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FFCP PHASE1:Mm9::chr3:137940606..137940623,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=11522
|EntrezGene=11522
|HGNC=
|HGNC=
|MCL_coexpression_id=1457
|TSSclassifier=NA
|UniProt=E0CXV3,P00329,Q3UKA4
|UniProt=E0CXV3,P00329,Q3UKA4
|association_with_transcript=0bp_to_ENSMUST00000159159,ENSMUST00000161799,NM_007409,uc008rnf.1_5end
|association_with_transcript=0bp_to_ENSMUST00000159159,ENSMUST00000161799,NM_007409,uc008rnf.1_5end
|cluster_id=chr3:137940606..137940623,+
|description=CAGE_peak_1_at_Adh1_5end
|description=CAGE_peak_1_at_Adh1_5end
|id=chr3:137940606..137940623,+
|id=chr3:137940606..137940623,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!7.12e-13!66;UBERON:0001007!2.31e-12!128;UBERON:0001555!2.31e-12!128;UBERON:0007026!2.31e-12!128;UBERON:0004119!4.05e-12!130;UBERON:0000925!4.05e-12!130;UBERON:0006595!4.05e-12!130;UBERON:0004921!2.12e-11!126;UBERON:0004185!2.12e-11!126;UBERON:0005177!1.33e-10!85;UBERON:0000466!4.65e-10!79;UBERON:0005172!1.13e-09!49;UBERON:0005173!1.13e-09!49;UBERON:0002417!1.13e-09!49;UBERON:0000916!1.13e-09!49;UBERON:0005911!6.02e-09!69;UBERON:0009854!4.57e-08!23;UBERON:0009856!4.57e-08!23;UBERON:0002107!6.40e-08!22;UBERON:0007499!6.40e-08!22;UBERON:0006925!6.40e-08!22;UBERON:0009497!6.40e-08!22;UBERON:0000015!6.40e-08!22;UBERON:0002423!6.40e-08!22;UBERON:0006235!6.40e-08!22;UBERON:0008835!6.40e-08!22;UBERON:0003894!6.40e-08!22;UBERON:0004161!6.40e-08!22;UBERON:0008836!6.40e-08!22;UBERON:0002100!7.13e-08!98;UBERON:0002365!1.44e-07!25;UBERON:0002330!1.44e-07!25;UBERON:0005256!1.54e-07!47;UBERON:0000160!2.04e-07!43;UBERON:0005157!2.28e-07!27;UBERON:0000344!3.51e-07!15
|ontology_enrichment_uberon_v019_2=UBERON:0001007,5.30e-12,116;UBERON:0001555,5.30e-12,116;UBERON:0007026,5.30e-12,116;UBERON:0009569,5.56e-12,66;UBERON:0004119,9.71e-12,118;UBERON:0000925,9.71e-12,118;UBERON:0006595,9.71e-12,118;UBERON:0004921,4.96e-11,114;UBERON:0005177,6.00e-11,79;UBERON:0000160,1.02e-09,31;UBERON:0005172,4.35e-09,49;UBERON:0005173,4.35e-09,49;UBERON:0002417,4.35e-09,49;UBERON:0000916,4.35e-09,49;UBERON:0005911,1.24e-08,69;UBERON:0002100,1.45e-08,90;UBERON:0005256,3.08e-08,45;UBERON:0009854,7.59e-08,23;UBERON:0009856,7.59e-08,23;UBERON:0003104,9.12e-08,61;UBERON:0009142,9.12e-08,61;UBERON:0002107,1.08e-07,22;UBERON:0007499,1.08e-07,22;UBERON:0006925,1.08e-07,22;UBERON:0009497,1.08e-07,22;UBERON:0000015,1.08e-07,22;UBERON:0002423,1.08e-07,22;UBERON:0006235,1.08e-07,22;UBERON:0008835,1.08e-07,22;UBERON:0003894,1.08e-07,22;UBERON:0004161,1.08e-07,22;UBERON:0008836,1.08e-07,22;UBERON:0002365,2.30e-07,25;UBERON:0002330,2.30e-07,25;UBERON:0000344,2.48e-07,15
|phase1_expression=7.04654927261093,449.480325039497,573.299041630815,558.046469861101,463.829445930317,583.884107709553,464.655542144501,0.645616617207881,1.40788722151667,0.70219357896598,1.36974374580404,1.27635454392538,7.01922992717943,9.61624426608971,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.84877930359606,57.0640476913678,0,0,1629.20284130526,1167.92264991296,601.220866428426,1038.56717273953,829.564245840673,27.3633724017178,37.5524893342297,68.5147277924892,0,0,0,196.707953050618,225.580413751474,156.393726896975,0,0,0,0,0,0,19.7658004221656,19.2616169317078,6.24058957349717,0.782391344348039,0,0,0,1.67983705950435,0,0,6.5282592781021,0.336093799142464,0.514518872071894,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0.270011876663381,0.210324961351382,2.85650984403804,5.30084498283872,0,0,0.919218786610021,1.10115880999389,0.255374676170375,0,0.131886287730194,0.274462930807229,0,0,0.56276261003168,0.15279824777681,3.83017161115768,3.70166370077668,0.372798891650601,0.605809546665472,0.151143120213571,15.6526823898906,2065.01730475533,1104.95341727509,1836.07025795185,1863.55876523991,1900.0820281798,807.414971337441,3.40860645156115,2.85764605063156,2.47337702157238,0.14084341977668,32.0816193535795,15.2883143823987,0,0.649473123033642,0.253359865475099,0.505524445014783,940.646801125616,17.0899003207