FF:10043-101F7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002370 | |DRA_sample_Accession=CAGE@SAMD00005030 | ||
|DRA_sample_Accession_RNASeq=RNA-Seq@SAMD00005030 | |||
|accession_numbers=CAGE;DRX008746;DRR009618;DRZ001043;DRZ002428;DRZ012393;DRZ013778 | |||
|accession_numbers_RNASeq=RNA-Seq;DRX057115;DRR062874;DRZ007950 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002370,UBERON:0000479,UBERON:0004119,UBERON:0000062,UBERON:0000475,UBERON:0004120,UBERON:0000077,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002368,UBERON:0004177,UBERON:0005057,UBERON:0002530,UBERON:0005058,UBERON:0010317,UBERON:0000153,UBERON:0002390,UBERON:0000949,UBERON:0002193,UBERON:0002405,UBERON:0009113 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010043 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!2.77!594.12!TCF7;;chr4:109090075..109090095,-!p2@LEF1!2.33!214.53!LEF1;;chr4:109087445..109087463,-!p1@LEF1!2.26!180.51!LEF1;;chr3:18486354..18486377,-!p2@SATB1!2.17!180.89!SATB1;;chr1:151798546..151798590,-!p2@RORC!2.03!105.09!RORC;;chr3:18480217..18480239,-!p3@SATB1!2.00!98.45!SATB1;;chr8:60031619..60031676,-!p1@TOX!1.97!194.42!TOX;;chr5:133450365..133450444,+!p1@TCF7!1.86!306.77!TCF7;;chr17:37934365..37934387,-!p2@IKZF3!1.85!69.96!IKZF3;;chr3:63953435..63953499,+!p1@ATXN7!1.83!66.92!ATXN7;;chr5:133451347..133451358,+!p3@TCF7!1.82!65.12!TCF7;;chr20:21686317..21686350,+!p1@PAX1!1.79!60.83!PAX1;;chr7:50343634..50343717,+!p2@IKZF1!1.76!56.86!IKZF1;;chr16:85932760..85932775,+!p1@IRF8!1.72!51.65!IRF8;;chr3:18487057..18487105,-!p4@SATB1!1.68!46.87!SATB1;;chr2:214015111..214015179,-!p1@IKZF2!1.65!76.60!IKZF2;;chr10:8096631..8096660,+!p1@GATA3!1.64!51.65!GATA3;;chr2:100759010..100759035,-!p1@AFF3!1.63!41.90!AFF3;;chr6:135502501..135502546,+!p1@MYB!1.62!48.60!MYB;;chrY:21906594..21906622,-!p1@KDM5D!1.61!39.48!KDM5D;;chr10:8096772..8096787,+!p2@GATA3!1.60!45.19!GATA3;;chr14:37131058..37131139,+!p1@PAX9!1.60!38.67!PAX9;;chr21:36421535..36421610,-!p2@RUNX1!1.59!129.74!RUNX1;;chr9:117150254..117150271,-!p1@AKNA!1.58!98.70!AKNA;;chr6:135502408..135502459,+!p2@MYB!1.58!42.65!MYB;;chr16:68119324..68119364,+!p1@NFATC3!1.57!155.75!NFATC3;;chr9:77112244..77112262,+!p1@RORB!1.55!38.30!RORB;;chr4:109090054..109090073,-!p7@LEF1!1.54!33.83!LEF1;;chr2:214013461..214013517,-!p6@IKZF2!1.52!32.34!IKZF2;;chr11:47400078..47400106,-!p1@SPI1!1.51!31.35!SPI1;;chr7:50344251..50344288,+!p3@IKZF1!1.51!31.29!IKZF1;;chr6:91006518..91006570,-!p1@BACH2!1.50!69.28!BACH2;;chr4:109087906..109087928,-!p12@LEF1!1.50!30.85!LEF1;;chr2:100759037..100759058,-!p2@AFF3!1.48!29.30!AFF3;;chr2:214014959..214015006,-!p4@IKZF2!1.47!28.74!IKZF2;;chr7:50348268..50348366,+!p4@IKZF1!1.47!28.43!IKZF1;;chr3:189507432..189507459,+!p1@TP63!1.46!28.00!TP63;;chr1:92949331..92949377,-!p2@GFI1!1.46!28.00!GFI1;;chr4:109089901..109089930,-!p3@LEF1!1.45!27.31!LEF1;;chr13:41593425..41593480,-!p1@ELF1!1.44!161.33!ELF1;;chr3:71355163..71355209,-!p5@FOXP1!1.44!36.44!FOXP1;;chr3:141868293..141868355,-!p2@TFDP2!1.43!218.94!TFDP2;;chr15:57210961..57211012,+!p3@TCF12!1.43!81.38!TCF12;;chr6:391743..391759,+!p1@IRF4!1.43!26.13!IRF4;;chr1:23857698..23857733,-!p1@E2F2!1.42!46.06!E2F2;;chr3:111314186..111314204,-!p1@ZBED2!1.41!24.83!ZBED2;;chr2:68592406..68592424,+!p1@PLEK!1.40!24.33!PLEK;;chr3:18480173..18480189,-!p6@SATB1!1.40!24.15!SATB1;;chr2:60778035..60778060,-!p4@BCL11A!1.39!27.87!BCL11A;;chr11:128392273..128392308,-!p2@ETS1!1.35!88.33!ETS1;;chr7:50344289..50344323,+!p1@IKZF1!1.35!21.54!IKZF1;;chr19:46801639..46801699,+!p1@HIF3A!1.34!20.86!HIF3A;;chr2:42795745..42795824,+!p1@MTA3!1.33!182.00!MTA3;;chr4:109090106..109090124,-!p10@LEF1!1.32!20.05!LEF1;;chr7:50343895..50343936,+!p5@IKZF1!1.32!19.86!IKZF1;;chr4:109086321..109086357,-!p16@LEF1!1.31!19.37!LEF1;;chr12:103351444..103351461,+!p1@ASCL1!1.26!17.01!ASCL1;;chr6:91006575..91006602,-!p2@BACH2!1.25!24.64!BACH2;;chr11:128392309..128392350,-!p3@ETS1!1.24!38.36!ETS1;;chr1:209979467..209979494,-!p1@IRF6!1.24!18.50!IRF6;;chr19:50922187..50922204,+!p1@SPIB!1.24!16.33!SPIB;;chr21:47063625..47063658,+!p1@PCBP3!1.23!69.09!PCBP3;;chr13:72441315..72441454,-!p1@DACH1!1.23!31.72!DACH1;;chr2:60781201..60781258,-!p3@BCL11A!1.23!15.89!BCL11A;;chr4:109086403..109086421,-!p19@LEF1!1.23!15.83!LEF1;;chr3:114819124..114819200,-!p3@ZBTB20!1.20!34.02!ZBTB20;;chr2:100758991..100759009,-!p3@AFF3!1.20!14.96!AFF3;;chr4:109089996..109090012,-!p5@LEF1!1.19!14.65!LEF1;;chr9:1050331..1050363,+!p1@DMRT2!1.19!14.65!DMRT2;;chr20:21686290..21686311,+!p2@PAX1!1.19!14.34!PAX1;;chr3:141747459..141747475,-!p1@TFDP2!1.18!115.71!TFDP2;;chr3:71179699..71179744,-!p2@FOXP1!1.18!104.78!FOXP1;;chr2:70142232..70142251,+!p1@MXD1!1.18!79.39!MXD1;;chr4:109088940..109089037,-!p4@LEF1!1.18!14.15!LEF1;;chr17:80797886..80797906,-!p1@ZNF750!1.17!13.78!ZNF750;;chr20:42543441..42543497,+!p1@TOX2!1.15!59.22!TOX2;;chr9:3525867..3525902,-!p3@RFX3!1.15!45.44!RFX3;;chr4:109087885..109087899,-!p23@LEF1!1.15!12.97!LEF1;;chr17:38020392..38020477,-!p1@IKZF3!1.14!12.91!IKZF3;;chr8:60031563..60031574,-!p7@TOX!1.13!12.54!TOX;;chr2:214015343..214015366,-!p3@IKZF2!1.13!12.41!IKZF2;;chr7:44143925..44143970,+!p1@AEBP1!1.12!269.96!AEBP1;;chr16:79634624..79634642,-!p1@MAF!1.12!47.43!MAF;;chr21:39870339..39870443,-!p1@ERG!1.12!12.17!ERG;;chr20:62680984..62680999,-!p1@SOX18!1.11!15.95!SOX18;;chr10:8095593..8095625,+!p3@GATA3!1.10!13.72!GATA3;;chr15:57025732..57025743,-!p6@ZNF280D!1.10!11.67!ZNF280D;;chr11:111249993..111250006,-!p1@POU2AF1!1.10!11.48!POU2AF1;;chr6:135502472..135502489,+!p3@MYB!1.08!10.93!MYB;;chr17:42295777..42295816,-!p7@UBTF!1.07!13.10!UBTF;;chr19:19729477..19729542,-!p1@PBX4!1.06!22.41!PBX4;;chr5:71803177..71803255,-!p1@ZNF366!1.06!10.49!ZNF366;;chr1:92951607..92951661,-!p1@GFI1!1.06!10.43!GFI1;;chr3:141747441..141747452,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| |expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!2.77!594.12!TCF7;;chr4:109090075..109090095,-!p2@LEF1!2.33!214.53!LEF1;;chr4:109087445..109087463,-!p1@LEF1!2.26!180.51!LEF1;;chr3:18486354..18486377,-!p2@SATB1!2.17!180.89!SATB1;;chr1:151798546..151798590,-!p2@RORC!2.03!105.09!RORC;;chr3:18480217..18480239,-!p3@SATB1!2.00!98.45!SATB1;;chr8:60031619..60031676,-!p1@TOX!1.97!194.42!TOX;;chr5:133450365..133450444,+!p1@TCF7!1.86!306.77!TCF7;;chr17:37934365..37934387,-!p2@IKZF3!1.85!69.96!IKZF3;;chr3:63953435..63953499,+!p1@ATXN7!1.83!66.92!ATXN7;;chr5:133451347..133451358,+!p3@TCF7!1.82!65.12!TCF7;;chr20:21686317..21686350,+!p1@PAX1!1.79!60.83!PAX1;;chr7:50343634..50343717,+!p2@IKZF1!1.76!56.86!IKZF1;;chr16:85932760..85932775,+!p1@IRF8!1.72!51.65!IRF8;;chr3:18487057..18487105,-!p4@SATB1!1.68!46.87!SATB1;;chr2:214015111..214015179,-!p1@IKZF2!1.65!76.60!IKZF2;;chr10:8096631..8096660,+!p1@GATA3!1.64!51.65!GATA3;;chr2:100759010..100759035,-!p1@AFF3!1.63!41.90!AFF3;;chr6:135502501..135502546,+!p1@MYB!1.62!48.60!MYB;;chrY:21906594..21906622,-!p1@KDM5D!1.61!39.48!KDM5D;;chr10:8096772..8096787,+!p2@GATA3!1.60!45.19!GATA3;;chr14:37131058..37131139,+!p1@PAX9!1.60!38.67!PAX9;;chr21:36421535..36421610,-!p2@RUNX1!1.59!129.74!RUNX1;;chr9:117150254..117150271,-!p1@AKNA!1.58!98.70!AKNA;;chr6:135502408..135502459,+!p2@MYB!1.58!42.65!MYB;;chr16:68119324..68119364,+!p1@NFATC3!1.57!155.75!NFATC3;;chr9:77112244..77112262,+!p1@RORB!1.55!38.30!RORB;;chr4:109090054..109090073,-!p7@LEF1!1.54!33.83!LEF1;;chr2:214013461..214013517,-!p6@IKZF2!1.52!32.34!IKZF2;;chr11:47400078..47400106,-!p1@SPI1!1.51!31.35!SPI1;;chr7:50344251..50344288,+!p3@IKZF1!1.51!31.29!IKZF1;;chr6:91006518..91006570,-!p1@BACH2!1.50!69.28!BACH2;;chr4:109087906..109087928,-!p12@LEF1!1.50!30.85!LEF1;;chr2:100759037..100759058,-!p2@AFF3!1.48!29.30!AFF3;;chr2:214014959..214015006,-!p4@IKZF2!1.47!28.74!IKZF2;;chr7:50348268..50348366,+!p4@IKZF1!1.47!28.43!IKZF1;;chr3:189507432..189507459,+!p1@TP63!1.46!28.00!TP63;;chr1:92949331..92949377,-!p2@GFI1!1.46!28.00!GFI1;;chr4:109089901..109089930,-!p3@LEF1!1.45!27.31!LEF1;;chr13:41593425..41593480,-!p1@ELF1!1.44!161.33!ELF1;;chr3:71355163..71355209,-!p5@FOXP1!1.44!36.44!FOXP1;