FF:10205-103F7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004893 | ||
|accession_numbers=CAGE;DRX008660;DRR009532;DRZ000957;DRZ002342;DRZ012307;DRZ013692 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0007100,UBERON:0000948,UBERON:0002135,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0010313,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0003978,UBERON:0000946,UBERON:0002133,UBERON:0010317,UBERON:0004535,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010205 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%2520-%2520mitral%2520valve%252c%2520adult.CNhs12855.10205-103F7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%2520-%2520mitral%2520valve%252c%2520adult.CNhs12855.10205-103F7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/heart%2520-%2520mitral%2520valve%252c%2520adult.CNhs12855.10205-103F7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/heart%2520-%2520mitral%2520valve%252c%2520adult.CNhs12855.10205-103F7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/heart%2520-%2520mitral%2520valve%252c%2520adult.CNhs12855.10205-103F7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10205-103F7 | |id=FF:10205-103F7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010205 | ||
|is_obsolete= | |||
|library_id=CNhs12855 | |||
|library_id_phase_based=2:CNhs12855 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10205 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10205 | |||
|name=heart - mitral valve, adult | |name=heart - mitral valve, adult | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12855,LSID973,release012,COMPLETED | |profile_hcage=CNhs12855,LSID973,release012,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number=R1234131-10 | |rna_catalog_number=R1234131-10 | ||
| Line 56: | Line 78: | ||
|rna_tube_id=103F7 | |rna_tube_id=103F7 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age=41 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.86652695831045e-236!GO:0005737;cytoplasm;9.49927251391576e-178!GO:0043226;organelle;8.84905332141039e-128!GO:0043229;intracellular organelle;1.72435713802731e-127!GO:0044444;cytoplasmic part;1.15967162536942e-116!GO:0043231;intracellular membrane-bound organelle;1.34131998797117e-113!GO:0043227;membrane-bound organelle;1.45882876187255e-113!GO:0005515;protein binding;8.93548369824454e-97!GO:0044422;organelle part;5.08081689174312e-78!GO:0044446;intracellular organelle part;6.91094618396208e-77!GO:0032991;macromolecular complex;1.47358688037072e-64!GO:0005739;mitochondrion;2.78525697504177e-49!GO:0030529;ribonucleoprotein complex;1.33751710151895e-45!GO:0044238;primary metabolic process;5.96356553589828e-45!GO:0044237;cellular metabolic process;2.44112091887856e-44!GO:0043233;organelle lumen;1.86189772085492e-43!GO:0031974;membrane-enclosed lumen;1.86189772085492e-43!GO:0003723;RNA binding;2.71244124111148e-43!GO:0043170;macromolecule metabolic process;4.58169726149158e-42!GO:0016043;cellular component organization and biogenesis;5.92997081505535e-42!GO:0044429;mitochondrial part;1.39546368686452e-36!GO:0031090;organelle membrane;1.63949017563283e-36!GO:0019538;protein metabolic process;2.89257013685826e-36!GO:0043234;protein complex;1.32567424429148e-35!GO:0005634;nucleus;8.48650532934208e-34!GO:0044428;nuclear part;8.76326655042063e-34!GO:0031967;organelle envelope;1.00669066963331e-32!GO:0033036;macromolecule localization;1.3562746356506e-32!GO:0031975;envelope;1.8172543018628e-32!GO:0044260;cellular macromolecule metabolic process;8.92418657398858e-32!GO:0015031;protein transport;1.30367918343857e-31!GO:0044267;cellular protein metabolic process;4.96871257742805e-30!GO:0008104;protein localization;6.14438115579917e-30!GO:0045184;establishment of protein localization;7.28525837114049e-30!GO:0046907;intracellular transport;1.01919484915849e-28!GO:0005840;ribosome;2.25554419090992e-27!GO:0006412;translation;5.30429352252016e-27!GO:0005829;cytosol;3.49199002349038e-26!GO:0005740;mitochondrial envelope;1.80725840310363e-25!GO:0016071;mRNA metabolic process;2.84121220988165e-25!GO:0031966;mitochondrial membrane;5.84755233852519e-25!GO:0008380;RNA splicing;2.39360465162685e-23!GO:0003735;structural constituent of ribosome;2.65410513057617e-23!GO:0006396;RNA processing;3.75913364303553e-23!GO:0006886;intracellular protein transport;4.6315145594097e-23!GO:0019866;organelle inner membrane;1.60587214253127e-22!GO:0005743;mitochondrial inner membrane;8.16287841501477e-22!GO:0031981;nuclear lumen;4.78240754071297e-21!GO:0033279;ribosomal subunit;5.88913516268429e-21!GO:0009059;macromolecule biosynthetic process;1.12473583543232e-20!GO:0006119;oxidative phosphorylation;1.20566679881263e-20!GO:0006397;mRNA processing;2.33359275402942e-20!GO:0043283;biopolymer metabolic process;7.39548174366187e-20!GO:0044249;cellular biosynthetic process;8.2812954848134e-20!GO:0065003;macromolecular complex assembly;1.21910204434699e-19!GO:0009058;biosynthetic process;2.57073176789912e-19!GO:0022607;cellular component assembly;4.32691494203204e-19!GO:0008092;cytoskeletal protein binding;5.02651265579013e-19!GO:0010467;gene expression;6.91686395270968e-19!GO:0051641;cellular localization;7.02958394214961e-19!GO:0051649;establishment of cellular localization;9.61272510229701e-19!GO:0005746;mitochondrial respiratory chain;3.34753687619778e-18!GO:0000166;nucleotide binding;3.78936272905468e-18!GO:0043228;non-membrane-bound organelle;4.10142955447509e-18!GO:0043232;intracellular non-membrane-bound organelle;4.10142955447509e-18!GO:0044455;mitochondrial membrane part;4.11958588511452e-18!GO:0008134;transcription factor binding;6.00203212387563e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.4814287164609e-16!GO:0050136;NADH dehydrogenase (quinone) activity;4.87286408157949e-16!GO:0003954;NADH dehydrogenase activity;4.87286408157949e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.87286408157949e-16!GO:0006996;organelle organization and biogenesis;5.19330781742985e-16!GO:0005681;spliceosome;1.00381066661554e-15!GO:0005783;endoplasmic reticulum;1.43741906941646e-15!GO:0048770;pigment granule;1.57785821938699e-15!GO:0042470;melanosome;1.57785821938699e-15!