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FFCP PHASE1:Mm9::chr16:41533026..41533085,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268890
|EntrezGene=268890
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8BLK3
|UniProt=Q8BLK3
|association_with_transcript=55bp_to_ENSMUST00000078873_5end
|association_with_transcript=55bp_to_ENSMUST00000078873_5end
|cluster_id=chr16:41533026..41533085,+
|description=CAGE_peak_3_at_Lsamp_5end
|description=CAGE_peak_3_at_Lsamp_5end
|id=chr16:41533026..41533085,+
|id=chr16:41533026..41533085,+
|ontology_enrichment_celltype=CL:0000117!5.76e-13!23;CL:0000337!5.76e-13!23;CL:0000540!6.71e-13!33;CL:0000047!6.71e-13!33;CL:0000031!6.71e-13!33;CL:0000404!6.71e-13!33;CL:0000221!4.83e-11!44;CL:0000133!4.83e-11!44;CL:0002319!1.36e-10!43;CL:0000393!2.66e-09!39;CL:0000211!2.66e-09!39;CL:0000055!1.82e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.15e-15,23;CL:0000337,1.15e-15,23;CL:0000540,1.47e-14,33;CL:0000047,1.47e-14,33;CL:0000031,1.47e-14,33;CL:0000404,1.47e-14,33;CL:0000221,1.44e-11,44;CL:0000133,1.44e-11,44;CL:0002319,4.90e-11,43;CL:0000393,1.53e-10,39;CL:0000211,1.53e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.13e-29!73;UBERON:0005743!1.13e-29!73;UBERON:0000073!3.08e-28!75;UBERON:0001016!3.08e-28!75;UBERON:0004121!4.20e-28!102;UBERON:0000924!4.20e-28!102;UBERON:0006601!4.20e-28!102;UBERON:0002346!2.76e-27!71;UBERON:0003075!2.76e-27!71;UBERON:0007284!2.76e-27!71;UBERON:0000033!4.09e-26!63;UBERON:0001049!1.70e-24!52;UBERON:0005068!1.70e-24!52;UBERON:0006241!1.70e-24!52;UBERON:0007135!1.70e-24!52;UBERON:0000955!5.21e-23!50;UBERON:0006238!5.21e-23!50;UBERON:0003056!1.52e-22!49;UBERON:0002616!1.92e-22!49;UBERON:0003080!1.14e-18!40;UBERON:0002020!4.31e-18!34;UBERON:0002780!6.01e-18!39;UBERON:0001890!6.01e-18!39;UBERON:0006240!6.01e-18!39;UBERON:0002791!9.24e-15!29;UBERON:0003528!9.24e-15!29;UBERON:0001893!9.24e-15!29;UBERON:0000153!1.60e-13!94;UBERON:0007811!1.45e-12!86;UBERON:0000956!2.22e-10!21;UBERON:0001869!2.22e-10!21;UBERON:0000203!2.22e-10!21;UBERON:0002619!3.39e-09!17;UBERON:0002021!5.02e-08!10;UBERON:0000411!5.02e-08!10;UBERON:0001950!5.02e-08!10;UBERON:0000468!1.22e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.02e-33,73;UBERON:0002346,7.47e-33,64;UBERON:0003075,7.47e-33,64;UBERON:0007284,7.47e-33,64;UBERON:0001016,8.65e-32,75;UBERON:0004121,1.46e-31,95;UBERON:0000924,1.46e-31,95;UBERON:0006601,1.46e-31,95;UBERON:0000073,1.98e-30,54;UBERON:0010371,3.58e-29,73;UBERON:0001049,1.42e-28,52;UBERON:0005068,1.42e-28,52;UBERON:0006241,1.42e-28,52;UBERON:0007135,1.42e-28,52;UBERON:0003056,7.37e-26,49;UBERON:0000955,3.24e-24,47;UBERON:0006238,3.24e-24,47;UBERON:0002616,1.55e-23,46;UBERON:0003080,4.40e-21,40;UBERON:0002020,9.07e-21,34;UBERON:0002780,3.30e-20,39;UBERON:0001890,3.30e-20,39;UBERON:0006240,3.30e-20,39;UBERON:0010314,5.72e-18,92;UBERON:0003528,1.07e-16,29;UBERON:0002791,1.07e-16,29;UBERON:0001893,1.07e-16,29;UBERON:0000956,2.43e-11,21;UBERON:0001869,2.43e-11,21;UBERON:0000203,2.43e-11,21;UBERON:0002619,7.56e-10,17;UBERON:0002021,1.47e-09,10;UBERON:0000411,1.47e-09,10;UBERON:0001950,1.47e-09,10;UBERON:0003076,6.58e-08,12;UBERON:0003057,6.58e-08,12
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.439372365468944,0.58328969722285,0.839918529752175,0,0,0,0,0.257259436035947,0,0.515672092277442,13.3528864167335,14.8117474196169,13.9442908771359,0,0,0,0,0,4.79360176829448,6.53171119046643,2.7996195323289,3.78016627328734,3.36519938162211,22.2807767834967,24.2955395046775,8.45186514583183,5.46319184803947,3.67687514644008,30.8324466798288,16.7270412891596,14.8998337258556,12.3973110466382,12.5338071735301,13.022834263919,12.8424179540635,23.6360296213306,14.9742282821274,32.7037729875771,20.3591503542717,10.9975