FF:10150-102I6: Difference between revisions

Revision as of 14:45, 15 May 2017

Name:	medial frontal gyrus, adult, donor10252
Species:	Human (Homo sapiens)
Library ID:	CNhs12310
Sample type:	tissues
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	medial frontal gyrus
dev stage	NA
sex	female
age	76
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005747

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12310		CAGE		DRX008683		DRR009555

Accession ID Hg19

Library id		BAM		CTSS
CNhs12310		DRZ000980		DRZ002365

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.376
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.951
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.295
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0.097
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.138
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.56
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0512
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.176
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0512
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.138
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.273
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0.176
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0619
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.255
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.843
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.097
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0512
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.121
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.0512
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0784
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.057
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.787
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.0512
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.193
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.42
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0483
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0512
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0.097
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.654
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.0502
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.603
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0512
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0616
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.575
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0512
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0.328
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.468
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.547
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.0512
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.762
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	1.123
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.097
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0.118
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.211
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.0387
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.7
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.603
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0.138
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0.478
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.0512
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.603
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.0512
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12310

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0243
MA0003.1	MA0003.1	0.254
MA0004.1	MA0004.1	0.374
MA0006.1	MA0006.1	0.274
MA0007.1	MA0007.1	0.284
MA0009.1	MA0009.1	0.14
MA0014.1	MA0014.1	0.647
MA0017.1	MA0017.1	6.33837e-4
MA0018.2	MA0018.2	0.459
MA0019.1	MA0019.1	0.64
MA0024.1	MA0024.1	0.897
MA0025.1	MA0025.1	0.356
MA0027.1	MA0027.1	0.544
MA0028.1	MA0028.1	0.0574
MA0029.1	MA0029.1	0.0207
MA0030.1	MA0030.1	0.55
MA0031.1	MA0031.1	0.954
MA0035.2	MA0035.2	0.00457
MA0038.1	MA0038.1	0.366
MA0039.2	MA0039.2	0.142
MA0040.1	MA0040.1	0.793
MA0041.1	MA0041.1	0.513
MA0042.1	MA0042.1	0.961
MA0043.1	MA0043.1	0.97
MA0046.1	MA0046.1	0.00197
MA0047.2	MA0047.2	0.0353
MA0048.1	MA0048.1	0.136
MA0050.1	MA0050.1	0.0382
MA0051.1	MA0051.1	0.0907
MA0052.1	MA0052.1	0.925
MA0055.1	MA0055.1	9.97132e-4
MA0057.1	MA0057.1	0.851
MA0058.1	MA0058.1	0.316
MA0059.1	MA0059.1	0.0704
MA0060.1	MA0060.1	0.713
MA0061.1	MA0061.1	0.00716
MA0062.2	MA0062.2	0.00235
MA0065.2	MA0065.2	1.62703e-4
MA0066.1	MA0066.1	0.00903
MA0067.1	MA0067.1	0.94
MA0068.1	MA0068.1	0.885
MA0069.1	MA0069.1	0.526
MA0070.1	MA0070.1	0.493
MA0071.1	MA0071.1	0.0166
MA0072.1	MA0072.1	0.265
MA0073.1	MA0073.1	0.379
MA0074.1	MA0074.1	0.205
MA0076.1	MA0076.1	0.0949
MA0077.1	MA0077.1	0.251
MA0078.1	MA0078.1	0.7
MA0079.2	MA0079.2	0.631
MA0080.2	MA0080.2	7.23011e-8
MA0081.1	MA0081.1	0.0345
MA0083.1	MA0083.1	0.00751
MA0084.1	MA0084.1	0.761
MA0087.1	MA0087.1	0.755
MA0088.1	MA0088.1	0.194
MA0090.1	MA0090.1	0.369
MA0091.1	MA0091.1	0.477
MA0092.1	MA0092.1	0.28
MA0093.1	MA0093.1	0.386
MA0099.2	MA0099.2	5.10555e-19
MA0100.1	MA0100.1	0.569
MA0101.1	MA0101.1	0.00283
MA0102.2	MA0102.2	0.221
MA0103.1	MA0103.1	0.145
MA0104.2	MA0104.2	0.42
MA0105.1	MA0105.1	0.00158
MA0106.1	MA0106.1	0.0368
MA0107.1	MA0107.1	0.00452
MA0108.2	MA0108.2	0.162
MA0111.1	MA0111.1	0.559
MA0112.2	MA0112.2	9.35553e-4
MA0113.1	MA0113.1	0.407
MA0114.1	MA0114.1	9.78659e-4
MA0115.1	MA0115.1	0.29
MA0116.1	MA0116.1	0.00882
MA0117.1	MA0117.1	0.907
MA0119.1	MA0119.1	0.104
MA0122.1	MA0122.1	0.513
MA0124.1	MA0124.1	0.703
MA0125.1	MA0125.1	0.421
MA0131.1	MA0131.1	0.997
MA0135.1	MA0135.1	0.127
MA0136.1	MA0136.1	6.64524e-12
MA0137.2	MA0137.2	0.626
MA0138.2	MA0138.2	0.347
MA0139.1	MA0139.1	0.425
MA0140.1	MA0140.1	8.54422e-4
MA0141.1	MA0141.1	0.00255
MA0142.1	MA0142.1	0.808
MA0143.1	MA0143.1	0.83
