FFCP PHASE1:Mm9::chr2:11475520..11475588,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=170768 | |EntrezGene=170768 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U3S6,Q7TS91,Q8BVM1 | |UniProt=Q3U3S6,Q7TS91,Q8BVM1 | ||
|association_with_transcript=0bp_to_NM_001177758,uc008iih.2_5end | |association_with_transcript=0bp_to_NM_001177758,uc008iih.2_5end | ||
|cluster_id=chr2:11475520..11475588,- | |||
|description=CAGE_peak_2_at_Pfkfb3_5end | |description=CAGE_peak_2_at_Pfkfb3_5end | ||
|id=chr2:11475520..11475588,- | |id=chr2:11475520..11475588,- | ||
|ontology_enrichment_celltype=CL:0000988!5.51e-08!32;CL:0002032!5.51e-08!32;CL:0000037!5.51e-08!32;CL:0000566!5.51e-08!32;CL:0000837!5.51e-08!32;CL:0000838!8.67e-08!12;CL:0000084!2.50e-07!11;CL:0000827!2.50e-07!11;CL:0000791!5.00e-07!9;CL:0000789!5.00e-07!9;CL:0002420!5.00e-07!9;CL:0002419!5.00e-07!9;CL:0000790!5.00e-07!9 | |ontology_enrichment_celltype=CL:0000988!5.51e-08!32;CL:0002032!5.51e-08!32;CL:0000037!5.51e-08!32;CL:0000566!5.51e-08!32;CL:0000837!5.51e-08!32;CL:0000838!8.67e-08!12;CL:0000084!2.50e-07!11;CL:0000827!2.50e-07!11;CL:0000791!5.00e-07!9;CL:0000789!5.00e-07!9;CL:0002420!5.00e-07!9;CL:0002419!5.00e-07!9;CL:0000790!5.00e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.42e-08,32;CL:0002032,1.42e-08,32;CL:0000037,1.42e-08,32;CL:0000837,1.42e-08,32;CL:0000838,6.17e-08,12;CL:0000084,1.82e-07,11;CL:0000827,1.82e-07,11;CL:0000791,3.71e-07,9;CL:0000789,3.71e-07,9;CL:0002420,3.71e-07,9;CL:0002419,3.71e-07,9;CL:0000790,3.71e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.33e-15!48;UBERON:0002390!3.13e-15!45;UBERON:0003061!3.13e-15!45;UBERON:0002405!3.04e-14!70;UBERON:0004177!9.81e-11!29;UBERON:0005057!3.48e-09!51;UBERON:0002370!1.28e-08!23;UBERON:0000974!1.28e-08!23;UBERON:0004807!1.28e-08!23;UBERON:0005058!1.28e-08!23;UBERON:0003351!1.28e-08!23;UBERON:0009113!1.28e-08!23;UBERON:0003295!1.28e-08!23;UBERON:0009722!1.28e-08!23;UBERON:0005562!1.28e-08!23;UBERON:0007690!1.28e-08!23;UBERON:0003408!4.43e-08!24;UBERON:0006562!5.06e-08!24;UBERON:0001557!5.06e-08!24;UBERON:0001042!5.06e-08!24;UBERON:0008814!5.06e-08!24;UBERON:0009145!5.06e-08!24;UBERON:0003081!1.69e-07!88;UBERON:0000926!4.76e-07!193;UBERON:0004120!4.76e-07!193;UBERON:0006603!4.76e-07!193 | |ontology_enrichment_uberon=UBERON:0002193!1.33e-15!48;UBERON:0002390!3.13e-15!45;UBERON:0003061!3.13e-15!45;UBERON:0002405!3.04e-14!70;UBERON:0004177!9.81e-11!29;UBERON:0005057!3.48e-09!51;UBERON:0002370!1.28e-08!23;UBERON:0000974!1.28e-08!23;UBERON:0004807!1.28e-08!23;UBERON:0005058!1.28e-08!23;UBERON:0003351!1.28e-08!23;UBERON:0009113!1.28e-08!23;UBERON:0003295!1.28e-08!23;UBERON:0009722!1.28e-08!23;UBERON:0005562!1.28e-08!23;UBERON:0007690!1.28e-08!23;UBERON:0003408!4.43e-08!24;UBERON:0006562!5.06e-08!24;UBERON:0001557!5.06e-08!24;UBERON:0001042!5.06e-08!24;UBERON:0008814!5.06e-08!24;UBERON:0009145!5.06e-08!24;UBERON:0003081!1.69e-07!88;UBERON:0000926!4.76e-07!193;UBERON:0004120!4.76e-07!193;UBERON:0006603!4.76e-07!193 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.56e-16,48;UBERON:0002405,3.56e-16,48;UBERON:0002390,8.52e-16,45;UBERON:0003061,8.52e-16,45;UBERON:0004177,2.23e-11,29;UBERON:0005057,2.23e-11,29;UBERON:0000926,1.56e-09,120;UBERON:0004120,1.56e-09,120;UBERON:0006603,1.56e-09,120;UBERON:0000077,3.13e-09,35;UBERON:0002370,3.31e-09,23;UBERON:0000974,3.31e-09,23;UBERON:0004807,3.31e-09,23;UBERON:0005058,3.31e-09,23;UBERON:0003351,3.31e-09,23;UBERON:0009113,3.31e-09,23;UBERON:0003295,3.31e-09,23;UBERON:0009722,3.31e-09,23;UBERON:0005562,3.31e-09,23;UBERON:0007690,3.31e-09,23;UBERON:0003408,1.24e-08,24;UBERON:0006562,1.43e-08,24;UBERON:0001557,1.43e-08,24;UBERON:0001042,1.43e-08,24;UBERON:0008814,1.43e-08,24;UBERON:0009145,1.43e-08,24 | |||