673036927,0,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,10.9857867425811,0,0,0,0,0,0,0.5709193985953,0,0.593768556259299,0.693941307064543,1.21786191324856,0.691846491768175,0.60289056221049,0.940709657085638,0.251333182659351,0,0,0,0,0.220841518460394,0,0,24.59358694897,24.5052646971742,0.255457055208591,0,0,0,23.9665023047716,13.7250180845588,9.1727677042391,15.9918374576894,22.5029602450691,16.4152555202052,22.7137768294861,0.407357455401265,0.124406970610093,0.252722758433675,1.47309299120532,3.3831315170303,4.82794419310293,7.38254732201932,8.74087943447147,12.9949713379036,11.2740073850668,7.49613796477831,11.6416516832557,0.862271971731369,4.16033376369202,4.39877810409872,1.7535658594206,3.33656699070717,2.089512999133,1.23469281844766,4.17971960318836,0,0,0,0,0.469052119962192,0.720248245844059,0.946978942340841,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,0.700592054203017,0.493679549740441,0.656669856316381,0.324275238183423,0.584799949701329,0.439100230582101,0.268412837520744,10.9350773253346,16.0531195311684,0,0,2.98603550749328,2.09013004674395,2.44848176511977,1.4117846723634,1.11189021922435,0.380451252225118,0,0.494096864172033,0.754005626400808,1.1937388322469,0.19496408711912,0,0,0.199141273254367,1.13800740571849,2.85621281524322,2.25415471346161,2.64746726198909,0.775809948670503,0.841629838683823,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,14.6101036888891,20.9808919000044,0,0.252470927204373,1.57754109708128,0.390438744296638,1.29254038639679,1.43381278771531,3.34198011123591,2.54768877709949,1.61924280669958,0.584511715822624,1.18586333383957,11.8888887076069,0.567760340833074,0.890328018336276,1.30309567482861,3.29940245945071,0,2.42780636154981,0.906970670894253,0.754420319023592,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,4.32146625675145,3.23396709456886,6.21577401591618,4.78818630834139,3.74574516964348,4.27827453565514,3.04464949114599,0,0,0.220528398054962,0.16488625294148,1.13025098687134,0.542816324353403,0.596861720015682,0.820704498725306,0,13.9068976507882,0,3.714963623338,2.40752885580625,0,0,0,0,0,0,0,2.05618395827738,1.82987520414164,2.48412283890143,2.09088296014469,2.18362563746178,1.21377911746339,0.661227645802687,0.785267825952089,0,0,0,0,0.330916980914195,0.388902376688095,0.516639293910924,0.337912250981556,0.821500670520278,0.781226309063701,0.209718688851422,0,0,0,0.608175645870493,0.410843828659309,0.129920822977795,0.537080087002444,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.375364950902364,2.56412273974171,0.643105137237198,0,32.1908550291728,27.6195141904306,32.6550442660456,23.5438859810852,15.7568979547248,20.3956352295219,16.8755625057951,17.5625269257446,20.3914084042892,21.7459330935764,1.55681021376265,6.3843979744165,5.80494259564056,2.43106717068294,0.838452650511929,0.551530525350042,3.11145418922261,3.7086310303001,4.1719497246936,4.29585259998456,3.04175159868288,4.71565853465191,3.83930180626518,3.71345883948242,3.27382173046996,1.90517476513229,3.70829843023538,2.89363830695558,5.35711671044299,4.26876868389752,2.40008476669791,3.72699192934609,4.5302876089991,3.48831399917588,3.67026583619789,3.89227196301712,2.92684756596436,3.6829759601298,4.75314398460516,2.80571135828869,4.38949567059444,3.74317033027141,2.86461730218783,2.47898945897546,3.08650577569826,3.74715866906919,3.74290573512653,2.36358159453128,1.91288332068843,1.76473135295612,0.695603506861264