MA0144.1	MA0144.1	0.57
MA0145.1	MA0145.1	0.16
MA0146.1	MA0146.1	0.0122
MA0147.1	MA0147.1	0.298
MA0148.1	MA0148.1	0.0547
MA0149.1	MA0149.1	0.0236
MA0150.1	MA0150.1	3.50726e-4
MA0152.1	MA0152.1	0.496
MA0153.1	MA0153.1	0.0507
MA0154.1	MA0154.1	0.0522
MA0155.1	MA0155.1	0.517
MA0156.1	MA0156.1	1.28055e-7
MA0157.1	MA0157.1	0.649
MA0159.1	MA0159.1	0.00478
MA0160.1	MA0160.1	0.00827
MA0162.1	MA0162.1	0.106
MA0163.1	MA0163.1	2.05321e-5
MA0164.1	MA0164.1	0.771
MA0258.1	MA0258.1	0.00793
MA0259.1	MA0259.1	0.818

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12310

Novel motif	Logo	P-value
1	1	0.0633
10	10	0.0542
100	100	0.293
101	101	0.45
102	102	0.866
103	103	0.117
104	104	0.144
105	105	0.113
106	106	0.0536
107	107	0.106
108	108	0.974
109	109	0.00251
11	11	0.0142
110	110	0.0498
111	111	0.161
112	112	0.413
113	113	0.556
114	114	0.157
115	115	0.885
116	116	0.163
117	117	0.011
118	118	0.12
119	119	0.173
12	12	0.503
120	120	0.221
121	121	0.332
122	122	0.914
123	123	0.597
124	124	0.114
125	125	0.164
126	126	0.0153
127	127	0.554
128	128	0.171
129	129	0.524
13	13	9.39575e-4
130	130	0.226
131	131	0.0686
132	132	0.598
133	133	0.0499
134	134	0.613
135	135	0.225
136	136	0.00179
137	137	0.943
138	138	0.964
139	139	0.114
14	14	0.793
140	140	0.41
141	141	0.612
142	142	0.763
143	143	0.0489
144	144	0.869
145	145	0.123
146	146	0.484
147	147	0.769
148	148	0.303
149	149	0.227
15	15	0.0878
150	150	0.165
151	151	0.639
152	152	0.0904
153	153	0.835
154	154	0.479
155	155	0.877
156	156	0.432
157	157	0.452
158	158	0.364
159	159	0.0316
16	16	0.0461
160	160	0.247
161	161	0.223
162	162	0.684
163	163	0.707
164	164	0.0423
165	165	0.0399
166	166	0.932
167	167	0.815
168	168	0.556
169	169	0.00944
17	17	0.134
18	18	0.127
19	19	0.185
2	2	0.891
20	20	0.127
21	21	0.0605
22	22	0.189
23	23	0.448
24	24	0.0414
25	25	0.457
26	26	1.85883e-4
27	27	0.81
28	28	0.653
29	29	0.00722
3	3	0.0494
30	30	0.962
31	31	0.888
32	32	0.0266
33	33	0.0495
34	34	0.635
35	35	0.621
36	36	0.162
37	37	0.0367
38	38	0.349
39	39	0.25
4	4	0.692
40	40	0.0281
41	41	0.293
42	42	0.245
43	43	0.12
44	44	0.168
45	45	0.682
46	46	0.0747
47	47	0.0679
48	48	0.057
49	49	0.21
5	5	0.59
50	50	0.332
51	51	0.434
52	52	0.531
53	53	0.85
54	54	0.397
55	55	0.561
56	56	0.484
57	57	0.313
58	58	0.309
59	59	0.0844
6	6	0.946
60	60	0.0803
61	61	0.0667
62	62	0.196
63	63	0.185
64	64	0.21
65	65	0.282
66	66	0.15
67	67	0.363
68	68	0.126
69	69	0.292
7	7	0.0515
70	70	0.0537
71	71	0.011
72	72	0.414
73	73	0.0299
74	74	0.922
75	75	0.0422
76	76	0.434
77	77	0.148
78	78	0.00223
79	79	0.359
8	8	0.0604
80	80	0.527
81	81	0.705
82	82	0.625
83	83	0.0663
84	84	0.671
85	85	0.248
86	86	0.237
87	87	2.09946e-4
88	88	0.795
89	89	0.392
9	9	0.37
90	90	0.0724
91	91	0.751
92	92	0.526
93	93	0.997
94	94	0.191
95	95	0.0133
96	96	0.797
97	97	0.703
98	98	0.234
99	99	0.595

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12310

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
UBERON:0002702 middle frontal gyrus