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.07602505715122e-15!GO:0016192;vesicle-mediated transport;2.22010149696648e-15!GO:0005794;Golgi apparatus;3.65852020458795e-15!GO:0044445;cytosolic part;8.53387334407498e-15!GO:0048523;negative regulation of cellular process;1.72570382732084e-14!GO:0031980;mitochondrial lumen;1.7511104057523e-14!GO:0005759;mitochondrial matrix;1.7511104057523e-14!GO:0006457;protein folding;1.75954404278461e-14!GO:0005654;nucleoplasm;3.3155536213746e-14!GO:0030964;NADH dehydrogenase complex (quinone);6.72894593418589e-14!GO:0045271;respiratory chain complex I;6.72894593418589e-14!GO:0005747;mitochondrial respiratory chain complex I;6.72894593418589e-14!GO:0022613;ribonucleoprotein complex biogenesis and assembly;7.8538759075394e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.18090330825482e-13!GO:0016462;pyrophosphatase activity;1.43752359445927e-13!GO:0042775;organelle ATP synthesis coupled electron transport;1.46894267514847e-13!GO:0042773;ATP synthesis coupled electron transport;1.46894267514847e-13!GO:0017111;nucleoside-triphosphatase activity;1.61552020344559e-13!GO:0016817;hydrolase activity, acting on acid anhydrides;1.79743769831801e-13!GO:0012505;endomembrane system;2.09183891352629e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.10862336458221e-13!GO:0006605;protein targeting;6.65136930766597e-13!GO:0048519;negative regulation of biological process;1.16566642590681e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;1.19048289163886e-12!GO:0006512;ubiquitin cycle;1.50212273467415e-12!GO:0044451;nucleoplasm part;1.52038382219519e-12!GO:0022618;protein-RNA complex assembly;1.63594509526358e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.69043301399257e-12!GO:0044265;cellular macromolecule catabolic process;1.72546571939528e-12!GO:0019941;modification-dependent protein catabolic process;2.16095357601985e-12!GO:0043632;modification-dependent macromolecule catabolic process;2.16095357601985e-12!GO:0017076;purine nucleotide binding;2.3142327844471e-12!GO:0048193;Golgi vesicle transport;2.32869194358043e-12!GO:0032553;ribonucleotide binding;3.20133986855146e-12!GO:0032555;purine ribonucleotide binding;3.20133986855146e-12!GO:0044257;cellular protein catabolic process;3.4407020452561e-12!GO:0006511;ubiquitin-dependent protein catabolic process;3.44718961479925e-12!GO:0008135;translation factor activity, nucleic acid binding;3.81799137957255e-12!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.43285905410419e-12!GO:0003779;actin binding;8.47549282000052e-12!GO:0043412;biopolymer modification;1.65105937818493e-11!GO:0016874;ligase activity;1.97265211468296e-11!GO:0050789;regulation of biological process;2.46312682779594e-11!GO:0043687;post-translational protein modification;2.49630961896376e-11!GO:0030029;actin filament-based process;3.14112418194868e-11!GO:0015935;small ribosomal subunit;3.41488740462665e-11!GO:0003712;transcription cofactor activity;6.86855098829572e-11!GO:0015934;large ribosomal subunit;8.66256991745391e-11!GO:0051082;unfolded protein binding;9.18209273745752e-11!GO:0006464;protein modification process;1.19044057211295e-10!GO:0030036;actin cytoskeleton organization and biogenesis;1.63173757667815e-10!GO:0012501;programmed cell death;2.27681040266831e-10!GO:0015629;actin cytoskeleton;2.31263058345745e-10!GO:0006913;nucleocytoplasmic transport;3.68357284369425e-10!GO:0006915;apoptosis;4.34158296304363e-10!GO:0051186;cofactor metabolic process;4.36484607731779e-10!GO:0016564;transcription repressor activity;4.83360755006823e-10!GO:0044432;endoplasmic reticulum part;5.59926294601354e-10!GO:0008219;cell death;5.75672822294526e-10!GO:0016265;death;5.75672822294526e-10!GO:0006793;phosphorus metabolic process;5.98431268621593e-10!GO:0006796;phosphate metabolic process;5.98431268621593e-10!GO:0050794;regulation of cellular process;7.274386892207e-10!GO:0006366;transcription from RNA polymerase II promoter;7.66497952113088e-10!GO:0051169;nuclear transport;7.77996193130963e-10!GO:0043285;biopolymer catabolic process;9.42296264212456e-10!GO:0044248;cellular catabolic process;1.03586438694868e-09!GO:0009055;electron carrier activity;1.14442501068867e-09!GO:0000502;proteasome complex (sensu Eukaryota);3.1332239472517e-09!GO:0015980;energy derivation by oxidation of organic compounds;3.29154647595157e-09!GO:0003743;translation initiation factor activity;3.70094796425888e-09!GO:0016604;nuclear body;3.70572230314862e-09!GO:0006461;protein complex assembly;4.79649314582681e-09!GO:0045333;cellular respiration;5.25385569638663e-09!GO:0009057;macromolecule catabolic process;5.69353161199213e-09!GO:0065007;biological regulation;6.76763088948886e-09!GO:0030163;protein catabolic process;7.0011468252446e-09!GO:0008565;protein transporter activity;1.06193682959181e-08!GO:0031252;leading edge;1.06288471305472e-08!GO:0006446;regulation of translational initiation;1.07785526288006e-08!GO:0016310;phosphorylation;1.48212329981663e-08!GO:0006413;translational initiation;1.59761465630183e-08!GO:0005761;mitochondrial ribosome;1.63362090387084e-08!GO:0000313;organellar ribosome;1.63362090387084e-08!GO:0009060;aerobic respiration;2.16005459174141e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.22170543544452e-08!GO:0017038;protein import;2.4005741318177e-08!GO:0016607;nuclear speck;2.85935952427476e-08!GO:0030554;adenyl nucleotide binding;3.11766756540738e-08!GO:0005788;endoplasmic reticulum lumen;3.26869616832034e-08!GO:0003714;transcription corepressor activity;3.32248439380956e-08!GO:0032559;adenyl ribonucleotide binding;3.59475056390432e-08!GO:0005635;nuclear envelope;3.86050877671265e-08!