|phase1_expression=5.12476310735341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.439372365468944,0.58328969722285,0.839918529752175,0,0,0,0,0.257259436035947,0,0.515672092277442,13.3528864167335,14.8117474196169,13.9442908771359,0,0,0,0,0,4.79360176829448,6.53171119046643,2.7996195323289,3.78016627328734,3.36519938162211,22.2807767834967,24.2955395046775,8.45186514583183,5.46319184803947,3.67687514644008,30.8324466798288,16.7270412891596,14.8998337258556,12.3973110466382,12.5338071735301,13.022834263919,12.8424179540635,23.6360296213306,14.9742282821274,32.7037729875771,20.3591503542717,10.9975673036927,0,0.151143120213571,0,0,0,0,0,0,0.983110940922263,0,0,0,10.9857867425811,0,0,0,0,0,0,0.5709193985953,0,0.593768556259299,0.693941307064543,1.21786191324856,0.691846491768175,0.60289056221049,0.940709657085638,0.251333182659351,0,0,0,0,0.220841518460394,0,0,24.59358694897,24.5052646971742,0.255457055208591,0,0,0,23.9665023047716,13.7250180845588,9.1727677042391,15.9918374576894,22.5029602450691,16.4152555202052,22.7137768294861,0.407357455401265,0.124406970610093,0.252722758433675,1.47309299120532,3.3831315170303,4.82794419310293,7.38254732201932,8.74087943447147,12.9949713379036,11.2740073850668,7.49613796477831,11.6416516832557,0.862271971731369,4.16033376369202,4.39877810409872,1.7535658594206,3.33656699070717,2.089512999133,1.23469281844766,4.17971960318836,0,0,0,0,0.469052119962192,0.720248245844059,0.946978942340841,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,0.700592054203017,0.493679549740441,0.656669856316381,0.324275238183423,0.584799949701329,0.439100230582101,0.268412837520744,10.9350773253346,16.0531195311684,0,0,2.98603550749328,2.09013004674395,2.44848176511977,1.4117846723634,1.11189021922435,0.380451252225118,0,0.494096864172033,0.754005626400808,1.1937388322469,0.19496408711912,0,0,0.199141273254367,1.13800740571849,2.85621281524322,2.25415471346161,2.64746726198909,0.775809948670503,0.841629838683823,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.162964976442026,0,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,14.6101036888891,20.9808919000044,0,0.252470927204373,1.57754109708128,0.390438744296638,1.29254038639679,1.43381278771531,3.34198011123591,2.54768877709949,1.61924280669958,0.584511715822624,1.18586333383957,11.8888887076069,0.567760340833074,0.890328018336276,1.30309567482861,3.29940245945071,0,2.42780636154981,0.906970670894253,0.754420319023592,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,4.32146625675145,3.23396709456886,6.21577401591618,4.78818630834139,3.74574516964348,4.27827453565514,3.04464949114599,0,0,0.220528398054962,0.16488625294148,1.13025098687134,0.542816324353403,0.596861720015682,0.820704498725306,0,13.9068976507882,0,3.714963623338,2.40752885580625,0,0,0,0,0,0,0,2.05618395827738,1.82987520414164,2.48412283890143,2.09088296014469,2.18362563746178,1.21377911746339,0.661227645802687,0.785267825952089,0,0,0,0,0.330916980914195,0.388902376688095,0.516639293910924,0.337912250981556,0.821500670520278,0.781226309063701,0.209718688851422,0,0,0,0.608175645870493,0.410843828659309,0.129920822977795,0.537080087002444,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0.375364950902364,2.56412273974171,0.643105137237198,0,32.1908550291728,27.6195141904306,32.6550442660456,23.5438859810852,15.7568979547248,20.3956352295219,16.8755625057951,17.5625269257446,20.3914084042892,21.7459330935764,1.55681021376265,6.3843979744165,5.80494259564056,2.43106717068294,0.838452650511929,0.551530525350042,3.11145418922261,3.7086310303001,4.1719497246936,4.29585259998456,3.04175159868288,4.71565853465191,3.83930180626518,3.71345883948242,3.27382173046996,1.90517476513229,3.70829843023538,2.89363830695558,5.35711671044299,4.26876868389752,2.40008476669791,3.72699192934609,4.5302876089991,3.48831399917588,3.67026583619789,3.89227196301712,2.92684756596436,3.6829759601298,4.75314398460516,2.80571135828869,4.38949567059444,3.74317033027141,2.86461730218783,2.47898945897546,3.08650577569826,3.74715866906919,3.74290573512653,2.36358159453128,1.91288332068843,1.76473135295612,0.695603506861264