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000955 (brain)
0000200 (gyrus)
0001870 (frontal cortex)
0000956 (cerebral cortex)
0002702 (middle frontal gyrus)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000002 (in vivo cell sample)
0000001 (sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.43!269.29!TSC22D4;;chr21:34442439..34442455,+!p1@OLIG1!2.25!176.27!OLIG1;;chr9:77112244..77112262,+!p1@RORB!2.17!162.75!RORB;;chr22:38380543..38380569,-!p1@SOX10!2.15!138.96!SOX10;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.08!118.81!PEG3;;chr3:181429704..181429722,+!p1@SOX2!1.96!90.26!SOX2;;chr17:53342311..53342400,+!p1@HLF!1.94!98.78!HLF;;chr4:81118647..81118666,+!p1@PRDM8!1.90!101.78!PRDM8;;chr10:64134120..64134183,+!p1@ZNF365!1.86!85.88!ZNF365;;chr11:61520075..61520136,+!p1@C11orf9!1.82!133.58!C11orf9;;chr17:37764128..37764258,-!p1@NEUROD2!1.82!64.97!NEUROD2;;chr9:114287433..114287513,+!p1@ZNF483!1.79!150.98!ZNF483;;chr14:29235961..29236008,+!p1@FOXG1!1.79!60.34!FOXG1;;chr2:162272785..162272836,+!p1@TBR1!1.74!53.96!TBR1;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.73!53.21!SMARCE1;;chr15:80733570..80733659,+!p2@ARNT2!1.73!52.83!ARNT2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.73!52.71!POU3F3;;chr8:53322304..53322340,-!p1@ST18!1.72!51.08!ST18;;chr12:26277817..26277863,-!p2@BHLHE41!1.68!63.22!BHLHE41;;chr21:34398234..34398250,+!p1@OLIG2!1.68!46.70!OLIG2;;chr11:113930425..113930471,+!p1@ZBTB16!1.65!62.09!ZBTB16;;chr2:2334997..2335053,-!p1@MYT1L!1.65!43.57!MYT1L;;chr12:106976678..106976708,+!p2@RFX4!1.65!43.32!RFX4;;chr2:145277882..145277967,-!p3@ZEB2!1.63!71.23!ZEB2;;chr5:88178983..88179012,-!p1@MEF2C!1.60!285.44!MEF2C;;chr19:46801639..46801699,+!p1@HIF3A!1.60!38.93!HIF3A;;chr2:166326200..166326216,+!p1@CSRNP3!1.59!55.33!CSRNP3;;chr2:95963052..95963106,+!p1@KCNIP3!1.59!38.06!KCNIP3;;chr22:41763452..41763466,+!p2@TEF!1.59!37.81!TEF;;chrX:25034067..25034088,-!p1@ARX!1.59!37.81!ARX;;chr8:40755333..40755352,-!p1@ZMAT4!1.58!37.43!ZMAT4;;chr21:34442540..34442560,+!p2@OLIG1!1.57!36.43!OLIG1;;chr19:13135582..13135600,+!p3@NFIX!1.56!35.05!NFIX;;chr15:80735246..80735321,+!p3@ARNT2!1.56!34.93!ARNT2;;chr18:53070846..53070902,-!p6@TCF4!1.54!33.80!TCF4;;chr10:134599649..134599653,-!p1@NKX6-2!1.54!33.68!NKX6-2;;chr12:54779511..54779577,-!p5@ZNF385A!1.51!31.30!ZNF385A;;chr16:1031762..1031781,+!p1@SOX8!1.49!29.92!SOX8;;chr11:31832862..31832884,-!p2@PAX6!1.49!29.67!PAX6;;chr19:13135386..13135435,+!p4@NFIX!1.48!28.92!NFIX;;chr10:119302232..119302265,+!p1@EMX2!1.47!28.67!EMX2;;chr2:60781201..60781258,-!p3@BCL11A!1.45!27.42!BCL11A;;chr4:57547454..57547469,-!p1@HOPX!1.44!26.67!HOPX;;chr15:80696703..80696754,+!p1@ARNT2!1.43!34.43!ARNT2;;chr14:29236269..29236285,+!p3@FOXG1!1.42!25.54!FOXG1;;chr9:126774018..126774055,+!p1@LHX2!1.42!25.04!LHX2;;chr12:26277956..26277980,-!p1@BHLHE41!1.41!87.01!BHLHE41;;chr15:31658288..31658338,+!p4@KLF13!1.41!24.54!KLF13;;chr10:48355030..48355090,+!p1@ZNF488!1.40!31.17!ZNF488