;chr3:141868293..141868355,-!p2@TFDP2!1.43!218.94!TFDP2;;chr15:57210961..57211012,+!p3@TCF12!1.43!81.38!TCF12;;chr6:391743..391759,+!p1@IRF4!1.43!26.13!IRF4;;chr1:23857698..23857733,-!p1@E2F2!1.42!46.06!E2F2;;chr3:111314186..111314204,-!p1@ZBED2!1.41!24.83!ZBED2;;chr2:68592406..68592424,+!p1@PLEK!1.40!24.33!PLEK;;chr3:18480173..18480189,-!p6@SATB1!1.40!24.15!SATB1;;chr2:60778035..60778060,-!p4@BCL11A!1.39!27.87!BCL11A;;chr11:128392273..128392308,-!p2@ETS1!1.35!88.33!ETS1;;chr7:50344289..50344323,+!p1@IKZF1!1.35!21.54!IKZF1;;chr19:46801639..46801699,+!p1@HIF3A!1.34!20.86!HIF3A;;chr2:42795745..42795824,+!p1@MTA3!1.33!182.00!MTA3;;chr4:109090106..109090124,-!p10@LEF1!1.32!20.05!LEF1;;chr7:50343895..50343936,+!p5@IKZF1!1.32!19.86!IKZF1;;chr4:109086321..109086357,-!p16@LEF1!1.31!19.37!LEF1;;chr12:103351444..103351461,+!p1@ASCL1!1.26!17.01!ASCL1;;chr6:91006575..91006602,-!p2@BACH2!1.25!24.64!BACH2;;chr11:128392309..128392350,-!p3@ETS1!1.24!38.36!ETS1;;chr1:209979467..209979494,-!p1@IRF6!1.24!18.50!IRF6;;chr19:50922187..50922204,+!p1@SPIB!1.24!16.33!SPIB;;chr21:47063625..47063658,+!p1@PCBP3!1.23!69.09!PCBP3;;chr13:72441315..72441454,-!p1@DACH1!1.23!31.72!DACH1;;chr2:60781201..60781258,-!p3@BCL11A!1.23!15.89!BCL11A;;chr4:109086403..109086421,-!p19@LEF1!1.23!15.83!LEF1;;chr3:114819124..114819200,-!p3@ZBTB20!1.20!34.02!ZBTB20;;chr2:100758991..100759009,-!p3@AFF3!1.20!14.96!AFF3;;chr4:109089996..109090012,-!p5@LEF1!1.19!14.65!LEF1;;chr9:1050331..1050363,+!p1@DMRT2!1.19!14.65!DMRT2;;chr20:21686290..21686311,+!p2@PAX1!1.19!14.34!PAX1;;chr3:141747459..141747475,-!p1@TFDP2!1.18!115.71!TFDP2;;chr3:71179699..71179744,-!p2@FOXP1!1.18!104.78!FOXP1;;chr2:70142232..70142251,+!p1@MXD1!1.18!79.39!MXD1;;chr4:109088940..109089037,-!p4@LEF1!1.18!14.15!LEF1;;chr17:80797886..80797906,-!p1@ZNF750!1.17!13.78!ZNF750;;chr20:42543441..42543497,+!p1@TOX2!1.15!59.22!TOX2;;chr9:3525867..3525902,-!p3@RFX3!1.15!45.44!RFX3;;chr4:109087885..109087899,-!p23@LEF1!1.15!12.97!LEF1;;chr17:38020392..38020477,-!p1@IKZF3!1.14!12.91!IKZF3;;chr8:60031563..60031574,-!p7@TOX!1.13!12.54!TOX;;chr2:214015343..214015366,-!p3@IKZF2!1.13!12.41!IKZF2;;chr7:44143925..44143970,+!p1@AEBP1!1.12!269.96!AEBP1;;chr16:79634624..79634642,-!p1@MAF!1.12!47.43!MAF;;chr21:39870339..39870443,-!p1@ERG!1.12!12.17!ERG;;chr20:62680984..62680999,-!p1@SOX18!1.11!15.95!SOX18;;chr10:8095593..8095625,+!p3@GATA3!1.10!13.72!GATA3;;chr15:57025732..57025743,-!p6@ZNF280D!1.10!11.67!ZNF280D;;chr11:111249993..111250006,-!p1@POU2AF1!1.10!11.48!POU2AF1;;chr6:135502472..135502489,+!p3@MYB!1.08!10.93!MYB;;chr17:42295777..42295816,-!p7@UBTF!1.07!13.10!UBTF;;chr19:19729477..19729542,-!p1@PBX4!1.06!22.41!PBX4;;chr5:71803177..71803255,-!p1@ZNF366!1.06!10.49!ZNF366;;chr1:92951607..92951661,-!p1@GFI1!1.06!10.43!GFI1;;chr3:141747441..141747452,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F195;;chr2:231191875..231191918,+!p1@SP140L!0.42!22.97!SP140L;;chr10:21823128..21823216,+!p1@MLLT10!0.42!20.80!MLLT10;;chr1:202777561..202777582,-!p3@KDM5B!0.42!19.74!KDM5B;;chr19:20278012..20278034,+!p1@ZNF486!0.42!19.49!ZNF486;;chr1:150849174..150849200,-!p2@ARNT!0.42!15.15!ARNT;;chr20:49547691..49547724,-!p2@ADNP!0.42!14.46!ADNP;;chr6:151712673..151712709,-!p1@ZBTB2!0.42!13.22!ZBTB2;;chr17:4981745..4981810,+!p1@ZFP3!0.42!11.24!ZFP3;;chr6:28092375..28092412,+!p1@ZSCAN16!0.42!9.44!ZSCAN16;;chr8:81398444..81398472,+!p1@ZBTB10!0.42!9.00!ZBTB10;;chr19:12405645..12405685,-!p1@ZNF44!0.42!7.88!ZNF44;;chr3:187463220..187463232,-!p3@BCL6!0.42!6.52!BCL6;;chr10:76586311..76586341,+!p2@KAT6B!0.42!5.96!KAT6B;;chr8:106330656..106330684,+!p1@ZFPM2!0.42!5.52!ZFPM2;;chr9:2015306..2015323,+!p3@SMARCA2!0.42!5.52!SMARCA2;;chr1:61548069..61548102,+!p3@NFIA!0.42!5.09!NFIA;;chr1:91487836..91487854,-!p3@ZNF644!0.42!4.72!ZNF644;;chr1:151319654..151319698,-!p2@RFX5!0.42!4.47!RFX5;;chr17:7492684..7492778,-!p2@SOX15!0.42!4.35!SOX15;;chr7:104654690..104654704,+!p2@MLL5!0.42!4.03!MLL5;;chr17:7388010..7388017,-!p5@ZBTB4!0.42!3.29!ZBTB4;;chr19:13213662..13213686,-!p