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.46103262918987e-08!GO:0005793;ER-Golgi intermediate compartment;4.47315840827595e-08!GO:0008639;small protein conjugating enzyme activity;5.34822146227864e-08!GO:0006732;coenzyme metabolic process;6.64492133854441e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.06878153950282e-08!GO:0005524;ATP binding;7.06878153950282e-08!GO:0006091;generation of precursor metabolites and energy;7.39266011708475e-08!GO:0004842;ubiquitin-protein ligase activity;7.86247897173562e-08!GO:0003924;GTPase activity;8.05406920274022e-08!GO:0016070;RNA metabolic process;8.75884498217217e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;9.96446297630575e-08!GO:0000375;RNA splicing, via transesterification reactions;9.96446297630575e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.96446297630575e-08!GO:0008361;regulation of cell size;1.00252282767052e-07!GO:0031982;vesicle;1.10182091553257e-07!GO:0016049;cell growth;1.34788748476157e-07!GO:0031988;membrane-bound vesicle;1.3561404225951e-07!GO:0007010;cytoskeleton organization and biogenesis;1.50054353810708e-07!GO:0031965;nuclear membrane;1.54594498536357e-07!GO:0005730;nucleolus;1.65980420556719e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.95396269783413e-07!GO:0019787;small conjugating protein ligase activity;2.16356931053012e-07!GO:0031410;cytoplasmic vesicle;2.23605287061822e-07!GO:0016023;cytoplasmic membrane-bound vesicle;2.25015125727124e-07!GO:0006099;tricarboxylic acid cycle;3.14955849400321e-07!GO:0046356;acetyl-CoA catabolic process;3.14955849400321e-07!GO:0007264;small GTPase mediated signal transduction;3.21269404781151e-07!GO:0006084;acetyl-CoA metabolic process;3.65752913637016e-07!GO:0019829;cation-transporting ATPase activity;4.64735505553808e-07!GO:0006606;protein import into nucleus;4.95395542781422e-07!GO:0019899;enzyme binding;6.65756271501455e-07!GO:0051246;regulation of protein metabolic process;7.72798664981351e-07!GO:0051170;nuclear import;8.3148019660685e-07!GO:0031324;negative regulation of cellular metabolic process;8.71826201137227e-07!GO:0009892;negative regulation of metabolic process;1.05969610349402e-06!GO:0007517;muscle development;1.07117156853841e-06!GO:0016887;ATPase activity;1.22490702772135e-06!GO:0051789;response to protein stimulus;1.28168337767506e-06!GO:0006986;response to unfolded protein;1.28168337767506e-06!GO:0015986;ATP synthesis coupled proton transport;1.42832372608111e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.42832372608111e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.7063412411341e-06!GO:0009109;coenzyme catabolic process;2.01449616919753e-06!GO:0001558;regulation of cell growth;2.02674122626734e-06!GO:0003676;nucleic acid binding;2.2990805611681e-06!GO:0051187;cofactor catabolic process;2.68401454213503e-06!GO:0005525;GTP binding;2.91849198620421e-06!GO:0045259;proton-transporting ATP synthase complex;2.93029442141965e-06!GO:0005768;endosome;3.61638240058676e-06!GO:0042623;ATPase activity, coupled;4.27202492037288e-06!GO:0046034;ATP metabolic process;4.51552983032024e-06!GO:0006888;ER to Golgi vesicle-mediated transport;4.72171217067143e-06!GO:0042981;regulation of apoptosis;5.08322390991622e-06!GO:0043069;negative regulation of programmed cell death;5.22841250969486e-06!GO:0009966;regulation of signal transduction;5.52718246316392e-06!GO:0043067;regulation of programmed cell death;5.86650001123308e-06!GO:0016481;negative regulation of transcription;5.96763601611643e-06!GO:0044431;Golgi apparatus part;6.23911901116527e-06!GO:0007243;protein kinase cascade;7.38211133088334e-06!GO:0016881;acid-amino acid ligase activity;7.38211133088334e-06!GO:0043066;negative regulation of apoptosis;7.49230026167993e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;7.83576408698533e-06!GO:0009144;purine nucleoside triphosphate metabolic process;7.83576408698533e-06!GO:0016469;proton-transporting two-sector ATPase complex;7.88195365142385e-06!GO:0009199;ribonucleoside triphosphate metabolic process;8.47774365420638e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;8.60302139914285e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;8.72352537563094e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;9.26170542733303e-06!GO:0016044;membrane organization and biogenesis;9.68385088149951e-06!GO:0007265;Ras protein signal transduction;9.79492204363102e-06!GO:0009141;nucleoside triphosphate metabolic process;1.28569944473405e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.52330488219963e-05!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.73660611643669e-05!GO:0032561;guanyl ribonucleotide binding;1.78042986274588e-05!GO:0019001;guanyl nucleotide binding;1.78042986274588e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.79493903146098e-05!GO:0005789;endoplasmic reticulum membrane;1.87183449932011e-05!GO:0006916;anti-apoptosis;1.97302292394025e-05!GO:0006163;purine nucleotide metabolic process;2.04509522048922e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.09160549739241e-05!GO:0009150;purine ribonucleotide metabolic process;2.18553278770047e-05!GO:0030120;vesicle coat;2.27178565278495e-05!GO:0030662;coated vesicle membrane;2.27178565278495e-05!GO:0045786;negative regulation of progression through cell cycle;2.28915748829279e-05!GO:0048475;coated membrane;2.43958671696281e-05!GO:0030117;membrane coat;2.43958671696281e-05!GO:0009056;catabolic process;2.71657795317711e-05!GO:0044453;nuclear membrane part;2.84189714709064e-05!GO:0051128;regulation of cellular component organization and biogenesis;3.30802745570835e-05!GO:0006754;ATP biosynthetic process;4.05646334486017e-05!GO:0006753;nucleoside phosphate metabolic process;4.05646334486017e-05!GO:0040008;regulation of growth;4.54625528839323e-05!GO:0005741;mitochondrial outer membrane;4.87426526928713e-05!GO:0009259;ribonucleotide metabolic process;5.39036580308694e-05!GO:0005773;vacuole;5.70432208153545e-05!GO:0001726;ruffle;7.35741502321211e-05!GO:0051188;cofactor biosynthetic process;7.35741502321211e-05!GO:0030016;myofibril;7.35741502321211e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.51011666444173e-05!