FFCP PHASE1:Mm9::chr13:89882268..89882279,-: Difference between revisions
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{{FFCP|EntrezGene=13003|HGNC=|MCL_coexpression_id=1123|UniProt=E9QQ15,E9PYH0,E9QMK2,E9QMK3,G3XA35,Q8BS97,Q62059|association_with_transcript=-151bp_to_ENSMUST00000022114,NM_001081249,NM_001134474,NM_001134475,NM_019389,NM_172955,uc007rjg.1,uc007rjh.1,uc007rji.2,uc007rjk.2,uc011zck.1_5end|description=CAGE_peak_8_at_Vcan_5end|id=chr13:89882268..89882279,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!2.70e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002102,2.96e-08,7;UBERON:0004710,2.96e-08,7;UBERON:0005419,2.96e-08,7;UBERON:0005417,2.96e-08,7;UBERON:0005729,2.96e-08,7;UBERON:0010708,6.01e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,1.71920063963254,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0.599200221036809,0,0.933206510776299,0.945041568321835,1.05162480675691,0.285650984403804,0.662605622854841,2.20483438586917,0.862609239164127,0,1.10115880999389,0.255374676170375,0.153606533256243,0.263772575460388,0.365950574409639,1.56274011167028,0,0,0,1.47314292736834,0.711858403995515,0.186399445825301,0.37863096666592,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0,0,0,0,0,0,0.693941307064543,0,0.461230994512117,0.301445281105245,0.470354828542819,0,0,0,0,1.13236794963186,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,0.149790639404823,0,1.88481528169297,0,0,0.20778804455956,0.324482526135515,6.51771928642024,0.622034853050465,0.505445516867349,0.420883711772948,0.650602214813519,0.919608417733892,1.98068342785884,1.20563854268572,0.408218994907967,0.768682321709099,0.468508622798644,0.776110112217047,3.88022387279116,7.56424320671277,7.03804496655795,3.94552318369635,4.17070873838397,3.1342694986995,2.05782136407943,1.19420560091096,0,0,0,6.00664740352955,2.57978665979206,2.34080679899319,3.07768156260773,2.75469924446365,2.00547246753592,1.62773761325285,0.804820204198858,1.5179494507732,1.6455984991348,0.164167464079095,0.243206428637567,0.584799949701329,0.658650345873152,0.134206418760372,0.420579897128254,1.54356918568927,0,0,1.91959425481711,1.62565670302307,1.15980715189884,1.61346819698674,0.444756087689741,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,2.28497025219458,3.38123207019241,2.8511185898344,1.16371492300575,1.75339549725796,0.189709611372772,0,0,0,0,0.500535317148282,0.786235980452812,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,3.60033682363921,2.11854469374634,2.03694102930226,1.87752198630802,1.17254380209271,0.714130922658041,0.390267295715598,1.10344600874334,0.8858587585951,1.43509291791738,0.163863314715738,0,0.144649058581512,0,0,0.983528546038072,0.551873492609465,0.321101179975584,0.468846746368813,1.3114795630134,0.252470927204373,0.631016438832513,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0.321321316421807,0.567760340833074,3.73937767701236,3.25773918707152,0.659880491890142,0,0.971122544619926,0.302323556964751,0.565815239267694,0.885905678642318,1.53717573971964,2.58428293168221,0,2.13898427030833,0,0,0,0,1.8006109403131,0.517434735131018,1.50035924522115,1.24138163549592,1.24858172321449,1.15184314421485,0.913394847343798,0,0,0.220528398054962,0.8244312647074,1.93757312035087,1.62844897306021,1.43246812803764,0.656563598980245,0,0.18542530201051,0,2.47664241555867,1.11116716421827,0.188368457004691,0,0,0,0,0,0,1.58167996790568,1.82987520414164,0.972048067396211,1.46361807210128,1.09181281873089,0.674321731924103,0.578574190077352,0.26175594198403,0.129614973291793,0,0,2.24274819065968,1.15820943319968,0.972255941720238,1.54991788173277,2.70329800785245,1.40828686374905,0.911430693907651,0.104859344425711,0,0,0,1.82452693761148,0.718976700153791,0,0.537080087002444,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0.269141569828427,0,0.386379188064381,0.750729901804728,0.36630324853453,0.214368379079066,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0,0,2.59468368960442,4.78829848081237,2.56100408631201,2.43106717068294,1.46729213839588,1.47074806760011,1.33348036680969,2.47242068686673,2.24643446714271,1.76888048234658,1.77435509923168,2.45214243801899,1.591905626988,2.30490548657529,2.01024141344646,3.33405583898152,2.31768651889711,1.73618298417335,3.29668720642645,1.61918812147837,1.02860775715625,1.59728225543404,0.953744759789284,1.45346416632329,2.1645157495526,1.77690676572521,1.46342378298218,3.41990624869196,1.49384525230448,2.80571135828869,1.77952527186261,2.36410757701352,2.45538625901814,2.47898945897546,2.89359916471712,2.49810577937946,2.10538447600868,1.50409737833809,1.53030665655075,0.882365676478062,0.231867835620421|short_description=p8@Vcan}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13003 | |||
|HGNC= | |||
|MCL_coexpression_id=1123 | |||
|TSSclassifier=NA | |||
|UniProt=E9QQ15,E9PYH0,E9QMK2,E9QMK3,G3XA35,Q8BS97,Q62059 | |||
|association_with_transcript=-151bp_to_ENSMUST00000022114,NM_001081249,NM_001134474,NM_001134475,NM_019389,NM_172955,uc007rjg.1,uc007rjh.1,uc007rji.2,uc007rjk.2,uc011zck.1_5end | |||
|cluster_id=chr13:89882268..89882279,- | |||