1@LYL1!0.42!2.79!LYL1;;chr4:146859887..146859921,-!p3@ZNF827!0.42!2.67!ZNF827;;chr7:152133109..152133116,-!p2@MLL3!0.42!2.36!MLL3;;chr16:30583204..30583233,-!p5@ZNF688!0.42!2.23!ZNF688;;chr10:97890311..97890324,+!p6@ZNF518A!0.42!2.17!ZNF518A;;chr9:125667739..125667770,-!p4@RC3H2!0.42!1.99!RC3H2;;chr11:6953654..6953661,+!p5@ZNF215!0.42!1.61!ZNF215;;chr6:108910863..108910912,+!p8@FOXO3!0.42!1.61!FOXO3;;chr6:90929463..90929474,-!p9@BACH2!0.42!1.61!BACH2;;chr18:53089521..53089533,-!p22@TCF4!0.42!1.61!TCF4;;chr19:12998003..12998021,-!p1@KLF1!0.42!1.61!KLF1;;chr2:242556900..242556916,-!p6@THAP4!0.42!1.61!THAP4;;chr3:189507460..189507471,+!p3@TP63!0.42!1.61!TP63;;chr3:71355138..71355149,-!p41@FOXP1!0.42!1.61!FOXP1;;chr2:176032843..176032941,-!p1@ATF2!0.41!95.22!ATF2;;chr16:31085714..31085783,+!p1@ZNF646!0.41!37.99!ZNF646;;chr2:27805880..27805967,+!p1@ZNF512!0.41!32.34!ZNF512;;chr2:145277640..145277771,-!p1@ZEB2!0.41!31.16!ZEB2;;chr22:42666624..42666673,-!p@chr22:42666624..42666673,-!0.41!25.08!TCF20;;chr12:2986275..2986363,-!p1@FOXM1!0.41!22.78!FOXM1;;chr16:68573182..68573228,+!p1@ZFP90!0.41!22.16!ZFP90;;chr11:118992269..118992334,+!p1@HINFP!0.41!19.49!HINFP;;chr7:64023441..64023462,-!p1@ZNF680!0.41!17.94!ZNF680;;chr18:32870148..32870223,-!p1@ZSCAN30!0.41!15.95!ZSCAN30;;chr6:108880956..108881011,+!p1@FOXO3!0.41!14.84!FOXO3;;chr19:52643169..52643199,-!p1@ZNF616!0.41!13.10!ZNF616;;chr10:31320777..31320834,-!p1@ZNF438!0.41!11.24!ZNF438;;chr7:5085480..5085510,+!p1@RBAK!0.41!10.06!RBAK;;chr19:53030906..53030952,+!p1@ZNF808!0.41!8.07!ZNF808;;chr19:53636125..53636178,-!p1@ZNF415!0.41!6.02!ZNF415;;chr19:47615426..47615439,-!p5@ZC3H4!0.41!4.78!ZC3H4;;chr9:99180617..99180658,-!p1@ZNF367!0.41!4.41!ZNF367;;chr12:133707021..133707071,-!p2@ZNF891!0.41!3.17!ZNF891;;chr18:47814010..47814021,-!p3@CXXC1!0.41!3.17!CXXC1;;chr18:42260059..42260132,+!p1@SETBP1!0.41!3.10!SETBP1;;chr12:19592563..19592585,+!p5@AEBP2!0.41!2.92!AEBP2;;chr14:103059006..103059017,+!p2@RCOR1!0.41!2.92!RCOR1;;chr14:24584138..24584192,-!p2@NRL!0.41!2.92!NRL;;chr12:56583371..56583394,-!p2@SMARCC2!0.41!2.86!SMARCC2;;chr4:103422076..103422117,+!p5@NFKB1!0.41!2.61!NFKB1;;chr10:31320840..31320859,-!p4@ZNF438!0.41!2.55!ZNF438;;chr3:21792585..21792625,-!p2@ZNF385D!0.41!1.86!ZNF385D;;chr3:27763807..27763822,-!p1@EOMES!0.41!1.55!EOMES;;chr4:109089515..109089523,-!p31@LEF1!0.41!1.55!LEF1;;chr16:79634464..79634493,-!p5@MAF!0.41!1.55!MAF;;chr6:91006309..91006314,-!p10@BACH2!0.41!1.55!BACH2;;chr9:117138946..117138968,-!p4@AKNA!0.41!1.55!AKNA;;chr11:10879593..10879620,-!p1@ZBED5!0.40!69.96!ZBED5;;chr3:183415558..183415649,+!p1@YEATS2!0.40!60.58!YEATS2;;chr10:111985713..111985774,+!p2@MXI1!0.40!21.17!MXI1;;chr7:1570322..1570360,+!p1@MAFK!0.40!18.56!MAFK;;chr9:88969339..88969422,-!p2@ZCCHC6!0.40!17.19!ZCCHC6;;chr19:57831829..57831890,+!p1@ZNF543!0.40!13.47!ZNF543;;chr5:178286925..178287007,+!p1@ZNF354B!0.40!12.48!ZNF354B;;chr9:14314131..14314147,-!p2@NFIB!0.40!12.23!NFIB;;chr19:35759424..35759454,+!p2@USF2!0.40!12.17!USF2;;chr7:149194843..149194922,-!p2@ZNF746!0.40!11.17!ZNF746;;chr19:19496624..19496660,+!p3@GATAD2A!0.40!9.75!GATAD2A;;chr18:22932080..22932170,-!p1@ZNF521!0.40!8.94!ZNF521;;chrX:134477924..134477988,-!p1@ZNF75D!0.40!7.88!ZNF75D;;chr18:72922743..72922761,+!p3@TSHZ1!0.40!6.77!TSHZ1;;chr4:83821835..83821896,+!p1@THAP9!0.40!6.64!THAP9;;chr14:21994449..21994524,-!p2@SALL2!0.40!6.15!SALL2;;chr10:97890024..97890064,+!p2@ZNF518A!0.40!5.46!ZNF518A;;chr2:74229812..74229867,+!p1@TET3!0.40!4.97!TET3;;chr1:42501569..42501614,-!p1@HIVEP3!0.40!3.97!HIVEP3;;chr16:30596963..30596999,-!p3@ZNF785!0.40!3.79!ZNF785;;chr8:123793959..123793977,+!p4@ZHX2!0.40!3.72!ZHX2;;chr7:64254834..64254854,+!p2@ZNF138!0.40!3.35!ZNF138;;chr1:91487013..91487070,-!p6@ZNF644!0.40!2.42!ZNF644;;chr10:21822984..21823023,+!p5@MLLT10!0.40!2.17!MLLT10;;chr3:44626359..44626387,+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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000949;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002368;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002370;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002465;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004177;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0004807;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0005911;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0008814;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0009722 | |||
