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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@SAMD00005167
|DRA_sample_Accession=CAGE@SAMD00005167
|accession_numbers=CAGE;DRX008669;DRR009541;DRZ000966;DRZ002351
|accession_numbers=CAGE;DRX008669;DRR009541;DRZ000966;DRZ002351;DRZ012316;DRZ013701
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0002022,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0002022,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
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|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/insula%252c%2520adult%252c%2520pool1.CNhs10646.10039-101F3.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/insula%252c%2520adult%252c%2520pool1.CNhs10646.10039-101F3.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/insula%252c%2520adult%252c%2520pool1.CNhs10646.10039-101F3.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/insula%252c%2520adult%252c%2520pool1.CNhs10646.10039-101F3.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/insula%252c%2520adult%252c%2520pool1.CNhs10646.10039-101F3.hg38.nobarcode.ctss.bed.gz
|id=FF:10039-101F3
|id=FF:10039-101F3
|is_a=EFO:0002091;;FF:0010039
|is_a=EFO:0002091;;FF:0010039
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|library_id=CNhs10646
|library_id=CNhs10646
|library_id_phase_based=2:CNhs10646
|library_id_phase_based=2:CNhs10646
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10039
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10039
|name=insula, adult, pool1
|name=insula, adult, pool1
|namespace=FANTOM5
|namespace=FANTOM5
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|profile_rnaseq=
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang=en&db=human&roku_valid=1&rk[]=&order_key=score
|refex=http://refex.dbcls.jp/genelist.php?lang
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Line 92: Line 101:
|top_motifs=REST:4.55264096162;NHLH1,2:4.45367622929;EGR1..3:4.44347393155;AHR_ARNT_ARNT2:4.17517135414;PRRX1,2:4.05057661225;MYFfamily:3.83021369214;ZFP161:3.76554430806;MTE{core}:3.70157521518;ATF2:3.67301252527;MED-1{core}:3.65727115447;ZBTB6:3.55660337704;PAX5:3.54727656467;RREB1:3.47861349929;RFX1:3.35514406066;TFAP2B:3.35508220906;CUX2:3.23190364929;MTF1:3.20273484515;GTF2I:3.01275068352;HIC1:3.00469515651;MZF1:2.94160733443;SMAD1..7,9:2.79602159473;DBP:2.76582130862;HOXA9_MEIS1:2.72703696336;PRDM1:2.59588344649;BREu{core}:2.59115432333;OCT4_SOX2{dimer}:2.48412377263;TGIF1:2.4828412589;POU5F1:2.47567574539;SOX2:2.46135937351;NKX2-3_NKX2-5:2.42482870529;NANOG:2.41389372334;PATZ1:2.35609013217;SOX5:2.33610935443;MAZ:2.30567697419;JUN:2.27872357201;LMO2:2.27797384297;POU6F1:2.25119962198;RFX2..5_RFXANK_RFXAP:2.23