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FFCP PHASE1:Mm9::chr16:41533441..41533473,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268890
|EntrezGene=268890
|HGNC=
|HGNC=
|MCL_coexpression_id=121
|TSSclassifier=NA
|UniProt=Q8BLK3
|UniProt=Q8BLK3
|association_with_transcript=0bp_to_NM_175548,uc007zfs.1,uc007zft.1_5end
|association_with_transcript=0bp_to_NM_175548,uc007zfs.1,uc007zft.1_5end
|cluster_id=chr16:41533441..41533473,+
|description=CAGE_peak_5_at_Lsamp_5end
|description=CAGE_peak_5_at_Lsamp_5end
|id=chr16:41533441..41533473,+
|id=chr16:41533441..41533473,+
|ontology_enrichment_celltype=CL:0000221!3.69e-09!44;CL:0000133!3.69e-09!44;CL:0000117!4.73e-09!23;CL:0000337!4.73e-09!23;CL:0002319!9.39e-09!43;CL:0000540!3.33e-07!33;CL:0000047!3.33e-07!33;CL:0000031!3.33e-07!33;CL:0000404!3.33e-07!33
|ontology_enrichment_celltype=CL:0000221!3.69e-09!44;CL:0000133!3.69e-09!44;CL:0000117!4.73e-09!23;CL:0000337!4.73e-09!23;CL:0002319!9.39e-09!43;CL:0000540!3.33e-07!33;CL:0000047!3.33e-07!33;CL:0000031!3.33e-07!33;CL:0000404!3.33e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000221,2.84e-09,44;CL:0000133,2.84e-09,44;CL:0000117,7.27e-09,23;CL:0000337,7.27e-09,23;CL:0002319,1.10e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.23e-26!63;UBERON:0004121!2.73e-26!102;UBERON:0000924!2.73e-26!102;UBERON:0006601!2.73e-26!102;UBERON:0001017!1.55e-24!73;UBERON:0005743!1.55e-24!73;UBERON:0000073!4.78e-24!75;UBERON:0001016!4.78e-24!75;UBERON:0001049!3.82e-22!52;UBERON:0005068!3.82e-22!52;UBERON:0006241!3.82e-22!52;UBERON:0007135!3.82e-22!52;UBERON:0002346!9.64e-22!71;UBERON:0003075!9.64e-22!71;UBERON:0007284!9.64e-22!71;UBERON:0000955!5.50e-21!50;UBERON:0006238!5.50e-21!50;UBERON:0002616!2.63e-20!49;UBERON:0003056!2.43e-19!49;UBERON:0002020!6.65e-17!34;UBERON:0003080!1.21e-15!40;UBERON:0000153!4.94e-15!94;UBERON:0002780!5.96e-15!39;UBERON:0001890!5.96e-15!39;UBERON:0006240!5.96e-15!39;UBERON:0007811!4.38e-14!86;UBERON:0002791!7.54e-14!29;UBERON:0003528!7.54e-14!29;UBERON:0001893!7.54e-14!29;UBERON:0000956!1.21e-09!21;UBERON:0001869!1.21e-09!21;UBERON:0000203!1.21e-09!21;UBERON:0002619!3.02e-09!17;UBERON:0002021!1.46e-07!10;UBERON:0000411!1.46e-07!10;UBERON:0001950!1.46e-07!10;UBERON:0003076!2.96e-07!12;UBERON:0003057!2.96e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.29e-30,95;UBERON:0000924,1.29e-30,95;UBERON:0006601,1.29e-30,95;UBERON:0001017,3.88e-29,73;UBERON:0001016,6.03e-28,75;UBERON:0002346,1.10e-27,64;UBERON:0003075,1.10e-27,64;UBERON:0007284,1.10e-27,64;UBERON:0000073,1.55e-27,54;UBERON:0010371,2.09e-26,73;UBERON:0001049,2.48e-25,52;UBERON:0005068,2.48e-25,52;UBERON:0006241,2.48e-25,52;UBERON:0007135,2.48e-25,52;UBERON:0010314,7.30e-22,92;UBERON:0002020,9.59e-21,34;UBERON:0000955,2.89e-20,47;UBERON:0006238,2.89e-20,47;UBERON:0002616,2.93e-19,46;UBERON:0003056,9.34e-19,49;UBERON:0003528,8.56e-16,29;UBERON:0002791,8.56e-16,29;UBERON:0001893,8.56e-16,29;UBERON:0003080,9.13e-15,40;UBERON:0002780,8.97e-14,39;UBERON:0001890,8.97e-14,39;UBERON:0006240,8.97e-14,39;UBERON:0003076,3.07e-12,12;UBERON:0003057,3.07e-12,12;UBERON:0002021,4.59e-12,10;UBERON:0000411,4.59e-12,10;UBERON:0001950,4.59e-12,10;UBERON:0004111,1.97e-10,122;UBERON:0002619,2.24e-10,17;UBERON:0000956,3.94e-09,21;UBERON:0001869,3.94e-09,21;UBERON:0000203,3.94e-09,21;UBERON:0000025,1.17e-08,114;UBERON:0002420,1.50e-08,8;UBERON:0007245,1.50e-08,8;UBERON:0010009,1.50e-08,8;UBERON:0010011,1.50e-08,8;UBERON:0000454,1.50e-08,8;UBERON:0002240,8.58e-08,6;UBERON:0005174,8.58e-08,6;UBERON:0001137,8.58e-08,6;UBERON:0000020,4.33e-07,12;UBERON:0001032,4.33e-07,12;UBERON:0004456,4.33e-07,12