|ffid_belonging_in_development=UBERON:0002532,UBERON:0006595,UBERON:0006603,UBERON:0010316 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/thymus%252c%2520fetal%252c%2520pool1.CNhs10650.10043-101F7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/thymus%252c%2520fetal%252c%2520pool1.CNhs10650.10043-101F7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/thymus%252c%2520fetal%252c%2520pool1.CNhs10650.10043-101F7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/thymus%252c%2520fetal%252c%2520pool1.CNhs10650.10043-101F7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/thymus%252c%2520fetal%252c%2520pool1.CNhs10650.10043-101F7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10043-101F7 | |id=FF:10043-101F7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010043 | ||
|is_obsolete= | |||
|library_id=CNhs10650 | |||
|library_id_phase_based=2:CNhs10650 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10043 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10043 | |||
|name=thymus, fetal, pool1 | |name=thymus, fetal, pool1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 63: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10650,LSID658,release008,COMPLETED | |profile_hcage=CNhs10650,LSID658,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:636586 | |rna_catalog_number=Cat:636586 | ||
| Line 56: | Line 80: | ||
|rna_tube_id=101F7 | |rna_tube_id=101F7 | ||
|rna_weight_ug=50 | |rna_weight_ug=50 | ||
|rnaseq_library_id=RDhi10057 | |||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 77: | Line 103: | ||
|sample_tissue=thymus | |sample_tissue=thymus | ||
|top_motifs=TLX2:3.72434949324;NFY{A,B,C}:2.48460326807;TBP:2.33138856115;FOXO1,3,4:2.12581723215;ELF1,2,4:2.09301107077;LMO2:1.92040451403;RORA:1.76651908811;ETS1,2:1.7655837006;SP1:1.72438490764;TGIF1:1.70450495212;STAT1,3:1.56540712616;RUNX1..3:1.52070379162;HBP1_HMGB_SSRP1_UBTF:1.50467093538;SPZ1:1.46761157441;GATA6:1.45013710444;PATZ1:1.44984397345;SMAD1..7,9:1.41334943326;EP300:1.39791393415;BREu{core}:1.38496431209;BPTF:1.35758200096;DMAP1_NCOR{1,2}_SMARC:1.31781949541;MAZ:1.2431115645;FOXN1:1.19145459492;SPI1:1.18834342643;NRF1:1.1594112192;T:1.15424038537;FOX{D1,D2}:1.15193096807;ZEB1:1.15015904149;SREBF1,2:1.1471074969;RREB1:1.14424639408;MYOD1:1.14264060375;RBPJ:1.13767925905;PAX3,7:1.12209102925;ZNF238:1.10241015425;POU2F1..3:1.09792889858;MZF1:1.07317142554;SNAI1..3:1.06081162261;ZNF143:1.0469299084;IRF1,2:1.0375772187;SPIB:1.02668413479;PBX1:1.01023761605;XCPE1{core}:0.949408194425;GFI1:0.926749695116;RFX2..5_RFXANK_RFXAP:0.917330093574;SOX{8,9,10}:0.911423787652;PAX6:0.84527733159;MYB:0.832049544933;E2F1..5:0.802429995976;SOX5:0.788657082322;FOXA2:0.784720590206;ATF2:0.763798864975;IRF7:0.760398845079;ZNF148:0.743408040643;MYFfamily:0.702929493118;SOX2:0.70223757977;IKZF2:0.680513531973;TFAP4:0.677222812784;HSF1,2:0.66454150196;FOX{F1,F2,J1}:0.628922021834;JUN:0.627735479491;ATF4:0.626874206961;ELK1,4_GABP{A,B1}:0.621207899298;LEF1_TCF7_TCF7L1,2:0.583836159519;AR:0.569714570979;CREB1:0.569652484073;MED-1{core}:0.526049905955;NKX6-1,2:0.520865670607;EGR1..3:0.517457883394;MTE{core}:0.465328346349;FOXP3:0.433311577908;FOXP1:0.427021403247;ZNF384:0.406784963034;NFATC1..3:0.367880527024;ATF5_CREB3:0.317826090252;ZFP161:0.294970997477;NKX2-1,4:0.27489026312;NFKB1_REL_RELA:0.259116626757;EN1,2:0.239081888409;NANOG{mouse}:0.230013354698;MYBL2:0.213785034952;SRF:0.201650315399;NKX2-3_NKX2-5:0.175732559082;POU5F1:0.149553903844;AIRE:0.146831809487;DBP:0.133822912026;NHLH1,2:0.121439796429;TOPORS:0.0932