133,409.997188097046,688.042805954495,1754.02562055625,1889.43276901889,2305.60423253347,1563.3418613692,1945.06750060072,7.91023896749996,104.834533766936,1.76922110389975,3.72063754879041,11.9254419968613,4.363877278217,74.5567044872489,1.46390398505774,0.83778682725382,261.07711042318,0,0,0,0,0.457500602818626,0,0.347648640384553,0.511430914660661,0.83115217823824,0.324482526135515,41.0412636316775,25.5034289750691,55.5990068554084,196.552693397967,0.650602214813519,2.29902104433473,6.30217454318722,27.1268672104287,12.5187158438443,8.71173297936978,9.65127762965207,72.6956471776634,0.215567992932842,2.64748512234947,1.93546236580344,2.19195732427575,6.95118123063995,42.1385121491822,60.0883838311195,12.5391588095651,0,0,0,0.621377317606506,2.11073453982987,0.540186184383045,9.70653415899362,0.787056926989615,2.1597395804233,2.32533944750408,5.36546802799238,4.2035523252181,1.31647879930784,4.43252153013557,10.5389452409612,13.3041988557052,6.58650345873152,27.780728683397,0.630869845692382,0.411618449517138,653.568352741952,656.895207592244,1.06644125267617,6.0381534683714,49.6139726090059,239.801710777154,219.487129274887,154.272982777285,231.570182033722,87.7845428678978,49.7643713424534,44.1683367931355,35.8733920299181,143.811105384675,234.942060213793,412.22243563654,12.5180814629034,70.6055807928124,24.7957018480777,21.5870407516033,26.7654432291324,38.7851083993462,70.4455023564226,59.7821099317389,65.1544720541705,58.737050026777,4292.33758759483,0.333690211432188,0.982794975566015,3.59779379815766,13.7944882544182,56.676632541818,262.773879038425,755.77775308328,162.459497228585,524.137737776048,238.655222835409,534.022259904302,931.120416573849,2635.15543362222,3306.47372862236,2036.39410367477,70.9452250239762,17.6227012946551,201.261745905902,267.009019924371,376.208468006469,454.611982697088,418.480720677612,108.689441856794,336.708667810824,422.111698470565,266.448918426661,96.5154923675697,144.364644839889,82.4499633914616,0,0,7.86822836830458,21.2471294654644,1.9266070798535,1.17211686592203,0,72.2066851804507,1.57754109708128,0,0,0,0.668396022247182,1.13230612315533,0.809621403349789,1.16902343164525,0,1.60660658210904,169.760341909089,57.6932555881907,48.8660878060728,82.9799718551853,19.9117707509944,0.485561272309963,3.62788268357701,4.90373207365335,6.79194353625777,11.6825356218692,30.2361103006819,8.72480950746013,7.48644494607915,21.4904995396355,4.21674434299995,10.3135543248187,5.10659408630682,0,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,2.63278432963394,19.790221692449,2.3467170806371,4.44847348814022,147.09244150266,14.8397627647332,74.4351007068124,20.3857686257167,14.8021706563889,8.042904087508,153.901881740561,2.78137953015765,0.170870880797853,4.74689796315412,2.59272338317596,0.188368457004691,0.820165366326151,0.915112692826091,0,0.139951452323658,0,65.8722726430428,0.474503990371703,6.91286188231286,24.1931963440835,18.3997700492732,54.5906409365444,38.1666100269043,70.4207442779862,49.7336289769656,35.2552727353677,34.7950015328678,9.01908701894705,58.6104860492397,75.1181546675223,97.0311429836798,167.520291050617,199.199271953627,134.960824442617,36.7176365259939,18.140666585648,7.48910774560619,8.64090018773596,2.21207784439725,0.202725215290164,1.1298205288131,1.81889152168913,2.14832034800978,1.98681354781265,1.68273629327956,1.62458479892035,1.61546319917036,0.762068066549998,1.00826185136841,1.26695244961678,1.25075394132428,1.98690733708667,15.8711268530648,0,0,0,288.43206389006,36.2227177620781,170.697313817091,61.738093174771,196.616264781862,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,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|phase1_expression=7.04654927261093,449.480325039497,573.299041630815,558.046469861101,463.829445930317,583.884107709553,464.655542144501,0.645616617207881,1.40788722151667,0.70219357896598,1.36974374580404,1.27635454392538,7.01922992717943,9.61624426608971,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.84877930359606,57.0640476913678,0,0,