|phase1_expression=0.320297694209588,5.23463111459042,5.45999087267443,3.93203474698879,6.51164448930251,1.34303417529512,0.700837921786577,35.2506672995503,79.6864167378434,111.180650002947,39.0376967554151,37.7322312047941,33.5553430665163,33.482014126476,5.66286595086627,4.25198061518635,2.09868563438444,20.1895785829272,23.0352248457641,25.4633791078818,5.10259740906419,7.64540324246817,5.48519557191764,3.03985603307473,2.2940928106717,0.57423196411502,1.7230479846363,1.29282739611533,0,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,110.910882145281,69.5388456626182,73.8168479003056,117.058066118172,118.166868897811,100.98615343048,0.629484089877886,0.608261587317087,0.734187008646726,0,0.218025156380447,0,0,0.55994568650145,1.43752564364972,18.7916518784665,36.9934692425786,20.5017217476903,1.02903774414379,1.43266719969378,1.54701627683233,0.202316460859598,0,0.633831403506179,0,0.889294796111139,8.99899717281399,11.8663963508037,9.9467216092454,3.89480143673926,0.768436610643109,0,0,0.210324961351382,2.57085885963423,0.883474163806454,0,0,0.919218786610021,7.70811166995721,6.00130489000382,6.75868746327471,0.131886287730194,0.182975287204819,0,8.37548997004143,5.06486349028512,6.41752640662602,1.47314292736834,1.85083185038834,0.745597783301202,0.681535739998656,0.755715601067855,18.8411917656091,1.72084775396277,0,0,0,0,5.19644354487482,2.38602451609281,1.29893002301434,1.41335829804136,0.704217098883403,0,2.54805239706646,0,0.432982082022428,0.253359865475099,1.51657333504435,3.76806803072898,19.6792791571851,3.26572705942614,1.38788261412909,2.13125834818499,2.30615497256059,5.12456977878917,5.52666923537813,3.26733137457156,0,4.48258006451726,28.307537662396,2.10296904931632,13.2504911076236,9.69750506270444,3.72783522436244,9.36898550436951,4.81727425670947,4.85368404896324,24.08284002569,25.7958174327165,20.7124470129095,10.7849260371472,17.8425235099264,1.25654352112864,6.25767552692195,2.30143911597297,7.89594569326328,4.86723789203273,1.42575109390443,14.9288364732112,10.6143558542143,1.47309299120532,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0.640568601424249,0.187403449119458,0.258703370739016,0.215567992932842,0.567318240503458,0.703804496655795,1.09597866213787,0.834141747676794,0.348252166522167,1.23469281844766,2.18937693500343,28.7907406798426,33.7125758320277,31.5421484329108,2.07125772535502,2.34526059981096,2.52086886045421,2.3674473558521,1.96764231747404,1.54267112887378,2.55787339225449,2.95100741539581,1.5179494507732,0.987359099480883,0.985004784474571,1.78351381000883,1.60819986167866,2.41505126820156,0.939444931322602,8.41159794256509,0.205809224758569,9.58214470653014,14.2803305998314,0.213288250535234,1.16118335930219,1.28867461322093,1.61346819698674,0.444756087689741,0.951128130562796,6.64340686162316,0.329397909448022,1.75934646160189,1.39269530428806,1.75467678407208,5.39291645192533,3.8904848977445,5.57595565112228,2.0863469104839,1.25673363870702,1.1270773567308,1.62921062276251,3.10323979468201,1.82353131714828,3.22506339333712,4.87113488332687,3.45397201251025,3.33172342588861,2.07516838961004,2.33583148002532,2.94838492669805,2.9232074610031,3.65148218499305,5.54707467430559,6.62027214631691,7.19240343627027,6.80967952455149,6.31491250332587,8.62609239164127,4.46569137202204,