979648603;SOX{8,9,10}:2.2339570541;FOXM1:2.23390352391;GFI1B:2.19589140236;NKX3-2:2.19563369789;MAFB:2.10284138789;GCM1,2:1.97127501997;TFDP1:1.89967126368;NRF1:1.89602905949;PAX6:1.85823895188;NFIX:1.80227971107;SOX17:1.77325237453;EBF1:1.7203339069;LEF1_TCF7_TCF7L1,2:1.69162502121;MYOD1:1.56630501323;ARID5B:1.56393145531;POU3F1..4:1.55143301756;HMGA1,2:1.51368232847;FOX{F1,F2,J1}:1.48189783154;GTF2A1,2:1.46525661493;RORA:1.42477667797;EP300:1.41539861079;RBPJ:1.41275178817;ZNF238:1.38618932004;ESRRA:1.37352791397;CDC5L:1.37293483261;HAND1,2:1.35543355057;NFIL3:1.33754612472;GATA4:1.33739818969;ADNP_IRX_SIX_ZHX:1.32461584163;HBP1_HMGB_SSRP1_UBTF:1.31340382399;SP1:1.30221849189;KLF4:1.29941649347;HOX{A4,D4}:1.2549611617;ZNF423:1.20309412726;XBP1:1.11837224814;SREBF1,2:1.09670318212;T:1.06365268102;MEF2{A,B,C,D}:1.05827707365;CREB1:0.98250526831;ZNF143:0.944252319915;TBX4,5:0.891639350186;TFAP2{A,C}:0.841633309653;YY1:0.840051797347;HMX1:0.838942002396;FOXN1:0.823604222471;ZEB1:0.787712735269;CRX:0.75615139821;TLX2:0.713650050244;SPZ1:0.687338356182;PBX1:0.658340513878;GFI1:0.627197078644;FOXQ1:0.607889999132;FOXP1:0.607511922718;TLX1..3_NFIC{dimer}:0.600031369107;ZIC1..3:0.583359310448;FOXP3:0.575740347158;ALX1:0.566997699386;XCPE1{core}:0.552654509135;bHLH_family:0.53853258253;STAT1,3:0.511164458235;ATF5_CREB3:0.478801359823;ATF4:0.414416494896;GZF1:0.413994587758;NKX6-1,2:0.372067473095;FOX{D1,D2}:0.363460131389;ZNF384:0.360406096812;BPTF:0.353183511846;PAX3,7:0.266338669077;MYBL2:0.234173563489;NANOG{mouse}:0.231444254727;POU1F1:0.176150153239;PAX2:0.167334347392;VSX1,2:0.144030673639;ONECUT1,2:0.118206205912;NR3C1:0.0862384340001;AR:0.0764920053552;LHX3,4:0.0254404106532;NFY{A,B,C}:0.0149099261113;IKZF1:0.0037735038623;IRF7:-0.00781408510147;FOX{I1,J2}:-0.00951492480427;TEF:-0.0351203645297;ZNF148:-0.0376829261967;PAX1,9:-0.049387151959;NFE2L2:-0.0511645473513;TFAP4:-0.0814729365852;SNAI1..3:-0.128613309795;FOXA2:-0.192166424481;PAX4:-0.207430533373;TOPORS:-0.276013537126;IKZF2:-0.292038152452;PDX1:-0.30559844401;TAL1_TCF{3,4,12}:-0.336464107794;NFATC1..3:-0.345565942753;GATA6:-0.390467927881;HOX{A6,A7,B6,B7}:-0.401356557001;NFE2:-0.422407390211;NR5A1,2:-0.451474268344;SPI1:-0.523626957764;NFE2L1:-0.529008012722;HSF1,2:-0.529964004652;FOXD3:-0.551920299372;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.602752721246;IRF1,2:-0.627440882787;DMAP1_NCOR{1,2}_SMARC:-0.630039647191;CEBPA,B_DDIT3:-0.632408365865;SPIB:-0.639850864058;GLI1..3:-0.651771169482;NR1H4:-0.665726817595;TFCP2:-0.669439476622;UFEwm:-0.680564800647;FOXL1:-0.697579700743;ETS1,2:-0.715026316179;ATF6:-0.718207895291;FOSL2:-0.739769622503;ESR1:-0.74041527486;STAT2,4,6:-0.765274887831;PAX8:-0.774052074187;