|description=CAGE_peak_8_at_Vcan_5end | |||
|id=chr13:89882268..89882279,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.70e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002102,2.96e-08,7;UBERON:0004710,2.96e-08,7;UBERON:0005419,2.96e-08,7;UBERON:0005417,2.96e-08,7;UBERON:0005729,2.96e-08,7;UBERON:0010708,6.01e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0,0,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,1.71920063963254,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0.599200221036809,0,0.933206510776299,0.945041568321835,1.05162480675691,0.285650984403804,0.662605622854841,2.20483438586917,0.862609239164127,0,1.10115880999389,0.255374676170375,0.153606533256243,0.263772575460388,0.365950574409639,1.56274011167028,0,0,0,1.47314292736834,0.711858403995515,0.186399445825301,0.37863096666592,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0.14084341977668,0,2.54805239706646,0,0,0,0,0,0,0,0.693941307064543,0,0.461230994512117,0.301445281105245,0.470354828542819,0,0,0,0,1.13236794963186,0,0.484875253135222,0,0.292780797011547,0.41889341362691,0,0,0,0,0.149790639404823,0,1.88481528169297,0,0,0.20778804455956,0.324482526135515,6.51771928642024,0.622034853050465,0.505445516867349,0.420883711772948,0.650602214813519,0.919608417733892,1.98068342785884,1.20563854268572,0.408218994907967,0.768682321709099,0.468508622798644,0.776110112217047,3.88022387279116,7.56424320671277,7.03804496655795,3.94552318369635,4.17070873838397,3.1342694986995,2.05782136407943,1.19420560091096,0,0,0,6.00664740352955,2.57978665979206,2.34080679899319,3.07768156260773,2.75469924446365,2.00547246753592,1.62773761325285,0.804820204198858,1.5179494507732,1.6455984991348,0.164167464079095,0.243206428637567,0.584799949701329,0.658650345873152,0.134206418760372,0.420579897128254,1.54356918568927,0,0,1.91959425481711,1.62565670302307,1.15980715189884,1.61346819698674,0.444756087689741,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,2.28497025219458,3.38123207019241,2.8511185898344,1.16371492300575,1.75339549725796,0.189709611372772,0,0,0,0,0.500535317148282,0.786235980452812,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0.184753190166605,3.60033682363921,2.11854469374634,2.03694102930226,1.87752198630802,1.17254380209271,0.714130922658041,0.390267295715598,1.10344600874334,0.8858587585951,1.43509291791738,0.163863314715738,0,0.144649058581512,0,0,0.983528546038072,0.551873492609465,0.321101179975584,0.468846746368813,1.3114795630134,0.252470927204373,0.631016438832513,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0.321321316421807,0.567760340833074,3.73937767701236,3.25773918707152,0.659880491890142,0,0.971122544619926,0.302323556964751,0.565815239267694,0.885905678642318,1.53717573971964,2.58428293168221,0,2.13898427030833,0,0,0,0,1.8006109403131,0.517434735131018,1.50035924522115,1.24138163549592,1.24858172321449,1.15184314421485,0.913394847343798,0,0,0.220528398054962,0.8244312647074,1.93757312035087,1.62844897306021,1.43246812803764,0.656563598980245,0,0.18542530201051,0,2.47664241555867,1.11116716421827,0.188368457004691,0,0,0,0,0,0,1.58167996790568,1.82987520414164,0.972048067396211,1.46361807210128,1.09181281873089,0.674321731924103,0.578574190077352,0.26175594198403,0.129614973291793,0,0,2.24274819065968,1.15820943319968,0.972255941720238,1.54991788173277,2.70329800785245,1.40828686374905,0.911430693907651,0.104859344425711,0,0,0,1.82452693761148,0.718976700153791,0,0.537080087002444,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0.269141569828427,0,0.386379188064381,0.750729901804728,0.36630324853453,0.214368379079066,0.501572104035363,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0,0,2.59468368960442,4.78829848081237,2.56100408631201,2.43106717068294,1.46729213839588,1.47074806760011,1.33348036680969,2.47242068686673,2.24643446714271,1.76888048234658,1.77435509923168,2.45214243801899,1.591905626988,2.30490548657529,2.01024141344646,3.33405583898152,2.31768651889711,1.73618298417335,3.29668720642645,1.61918812147837,1.02860775715625,1.59728225543404,0.953744759789284,1.45346416632329,2.1645157495526,1.77690676572521,1.46342378298218,3.41990624869196,1.49384525230448,2.80571135828869,1.77952527186261,2.36410757701352,2.45538625901814,2.47898945897546,2.89359916471712,2.49810577937946,2.10538447600868,1.50409737833809,1.53030665655075,0.882365676478062,0.231867835620421 | |||
|short_description=p8@Vcan | |||
}} |
Latest revision as of 23:59, 1 October 2015
Short description: | p8@Vcan |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Vcan_5end |
Coexpression cluster: | MCL_coexpression_mm9:1123 |
Association with transcript: | -151bp_to_ENSMUST00000022114, NM_001081249, NM_001134474, NM_001134475, NM_019389, NM_172955, uc007rjg.1, uc007rjh.1, uc007rji.2, uc007rjk.2, uc011zck.1_5end |
EntrezGene: | Vcan |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
forelimb | 2.96e-08 | 7 |
pectoral appendage | 2.96e-08 | 7 |
pectoral appendage bud | 2.96e-08 | 7 |
forelimb bud | 2.96e-08 | 7 |
forelimb/pectoral fin field | 2.96e-08 | 7 |
pectoral complex | 6.01e-07 | 8 |