596687468;CDX1,2,4:0.0929889751152;PRDM1:0.0862775040755;GTF2I:0.0166192457498;GTF2A1,2:0.0105907340686;TP53:0.00064029286149;PAX2:-0.00771868797615;HAND1,2:-0.0284266768699;POU3F1..4:-0.044783694041;CUX2:-0.0631808509699;MAFB:-0.0638543461061;MEF2{A,B,C,D}:-0.0722293048209;TBX4,5:-0.106505413647;TFCP2:-0.117838741344;GFI1B:-0.122488604999;CRX:-0.134416006425;GATA4:-0.13570190984;STAT2,4,6:-0.137600593193;HIC1:-0.152158403777;ZBTB16:-0.152192590748;NANOG:-0.166595338429;TAL1_TCF{3,4,12}:-0.16929802603;VSX1,2:-0.188819391994;HMX1:-0.221755681987;FOX{I1,J2}:-0.225020601801;MTF1:-0.244092923252;FOXQ1:-0.244347018833;TFAP2B:-0.266014245235;HNF1A:-0.287124287167;NR3C1:-0.292627283615;PAX5:-0.294895731515;CDC5L:-0.308614497794;GCM1,2:-0.31096848847;HNF4A_NR2F1,2:-0.313423392352;TFDP1:-0.321988333387;TFAP2{A,C}:-0.324783908519;CEBPA,B_DDIT3:-0.324795495622;GLI1..3:-0.353902335581;POU1F1:-0.410714809971;REST:-0.428582639592;SOX17:-0.443704224311;POU6F1:-0.444843581672;NR5A1,2:-0.446868037269;ATF6:-0.452166778689;ARID5B:-0.465285556076;HES1:-0.46580142948;HOXA9_MEIS1:-0.478698946475;KLF4:-0.490179002296;PAX4:-0.492860490983;ESR1:-0.496029486528;OCT4_SOX2{dimer}:-0.499334814591;FOXM1:-0.500170193507;HIF1A:-0.536310139181;PITX1..3:-0.543307857805;NFIL3:-0.556315568032;HMGA1,2:-0.605094721728;YY1:-0.610302500839;AHR_ARNT_ARNT2:-0.61689651681;ZIC1..3:-0.6192413823;TEAD1:-0.634529809276;RFX1:-0.675730226368;PRRX1,2:-0.678191237823;EVI1:-0.688910151314;HLF:-0.704597382857;GZF1:-0.705667176951;bHLH_family:-0.720868215138;FOS_FOS{B,L1}_JUN{B,D}:-0.721371472125;EBF1:-0.757545217246;FOSL2:-0.821869362927;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.825482217421;TLX1..3_NFIC{dimer}:-0.839500626911;BACH2:-0.853158164317;FOXD3:-0.891055804651;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.929658327526;HOX{A6,A7,B6,B7}:-0.931482665126;FOXL1:-0.947075730671;NKX3-2:-0.956809982628;ALX4:-0.972390006854;NFE2:-0.980460419577;RXR{A,B,G}:-1.00122453146;NFE2L2:-1.0079141577;ZNF423:-1.136475041;PAX1,9:-1.16188149252;ALX1:-1.19118903963;NFIX:-1.22215824774;STAT5{A,B}:-1.32937678185;PAX8:-1.34603391875;ADNP_IRX_SIX_ZHX:-1.35313636783;NR1H4:-1.3549257673;LHX3,4:-1.39091337443;NKX3-1:-1.40035194171;HOX{A4,D4}:-1.43551084981;ZBTB6:-1.43703734946;XBP1:-1.46908294541;NKX2-2,8:-1.4790333537;UFEwm:-1.49464474623;NR6A1:-1.51537862402;RXRA_VDR{dimer}:-1.52931720618;PDX1:-1.5556402753;IKZF1:-1.61144942891;TEF:-1.72320186589;NFE2L1:-1.82204747634;ONECUT1,2:-1.89565067391;PPARG:-1.92756669031;ESRRA:-2.10837016065;HOX{A5,B5}:-2.25128302993 | |top_motifs=TLX2:3.72434949324;NFY{A,B,C}:2.48460326807;TBP:2.33138856115;FOXO1,3,4:2.12581723215;ELF1,2,4:2.09301107077;LMO2:1.92040451403;RORA:1.76651908811;ETS1,2:1.7655837006;SP1:1.72438490764;TGIF1:1.70450495212;STAT1,3:1.56540712616;RUNX1..3:1.52070379162;HBP1_HMGB_SSRP1_UBTF:1.50467093538;SPZ1:1.46761157441;GATA6:1.45013710444;PATZ1:1.44984397345;SMAD1..7,9:1.41334943326;EP300:1.39791393415;BREu{core}:1.38496431209;BPTF:1.35758200096;DMAP1_NCOR{1,2}_SMARC:1.31781949541;MAZ:1.2431115645;FOXN1:1.19145459492;SPI1:1.18834342643;NRF1:1.1594112192;T:1.15424038537;FOX{D1,D2}:1.15193096807;ZEB1:1.15015904149;SREBF1,2:1.1471074969;RREB1:1.14424639408;MYOD1:1.14264060375;RBPJ:1.13767925905;PAX3,7:1.12209102925;ZNF238:1.10241015425;POU2F1..3:1.09792889858;MZF1:1.07317142554;SNAI1..3:1.06081162261;ZNF143:1.0469299084;IRF1,2:1.0375772187;SPIB:1.02668413479;PBX1:1.01023761605;XCPE1{core}:0.949408194425;GFI1:0.926749695116;RFX2..5_RFXANK_RFXAP:0.917330093574;SOX{8,9,10}:0.911423787652;PAX6:0.84527733159;MYB:0.832049544933;E2F1..5:0.802429995976;SOX5:0.788657082322;FOXA2:0.784720590206;ATF2:0.763798864975;IRF7:0.760398845079;ZNF148:0.743408040643;MYFfamily:0.702929493118;SOX2:0.70223757977;IKZF2:0.680513531973;TFAP4:0.677222812784;HSF1,2:0.66454150196;FOX{F1,F2,J1}:0.628922021834;JUN:0.627735479491;ATF4:0.626874206961;ELK1,4_GABP{A,B1}:0.621207899298;LEF1_TCF7_TCF7L1,2:0.583836159519;AR:0.569714570979;CREB1:0.569652484073;MED-1{core