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.51011666444173e-05!GO:0044449;contractile fiber part;7.86044139109929e-05!GO:0005643;nuclear pore;7.97521732286422e-05!GO:0016491;oxidoreductase activity;7.99045240700154e-05!GO:0009142;nucleoside triphosphate biosynthetic process;8.10494923951516e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.10494923951516e-05!GO:0050657;nucleic acid transport;8.86601551637355e-05!GO:0051236;establishment of RNA localization;8.86601551637355e-05!GO:0050658;RNA transport;8.86601551637355e-05!GO:0006403;RNA localization;9.27373773389303e-05!GO:0006950;response to stress;9.29310804456784e-05!GO:0043292;contractile fiber;9.74195593358867e-05!GO:0016563;transcription activator activity;0.000114789434686538!GO:0019867;outer membrane;0.00011629197464463!GO:0004386;helicase activity;0.000119504607894093!GO:0030027;lamellipodium;0.00012097886239874!GO:0031968;organelle outer membrane;0.000121323354883918!GO:0005791;rough endoplasmic reticulum;0.000131032269435288!GO:0007242;intracellular signaling cascade;0.000136117998419806!GO:0005083;small GTPase regulator activity;0.000139774765730901!GO:0060047;heart contraction;0.000152057933768614!GO:0003015;heart process;0.000152057933768614!GO:0006259;DNA metabolic process;0.000157828196807921!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.00015862544440059!GO:0005798;Golgi-associated vesicle;0.000163863407235952!GO:0006897;endocytosis;0.000175968346291458!GO:0010324;membrane invagination;0.000175968346291458!GO:0006613;cotranslational protein targeting to membrane;0.000178195181499803!GO:0005856;cytoskeleton;0.000178195181499803!GO:0048522;positive regulation of cellular process;0.000182695022143273!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000192539745860257!GO:0000245;spliceosome assembly;0.00020322804991037!GO:0051427;hormone receptor binding;0.000205267373386778!GO:0048471;perinuclear region of cytoplasm;0.000216517257064458!GO:0001944;vasculature development;0.000226453794686349!GO:0065002;intracellular protein transport across a membrane;0.000227032823402745!GO:0043566;structure-specific DNA binding;0.000234130393917108!GO:0000323;lytic vacuole;0.000236517681706607!GO:0005764;lysosome;0.000236517681706607!GO:0045892;negative regulation of transcription, DNA-dependent;0.000236534447856327!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000241126216555949!GO:0030133;transport vesicle;0.000256935000107391!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000258305278553653!GO:0006164;purine nucleotide biosynthetic process;0.000261741498715396!GO:0005048;signal sequence binding;0.000261741498715396!GO:0000139;Golgi membrane;0.000265523121470254!GO:0005770;late endosome;0.000269219151208179!GO:0030695;GTPase regulator activity;0.000289358512278091!GO:0009152;purine ribonucleotide biosynthetic process;0.000293625192249809!GO:0008026;ATP-dependent helicase activity;0.000303069829562305!GO:0046930;pore complex;0.000303768156402905!GO:0009108;coenzyme biosynthetic process;0.000307600635839061!GO:0005912;adherens junction;0.000307600635839061!GO:0044420;extracellular matrix part;0.000313085928692701!GO:0044262;cellular carbohydrate metabolic process;0.000328305214340321!GO:0001568;blood vessel development;0.000329432448666217!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000337582120739001!GO:0007266;Rho protein signal transduction;0.000337582120739001!GO:0003713;transcription coactivator activity;0.000357845487064026!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000381577245368879!GO:0035257;nuclear hormone receptor binding;0.000387331830795467!GO:0006979;response to oxidative stress;0.000422415569569275!GO:0030867;rough endoplasmic reticulum membrane;0.00044626899179452!GO:0031589;cell-substrate adhesion;0.000449235483576509!GO:0000151;ubiquitin ligase complex;0.000471484202567277!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000481372650937995!GO:0016859;cis-trans isomerase activity;0.000489138496433015!GO:0032446;protein modification by small protein conjugation;0.000534133669802158!GO:0045893;positive regulation of transcription, DNA-dependent;0.000535043456172948!GO:0016197;endosome transport;0.000540002735344667!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000569208410776597!GO:0008307;structural constituent of muscle;0.000645238593036957!GO:0005865;striated muscle thin filament;0.000654264057367092!GO:0044440;endosomal part;0.000768656088077864!GO:0010008;endosome membrane;0.000768656088077864!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000777323552887617!GO:0016567;protein ubiquitination;0.000820753138674877!GO:0030017;sarcomere;0.000822577599973993!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000833313489794882!GO:0004812;aminoacyl-tRNA ligase activity;0.000833313489794882!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000833313489794882!GO:0033673;negative regulation of kinase activity;0.000833513307779866!GO:0006469;negative regulation of protein kinase activity;0.000833513307779866!GO:0009260;ribonucleotide biosynthetic process;0.000870664675986583!GO:0005839;proteasome core complex (sensu Eukaryota);0.000885525352635344!GO:0048659;smooth muscle cell proliferation;0.000885525352635344!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000935935135442721!GO:0048518;positive regulation of biological process;0.000935935135442721!GO:0008016;regulation of heart contraction;0.000957625592411961!GO:0022890;inorganic cation transmembrane transporter activity;0.000964914434377174!GO:0030532;small nuclear ribonucleoprotein complex;0.00104139574644278!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00104139574644278!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00104139574644278!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00104139574644278!GO:0000902;cell morphogenesis;0.00104325366286798!GO:0032989;cellular structure morphogenesis;0.00104325366286798!GO:0051028;mRNA transport;0.001062503253665!GO:0003697;single-stranded DNA binding;0.00107166638172922!GO:0001725;stress fiber;0.00107382014619947!GO:0032432;actin filament bundle;0.00107382014619947!GO:0007160;cell-matrix adhesion;0.00109435063316842!GO:0003724;RNA helicase activity;0.0011080404429342!