1629.20284130526,1167.92264991296,601.220866428426,1038.56717273953,829.564245840673,27.3633724017178,37.5524893342297,68.5147277924892,0,0,0,196.707953050618,225.580413751474,156.393726896975,0,0,0,0,0,0,19.7658004221656,19.2616169317078,6.24058957349717,0.782391344348039,0,0,0,1.67983705950435,0,0,6.5282592781021,0.336093799142464,0.514518872071894,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0.270011876663381,0.210324961351382,2.85650984403804,5.30084498283872,0,0,0.919218786610021,1.10115880999389,0.255374676170375,0,0.131886287730194,0.274462930807229,0,0,0.56276261003168,0.15279824777681,3.83017161115768,3.70166370077668,0.372798891650601,0.605809546665472,0.151143120213571,15.6526823898906,2065.01730475533,1104.95341727509,1836.07025795185,1863.55876523991,1900.0820281798,807.414971337441,3.40860645156115,2.85764605063156,2.47337702157238,0.14084341977668,32.0816193535795,15.2883143823987,0,0.649473123033642,0.253359865475099,0.505524445014783,940.646801125616,17.0899003207133,409.997188097046,688.042805954495,1754.02562055625,1889.43276901889,2305.60423253347,1563.3418613692,1945.06750060072,7.91023896749996,104.834533766936,1.76922110389975,3.72063754879041,11.9254419968613,4.363877278217,74.5567044872489,1.46390398505774,0.83778682725382,261.07711042318,0,0,0,0,0.457500602818626,0,0.347648640384553,0.511430914660661,0.83115217823824,0.324482526135515,41.0412636316775,25.5034289750691,55.5990068554084,196.552693397967,0.650602214813519,2.29902104433473,6.30217454318722,27.1268672104287,12.5187158438443,8.71173297936978,9.65127762965207,72.6956471776634,0.215567992932842,2.64748512234947,1.93546236580344,2.19195732427575,6.95118123063995,42.1385121491822,60.0883838311195,12.5391588095651,0,0,0,0.621377317606506,2.11073453982987,0.540186184383045,9.70653415899362,0.787056926989615,2.1597395804233,2.32533944750408,5.36546802799238,4.2035523252181,1.31647879930784,4.43252153013557,10.5389452409612,13.3041988557052,6.58650345873152,27.780728683397,0.630869845692382,0.411618449517138,653.568352741952,656.895207592244,1.06644125267617,6.0381534683714,49.6139726090059,239.801710777154,219.487129274887,154.272982777285,231.570182033722,87.7845428678978,49.7643713424534,44.1683367931355,35.8733920299181,143.811105384675,234.942060213793,412.22243563654,12.5180814629034,70.6055807928124,24.7957018480777,21.5870407516033,26.7654432291324,38.7851083993462,70.4455023564226,59.7821099317389,65.1544720541705,58.737050026777,4292.33758759483,0.333690211432188,0.982794975566015,3.59779379815766,13.7944882544182,56.676632541818,262.773879038425,755.77775308328,162.459497228585,524.137737776048,238.655222835409,534.022259904302,931.120416573849,2635.15543362222,3306.47372862236,2036.39410367477,70.9452250239762,17.6227012946551,201.261745905902,267.009019924371,376.208468006469,454.611982697088,418.480720677612,108.689441856794,336.708667810824,422.111698470565,266.448918426661,96.5154923675697,144.364644839889,82.4499633914616,0,0,7.86822836830458,21.2471294654644,1.9266070798535,1.17211686592203,0,72.2066851804507,1.57754109708128,0,0,0,0.668396022247182,1.13230612315533,0.809621403349789,1.16902343164525,0,1.60660658210904,169.760341909089,57.6932555881907,48.8660878060728,82.9799718551853,19.9117707509944,0.485561272309963,3.62788268357701,4.90373207365335,6.79194353625777,11.6825356218692,30.2361103006819,8.72480950746013,7.48644494607915,21.4904995396355,4.21674434299995,10.3135543248187,5.10659408630682,0,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,2.63278432963394,19.790221692449,2.3467170806371,4.44847348814022,147.09244150266,14.8397627647332,74.4351007068124,20.3857686257167,14.8021706563889,8.042904087508,153.901881740561,2.78137953015765,0.170870880797853,4.74689796315412,2.59272338317596,0.188368457004691,0.820165366326151,0.915112692826091,0,0.139951452323658,0,65.8722726430428,0.474503990371703,6.91286188231286,24.1931963440835,18.3997700492732,54.5906409365444,38.1666100269043,70.4207442779862,49.7336289769656,35.2552727353677,34