FOXO1,3,4:-0.828313233967;HNF1A:-0.860444714299;TP53:-0.870951806603;BACH2:-0.913330090696;FOS_FOS{B,L1}_JUN{B,D}:-0.949910331352;TEAD1:-0.966207688054;ELK1,4_GABP{A,B1}:-0.976628746412;HIF1A:-1.01181744774;RUNX1..3:-1.10942947207;TBP:-1.12658283369;HNF4A_NR2F1,2:-1.1455758597;SRF:-1.16234201581;PPARG:-1.21476706433;NFKB1_REL_RELA:-1.23036062838;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.29191703811;HLF:-1.31457652256;E2F1..5:-1.33446161638;POU2F1..3:-1.37314176728;MYB:-1.41805232556;NKX3-1:-1.42397023074;RXR{A,B,G}:-1.46439303956;STAT5{A,B}:-1.6235061593;PITX1..3:-1.63212067295;ELF1,2,4:-1.6440112727;RXRA_VDR{dimer}:-1.6666062477;HES1:-1.69578600154;ZBTB16:-1.69757669796;NKX2-2,8:-1.70155883096;ALX4:-1.91442399913;EN1,2:-1.93447129406;EVI1:-2.21497844881;HOX{A5,B5}:-2.3352263681;NKX2-1,4:-2.3652813881;AIRE:-2.54107337946;CDX1,2,4:-2.75207925876;NR6A1:-3.4036621706
|top_motifs=REST:4.55264096162;NHLH1,2:4.45367622929;EGR1..3:4.44347393155;AHR_ARNT_ARNT2:4.17517135414;PRRX1,2:4.05057661225;MYFfamily:3.83021369214;ZFP161:3.76554430806;MTE{core}:3.70157521518;ATF2:3.67301252527;MED-1{core}:3.65727115447;ZBTB6:3.55660337704;PAX5:3.54727656467;RREB1:3.47861349929;RFX1:3.35514406066;TFAP2B:3.35508220906;CUX2:3.23190364929;MTF1:3.20273484515;GTF2I:3.01275068352;HIC1:3.00469515651;MZF1:2.94160733443;SMAD1..7,9:2.79602159473;DBP:2.76582130862;HOXA9_MEIS1:2.72703696336;PRDM1:2.59588344649;BREu{core}:2.59115432333;OCT4_SOX2{dimer}:2.48412377263;TGIF1:2.4828412589;POU5F1:2.47567574539;SOX2:2.46135937351;NKX2-3_NKX2-5:2.42482870529;NANOG:2.41389372334;PATZ1:2.35609013217;SOX5:2.33610935443;MAZ:2.30567697419;JUN:2.27872357201;LMO2:2.27797384297;POU6F1:2.25119962198;RFX2..5_RFXANK_RFXAP:2.23979648603;SOX{8,9,10}:2.2339570541;FOXM1:2.23390352391;GFI1B:2.19589140236;NKX3-2:2.19563369789;MAFB:2.10284138789;GCM1,2:1.97127501997;TFDP1:1.89967126368;NRF1:1.89602905949;PAX6:1.85823895188;NFIX:1.80227971107;SOX17:1.77325237453;EBF1:1.7203339069;LEF1_TCF7_TCF7L1,2:1.69162502121;MYOD1:1.56630501323;ARID5B:1.56393145531;POU3F1..4:1.55143301756;HMGA1,2:1.51368232847;FOX{F1,F2,J1}:1.48189783154;GTF2A1,2:1.46525661493;RORA:1.42477667797;EP300:1.41539861079;RBPJ:1.41275178817;ZNF238:1.38618932004;ESRRA:1.37352791397;CDC5L:1.37293483261;HAND1,2:1.35543355057;NFIL3:1.33754612472;GATA4:1.33739818969;ADNP_IRX_SIX_ZHX:1.32461584163;HBP1_HMGB_SSRP1_UBTF:1.31340382399;SP1:1.30221849189;KLF4:1.29941649347;HOX{A4,D4}:1.2549611617;ZNF423:1.20309412726;XBP1:1.11837224814;SREBF1,2:1.09670318212;T:1.06365268102;MEF2{A,B,C,D}:1.05827707365;CREB1:0.98250526831;ZNF143:0.944252319915;TBX4,5:0.891639350186;TFAP2{A,C}:0.841633309653;YY1:0.840051797347;HMX1:0.838942002396;FOXN1:0.823604222471;ZEB1:0.787712735269;CRX