|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.439372365468944,1.74986909166855,1.1198913730029,2.87505128729943,0,0,0,0,0,0,1.82084814773638,0,0.633831403506179,0,0,0,0,0,2.39680088414724,3.45796474789399,0.414758449233911,0.675029691658453,0.420649922702764,10.5690864229407,8.39300455616131,0.734944795289724,0.766763768145891,0.919218786610021,6.60695285996332,14.939418555967,12.2885226604995,1.58263545276233,1.46380229763855,1.04182674111352,15.9134309430787,14.069065250792,14.6686317865738,4.41942878210502,6.12198227436143,2.60959224155421,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,1.97180787687353,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0.890652834388949,0.346970653532272,0,0,0.301445281105245,0,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0,0.969750506270444,0,30.1564220921894,26.8091784721222,0,0,0,0,12.4326230706003,5.49000723382352,2.1361239859187,7.64827008846016,8.95004100656157,16.4152555202052,10.8701646255398,0.509196819251581,0.248813941220186,0.252722758433675,1.47309299120532,0.520481771850815,0.919608417733892,2.52086981727489,1.05493372485001,3.26575195926374,1.7935920839879,2.15513966487376,4.13925393182425,0.215567992932842,0.945530400839096,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,2.05782136407943,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0,0,0,0.116765342367169,0.493679549740441,0.492502392237286,1.21603214318784,1.16959989940266,1.53685080703735,1.07365135008297,11.3556572224629,3.39585220851639,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,0.569003702859245,0.228497025219458,2.25415471346161,0,0,0.420814919341911,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0.630540576424764,0.44292937929755,0.318909537314974,0,0.518054945597687,0,0,0,0,0,16.8578119487182,16.2924244363162,0,0.252470927204373,0,0,0.430846795465598,0,0.668396022247182,1.98153571552183,0,0.292255857911312,0.395287777946524,8.03303291054518,0.851640511249612,0.178065603667255,1.14020871547503,2.47455184458803,1.32745138339963,0,0.604647113929502,0.188605079755898,0,0,0,0,0,0.948110273807448,0,0,1.02131881726136,0,0.517434735131018,0.643011105094777,0.709360934569094,0.535106452806212,0.987294123612726,0.304464949114599,0,0,0,0.65954501176592,0.484393280087717,0.904693873922338,1.07435109602823,0.328281799490123,0,15.3903000668723,0,1.23832120777933,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.432021363287205,0,0,0.269728692769641,0.826534557253359,1.04702376793612,0.518459893167171,0.621339313086926,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.911430693907651,0.629156066554265,0,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0.537080087002444,0.198681354781265,0.240390899039938,0,0,0,0,0,0.0962118416403295,0,1.36038230169127,0,0,0,1.54551675225752,0.187682475451182,1.83151624267265,1.50057865355346,0,5.64751842617067,5.9842280745933,8.02053718815155,7.90524638780963,6.16574267793578,9.82012066606611,11.4753825039407,5.85417564191487,5.43770890781046,12.4262474820437,0.103787347584177,1.19707462020309,0,0,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.754505365544305,0.842773567228942,0.576226371643824,1.20614484806788,0.952587382566147,1.0429589335037,0.578727661391115,1.64834360321323,1.47198920134397,0.685738504770831,1.24233064311536,0.953744759789284,0.581385666529314,0.941093804153306,0.423073039458382,0.365855945745545,0.789209134313529,0.814824683075171,0,0.949080144993393,0.985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,2.49810577937946,0.233931608445408,0.214871054048298,0.956441660344217,1.76473135295612,0.695603506861264