|short_description=p3@Lsamp
|short_description=p3@Lsamp
}}
}}

Latest revision as of 00:26, 2 October 2015

Short description:p3@Lsamp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lsamp_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 55bp_to_ENSMUST00000078873_5end
EntrezGene:Lsamp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lsamp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C313.35
Mouse Granule cells, donor2.CNhs12357.11731-123E314.81
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.80
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.53
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D632.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F620.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.59
cerebellum, neonate N30.CNhs11135.1395-42I224.51
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A423.97
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F19.17
cortex, adult.CNhs10473.12-14D515.99
cortex, neonate N30.CNhs11107.1392-42F222.50
diencephalon, adult.CNhs10482.20-12F216.42
diencephalon, neonate N30.CNhs11201.1388-42B222.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E24.83
eyeball, embryo E15.CNhs10593.426-16C97.38
eyeball, embryo E17.CNhs11023.1261-18D48.74
eyeball, neonate N00.CNhs11207.633-15C612.99
eyeball, neonate N01.CNhs11140.1532-43E711.27
eyeball, neonate N02.CNhs11205.1551-44G87.50
eyeball, neonate N16.CNhs11188.777-19A211.64
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I64.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G116.05
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.61
medulla oblongata, neonate N30.CNhs11200.1396-42A320.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I911.89
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E64.32
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A56.22
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C913.91
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C13.71
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.54
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A820.39
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A921.75
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B33.74
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.15e-1523
neuroblast (sensu Vertebrata)1.15e-1523
neuron1.47e-1433
neuronal stem cell1.47e-1433
neuroblast1.47e-1433
electrically signaling cell1.47e-1433
ectodermal cell1.44e-1144
neurectodermal cell1.44e-1144
neural cell4.90e-1143
electrically responsive cell1.53e-1039
electrically active cell1.53e-1039

Uber anatomy
Ontology termp-valuen
central nervous system2.02e-3373
neurectoderm7.47e-3364
neural plate7.47e-3364
presumptive neural plate7.47e-3364
nervous system8.65e-3275
ectoderm-derived structure1.46e-3195
ectoderm1.46e-3195
presumptive ectoderm1.46e-3195
regional part of nervous system1.98e-3054
ecto-epithelium3.58e-2973
neural tube1.42e-2852
neural rod1.42e-2852
future spinal cord1.42e-2852
neural keel1.42e-2852
pre-chordal neural plate7.37e-2649
brain3.24e-2447
future brain3.24e-2447
regional part of brain1.55e-2346
anterior neural tube4.40e-2140
gray matter9.07e-2134
regional part of forebrain3.30e-2039
forebrain3.30e-2039
future forebrain3.30e-2039
structure with developmental contribution from neural crest5.72e-1892
brain grey matter1.07e-1629
regional part of telencephalon1.07e-1629
telencephalon1.07e-1629
cerebral cortex2.43e-1121
cerebral hemisphere2.43e-1121
pallium2.43e-1121
regional part of cerebral cortex7.56e-1017
occipital lobe1.47e-0910
visual cortex1.47e-0910
neocortex1.47e-0910
posterior neural tube6.58e-0812
chordal neural plate6.58e-0812
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