.7950015328678,9.01908701894705,58.6104860492397,75.1181546675223,97.0311429836798,167.520291050617,199.199271953627,134.960824442617,36.7176365259939,18.140666585648,7.48910774560619,8.64090018773596,2.21207784439725,0.202725215290164,1.1298205288131,1.81889152168913,2.14832034800978,1.98681354781265,1.68273629327956,1.62458479892035,1.61546319917036,0.762068066549998,1.00826185136841,1.26695244961678,1.25075394132428,1.98690733708667,15.8711268530648,0,0,0,288.43206389006,36.2227177620781,170.697313817091,61.738093174771,196.616264781862,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,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|short_description=p1@Adh1
|short_description=p1@Adh1
}}
}}

Latest revision as of 16:45, 1 October 2015

Short description:p1@Adh1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Adh1_5end
Coexpression cluster:MCL_coexpression_mm9:1457
Association with transcript: 0bp_to_ENSMUST00000159159, ENSMUST00000161799, NM_007409, uc008rnf.1_5end
EntrezGene:Adh1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Adh1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5449.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6573.30
CD326+ enterocyte, pool1.CNhs13542.11848-124I3558.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I4463.83
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7583.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8464.66
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A357.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11629.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21167.92
GP2+ M cell, pool1.CNhs13228.11845-124H9601.22
GP2+ M cell, pool2.CNhs13231.11846-124I11038.57
GP2+ M cell, pool3.CNhs13240.11847-124I2829.56
Ileum epithelium, pool1.CNhs13199.10252-104B927.36
Ileum epithelium, pool2.CNhs13232.10253-104C137.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C868.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5196.71
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6225.58
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7156.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.26
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.65
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72065.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C41104.95
Mouse hepatocyte, donor3.CNhs12615.11637-122C81836.07
Mouse hepatocyte, donor6.CNhs13090.11822-124F41863.56
Mouse hepatocyte, donor8.CNhs13091.11824-124F61900.08
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7807.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H132.08
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6940.65
accessory axillary lymph node, adult.CNhs10475.1063-29H917.09
adrenal gland, adult.CNhs10508.49-24D7410.00
adrenal gland, embryo E14.CNhs11038.406-44C5688.04
adrenal gland, embryo E16.CNhs11004.1254-43D61754.03
adrenal gland, embryo E17.CNhs11043.1263-45I11889.43
adrenal gland, embryo E18.CNhs11026.1262-18F52305.60
adrenal gland, neonate N00.CNhs11191.1311-23C11563.34
adrenal gland, neonate N25.CNhs11223.1377-27I31945.07
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H1104.83
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.72
bone (os femoris), neonate N16.CNhs11225.1525-43A611.93
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H474.56
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H7261.08
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B141.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.50
epididymis, adult.CNhs10490.58-23B255.60
eyeball, adult.CNhs10484.31-12G4196.55
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D427.13
eyeball, neonate N00.CNhs11207.633-15C612.52
eyeball, neonate N01.CNhs11140.1532-43E78.71
eyeball, neonate N02.CNhs11205.1551-44G89.65
eyeball, neonate N16.CNhs11188.777-19A272.70
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E76.95
forelimb, embryo E17.CNhs10598.1517-43C442.14
forelimb, embryo E18.CNhs11008.1520-43B560.09
gonad, embryo E13.CNhs11044.1564-45I612.54