:0.75615139821;TLX2:0.713650050244;SPZ1:0.687338356182;PBX1:0.658340513878;GFI1:0.627197078644;FOXQ1:0.607889999132;FOXP1:0.607511922718;TLX1..3_NFIC{dimer}:0.600031369107;ZIC1..3:0.583359310448;FOXP3:0.575740347158;ALX1:0.566997699386;XCPE1{core}:0.552654509135;bHLH_family:0.53853258253;STAT1,3:0.511164458235;ATF5_CREB3:0.478801359823;ATF4:0.414416494896;GZF1:0.413994587758;NKX6-1,2:0.372067473095;FOX{D1,D2}:0.363460131389;ZNF384:0.360406096812;BPTF:0.353183511846;PAX3,7:0.266338669077;MYBL2:0.234173563489;NANOG{mouse}:0.231444254727;POU1F1:0.176150153239;PAX2:0.167334347392;VSX1,2:0.144030673639;ONECUT1,2:0.118206205912;NR3C1:0.0862384340001;AR:0.0764920053552;LHX3,4:0.0254404106532;NFY{A,B,C}:0.0149099261113;IKZF1:0.0037735038623;IRF7:-0.00781408510147;FOX{I1,J2}:-0.00951492480427;TEF:-0.0351203645297;ZNF148:-0.0376829261967;PAX1,9:-0.049387151959;NFE2L2:-0.0511645473513;TFAP4:-0.0814729365852;SNAI1..3:-0.128613309795;FOXA2:-0.192166424481;PAX4:-0.207430533373;TOPORS:-0.276013537126;IKZF2:-0.292038152452;PDX1:-0.30559844401;TAL1_TCF{3,4,12}:-0.336464107794;NFATC1..3:-0.345565942753;GATA6:-0.390467927881;HOX{A6,A7,B6,B7}:-0.401356557001;NFE2:-0.422407390211;NR5A1,2:-0.451474268344;SPI1:-0.523626957764;NFE2L1:-0.529008012722;HSF1,2:-0.529964004652;FOXD3:-0.551920299372;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.602752721246;IRF1,2:-0.627440882787;DMAP1_NCOR{1,2}_SMARC:-0.630039647191;CEBPA,B_DDIT3:-0.632408365865;SPIB:-0.639850864058;GLI1..3:-0.651771169482;NR1H4:-0.665726817595;TFCP2:-0.669439476622;UFEwm:-0.680564800647;FOXL1:-0.697579700743;ETS1,2:-0.715026316179;ATF6:-0.718207895291;FOSL2:-0.739769622503;ESR1:-0.74041527486;STAT2,4,6:-0.765274887831;PAX8:-0.774052074187;FOXO1,3,4:-0.828313233967;HNF1A:-0.860444714299;TP53:-0.870951806603;BACH2:-0.913330090696;FOS_FOS{B,L1}_JUN{B,D}:-0.949910331352;TEAD1:-0.966207688054;ELK1,4_GABP{A,B1}:-0.976628746412;HIF1A:-1.01181744774;RUNX1..3:-1.10942947207;TBP:-1.12658283369;HNF4A_NR2F1,2:-1.1455758597;SRF:-1.16234201581;PPARG:-1.21476706433;NFKB1_REL_RELA:-1.23036062838;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.29191703811;HLF:-1.31457652256;E2F1..5:-1.33446161638;POU2F1..3:-1.37314176728;MYB:-1.41805232556;NKX3-1:-1.42397023074;RXR{A,B,G}:-1.46439303956;STAT5{A,B}:-1.6235061593;PITX1..3:-1.63212067295;ELF1,2,4:-1.6440112727;RXRA_VDR{dimer}:-1.6666062477;HES1:-1.69578600154;ZBTB16:-1.69757669796;NKX2-2,8:-1.70155883096;ALX4:-1.91442399913;EN1,2:-1.93447129406;EVI1:-2.21497844881;HOX{A5,B5}:-2.3352263681;NKX2-1,4:-2.3652813881;AIRE:-2.54107337946;CDX1,2,4:-2.75207925876;NR6A1:-3.4036621706
|xref=
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10039-101F3;search_select_hide=table117:FF:10039-101F3
}}
}}