;;chr5:92920256..92920282,+!p7@NR2F1!1.40!29.42!NR2F1;;chr3:181429741..181429767,+!p2@SOX2!1.40!24.16!SOX2;;chr17:7492684..7492778,-!p2@SOX15!1.39!49.20!SOX15;;chr8:53322347..53322378,-!p2@ST18!1.39!23.41!ST18;;chr12:106976774..106976788,+!p1@RFX4!1.36!22.16!RFX4;;chr14:29234581..29234601,+!p2@FOXG1!1.36!21.91!FOXG1;;chr11:8102846..8102892,+!p1@TUB!1.35!29.80!TUB;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.34!21.03!ZBED1;;chr8:145560111..145560165,-!p2@SCRT1!1.33!20.41!SCRT1;;chr3:126076242..126076257,-!p1@KLF15!1.32!24.41!KLF15;;chr6:143266185..143266238,-!p2@HIVEP2!1.30!25.91!HIVEP2;;chr14:33403881..33403924,+!p1@NPAS3!1.30!19.15!NPAS3;;chr7:31380292..31380351,-!p1@NEUROD6!1.29!18.53!NEUROD6;;chr11:125034640..125034655,+!p1@PKNOX2!1.29!18.28!PKNOX2;;chr17:70117153..70117174,+!p1@SOX9!1.28!182.40!SOX9;;chr1:61548069..61548102,+!p3@NFIA!1.27!42.19!NFIA;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.27!17.65!POU3F3;;chr6:126112039..126112062,+!p8@NCOA7!1.26!20.66!NCOA7;;chr8:145560371..145560449,-!p1@SCRT1!1.26!17.15!SCRT1;;chr9:77112225..77112238,+!p2@RORB!1.26!17.03!RORB;;chr1:214161272..214161322,+!p1@PROX1!1.25!23.66!PROX1;;chr11:47400078..47400106,-!p1@SPI1!1.25!16.65!SPI1;;chr6:15401104..15401166,+!p5@JARID2!1.24!16.27!JARID2;;chr5:88179017..88179046,-!p2@MEF2C!1.23!62.97!MEF2C;;chr3:24536253..24536328,-!p1@THRB!1.22!29.17!THRB;;chr6:19837592..19837621,+!p1@ID4!1.21!91.39!ID4;;chr14:58798013..58798071,+!p2@ARID4A!1.21!15.40!ARID4A;;chr19:46800289..46800327,+!p2@HIF3A!1.21!15.15!HIF3A;;chr19:7580549..7580596,+!p3@ZNF358!1.21!15.15!ZNF358;;chr2:200323414..200323455,-!p1@SATB2!1.20!31.30!SATB2;;chr3:141105705..141105770,+!p4@ZBTB38!1.20!18.15!ZBTB38;;chr2:162272889..162272915,+!p2@TBR1!1.20!14.77!TBR1;;chr11:113930401..113930422,+!p3@ZBTB16!1.20!14.77!ZBTB16;;chr16:85932760..85932775,+!p1@IRF8!1.19!14.40!IRF8;;chr19:57352109..57352153,-!p2@ZIM2!1.19!14.40!ZIM2;;chrX:85969626..85969664,+!p1@DACH2!1.18!14.27!DACH2;;chr14:33403648..33403710,+!p3@NPAS3!1.18!14.15!NPAS3;;chr2:60780607..60780624,-!p2@BCL11A!1.17!41.69!BCL11A;;chr12:54785074..54785122,-!p2@ZNF385A!1.16!20.91!ZNF385A;;chr19:38085768..38085821,+!p1@ZNF540!1.16!20.28!ZNF540;;chr1:244219775..244219893,+!p2@ZNF238!1.16!18.40!ZNF238;;chr2:162272716..162272753,+!p3@TBR1!1.16!13.52!TBR1;;chr6:28321971..28321995,-!p1@ZNF323!1.16!13.40!ZNF323;;chr17:38219209..38219230,+!p1@THRA!1.14!165.63!THRA;;chr9:3525867..3525902,-!p3@RFX3!1.14!44.32!RFX3;;chr11:113930291..113930339,+!p2@ZBTB16!1.14!21.16!ZBTB16;;chr12:103351444..103351461,+!p1@ASCL1!1.14!12.89!ASCL1;;chr7:63505799..63505904,+!p1@ZNF727!1.14!12.89!ZNF727;;chr19:38720294..38720348,-!p1@DPF1!1.13!15.65!DPF1;;chr4:57522166..57522260,-!p2@HOPX!1.13!14.27!HOPX;;chr16:67198633..67198671,+!p1@HSF4!1.13!12.52!HSF4;;chr15:31631789..31631811,+!p13@KLF13!1.13!12.39!KLF13;;chr1:151032860..151032918,+!p1@MLLT11!1.12!143.47!MLLT11;;chr3:141105235..141105307,+!p7@ZBTB38!1.12!12.14!ZBTB38;;chr9:3525