|phase1_expression=3.36312578920067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,0.439372365468944,1.74986909166855,1.1198913730029,2.87505128729943,0,0,0,0,0,0,1.82084814773638,0,0.633831403506179,0,0,0,0,0,2.39680088414724,3.45796474789399,0.414758449233911,0.675029691658453,0.420649922702764,10.5690864229407,8.39300455616131,0.734944795289724,0.766763768145891,0.919218786610021,6.60695285996332,14.939418555967,12.2885226604995,1.58263545276233,1.46380229763855,1.04182674111352,15.9134309430787,14.069065250792,14.6686317865738,4.41942878210502,6.12198227436143,2.60959224155421,0.151452386666368,0.226714680320357,0,0,0,0,0,0,0.842666520790511,0,0,0,1.97180787687353,0,0,0,0,0,0,0.68510327831436,0.258937883647172,0.890652834388949,0.346970653532272,0,0,0.301445281105245,0,0.251333182659351,0,0.289198713839823,0,0.323533699894818,0,0.969750506270444,0,30.1564220921894,26.8091784721222,0,0,0,0,12.4326230706003,5.49000723382352,2.1361239859187,7.64827008846016,8.95004100656157,16.4152555202052,10.8701646255398,0.509196819251581,0.248813941220186,0.252722758433675,1.47309299120532,0.520481771850815,0.919608417733892,2.52086981727489,1.05493372485001,3.26575195926374,1.7935920839879,2.15513966487376,4.13925393182425,0.215567992932842,0.945530400839096,0.351902248327898,0.43839146485515,0.556094498451196,0.348252166522167,2.05782136407943,0.199034266818493,0,0,0,0,0,0,0.473489471170421,0.196764231747404,0,0,0,0.116765342367169,0.493679549740441,0.492502392237286,1.21603214318784,1.16959989940266,1.53685080703735,1.07365135008297,11.3556572224629,3.39585220851639,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0.397912944082302,0.38992817423824,0.898819408654221,0,0.199141273254367,0.569003702859245,0.228497025219458,2.25415471346161,0,0,0.420814919341911,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0.630540576424764,0.44292937929755,0.318909537314974,0,0.518054945597687,0,0,0,0,0,16.8578119487182,16.2924244363162,0,0.252470927204373,0,0,0.430846795465598,0,0.668396022247182,1.98153571552183,0,0.292255857911312,0.395287777946524,8.03303291054518,0.851640511249612,0.178065603667255,1.14020871547503,2.47455184458803,1.32745138339963,0,0.604647113929502,0.188605079755898,0,0,0,0,0,0.948110273807448,0,0,1.02131881726136,0,0.517434735131018,0.643011105094777,0.709360934569094,0.535106452806212,0.987294123612726,0.304464949114599,0,0,0,0.65954501176592,0.484393280087717,0.904693873922338,1.07435109602823,0.328281799490123,0,15.3903000668723,0,1.23832120777933,0,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.432021363287205,0,0,0.269728692769641,0.826534557253359,1.04702376793612,0.518459893167171,0.621339313086926,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.911430693907651,0.629156066554265,0,0.288030006257865,0,0,0.205421914329655,0.25984164595559,0.537080087002444,0.198681354781265,0.240390899039938,0,0,0,0,0,0.0962118416403295,0,1.36038230169127,0,0,0,1.54551675225752,0.187682475451182,1.83151624267265,1.50057865355346,0,5.64751842617067,5.9842280745933,8.02053718815