FFCP PHASE1:Mm9::chr6:72047555..72047624,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20454 | |EntrezGene=20454 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=704 | |||
|TSSclassifier=NA | |||
|UniProt=O88829 | |UniProt=O88829 | ||
|association_with_transcript=0bp_to_ENSMUST00000069994,ENSMUST00000114112,NM_001035228,NM_011375,uc009chy.1,uc009chz.1_5end | |association_with_transcript=0bp_to_ENSMUST00000069994,ENSMUST00000114112,NM_001035228,NM_011375,uc009chy.1,uc009chz.1_5end | ||
|cluster_id=chr6:72047555..72047624,+ | |||
|description=CAGE_peak_1_at_St3gal5_5end | |description=CAGE_peak_1_at_St3gal5_5end | ||
|id=chr6:72047555..72047624,+ | |id=chr6:72047555..72047624,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!4.96e-13!114;UBERON:0002107!1.28e-11!22;UBERON:0007499!1.28e-11!22;UBERON:0006925!1.28e-11!22;UBERON:0009497!1.28e-11!22;UBERON:0000015!1.28e-11!22;UBERON:0002423!1.28e-11!22;UBERON:0006235!1.28e-11!22;UBERON:0008835!1.28e-11!22;UBERON:0003894!1.28e-11!22;UBERON:0004161!1.28e-11!22;UBERON:0008836!1.28e-11!22;UBERON:0009854!2.07e-11!23;UBERON:0009856!2.07e-11!23;UBERON:0004111!2.64e-11!122;UBERON:0002365!1.57e-09!25;UBERON:0002330!1.57e-09!25;UBERON:0001017!7.48e-09!73;UBERON:0005743!7.48e-09!73;UBERON:0000073!7.99e-09!75;UBERON:0001016!7.99e-09!75;UBERON:0001049!8.62e-09!52;UBERON:0005068!8.62e-09!52;UBERON:0006241!8.62e-09!52;UBERON:0007135!8.62e-09!52;UBERON:0005256!8.63e-09!47;UBERON:0000955!8.67e-09!50;UBERON:0006238!8.67e-09!50;UBERON:0002616!1.75e-08!49;UBERON:0005172!3.23e-08!49;UBERON:0005173!3.23e-08!49;UBERON:0002417!3.23e-08!49;UBERON:0000916!3.23e-08!49;UBERON:0002020!7.51e-08!34;UBERON:0002346!8.29e-08!71;UBERON:0003075!8.29e-08!71;UBERON:0007284!8.29e-08!71;UBERON:0002791!7.37e-07!29;UBERON:0003528!7.37e-07!29;UBERON:0001893!7.37e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.93e-13,114;UBERON:0002107,1.28e-11,22;UBERON:0007499,1.28e-11,22;UBERON:0006925,1.28e-11,22;UBERON:0009497,1.28e-11,22;UBERON:0000015,1.28e-11,22;UBERON:0002423,1.28e-11,22;UBERON:0006235,1.28e-11,22;UBERON:0008835,1.28e-11,22;UBERON:0003894,1.28e-11,22;UBERON:0004161,1.28e-11,22;UBERON:0008836,1.28e-11,22;UBERON:0009854,2.06e-11,23;UBERON:0009856,2.06e-11,23;UBERON:0004111,2.63e-11,122;UBERON:0000073,1.56e-09,54;UBERON:0002365,1.57e-09,25;UBERON:0002330,1.57e-09,25;UBERON:0005256,6.45e-09,45;UBERON:0001017,7.45e-09,73;UBERON:0001016,7.96e-09,75;UBERON:0001049,8.59e-09,52;UBERON:0005068,8.59e-09,52;UBERON:0006241,8.59e-09,52;UBERON:0007135,8.59e-09,52;UBERON:0005172,3.22e-08,49;UBERON:0005173,3.22e-08,49;UBERON:0002417,3.22e-08,49;UBERON:0000916,3.22e-08,49;UBERON:0002020,7.49e-08,34;UBERON:0000955,1.11e-07,47;UBERON:0006238,1.11e-07,47;UBERON:0002616,2.18e-07,46;UBERON:0003528,7.35e-07,29;UBERON:0002791,7.35e-07,29;UBERON:0001893,7.35e-07,29 | |||
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| ||
|short_description=p1@St3gal5 | |short_description=p1@St3gal5 | ||
}} | }} |
Latest revision as of 17:04, 1 October 2015
Short description: | p1@St3gal5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_St3gal5_5end |
Coexpression cluster: | MCL_coexpression_mm9:704 |
Association with transcript: | 0bp_to_ENSMUST00000069994, ENSMUST00000114112, NM_001035228, NM_011375, uc009chy.1, uc009chz.1_5end |
EntrezGene: | St3gal5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 4.93e-13 | 114 |
liver | 1.28e-11 | 22 |
epithelial sac | 1.28e-11 | 22 |
digestive gland | 1.28e-11 | 22 |
epithelium of foregut-midgut junction | 1.28e-11 | 22 |
anatomical boundary | 1.28e-11 | 22 |
hepatobiliary system | 1.28e-11 | 22 |
foregut-midgut junction | 1.28e-11 | 22 |
hepatic diverticulum | 1.28e-11 | 22 |
liver primordium | 1.28e-11 | 22 |
septum transversum | 1.28e-11 | 22 |
liver bud | 1.28e-11 | 22 |
digestive tract diverticulum | 2.06e-11 | 23 |
sac | 2.06e-11 | 23 |
anatomical conduit | 2.63e-11 | 122 |
regional part of nervous system | 1.56e-09 | 54 |
exocrine gland | 1.57e-09 | 25 |
exocrine system | 1.57e-09 | 25 |
trunk mesenchyme | 6.45e-09 | 45 |
central nervous system | 7.45e-09 | 73 |
nervous system | 7.96e-09 | 75 |
neural tube | 8.59e-09 | 52 |
neural rod | 8.59e-09 | 52 |
future spinal cord | 8.59e-09 | 52 |
neural keel | 8.59e-09 | 52 |
abdomen element | 3.22e-08 | 49 |
abdominal segment element | 3.22e-08 | 49 |
abdominal segment of trunk | 3.22e-08 | 49 |
abdomen | 3.22e-08 | 49 |
gray matter | 7.49e-08 | 34 |
brain | 1.11e-07 | 47 |
future brain | 1.11e-07 | 47 |
regional part of brain | 2.18e-07 | 46 |
brain grey matter | 7.35e-07 | 29 |
regional part of telencephalon | 7.35e-07 | 29 |
telencephalon | 7.35e-07 | 29 |