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00125471391163868!GO:0007507;heart development;0.00125976466967097!GO:0005762;mitochondrial large ribosomal subunit;0.00128421563173024!GO:0000315;organellar large ribosomal subunit;0.00128421563173024!GO:0035258;steroid hormone receptor binding;0.00140849588612808!GO:0043038;amino acid activation;0.00146471555997091!GO:0006418;tRNA aminoacylation for protein translation;0.00146471555997091!GO:0043039;tRNA aminoacylation;0.00146471555997091!GO:0045941;positive regulation of transcription;0.00148616225699695!GO:0016568;chromatin modification;0.0015898544077292!GO:0015630;microtubule cytoskeleton;0.00168476325294508!GO:0001666;response to hypoxia;0.00168476325294508!GO:0009117;nucleotide metabolic process;0.00172157769575489!GO:0051920;peroxiredoxin activity;0.00180834485084242!GO:0006635;fatty acid beta-oxidation;0.00187010788303764!GO:0005581;collagen;0.0018959432281276!GO:0051348;negative regulation of transferase activity;0.00196763566485888!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00201680110431195!GO:0015002;heme-copper terminal oxidase activity;0.00201680110431195!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00201680110431195!GO:0004129;cytochrome-c oxidase activity;0.00201680110431195!GO:0008286;insulin receptor signaling pathway;0.00201680110431195!GO:0043021;ribonucleoprotein binding;0.00201680110431195!GO:0008047;enzyme activator activity;0.00210243005401306!GO:0051287;NAD binding;0.00219058416161864!GO:0008654;phospholipid biosynthetic process;0.00221605834843163!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00236191332324658!GO:0042802;identical protein binding;0.00238399467665942!GO:0005769;early endosome;0.00238646015590815!GO:0006402;mRNA catabolic process;0.00243181961018525!GO:0007005;mitochondrion organization and biogenesis;0.00243181961018525!GO:0008287;protein serine/threonine phosphatase complex;0.00245782924403914!GO:0006607;NLS-bearing substrate import into nucleus;0.00250704161254948!GO:0048660;regulation of smooth muscle cell proliferation;0.00251355531463134!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00251863642301654!GO:0016853;isomerase activity;0.00258908975363117!GO:0004298;threonine endopeptidase activity;0.00274803481595149!GO:0031072;heat shock protein binding;0.00288632411480739!GO:0005813;centrosome;0.0029128026975178!GO:0019843;rRNA binding;0.00295227155327264!GO:0005905;coated pit;0.00295227155327264!GO:0033002;muscle cell proliferation;0.00309075294682333!GO:0051270;regulation of cell motility;0.0031116044485759!GO:0030518;steroid hormone receptor signaling pathway;0.0031116044485759!GO:0048644;muscle morphogenesis;0.00316664755430002!GO:0055008;cardiac muscle morphogensis;0.00316664755430002!GO:0006891;intra-Golgi vesicle-mediated transport;0.00327455424013084!GO:0006752;group transfer coenzyme metabolic process;0.0032972174147161!GO:0001516;prostaglandin biosynthetic process;0.00356613890431896!GO:0046457;prostanoid biosynthetic process;0.00356613890431896!GO:0045792;negative regulation of cell size;0.00380981678285481!GO:0005913;cell-cell adherens junction;0.00380981678285481!GO:0045045;secretory pathway;0.00383658590917907!GO:0008154;actin polymerization and/or depolymerization;0.00394396924337467!GO:0032780;negative regulation of ATPase activity;0.00402934764687563!GO:0043284;biopolymer biosynthetic process;0.00406493661800182!GO:0006693;prostaglandin metabolic process;0.00412508276419101!GO:0006692;prostanoid metabolic process;0.00412508276419101!GO:0007050;cell cycle arrest;0.00422662536377964!GO:0042254;ribosome biogenesis and assembly;0.00424846330779762!GO:0048468;cell development;0.00429281844748853!GO:0051726;regulation of cell cycle;0.00438964297484654!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0044021711932452!GO:0006414;translational elongation;0.0044021711932452!GO:0019902;phosphatase binding;0.00448266564925217!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00452679129688525!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00454974781924968!GO:0015399;primary active transmembrane transporter activity;0.00454974781924968!GO:0005885;Arp2/3 protein complex;0.00455886055708582!GO:0030308;negative regulation of cell growth;0.0045752805084458!GO:0000074;regulation of progression through cell cycle;0.0046795404808957!GO:0005096;GTPase activator activity;0.00480293389402217!GO:0003746;translation elongation factor activity;0.004834258555786!GO:0008250;oligosaccharyl transferase complex;0.0049162020623899!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00530582545303571!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00530582545303571!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00534266944204459!GO:0006612;protein targeting to membrane;0.00543577457462789!GO:0019904;protein domain specific binding;0.00557194617089587!GO:0005667;transcription factor complex;0.00579734648924845!GO:0008139;nuclear localization sequence binding;0.00583408893251736!GO:0006323;DNA packaging;0.00593198829597699!GO:0065009;regulation of a molecular function;0.00597825845246931!GO:0005100;Rho GTPase activator activity;0.0060506717226956!GO:0048514;blood vessel morphogenesis;0.00627058002924358!GO:0030134;ER to Golgi transport vesicle;0.00631122870946786!GO:0015631;tubulin binding;0.00631537779381813!GO:0000314;organellar small ribosomal subunit;0.00633625511790165!GO:0005763;mitochondrial small ribosomal subunit;0.00633625511790165!GO:0017166;vinculin binding;0.0067325809464195!GO:0016791;phosphoric monoester hydrolase activity;0.00683145048844153!GO:0003702;RNA polymerase II transcription factor activity;0.00702775766717543!GO:0019222;regulation of metabolic process;0.00730206667451679!