Latest revision as of 12:16, 3 June 2020

Name:insula, adult, pool1
Species:Human (Homo sapiens)
Library ID:CNhs10646
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueinsula
dev stage20-68 years old adult
sexmixed
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyClontech
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot number3040372
catalog numberCat:636568
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005167
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs10646 CAGE DRX008669 DRR009541
Accession ID Hg19

Library idBAMCTSS
CNhs10646 DRZ000966 DRZ002351
Accession ID Hg38

Library idBAMCTSS
CNhs10646 DRZ012316 DRZ013701
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.412
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.0833
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.347
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0.0498
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.154
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.543
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0256
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.154
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0256
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0.115
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0.154
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0.0727
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0289
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.133
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.256
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.0498
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0256
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.0587
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0.172
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.136
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0.0256
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.906
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0.0256
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.0751
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.469
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0.0256
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0.0498
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.673
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.135
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.0256
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth-0.101
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.432
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0256
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0.596
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.274
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.539
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.369
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.506
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.0256
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0.105
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.135
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0.0128
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.0256
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.768
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.0945
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0.267
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.35
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.0498
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.172
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0.0256
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10646

Jaspar motifP-value
MA0002.20.0104
MA0003.10.372
MA0004.10.479
MA0006.10.353
MA0007.10.157
MA0009.10.221
MA0014.10.651
MA0017.10.00288
MA0018.20.0643
MA0019.10.915
MA0024.10.916
MA0025.10.22
MA0027.10.408
MA0028.10.111
MA0029.10.0788
MA0030.10.236
MA0031.10.884
MA0035.20.124
MA0038.10.0375
MA0039.20.261
MA0040.10.54
MA0041.10.208
MA0042.10.643
MA0043.10.308
MA0046.10.0905
MA0047.20.0784
MA0048.10.112
MA0050.10.00805
MA0051.10.114
MA0052.10.0603
MA0055.10.00346
MA0057.10.925
MA0058.10.414
MA0059.10.077
MA0060.10.228
MA0061.10.00979
MA0062.20.0296
MA0065.24.07482e-4
MA0066.10.0239
MA0067.10.716
MA0068.10.326
MA0069.10.385
MA0070.10.0729
MA0071.10.0318
MA0072.10.507
MA0073.10.403
MA0074.10.172
MA0076.10.294
MA0077.10.294
MA0078.10.761
MA0079.20.386
MA0080.24.64257e-8
MA0081.10.0737
MA0083.10.146
MA0084.10.673
MA0087.10.407
MA0088.10.149
MA0090.10.237
MA0091.10.481
MA0092.10.374
MA0093.10.504
MA0099.22.38054e-10
MA0100.10.656
MA0101.10.00644
MA0102.20.245
MA0103.10.241
MA0104.20.46
MA0105.16.40256e-4
MA0106.10.0339
MA0107.10.01
MA0108.20.398
MA0111.10.431
MA0112.28.54365e-4
MA0113.10.236
MA0114.10.00294
MA0115.10.27
MA0116.10.0035
MA0117.10.955
MA0119.10.0458
MA0122.10.885
MA0124.10.696
MA0125.10.199
MA0131.10.953
MA0135.10.00505
MA0136.11.64938e-9
MA0137.20.303
MA0138.20.167
MA0139.10.385
MA0140.10.00705
MA0141.10.00871
MA0142.10.893
MA0143.10.992
MA0144.10.241
MA0145.10.227
MA0146.10.0114
MA0147.10.335
MA0148.10.0579
MA0149.10.0149
MA0150.10.00229
MA0152.10.893
MA0153.10.394
MA0154.10.037
MA0155.10.661
MA0156.14.3166e-5
MA0157.10.6
MA0159.10.00449
MA0160.10.0291
MA0162.10.104
MA0163.13.92487e-6
MA0164.10.747
MA0258.10.00949
MA0259.10.774



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs10646

Novel motifP-value
10.0313
100.0267
1000.268
1010.77
1020.746
1030.176
1040.15
1050.379
1060.0516
1070.119
1080.849
1090.00851
110.0142
1100.0453
1110.0648
1120.282
1130.691
1140.0734
1150.835
1160.175
1170.0095
1180.093
1190.0848
120.83
1200.135
1210.74
1220.535
1230.628
1240.0537
1250.15
1260.0307
1270.457
1280.16
1290.496
130.00151
1300.524
1310.0895
1320.734
1330.00281
1340.259
1350.231
1360.00884
1370.78
1380.895
1390.061
140.89
1400.171
1410.227
1420.892
1430.0126
1440.837
1450.087
1460.63
1470.833
1480.107
1490.3
150.0725
1500.168
1510.613
1520.126
1530.8
1540.591
1550.455
1560.387
1570.447
1580.848
1590.0801
160.0719
1600.192
1610.17
1620.947
1630.861
1640.0182
1650.0248
1660.884
1670.289
1680.582
1690.00726
170.155
180.2
190.191
20.972
200.0983
210.088
220.237
230.416
240.108
250.5
261.59508e-4
270.921
280.658
290.0111
30.0249
300.627
310.85
320.0298
330.0747
340.794
350.462
360.098
370.0353
380.307
390.24
40.978
400.0492
410.429
420.169
430.106
440.066
450.801
460.0581
470.0535
480.0479
490.125
50.43
500.355
510.513
520.625
530.905
540.461
550.396
560.47
570.237
580.303
590.133
60.547
600.0718
610.0591
620.175
630.148
640.2
650.277
660.301
670.327
680.303
690.368
70.0586
700.0151
710.0109
720.471
730.0432
740.607
750.0294
760.366
770.208
780.00309
790.176
80.0538
800.922
810.55
820.477
830.166
840.743
850.198
860.208
870.00614
880.851
890.54
90.54
900.0277
910.422
920.443
930.61
940.0685
950.0261
960.955
970.798
980.213
990.711



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs10646


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0002022 (insula)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010039 (human insula - adult sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

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