910..3525955,-!p4@RFX3!1.11!35.43!RFX3;;chr20:42544782..42544828,+!p4@TOX2!1.11!12.02!TOX2;;chr12:24102576..24102623,-!p2@SOX5!1.11!11.77!SOX5;;chr2:180726291..180726311,-!p1@ZNF385B!1.11!11.77!ZNF385B;;chr11:125034605..125034636,+!p2@PKNOX2!1.10!11.64!PKNOX2;;chr2:2328299..2328363,-!p3@MYT1L!1.10!11.52!MYT1L;;chr7:73038839..73038862,-!p1@MLXIPL!1.10!11.52!MLXIPL;;chr16:79634624..79634642,-!p1@MAF!1.09!44.57!MAF;;chrX:118739835..118739862,-!p1@NKRF!1.09!12.39!NKRF;;chr21:39870339..39870443,-!p1@ERG!1.09!11.39!ERG;;chr3:187463179..187463201,-!p2@BCL6!1.08!45.44!BCL6;;chr14:33408072..33408114,+!p2@NPAS3!1.08!13.02!NPAS3;;chr3:24536332..24536358,-!p2@THRB!1.08!11.14!THRB;;chr9:126773880..126773895,+!p2@LHX2!1.08!11.02!LHX2;;chr2:166428839..166428859,+!p2@CSRNP3!1.08!10.89!CSRNP3;;chr8:30890810..30890880,-!p1@PURG!1.08!10.89!PURG;;chr17:38256822..38256851,-!p1@NR1D1!1.07!85.76!NR1D1;;chr18:52989031..52989079,-!p2@TCF4!1.07!25.29!TCF4;;chr3:18466660..18466676,-!p5@SATB1!1.07!12.52!SATB1;;chr5:71803177..71803255,-!p1@ZNF366!1.07!10.77!ZNF366;;chr1:40105299..40105326,-!p1@HEYL!1.07!10.64!HEYL;;chr15:61521417..61521460,-!p2@RORA!1.06!23.91!RORA;;chr7:64023410..64023428,-!p2@ZNF680!1.06!16.78!ZNF680;;chr16:51185318..51185348,-!p2@SALL1!1.06!10.52!SALL1;;chr9:126774058..126774081,+!p3@LHX2!1.06!10.39!LHX2;;chr4:57547751..57547764,-!p6@HOPX!1.05!10.27!HOPX;;chr3:114819124..114819200,-!p3@ZBTB20!1.04!23.54!ZBTB20;;chr5:178368186..178368238,+!p1@ZNF454!1.04!18.15!ZNF454;;chr12:24715376..24715432,-!p1@SOX5!1.04!12.77!SOX5;;chr5:88179518..88179569,-!p5@MEF2C!1.03!13.02!MEF2C;;chr16:67197654..67197716,+!p3@HSF4!1.03!9.76!HSF4;;chr2:95963120..95963136,+!p2@KCNIP3!1.03!9.76!KCNIP3;;chr2:2335109..2335134,-!p2@MYT1L!1.03!9.64!MYT1L;;chr3:114343039..114343085,-!p8@ZBTB20!1.03!9.64!ZBTB20;;chr8:93074803..93074845,-!p1@RUNX1T1!1.03!9.64!RUNX1T1;;chr1:8585945..8586056,-!p3@RERE!1.02!32.42!RERE;;chrX:118739782..118739829,-!p2@NKRF!1.02!9.51!NKRF;;chr16:67198683..67198698,+!p2@HSF4!1.02!9.51!HSF4;;chr2:2330039..2330072,-!p6@MYT1L!1.02!9.39!MYT1L;;chr11:31832807..31832823,-!p4@PAX6!1.02!9.39!PAX6;;chr3:18466787..18466839,-!p1@SATB1!1.01!41.81!SATB1;;chrX:70315688..70315709,+!p1@FOXO4!1.01!21.78!FOXO4;;chr13:46549911..46549956,-!p3@ZC3H13!1.01!13.40!ZC3H13;;chr12:26277929..26277955,-!p3@BHLHE41!1.01!13.15!BHLHE41;;chr20:51588873..51588953,+!p1@TSHZ2!1.01!12.27!TSHZ2;;chr11:31832658..31832681,-!p1@PAX6!1.01!9.26!PAX6;;chr19:57183114..57183145,-!p1@ZNF835!1.00!10.14!ZNF835;;chr10:31610110..31610159,+!p2@ZEB1!1.00!9.01!ZEB1;;chr12:106976656..106976672,+!p4@RFX4!1.00!9.01!RFX4;;chr19:30863271..30863338,+!p1@ZNF536!1.00!9.01!ZNF536;;chr9:14314946..14314983,-!p8@NFIB!1.00!9.01!NFIB;;chr13:100634031..100634045,+!p1@ZIC2!1.00!8.89!ZIC2;;chr3:126076264..126076305,-!p2@KLF15!0.99!12.39!KLF15;;chr20:62680984..62680999,-!p1@SOX18!0.99!11.77!SOX18;;chr12:125003087..125003141,-!p4@NCOR2!0.99!11.27!NCOR2;;chr19:13135566..13135577,+!p9@NFIX!0.99!8.76