155,7.90524638780963,6.16574267793578,9.82012066606611,11.4753825039407,5.85417564191487,5.43770890781046,12.4262474820437,0.103787347584177,1.19707462020309,0,0,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.754505365544305,0.842773567228942,0.576226371643824,1.20614484806788,0.952587382566147,1.0429589335037,0.578727661391115,1.64834360321323,1.47198920134397,0.685738504770831,1.24233064311536,0.953744759789284,0.581385666529314,0.941093804153306,0.423073039458382,0.365855945745545,0.789209134313529,0.814824683075171,0,0.949080144993393,0.985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,2.49810577937946,0.233931608445408,0.214871054048298,0.956441660344217,1.76473135295612,0.695603506861264
|short_description=p5@Lsamp
|short_description=p5@Lsamp
}}
}}

Latest revision as of 00:27, 2 October 2015

Short description:p5@Lsamp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Lsamp_5end
Coexpression cluster:MCL_coexpression_mm9:121
Association with transcript: 0bp_to_NM_175548, uc007zfs.1, uc007zft.1_5end
EntrezGene:Lsamp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Lsamp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B230.16
cerebellum, neonate N30.CNhs11135.1395-42I226.81
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.43
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F216.42
diencephalon, neonate N30.CNhs11201.1388-42B210.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C63.27
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E811.36
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C216.86
medulla oblongata, neonate N30.CNhs11200.1396-42A316.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.39
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.91
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.84e-0944
neurectodermal cell2.84e-0944
CNS neuron (sensu Vertebrata)7.27e-0923
neuroblast (sensu Vertebrata)7.27e-0923
neural cell1.10e-0843

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure1.29e-3095
ectoderm1.29e-3095
presumptive ectoderm1.29e-3095
central nervous system3.88e-2973
nervous system6.03e-2875
neurectoderm1.10e-2764
neural plate1.10e-2764
presumptive neural plate1.10e-2764
regional part of nervous system1.55e-2754
ecto-epithelium2.09e-2673
neural tube2.48e-2552
neural rod2.48e-2552
future spinal cord2.48e-2552
neural keel2.48e-2552
structure with developmental contribution from neural crest7.30e-2292
gray matter9.59e-2134
brain2.89e-2047
future brain2.89e-2047
regional part of brain2.93e-1946
pre-chordal neural plate9.34e-1949
brain grey matter8.56e-1629
regional part of telencephalon8.56e-1629
telencephalon8.56e-1629
anterior neural tube9.13e-1540
regional part of forebrain8.97e-1439
forebrain8.97e-1439
future forebrain8.97e-1439
posterior neural tube3.07e-1212
chordal neural plate3.07e-1212
occipital lobe4.59e-1210
visual cortex4.59e-1210
neocortex4.59e-1210
anatomical conduit1.97e-10122
regional part of cerebral cortex2.24e-1017
cerebral cortex3.94e-0921
cerebral hemisphere3.94e-0921
pallium3.94e-0921
tube1.17e-08114
basal ganglion1.50e-088
nuclear complex of neuraxis1.50e-088
aggregate regional part of brain1.50e-088
collection of basal ganglia1.50e-088
cerebral subcortex1.50e-088
spinal cord8.58e-086
dorsal region element8.58e-086
dorsum8.58e-086
sense organ4.33e-0712
sensory system4.33e-0712
entire sense organ system4.33e-0712
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