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D49.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E34.20
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G14.43
heart, neonate N16.CNhs11209.782-15G110.54
heart, neonate N20.CNhs11127.821-26I613.30
heart, neonate N25.CNhs11196.1351-25D36.59
heart, neonate N30.CNhs11202.1390-42D227.78
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I3653.57
intestine, adult.CNhs10496.178-9A3656.90
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D56.04
intestine, embryo E15.CNhs10602.976-16D849.61
intestine, embryo E16.CNhs10585.463-22H4239.80
intestine, embryo E17.CNhs10582.482-18D3219.49
intestine, embryo E18.CNhs10526.1289-20F7154.27
intestine, neonate N00.CNhs11126.644-26D1231.57
intestine, neonate N01.CNhs11192.1322-23E987.78
intestine, neonate N06.CNhs11102.688-20B849.76
intestine, neonate N07.CNhs11095.720-20F244.17
intestine, neonate N10.CNhs11098.755-23A535.87
intestine, neonate N20.CNhs11187.827-18D1143.81
intestine, neonate N25.CNhs11121.1352-25E3234.94
intestine, neonate N30.CNhs11131.1384-42G1412.22
kidney, embryo E14.CNhs10606.411-4I912.52
kidney, embryo E15.CNhs10997.434-16F870.61
kidney, embryo E16.CNhs10584.464-22A524.80
kidney, embryo E17.CNhs11028.483-18I221.59
kidney, embryo E18.CNhs11001.1288-20C726.77
kidney, neonate N00.CNhs11214.646-21G738.79
kidney, neonate N10.CNhs11206.758-6D570.45
kidney, neonate N20.CNhs11113.832-19I159.78
kidney, neonate N25.CNhs11122.1353-25F365.15
kidney, neonate N30.CNhs11203.1385-42H158.74
liver, adult pregnant day01.CNhs10466.508-5B24292.34
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D713.79
liver, embryo E16.CNhs10523.462-17F556.68
liver, embryo E17.CNhs10510.481-18A3262.77
liver, embryo E18.CNhs10579.499-43G4755.78
liver, neonate N00.CNhs11117.641-24F4162.46
liver, neonate N03.CNhs11123.1345-25G2524.14
liver, neonate N06.CNhs11101.684-20A8238.66
liver, neonate N07.CNhs11103.716-20H2534.02
liver, neonate N10.CNhs11115.751-24B9931.12
liver, neonate N20.CNhs11220.823-25A32635.16
liver, neonate N25.CNhs11198.1368-26H13306.47
liver, neonate N30.CNhs11106.1382-42D12036.39
lung, adult.CNhs10474.28-22B170.95
lung, embryo E12.CNhs10522.354-16G217.62
lung, embryo E14.CNhs10604.404-26F8201.26
lung, embryo E15.CNhs11020.432-17C5267.01
lung, embryo E16.CNhs10998.458-17B6376.21
lung, embryo E17.CNhs10605.480-44A6454.61
lung, embryo E18.CNhs10583.1287-20I6418.48
lung, neonate N00.CNhs11224.640-42C6108.69
lung, neonate N06.CNhs11212.683-20E5336.71
lung, neonate N07.CNhs11111.715-19A3422.11
lung, neonate N10.CNhs11219.750-23E6266.45
lung, neonate N20.CNhs11109.822-18A496.52
lung, neonate N25.CNhs11119.1359-25C7144.36
lung, neonate N30.CNhs11133.1394-42H282.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H221.25
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C272.21
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I7169.76
ovary, embryo E18.CNhs11040.505-44H757.69
ovary, neonate N00.CNhs11217.1299-22I448.87
oviduct, adult pregnant day01.CNhs10500.988-6G682.98
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E54.90
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I711.68
pancreas, neonate N00.CNhs11105.645-26G930.24
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B621.49
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E919.79
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F8147.09
skin, adult.CNhs10492.30-1C314.84
skin, neonate N00.CNhs11124.650-25G474.44
skin, neonate N03.CNhs11215.662-22H320.39
skin, neonate N06.CNhs11097.693-20I514.80
skin, neonate N10.CNhs11108.762-6C48.04
small intestine, neonate N16.CNhs11114.790-21I1153.90
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H665.87
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D424.19
stomach, embryo E17.CNhs11006.1035-18D518.40
stomach, embryo E18.CNhs10999.1286-20C654.59
stomach, neonate N03.CNhs11193.1340-24B838.17
stomach, neonate N07.CNhs11210.718-18A970.42
stomach, neonate N25.CNhs11104.1355-25E449.73
stomach, neonate N30.CNhs11134.1386-42I135.26