!NFIX;;chr19:53636125..53636178,-!p1@ZNF415!0.98!25.04!ZNF415;;chr16:86544113..86544145,+!p1@FOXF1!0.98!10.64!FOXF1;;chr8:10588010..10588030,-!p1@SOX7!0.97!8.26!SOX7;;chr2:214016314..214016343,-!p2@IKZF2!0.96!14.02!IKZF2;;chr8:60031682..60031710,-!p2@TOX!0.96!13.27!TOX;;chr2:162273241..162273253,+!p4@TBR1!0.96!8.14!TBR1;;chr6:126112074..126112144,+!p1@NCOA7!0.95!108.67!NCOA7;;chr20:3388541..3388575,-!p2@C20orf194!0.95!31.92!C20orf194;;chr16:79634595..79634620,-!p2@MAF!0.95!14.77!MAF;;chr2:100721281..100721307,-!p5@AFF3!0.95!8.01!AFF3;;chr13:100623375..100623425,-!p1@ZIC5!0.95!8.01!ZIC5;;chr5:138609489..138609542,+!p8@MATR3!0.95!7.89!MATR3;;chr19:4065848..4065909,-!p4@ZBTB7A!0.94!15.52!ZBTB7A;;chr21:34442584..34442587,+!p3@OLIG1!0.94!7.76!OLIG1;;chr2:180726331..180726344,-!p5@ZNF385B!0.94!7.76!ZNF385B;;chr3:21792682..21792720,-!p1@ZNF385D!0.94!7.64!ZNF385D;;chr15:80696666..80696700,+!p4@ARNT2!0.94!7.64!ARNT2;;chr7:64023441..64023462,-!p1@ZNF680!0.93!62.72!ZNF680;;chr10:38265517..38265591,-!p1@ZNF25!0.93!30.30!ZNF25;;chr2:113057415..113057477,+!p3@ZC3H6!0.93!10.02!ZC3H6;;chr10:119302268..119302282,+!p4@EMX2!0.93!7.51!EMX2;;chr1:167298300..167298319,+!p2@POU2F1!0.93!7.51!POU2F1;;chr14:73360799..73360817,-!p1@DPF3!0.92!26.29!DPF3;;chr16:67197776..67197831,+!p4@HSF4!0.92!7.39!HSF4;;chr18:53070913..53070933,-!p16@TCF4!0.92!7.39!TCF4;;chr13: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M;;chr6:28234822..28234836,+!p1@ZNF187!0.45!3.00!ZNF187;;chr19:4066782..4066802,-!p7@ZBTB7A!0.45!2.63!ZBTB7A;;chr8:116681275..116681290,-!p11@TRPS1!0.45!2.50!TRPS1;;chr5:124082279..124082319,-!p3@ZNF608!0.45!2.38!ZNF608;;chr21:40177845..40177863,+!p1@ETS2!0.44!147.60!ETS2;;chr8:73921085..73921125,+!p1@TERF1!0.44!70.11!TERF1;;chr20:39946279..39946356,-!p1@ZHX3!0.44!38.43!ZHX3;;chr2:238536207..238536290,+!p2@LRRFIP1!0.44!23.79!LRRFIP1;;chr7:44925044..44925156,-!p1@PURB!0.44!19.53!PURB;;chr19:38210622..38210681,-!p1@ZNF607!0.44!8.76!ZNF607;;chr8:144373550..144373617,+!p1@ZNF696!0.44!8.39!ZNF696;;chr12:72057747..72057854,+!p4@THAP2!0.44!6.13!THAP2;;chr19:37958318..37958365,-!p2@ZNF569!0.44!6.01!ZNF569;;chr16:3313791..3313834,+!p2@ZNF263!0.44!4.88!ZNF263;;chr19:15560730..15560772,-!p3@WIZ!0.44!4.51!WIZ;;chr6:170863353..170863368,+!p2@TBP!0.44!4.26!TBP;;chr16:3185024..3185045,+!p2@ZNF213!0.44!3.88!ZNF213;;chr2:185463247..185463263,+!p1@ZNF804A!0.44!3.76!ZNF804A;;chr19:58666441..58666478,-!p2@ZNF329!0.44!3.63!ZNF329;;chr3:37218023..37218069,-!p3@LRRFIP2!0.44!3.25!LRRFIP2;;chr8:71316222..71316259,-!p5@NCOA2!0.44!3.25!NCOA2;;chr19:57999082..57999095,+!p2@ZNF419!0.44!3.00!ZNF419;;chr20:306221..306232,+!p4@SOX12!0.44!2.63!SOX12;;chr16:89787436..89787450,+!p4@ZNF276!0.44!2.63!ZNF276;;chr8:116681247..116681261,-!p8@TRPS1!0.44!2.50!TRPS1;;chr15:77197781..77197801,-!p3@SCAPER!0.44!2.00!SCAPER;;chr12:51611660..51611692,-!p5@POU6F1!0.44!2.00!POU6F1;;chr12:26276647..26276688,-!p9@BHLHE41!0.44!1.75!BHLHE41;;chr12:26277994..26278001,-!p6@BHLHE