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00730206667451679!GO:0004667;prostaglandin-D synthase activity;0.00730206667451679!GO:0050802;circadian sleep/wake cycle, sleep;0.00730206667451679!GO:0022410;circadian sleep/wake cycle process;0.00730206667451679!GO:0042749;regulation of circadian sleep/wake cycle;0.00730206667451679!GO:0005815;microtubule organizing center;0.00743086777935799!GO:0043488;regulation of mRNA stability;0.00754057504971529!GO:0043487;regulation of RNA stability;0.00754057504971529!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00760999218512325!GO:0033116;ER-Golgi intermediate compartment membrane;0.00772589851444443!GO:0050811;GABA receptor binding;0.00782820989806062!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00783108030048834!GO:0006892;post-Golgi vesicle-mediated transport;0.00810249795244529!GO:0019208;phosphatase regulator activity;0.00816484803006516!GO:0009967;positive regulation of signal transduction;0.00819901635918433!GO:0005523;tropomyosin binding;0.00819901635918433!GO:0051087;chaperone binding;0.00854764229545!GO:0003012;muscle system process;0.00854764229545!GO:0006936;muscle contraction;0.00854764229545!GO:0003729;mRNA binding;0.00856118747538048!GO:0030127;COPII vesicle coat;0.00864316207620599!GO:0012507;ER to Golgi transport vesicle membrane;0.00864316207620599!GO:0051168;nuclear export;0.00887743850820113!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00902145389055716!GO:0033043;regulation of organelle organization and biogenesis;0.00902145389055716!GO:0051252;regulation of RNA metabolic process;0.00911077052131123!GO:0017022;myosin binding;0.00912160643407468!GO:0003690;double-stranded DNA binding;0.00954704501114772!GO:0045926;negative regulation of growth;0.00954704501114772!GO:0030041;actin filament polymerization;0.00965593077088368!GO:0007049;cell cycle;0.00966177292521288!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00980508605424463!GO:0030663;COPI coated vesicle membrane;0.00980508605424463!GO:0030126;COPI vesicle coat;0.00980508605424463!GO:0040012;regulation of locomotion;0.010312093552943!GO:0045454;cell redox homeostasis;0.0103199085910249!GO:0043492;ATPase activity, coupled to movement of substances;0.0105112867927748!GO:0005862;muscle thin filament tropomyosin;0.0109807412166488!GO:0001525;angiogenesis;0.0110865467332423!GO:0048500;signal recognition particle;0.0111943629188506!GO:0040011;locomotion;0.0113491282406794!GO:0055010;ventricular cardiac muscle morphogenesis;0.0113766181338312!GO:0016301;kinase activity;0.0115713153192276!GO:0030521;androgen receptor signaling pathway;0.0115860373810257!GO:0030522;intracellular receptor-mediated signaling pathway;0.0116068938898576!GO:0042805;actinin binding;0.0120293512319729!GO:0043623;cellular protein complex assembly;0.0127628261078539!GO:0004576;oligosaccharyl transferase activity;0.0127628261078539!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0128947914209866!GO:0019395;fatty acid oxidation;0.0133318501849179!GO:0048154;S100 beta binding;0.013535206270249!GO:0008186;RNA-dependent ATPase activity;0.0137788271088217!GO:0032940;secretion by cell;0.0139385018310552!GO:0031901;early endosome membrane;0.0141350184257363!GO:0030049;muscle filament sliding;0.0148007892470064!GO:0033275;actin-myosin filament sliding;0.0148007892470064!GO:0006631;fatty acid metabolic process;0.0148007892470064!GO:0004674;protein serine/threonine kinase activity;0.0158296264051187!GO:0043681;protein import into mitochondrion;0.0158334253670436!GO:0006118;electron transport;0.0164956084343331!GO:0055003;cardiac myofibril assembly;0.0175693840803786!GO:0055013;cardiac muscle cell development;0.0175693840803786!GO:0012506;vesicle membrane;0.0178638995720862!GO:0030132;clathrin coat of coated pit;0.0178638995720862!GO:0005869;dynactin complex;0.0178638995720862!GO:0005604;basement membrane;0.0178872705322832!GO:0043407;negative regulation of MAP kinase activity;0.0180878149547494!GO:0016311;dephosphorylation;0.0180878149547494!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0182802244533889!GO:0009893;positive regulation of metabolic process;0.0185353545936038!GO:0051539;4 iron, 4 sulfur cluster binding;0.0188440729166621!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.018974298142394!GO:0031674;I band;0.018974298142394!GO:0006401;RNA catabolic process;0.018974298142394!GO:0048487;beta-tubulin binding;0.018974298142394!GO:0030659;cytoplasmic vesicle membrane;0.0197146095202375!GO:0030137;COPI-coated vesicle;0.0206567179499811!GO:0004721;phosphoprotein phosphatase activity;0.0206582945379587!GO:0030658;transport vesicle membrane;0.0208370212341143!GO:0014706;striated muscle development;0.0210007380339825!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0214719521911807!GO:0005924;cell-substrate adherens junction;0.0224444816043564!GO:0051540;metal cluster binding;0.0225084393361434!GO:0051536;iron-sulfur cluster binding;0.0225084393361434!GO:0030055;cell-matrix junction;0.02275865085772!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0228271515743014!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0231126610385097!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0231504761516728!GO:0005916;fascia adherens;0.023161130709797!GO:0050681;androgen receptor binding;0.0234843021844586!GO:0030334;regulation of cell migration;0.0236483548816172!GO:0019888;protein phosphatase regulator activity;0.0237771139991196!GO:0030031;cell projection biogenesis;0.0239544960460705!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0241701401985532!GO:0045047;protein targeting to ER;0.0241701401985532!GO:0005977;glycogen metabolic process;0.0241701401985532!GO:0051056;regulation of small GTPase mediated signal transduction;0.0243304076279513!GO:0048662;negative regulation of smooth muscle cell proliferation;0.0243439486415413!GO:0046983;protein dimerization activity;0.0243439486415413!GO:0006633;fatty acid biosynthetic process;0.0243466675835831!GO:0016740;transferase activity;0.0249074039686387!GO:0005518;collagen binding;0.0267830521047927!GO:0018196;peptidyl-asparagine modification;0.0267830521047927!