submandibular gland, adult.CNhs10469.59-29C134.80
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F558.61
testis, embryo E15.CNhs11034.443-27C575.12
testis, embryo E16.CNhs11033.470-26G597.03
testis, embryo E17.CNhs11029.486-18I5167.52
testis, embryo E18.CNhs11027.503-18G5199.20
testis, neonate N00.CNhs11189.1300-22B7134.96
testis, neonate N07.CNhs11222.726-26I436.72
testis, neonate N10.CNhs11204.763-44D918.14
testis, neonate N20.CNhs11110.839-18H37.49
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.13
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B415.87
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E4288.43
uterus, adult pregnant day19.CNhs10497.590-15F536.22
uterus, adult.CNhs10509.92-27E5170.70
vagina, adult.CNhs10502.89-27D561.74
vesicular gland, adult.CNhs10491.51-27F8196.62
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D227.47
whole body, embryo E14.CNhs10519.395-14B127.46
whole body, embryo E16.CNhs10514.453-14F296.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G585.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G578.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G596.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G592.99
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5101.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G592.80
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5116.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5107.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5113.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G592.40
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G587.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G596.07
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5112.50
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G589.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G588.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5100.27
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5113.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G588.08
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G596.37
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G593.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G593.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G592.60
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G597.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G567.34
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G569.88
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G577.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G581.44
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G593.43
whole body, embryo E17.5.CNhs10513.490-9F9108.61
whole body, embryo E17.CNhs10517.475-3I523.73
whole body, embryo E18.CNhs10516.493-3B3131.00
whole body, neonate N00.CNhs10525.657-19C264.25
whole body, neonate N01.CNhs10576.659-23C657.39
whole body, neonate N06.CNhs10515.692-21D120.07
whole body, neonate N10.CNhs10518.761-6B417.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive system5.30e-12116
digestive tract5.30e-12116
primitive gut5.30e-12116
subdivision of trunk5.56e-1266
endoderm-derived structure9.71e-12118
endoderm9.71e-12118
presumptive endoderm9.71e-12118
subdivision of digestive tract4.96e-11114
trunk region element6.00e-1179
intestine1.02e-0931
abdomen element4.35e-0949
abdominal segment element4.35e-0949
abdominal segment of trunk4.35e-0949
abdomen4.35e-0949
endo-epithelium1.24e-0869
trunk1.45e-0890
trunk mesenchyme3.08e-0845
digestive tract diverticulum7.59e-0823
sac7.59e-0823
mesenchyme9.12e-0861
entire embryonic mesenchyme9.12e-0861
liver1.08e-0722
epithelial sac1.08e-0722
digestive gland1.08e-0722
epithelium of foregut-midgut junction1.08e-0722
anatomical boundary1.08e-0722
hepatobiliary system1.08e-0722
foregut-midgut junction1.08e-0722
hepatic diverticulum1.08e-0722
liver primordium1.08e-0722
septum transversum1.08e-0722
liver bud1.08e-0722
exocrine gland2.30e-0725
exocrine system2.30e-0725
mucosa2.48e-0715
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