41!0.44!1.75!BHLHE41;;chr6:126111875..126111886,+!p10@NCOA7!0.44!1.75!NCOA7;;chr7:50343634..50343717,+!p2@IKZF1!0.44!1.75!IKZF1;;chr7:88388775..88388795,+!p2@ZNF804B!0.44!1.75!ZNF804B;;chr8:116681878..116681893,-!p15@TRPS1!0.44!1.75!TRPS1;;chr8:22550071..22550096,-!p5@EGR3!0.44!1.75!EGR3;;chr8:93115274..93115323,-!p4@RUNX1T1!0.44!1.75!RUNX1T1;;chrX:47225841..47225861,+!p@chrX:47225841..47225861,+!0.44!1.75!ZNF157;;chr9:14314642..14314645,-!p16@NFIB!0.44!1.75!NFIB;;chrX:107019181..107019193,-!p10@TSC22D3!0.44!1.75!TSC22D3;;chr19:49140692..49140709,-!p5@DBP!0.44!1.75!DBP;;chr1:214161358..214161377,+!p3@PROX1!0.44!1.75!PROX1;;chr1:8484926..8484950,-!p39@RERE!0.44!1.75!RERE;;chr15:80696305..80696320,+!p10@ARNT2!0.44!1.75!ARNT2;;chr16:79634581..79634592,-!p4@MAF!0.44!1.75!MAF;;chr17:46131883..46131900,+!p16@NFE2L1!0.44!1.75!NFE2L1;;chr18:52988979..52988993,-!p18@TCF4!0.44!1.75!TCF4;;chr18:6414849..6414876,-!p2@L3MBTL4!0.44!1.75!L3MBTL4;;chr19:22605136..22605154,-!p1@ZNF98!0.44!1.75!ZNF98;;chr19:38085739..38085762,+!p3@ZNF540!0.44!1.75!ZNF540;;chr22:41763408..41763417,+!p5@TEF!0.44!1.75!TEF;;chr2:2328418..2328441,-!p13@MYT1L!0.44!1.75!MYT1L;;chr3:62359015..62359037,-!p2@FEZF2!0.44!1.75!FEZF2;;chr16:3930681..3930721,-!p1@CREBBP!0.43!42.69!CREBBP;;chr19:35168567..35168620,+!p1@ZNF302!0.43!27.54!ZNF302;;chr1:40915725..40915808,+!p1@ZNF643!0.43!6.51!ZNF643;;chr19:36980429..36980448,-!p1@ZNF566!0.43!6.26!ZNF566;;chr15:56535946..56535987,-!p1@RFX7!0.43!5.01!RFX7;;chr7:21467642..21467671,+!p2@SP4!0.43!4.88!SP4;;chr19:52408227..52408243,-!p2@ZNF649!0.43!4.76!ZNF649;;chr19:59084922..59084947,-!p3@MZF1!0.43!4.76!MZF1;;chr10:63809077..63809089,+!p5@ARID5B!0.43!4.63!ARID5B;;chr5:180287681..180287694,-!p2@ZFP62!0.43!4.51!ZFP62;;chr10:43932296..43932360,+!p1@ZNF487P!0.43!4.38!ZNF487P;;chr12:133706820..133706881,-!p1@ZNF891!0.43!4.38!ZNF891;;chr2:208030886..208030917,-!p4@KLF7!0.43!4.01!KLF7;;chr20:33413372..33413389,-!p2@NCOA6!0.43!3.88!NCOA6;;chr6:157099159..157099185,+!p6@ARID1B!0.43!3.51!ARID1B;;chr19:45261550..45261641,+!p6@BCL3!0.43!3.38!BCL3;;chr12:133707021..133707071,-!p2@ZNF891!0.43!3.38!ZNF891;;chr9:4299959..4299974,-!p4@GLIS3!0.43!3.13!GLIS3;;chr19:37341260..37341284,+!p2@ZNF345!0.43!2.63!ZNF345;;chr13:46543346..46543367,-!p9@ZC3H13!0.43!2.38!ZC3H13;;chr19:7580944..7581031,+!p1@ZNF358!0.42!71.36!ZNF358;;
+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000200;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000956;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001870;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002702;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528
 |ffid_belonging_in_development=UBERON:0002532,UBERON:0006601,UBERON:0010316
 |fonse_cell_line=

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FF:10150-102I6: Difference between revisions

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Revision as of 14:45, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0