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0267830521047927!GO:0000159;protein phosphatase type 2A complex;0.0269606929266546!GO:0030118;clathrin coat;0.0269606929266546!GO:0032535;regulation of cellular component size;0.0285500694156487!GO:0006974;response to DNA damage stimulus;0.0289349927338827!GO:0008147;structural constituent of bone;0.0294537644700907!GO:0046578;regulation of Ras protein signal transduction;0.0296075649007071!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0297420902115293!GO:0050839;cell adhesion molecule binding;0.0297420902115293!GO:0006399;tRNA metabolic process;0.0300580293199775!GO:0006818;hydrogen transport;0.0300580293199775!GO:0030172;troponin C binding;0.0301510279526852!GO:0006006;glucose metabolic process;0.0310394486291949!GO:0048738;cardiac muscle development;0.0317417623078671!GO:0015992;proton transport;0.0320166361621913!GO:0004004;ATP-dependent RNA helicase activity;0.0320166361621913!GO:0044433;cytoplasmic vesicle part;0.0323158835497381!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0323759082168205!GO:0035035;histone acetyltransferase binding;0.0324859895711082!GO:0005099;Ras GTPase activator activity;0.0325585748444153!GO:0051098;regulation of binding;0.0326798430304317!GO:0030832;regulation of actin filament length;0.0328688300418222!GO:0004111;creatine kinase activity;0.0337061697349365!GO:0008601;protein phosphatase type 2A regulator activity;0.033852948132431!GO:0007167;enzyme linked receptor protein signaling pathway;0.0344127246448505!GO:0000287;magnesium ion binding;0.0347041923715825!GO:0051101;regulation of DNA binding;0.0347192996507387!GO:0031032;actomyosin structure organization and biogenesis;0.0355035235894485!GO:0019903;protein phosphatase binding;0.0359980542643086!GO:0006650;glycerophospholipid metabolic process;0.0364162177533807!GO:0016529;sarcoplasmic reticulum;0.0371906672327625!GO:0016528;sarcoplasm;0.0371906672327625!GO:0050662;coenzyme binding;0.0373722363917684!GO:0014866;skeletal myofibril assembly;0.0374031448537981!GO:0030100;regulation of endocytosis;0.0381956547102884!GO:0008312;7S RNA binding;0.0382038251888234!GO:0006509;membrane protein ectodomain proteolysis;0.0387579416173508!GO:0033619;membrane protein proteolysis;0.0387579416173508!GO:0045098;type III intermediate filament;0.0388226544861809!GO:0030346;protein phosphatase 2B binding;0.0393458252095506!GO:0007030;Golgi organization and biogenesis;0.0399294008627245!GO:0030865;cortical cytoskeleton organization and biogenesis;0.039938486087094!GO:0032787;monocarboxylic acid metabolic process;0.0400063828185236!GO:0031902;late endosome membrane;0.0405398485392817!GO:0030218;erythrocyte differentiation;0.0414098122129036!GO:0008064;regulation of actin polymerization and/or depolymerization;0.041621085742674!GO:0019752;carboxylic acid metabolic process;0.0431053118592498!GO:0051235;maintenance of localization;0.0437293508866539!GO:0019318;hexose metabolic process;0.0453618918477171!GO:0051393;alpha-actinin binding;0.0455919009019455!GO:0009719;response to endogenous stimulus;0.0461906647288704!GO:0004722;protein serine/threonine phosphatase activity;0.046207874414863!GO:0022415;viral reproductive process;0.0464045336529538!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0465820944987737!GO:0004784;superoxide dismutase activity;0.0465820944987737!GO:0005516;calmodulin binding;0.0471290196746131!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0474515233724567!GO:0051248;negative regulation of protein metabolic process;0.0475719593802057!GO:0019838;growth factor binding;0.0478852166188861!GO:0030032;lamellipodium biogenesis;0.0480002023277649!GO:0008017;microtubule binding;0.0480002023277649!GO:0000059;protein import into nucleus, docking;0.0484556358392728!GO:0030911;TPR domain binding;0.0484958256753611!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0492450490556364!GO:0006376;mRNA splice site selection;0.0492797008430544!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0492797008430544 | |||
|sample_id=10205 | |sample_id=10205 | ||
|sample_note= | |sample_note= | ||
|sample_sex= | |sample_sex=M | ||
|sample_species=Human (Homo sapiens) | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue= | |sample_tissue= | ||
|top_motifs=MEF2{A,B,C,D}:4.92099772692;NR1H4:3.46028608735;XBP1:2.85491203938;MYBL2:2.82001828276;SRF:2.6736139485;AR:2.29159860242;FOXL1:2.21577999337;NFATC1..3:2.20490824078;GCM1,2:2.13715295701;MAFB:2.10516893596;HSF1,2:2.02742515298;ESRRA:1.9992449156;NFE2L1:1.97958263572;SPZ1:1.94158223351;MAZ:1.89930404347;TFAP4:1.86256951287;TGIF1:1.83910790441;TFAP2{A,C}:1.81716499488;NKX2-2,8:1.81435973817;NR5A1,2:1.80461338634;GATA4:1.79565258243;TLX1..3_NFIC{dimer}:1.77098375217;TBX4,5:1.76340236504;IKZF2:1.75904718136;SMAD1..7,9:1.74382400726;TLX2:1.72225043122;RORA:1.72105796356;EP300:1.69986396878;FOXO1,3,4:1.69480579463;PDX1:1.68857431908;HMX1:1.60705327228;HOX{A4,D4}:1.60169483211;PAX6:1.56458597654;HIC1:1.56190499408;TBP:1.55677047694;IKZF1:1.48899316853;GLI1..3:1.36882245256;GATA6:1.35922895592;HAND1,2:1.34255008123;TEAD1:1.33234307721;EGR1..3:1.31901476017;STAT1,3:1.31642404559;PATZ1:1.31219946883;PRDM1:1.30124108826;GFI1B:1.3001123508;TFCP2:1.28933217127;MED-1{core}:1.25505494244;RXRA_VDR{dimer}:1.25350081737;ATF6:1.24038478774;UFEwm:1.22488893646;SOX5:1.21669011526;CDX1,2,4:1.20334167767;POU3F1..4:1.19590588406;MYFfamily:1.19257288909;GTF2I:1.18391730166;RBPJ:1.17689152203;T:1.16628246684;MTF1:1.13601305208;HOX{A6,A7,B6,B7}:1.12975504152;EVI1:1.12878945182;ATF2:1.1216927764;NHLH1,2:1.09221459742;TFAP2B:1.08966317613;PAX5:1.0842817672;CUX2:1.08147833445;JUN:1.04778157235;ZIC1..3:1.01239470553;SP1:0.986652495224;MTE{core}:0.97931155968;NR3C1:0.967924821562;MZF1:0.960383718852;ZFP161:0.919434331198;NFIX:0.90932639998;GTF2A1,2:0.857706239937;RREB1:0.857397922187;ATF4