}:0.526049905955;NKX6-1,2:0.520865670607;EGR1..3:0.517457883394;MTE{core}:0.465328346349;FOXP3:0.433311577908;FOXP1:0.427021403247;ZNF384:0.406784963034;NFATC1..3:0.367880527024;ATF5_CREB3:0.317826090252;ZFP161:0.294970997477;NKX2-1,4:0.27489026312;NFKB1_REL_RELA:0.259116626757;EN1,2:0.239081888409;NANOG{mouse}:0.230013354698;MYBL2:0.213785034952;SRF:0.201650315399;NKX2-3_NKX2-5:0.175732559082;POU5F1:0.149553903844;AIRE:0.146831809487;DBP:0.133822912026;NHLH1,2:0.121439796429;TOPORS:0.0932596687468;CDX1,2,4:0.0929889751152;PRDM1:0.0862775040755;GTF2I:0.0166192457498;GTF2A1,2:0.0105907340686;TP53:0.00064029286149;PAX2:-0.00771868797615;HAND1,2:-0.0284266768699;POU3F1..4:-0.044783694041;CUX2:-0.0631808509699;MAFB:-0.0638543461061;MEF2{A,B,C,D}:-0.0722293048209;TBX4,5:-0.106505413647;TFCP2:-0.117838741344;GFI1B:-0.122488604999;CRX:-0.134416006425;GATA4:-0.13570190984;STAT2,4,6:-0.137600593193;HIC1:-0.152158403777;ZBTB16:-0.152192590748;NANOG:-0.166595338429;TAL1_TCF{3,4,12}:-0.16929802603;VSX1,2:-0.188819391994;HMX1:-0.221755681987;FOX{I1,J2}:-0.225020601801;MTF1:-0.244092923252;FOXQ1:-0.244347018833;TFAP2B:-0.266014245235;HNF1A:-0.287124287167;NR3C1:-0.292627283615;PAX5:-0.294895731515;CDC5L:-0.308614497794;GCM1,2:-0.31096848847;HNF4A_NR2F1,2:-0.313423392352;TFDP1:-0.321988333387;TFAP2{A,C}:-0.324783908519;CEBPA,B_DDIT3:-0.324795495622;GLI1..3:-0.353902335581;POU1F1:-0.410714809971;REST:-0.428582639592;SOX17:-0.443704224311;POU6F1:-0.444843581672;NR5A1,2:-0.446868037269;ATF6:-0.452166778689;ARID5B:-0.465285556076;HES1:-0.46580142948;HOXA9_MEIS1:-0.478698946475;KLF4:-0.490179002296;PAX4:-0.492860490983;ESR1:-0.496029486528;OCT4_SOX2{dimer}:-0.499334814591;FOXM1:-0.500170193507;HIF1A:-0.536310139181;PITX1..3:-0.543307857805;NFIL3:-0.556315568032;HMGA1,2:-0.605094721728;YY1:-0.610302500839;AHR_ARNT_ARNT2:-0.61689651681;ZIC1..3:-0.6192413823;TEAD1:-0.634529809276;RFX1:-0.675730226368;PRRX1,2:-0.678191237823;EVI1:-0.688910151314;HLF:-0.704597382857;GZF1:-0.705667176951;bHLH_family:-0.720868215138;FOS_FOS{B,L1}_JUN{B,D}:-0.721371472125;EBF1:-0.757545217246;FOSL2:-0.821869362927;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.825482217421;TLX1..3_NFIC{dimer}:-0.839500626911;BACH2:-0.853158164317;FOXD3:-0.891055804651;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.929658327526;HOX{A6,A7,B6,B7}:-0.931482665126;FOXL1:-0.947075730671;NKX3-2:-0.956809982628;ALX4:-0.972390006854;NFE2:-0.980460419577;RXR{A,B,G}:-1.00122453146;NFE2L2:-1.0079141577;ZNF423:-1.136475041;PAX1,9:-1.16188149252;ALX1:-1.19118903963;NFIX:-1.22215824774;STAT5{A,B}:-1.32937678185;PAX8:-1.34603391875;ADNP_IRX_SIX_ZHX:-1.35313636783;NR1H4:-1.3549257673;LHX3,4:-1.39091337443;NKX3-1:-1.40035194171;HOX{A4,D4}:-1.43551084981;ZBTB6:-1.43703734946;XBP1:-1.46908294541;NKX2-2,8:-1.4790333537;UFEwm:-1.49464474623;NR6A1:-1.51537862402;RXRA_VDR{dimer}:-1.52931720618;PDX1:-1.5556402753;IKZF1:-1.61144942891;TEF:-1.72320186589;NFE2L1:-1.82204747634;ONECUT1,2:-1.89565067391;PPARG:-1.92756669031;ESRRA:-2.10837016065;HOX{A5,B5}:-2.25128302993 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10043-101F7;search_select_hide=table117:FF:10043-101F7 | |||
}} | }} | ||
Latest revision as of 12:16, 3 June 2020
| Name: | thymus, fetal, pool1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10650 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10650
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10650
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0341 |
| 10 | 10 | 0.104 |
| 100 | 100 | 0.346 |
| 101 | 101 | 0.8 |
| 102 | 102 | 0.991 |
| 103 | 103 | 0.263 |
| 104 | 104 | 0.864 |
| 105 | 105 | 0.444 |
| 106 | 106 | 0.00905 |
| 107 | 107 | 0.055 |
| 108 | 108 | 0.213 |
| 109 | 109 | 0.0816 |
| 11 | 11 | 0.143 |
| 110 | 110 | 0.0992 |
| 111 | 111 | 0.0277 |
| 112 | 112 | 0.139 |
| 113 | 113 | 0.149 |
| 114 | 114 | 4.04424e-4 |
| 115 | 115 | 0.131 |
| 116 | 116 | 0.137 |
| 117 | 117 | 0.681 |
| 118 | 118 | 0.116 |
| 119 | 119 | 0.115 |
| 12 | 12 | 0.739 |
