,4619.06588507428,4954.96805287187,4385.0453879383,3113.27087449993,2318.90285219481,3448.77007100625,4771.8958651335,3547.30350048004,0.189667900953082,3.77020091612105,0,0.610953983535943,1.74557238450863,2.94570443539338,2.33975187359752,3.54264355151045,9.10592621479974,16.6586171294431,15703.0956568063,36.2053879403924,52.284692700112,104.336020146572,176.082585365221,287.965528744386,613.39367694144,1438.7683833915,1571.73888835719,7116.63182983507,2911.30618217893,4735.86570002937,5677.83749999254,8484.12451024348,13876.3899359199,2102.97130962292,10.1614254591633,0.947457058852424,0,2.54617628662782,0.704070744865506,0.167506257441816,14.0445748122748,3.12213836572478,1.26108115284953,2.21464689648775,3.50800491046472,14.9115616391322,10.8791538575514,16.4899926782923,0,0,0,0.551873492609465,0,0,0,0.252470927204373,11.042787679569,0,0.430846795465598,0,3.34198011123591,17.5507449089076,5.66734982344852,3.21481443702443,0,0,0.567760340833074,16.5601011410547,0.488660878060728,0,0,3.15614827001476,7.55808892411878,2.64047111658257,2.65771703592696,13.2197113615889,982.802798918745,17.8131527443978,36.3627325952416,1.26414703174326,0,1.03135543248187,0,0,0,0,0,0,0,0,1.64270195644597,0,0,0,0,0.0603129249281559,0.119372344003136,0,4061.78545843697,0,0.854354403989263,2.47664241555867,6.11141940320049,0.753473828018764,1.0935538217682,3.20289442489132,0,0,0,91.6483793294509,0.158167996790568,8.74273708645449,451.570329975951,165.388842147445,628.884183588992,338.23978073313,602.626345693424,21.9874991266585,0.129614973291793,0,0,0,0,0,0.258319646955462,0,0,119.788034056434,0,0,0,0,0.202725215290164,0,0.129920822977795,0.358053391334963,0.198681354781265,0.480781798079875,0.886137163047463,1.11063094942962,0.381034033274999,0.403304740547362,1.55932609183604,4.04089734889384,1.5193997283604,0,0,0,0,2.70465431645067,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,2.39414924040619,9.39034831647738,64.9094934572345,64.7704672520465,280.545193894722,328.480663690787,294.42409679438,308.082441208143,322.188944998842,323.693065959836,309.913078897323,353.590332206276,288.625387041151,307.911549071043,310.543486716564,273.371124903914,315.599484678621,347.800500277991,344.592672034624,360.012715004686,335.961701059626,330.472559266987,355.226642249411,327.971190747427,345.650673237498,311.526337802332,387.76475465938,361.103138716146,257.003160419244,286.503568769881,303.492310199111,313.470979067982,307.549629754142,263.510430600239,0,396.981939531858,357.975176044465,3.06061331310149,36.3975841547201,6.95603506861264 | ||
|short_description=p1@Fabp1 | |||
}} | }} |
Latest revision as of 16:32, 1 October 2015
Short description: | p1@Fabp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fabp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:207 |
Association with transcript: | 0bp_to_NM_017399, uc009cgh.1_5end |
EntrezGene: | Fabp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.51e-17 | 31 |
gastrointestinal system | 3.10e-16 | 47 |
digestive system | 6.80e-16 | 116 |
digestive tract | 6.80e-16 | 116 |
primitive gut | 6.80e-16 | 116 |
endoderm-derived structure | 1.40e-15 | 118 |
endoderm | 1.40e-15 | 118 |
presumptive endoderm | 1.40e-15 | 118 |
subdivision of digestive tract | 9.42e-15 | 114 |
digestive tract diverticulum | 7.36e-14 | 23 |
sac | 7.36e-14 | 23 |
liver | 1.12e-13 | 22 |
epithelial sac | 1.12e-13 | 22 |
digestive gland | 1.12e-13 | 22 |
epithelium of foregut-midgut junction | 1.12e-13 | 22 |
anatomical boundary | 1.12e-13 | 22 |
hepatobiliary system | 1.12e-13 | 22 |
foregut-midgut junction | 1.12e-13 | 22 |
hepatic diverticulum | 1.12e-13 | 22 |
liver primordium | 1.12e-13 | 22 |
septum transversum | 1.12e-13 | 22 |
liver bud | 1.12e-13 | 22 |
exocrine gland | 7.92e-11 | 25 |
exocrine system | 7.92e-11 | 25 |
abdomen element | 1.36e-09 | 49 |
abdominal segment element | 1.36e-09 | 49 |
abdominal segment of trunk | 1.36e-09 | 49 |
abdomen | 1.36e-09 | 49 |
mucosa | 1.47e-09 | 15 |
trunk region element | 9.01e-09 | 79 |
intestinal mucosa | 3.01e-08 | 13 |
wall of intestine | 3.01e-08 | 13 |
gastrointestinal system mucosa | 3.01e-08 | 13 |
subdivision of trunk | 6.16e-08 | 66 |