4.99260276983297,3.53610429125956,2.33216637578486,3.85954817090694,7.39012760666419,2.4633883530163,2.93336957595647,1.52770577197669,1.17345124144251,1.17254380209271,0.714130922658041,2.14647012643579,2.20689201748667,1.10732344824387,3.02964060449226,2.78567635016755,4.14443956478149,3.61622646453779,4.52373851817817,13.5976420954677,1.96705709207614,1.65562047782839,22.6376331882787,13.83097901788,0.327869890753351,1.51482556322624,0.631016438832513,1.17131623288992,0.430846795465598,0.955875191810208,0.891194696329576,0.566153061577665,0,1.46127928955656,0.790575555893047,4.17717711348349,5.25178315270594,1.06839362200353,1.46598263418218,6.10389454998381,1.32745138339963,0.971122544619926,1.209294227859,1.50884063804718,1.77181135728464,0.922305443831782,0.516856586336442,1.81766864738753,1.42598951353889,1.8962205476149,2.10837217149998,0,0.340439605753788,0.540183282093931,0.646793418913773,0.857348140126369,0.709360934569094,0.356737635204141,1.15184314421485,0,0.704015124191131,0.63549621259146,1.10264199027481,2.30840754118072,0.807322133479528,0.603129249281559,0.596861720015682,1.14898629821543,2.04036585640896,23.5490133553347,14.3531539870196,6.19160603889667,9.25972636848558,9.04168593622517,10.66214976224,11.6676868335327,38.5851036086052,38.7665522936533,34.6881934249104,0,0.474503990371703,1.42323626988794,1.83609079397062,1.67270636811575,1.31017538247707,1.48350781023303,1.57041565878138,0.523511883968059,1.03691978633434,1.24267862617385,13.5286305284206,2.69129782879162,1.15820943319968,1.94451188344048,3.09983576346555,3.71703476079712,6.10257640957921,5.7289929331338,7.8644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| ||
|short_description=p2@Pfkfb3 | |short_description=p2@Pfkfb3 | ||
}} | }} |
Latest revision as of 00:02, 2 October 2015
Short description: | p2@Pfkfb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pfkfb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_NM_001177758, uc008iih.2_5end |
EntrezGene: | Pfkfb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.42e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.42e-08 | 32 |
hematopoietic stem cell | 1.42e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.42e-08 | 32 |
lymphoid lineage restricted progenitor cell | 6.17e-08 | 12 |
T cell | 1.82e-07 | 11 |
pro-T cell | 1.82e-07 | 11 |
mature alpha-beta T cell | 3.71e-07 | 9 |
alpha-beta T cell | 3.71e-07 | 9 |
immature T cell | 3.71e-07 | 9 |
mature T cell | 3.71e-07 | 9 |
immature alpha-beta T cell | 3.71e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.56e-16 | 48 |
immune system | 3.56e-16 | 48 |
hematopoietic system | 8.52e-16 | 45 |
blood island | 8.52e-16 | 45 |
hemopoietic organ | 2.23e-11 | 29 |
immune organ | 2.23e-11 | 29 |
mesoderm | 1.56e-09 | 120 |
mesoderm-derived structure | 1.56e-09 | 120 |
presumptive mesoderm | 1.56e-09 | 120 |
mixed endoderm/mesoderm-derived structure | 3.13e-09 | 35 |
thymus | 3.31e-09 | 23 |
neck | 3.31e-09 | 23 |
respiratory system epithelium | 3.31e-09 | 23 |
hemolymphoid system gland | 3.31e-09 | 23 |
pharyngeal epithelium | 3.31e-09 | 23 |
thymic region | 3.31e-09 | 23 |
pharyngeal gland | 3.31e-09 | 23 |
entire pharyngeal arch endoderm | 3.31e-09 | 23 |
thymus primordium | 3.31e-09 | 23 |
early pharyngeal endoderm | 3.31e-09 | 23 |
gland of gut | 1.24e-08 | 24 |
pharynx | 1.43e-08 | 24 |
upper respiratory tract | 1.43e-08 | 24 |
chordate pharynx | 1.43e-08 | 24 |
pharyngeal arch system | 1.43e-08 | 24 |
pharyngeal region of foregut | 1.43e-08 | 24 |