| 120 | 120 | 0.348 |
| 121 | 121 | 0.133 |
| 122 | 122 | 0.616 |
| 123 | 123 | 0.699 |
| 124 | 124 | 0.318 |
| 125 | 125 | 0.406 |
| 126 | 126 | 0.571 |
| 127 | 127 | 0.806 |
| 128 | 128 | 0.0652 |
| 129 | 129 | 0.819 |
| 13 | 13 | 0.248 |
| 130 | 130 | 0.0247 |
| 131 | 131 | 0.745 |
| 132 | 132 | 0.768 |
| 133 | 133 | 0.592 |
| 134 | 134 | 0.764 |
| 135 | 135 | 0.0915 |
| 136 | 136 | 0.739 |
| 137 | 137 | 0.307 |
| 138 | 138 | 0.585 |
| 139 | 139 | 0.0822 |
| 14 | 14 | 0.664 |
| 140 | 140 | 0.0178 |
| 141 | 141 | 0.129 |
| 142 | 142 | 0.088 |
| 143 | 143 | 0.784 |
| 144 | 144 | 0.429 |
| 145 | 145 | 0.431 |
| 146 | 146 | 0.562 |
| 147 | 147 | 0.242 |
| 148 | 148 | 0.079 |
| 149 | 149 | 0.0713 |
| 15 | 15 | 0.16 |
| 150 | 150 | 0.359 |
| 151 | 151 | 0.538 |
| 152 | 152 | 0.0355 |
| 153 | 153 | 0.978 |
| 154 | 154 | 0.438 |
| 155 | 155 | 0.415 |
| 156 | 156 | 0.304 |
| 157 | 157 | 0.324 |
| 158 | 158 | 0.966 |
| 159 | 159 | 0.882 |
| 16 | 16 | 0.0759 |
| 160 | 160 | 0.0982 |
| 161 | 161 | 0.74 |
| 162 | 162 | 0.365 |
| 163 | 163 | 0.636 |
| 164 | 164 | 0.0182 |
| 165 | 165 | 0.972 |
| 166 | 166 | 0.655 |
| 167 | 167 | 0.0788 |
| 168 | 168 | 0.454 |
| 169 | 169 | 0.00121 |
| 17 | 17 | 0.152 |
| 18 | 18 | 0.0468 |
| 19 | 19 | 0.025 |
| 2 | 2 | 0.786 |
| 20 | 20 | 0.236 |
| 21 | 21 | 0.608 |
| 22 | 22 | 0.152 |
| 23 | 23 | 0.293 |
| 24 | 24 | 0.856 |
| 25 | 25 | 0.694 |
| 26 | 26 | 0.122 |
| 27 | 27 | 0.542 |
| 28 | 28 | 0.741 |
| 29 | 29 | 0.291 |
| 3 | 3 | 0.221 |
| 30 | 30 | 0.505 |
| 31 | 31 | 0.339 |
| 32 | 32 | 0.00731 |
| 33 | 33 | 0.38 |
| 34 | 34 | 0.974 |
| 35 | 35 | 0.246 |
| 36 | 36 | 0.103 |
| 37 | 37 | 0.0382 |
| 38 | 38 | 0.508 |
| 39 | 39 | 0.285 |
| 4 | 4 | 0.938 |
| 40 | 40 | 0.281 |
| 41 | 41 | 0.435 |
| 42 | 42 | 0.87 |
| 43 | 43 | 0.229 |
| 44 | 44 | 0.483 |
| 45 | 45 | 0.847 |
| 46 | 46 | 0.0755 |
| 47 | 47 | 0.296 |
| 48 | 48 | 0.475 |
| 49 | 49 | 0.289 |
| 5 | 5 | 0.314 |
| 50 | 50 | 0.959 |
| 51 | 51 | 0.452 |
| 52 | 52 | 0.51 |
| 53 | 53 | 0.646 |
| 54 | 54 | 0.426 |
| 55 | 55 | 0.234 |
| 56 | 56 | 0.721 |
| 57 | 57 | 0.0544 |
| 58 | 58 | 0.888 |
| 59 | 59 | 0.182 |
| 6 | 6 | 0.626 |
| 60 | 60 | 0.352 |
| 61 | 61 | 0.854 |
| 62 | 62 | 0.553 |
| 63 | 63 | 0.288 |
| 64 | 64 | 0.245 |
| 65 | 65 | 0.261 |
| 66 | 66 | 0.198 |
| 67 | 67 | 0.166 |
| 68 | 68 | 0.448 |
| 69 | 69 | 0.508 |
| 7 | 7 | 0.862 |
| 70 | 70 | 0.0119 |
| 71 | 71 | 0.0636 |
| 72 | 72 | 0.49 |
| 73 | 73 | 0.015 |
| 74 | 74 | 0.574 |
| 75 | 75 | 0.231 |
| 76 | 76 | 0.19 |
| 77 | 77 | 0.0416 |
| 78 | 78 | 0.663 |
| 79 | 79 | 0.289 |
| 8 | 8 | 0.00402 |
| 80 | 80 | 0.0055 |
| 81 | 81 | 0.304 |
| 82 | 82 | 0.247 |
| 83 | 83 | 0.865 |
| 84 | 84 | 0.337 |
| 85 | 85 | 0.0184 |
| 86 | 86 | 0.914 |
| 87 | 87 | 0.375 |
| 88 | 88 | 0.323 |
| 89 | 89 | 0.00868 |
| 9 | 9 | 0.933 |
| 90 | 90 | 0.0485 |
| 91 | 91 | 0.563 |
| 92 | 92 | 0.158 |
| 93 | 93 | 0.82 |
| 94 | 94 | 0.246 |
| 95 | 95 | 0.184 |
| 96 | 96 | 0.813 |
| 97 | 97 | 0.624 |
| 98 | 98 | 0.0718 |
| 99 | 99 | 0.141 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10650
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010043 human thymus - fetal sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002370 (thymus)
0000479 (tissue)
0004119 (endoderm-derived structure)
0000062 (organ)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000077 (mixed endoderm/mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002368 (endocrine gland)
0004177 (hemopoietic organ)
0005057 (immune organ)
0002530 (gland)
0005058 (hemolymphoid system gland)
0010317 (germ layer / neural crest derived structure)
0000153 (anterior region of body)
0002390 (hematopoietic system)
0000949 (endocrine system)
0002193 (hemolymphoid system)
0002405 (immune system)
0009113 (thymic region)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010043 (human thymus - fetal sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006595 (presumptive endoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0010316 (germ layer / neural crest)