:0.837499756815;FOXP1:0.816827262282;NANOG{mouse}:0.806285004198;KLF4:0.803485236245;EN1,2:0.791475842767;HOXA9_MEIS1:0.79144638928;ESR1:0.789190677812;BREu{core}:0.785268595427;NKX2-1,4:0.780309066526;CREB1:0.779998622271;NR6A1:0.752034674839;NKX3-1:0.717486758191;STAT2,4,6:0.693244500582;IRF7:0.67278366235;PPARG:0.632639796568;XCPE1{core}:0.582628530161;FOXP3:0.575571930492;ZBTB16:0.568556355471;FOX{D1,D2}:0.561879052292;NANOG:0.533798660651;ZNF238:0.524980868396;GZF1:0.521190631511;REST:0.507982518066;NFIL3:0.501282207748;RXR{A,B,G}:0.497358160148;EBF1:0.49053277663;ATF5_CREB3:0.490214019806;NKX3-2:0.479731076564;HOX{A5,B5}:0.442951782464;PITX1..3:0.40893856126;ZNF384:0.398096692357;TOPORS:0.360132316413;CDC5L:0.29494237773;NKX6-1,2:0.290742642357;IRF1,2:0.273021766757;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.266848062621;FOXN1:0.263369874697;BPTF:0.220384447018;HBP1_HMGB_SSRP1_UBTF:0.218726722857;ALX4:0.185105917795;HMGA1,2:0.118100370664;ALX1:0.0950418025006;FOXA2:0.0467676511357;SOX17:0.0370728577936;LMO2:0.0353830959013;ETS1,2:-0.00129523455321;SREBF1,2:-0.0213079952257;PAX1,9:-0.0252643085605;FOX{F1,F2,J1}:-0.0509455532689;ZNF423:-0.0988111789902;SOX{8,9,10}:-0.115989650978;ADNP_IRX_SIX_ZHX:-0.156126372997;PAX2:-0.1741890467;ZBTB6:-0.175044938675;STAT5{A,B}:-0.178519003434;HNF4A_NR2F1,2:-0.193656709175;TP53:-0.217528251149;GFI1:-0.222675362408;ARID5B:-0.226396834938;ZNF148:-0.233004973846;TEF:-0.238167493043;RFX2..5_RFXANK_RFXAP:-0.248792288233;POU6F1:-0.254707566875;FOXQ1:-0.261022307045;SPI1:-0.267650321838;FOSL2:-0.288220183624;HLF:-0.295243764121;PBX1:-0.30304174969;CEBPA,B_DDIT3:-0.304209580205;SPIB:-0.338761051181;SOX2:-0.379893849637;HNF1A:-0.380063091589;RFX1:-0.394716356318;NRF1:-0.422478644741;YY1:-0.461240159869;POU5F1:-0.472394637014;ZNF143:-0.494927421238;SNAI1..3:-0.505180438409;AHR_ARNT_ARNT2:-0.516592194204;POU1F1:-0.522982866864;LEF1_TCF7_TCF7L1,2:-0.523124934848;MYOD1:-0.53622595466;NFKB1_REL_RELA:-0.539458530317;ZEB1:-0.595127100797;ELF1,2,4:-0.6687730813;BACH2:-0.689127599747;VSX1,2:-0.716429947913;RUNX1..3:-0.723247685421;NFE2:-0.759980184808;HES1:-0.769055813508;DBP:-0.802153528842;NFY{A,B,C}:-0.862545083288;FOXD3:-0.877740711825;FOS_FOS{B,L1}_JUN{B,D}:-0.887783111615;DMAP1_NCOR{1,2}_SMARC:-0.88821465635;FOX{I1,J2}:-0.915780651687;E2F1..5:-0.969525896976;TFDP1:-1.01305904215;NFE2L2:-1.02445193335;LHX3,4:-1.06526292183;PRRX1,2:-1.08080333866;ONECUT1,2:-1.12706744386;FOXM1:-1.12993267607;TAL1_TCF{3,4,12}:-1.14437069784;PAX4:-1.22295352057;MYB:-1.22475636636;CRX:-1.35807125717;HIF1A:-1.39829234777;AIRE:-1.41395552802;PAX8:-1.41650567817;PAX3,7:-1.42631850007;bHLH_family:-1.46851597072;OCT4_SOX2{dimer}:-1.49113974891;NKX2-3_NKX2-5:-1.60807136298;ELK1,4_GABP{A,B1}:-1.68617002573;POU2F1..3:-1.76442042505;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-2.07528783823 | |top_motifs=MEF2{A,B,C,D}:4.92099772692;NR1H4:3.46028608735;XBP1:2.85491203938;MYBL2:2.82001828276;SRF:2.6736139485;AR:2.29159860242;FOXL1:2.21577999337;NFATC1..3:2.20490824078;GCM1,2:2.13715295701;MAFB:2.10516893596;HSF1,2:2.02742515298;ESRRA:1.9992449156;NFE2L1:1.97958263572;SPZ1:1.94158223351;MAZ:1.89930404347;TFAP4:1.86256951287;TGIF1:1.83910790441;TFAP2{A,C}:1.81716499488;NKX2-2,8:1.81435973817;NR5A1,2:1.80461338634;GATA4:1.79565258243;TLX1..3_NFIC{dimer}:1.77098375217;TBX4,5:1.76340236504;IKZF2:1.75904718136;SMAD1..7,9:1.74382400726;TLX2:1.72225043122;RORA:1.72105796356;EP300:1.69986396878;FOXO1,3,4:1.69480579463;PDX1:1.68857431908;HMX1:1.60705327228;HOX{A4,D4}:1.60169483211;PAX6:1.56458597654;HIC1:1.56190499408;TBP:1.55677047694;IKZF1:1.48899316853;GLI1..3:1.36882245256;GATA6:1.35922895592;HAND1,2:1.34255008123;TEAD1:1.33234307721;EGR1..3:1.31901476017;STAT1,3:1.31642404559;PATZ1:1.31219946883;PRDM1:1.30124108826;GFI1B:1.3001123508;TFCP2:1.28933217127;MED-1{core}:1.25505494244;RXRA_VDR{dimer}:1.25350081737;ATF6:1.24038478774;UFEwm:1.22488893646;SOX5:1.21669011526;CDX1,2,4:1.20334167767;POU3F1..4:1.19590588406;MYFfamily:1.19257288909;GTF2I:1.18391730166;RBPJ:1.17689152203;T:1.16628246684;MTF1:1.13601305208;HOX{A6,A7,B6,B7}:1.12975504152;EVI1:1.12878945182;ATF2:1.1216927764;NHLH1,2:1.09221459742;TFAP2B:1.08966317613;PAX5:1.0842817672;CUX2:1.08147833445;JUN:1.04778157235;ZIC1..3:1.01239470553;SP1:0.986652495224;MTE{core}:0.97931155968;NR3C1:0.967924821562;MZF1:0.960383718852;ZFP161:0.919434331198;NFIX:0.90932639998;GTF2A1,2:0.857706239937;RREB1:0.857397922187;ATF4:0.837499756815;FOXP1:0.816827262282;NANOG{mouse}:0.806285004198;KLF4:0.803485236245;EN1,2:0.791475842767;HOXA9_MEIS1:0.79144638928;ESR1:0.789190677812;BREu{core}:0.785268595427;NKX2-1,4:0.780309066526;CREB1:0.779998622271;NR6A1:0.752034674839;NKX3-1:0.717486758191;STAT2,4,6:0.693244500582;IRF7:0.67278366235;PPARG:0.632639796568;XCPE1{core}:0.582628530161;FOXP3:0.575571930492;ZBTB16:0.568556355471;FOX{D1,D2}:0.561879052292;NANOG:0.533798660651;ZNF238:0.524980868396;GZF1:0.521190631511;REST:0.507982518066;NFIL3:0.501282207748;RXR{A,B,G}:0.497358160148;EBF1:0.49053277663;ATF5_CREB3:0.490214019806;NKX3-2:0.479731076564;HOX{A5,B5}:0.442951782464;PITX1..3:0.40893856126;ZNF384:0.398096692357;TOPORS:0.360132316413;CDC5L:0.29494237773;NKX6-1,2:0.290742642357;IRF1,2:0.273021766757;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.266848062621;FOXN1:0.263369874697;BPTF:0.220384447018;HBP1_HMGB_SSRP1_UBTF:0.218726722857;ALX4:0.185105917795;HMGA1,2:0.118100370664;ALX1:0.0950418025006;FOXA2:0.0467676511357;SOX17:0.0370728577936;LMO2:0.0353830959013;ETS1,2:-0.00129523455321;SREBF1,2:-0.0213079952257;PAX1,9:-0.0252643085605;FOX{F1,F2,J1}:-0.0509455532689;ZNF423:-0.0988111789902;SOX{8,9,10}:-0.115989650978;ADNP_IRX_SIX_ZHX:-0.156126372997;PAX2:-0.1741890467;ZBTB6:-0.175044938675;STAT5{A,B}:-0.178519003434;HNF4A_NR2F1,2:-0.193656709175;TP53:-0.217528251149;GFI1:-0.222675362408;ARID5B:-0.226396834938;ZNF148:-0.233004973846;TEF:-0.238167493043;RFX2..5_RFXANK_RFXAP:-0.248792288233;POU6F1:-0.254707566875;FOXQ1:-0.261022307045;SPI1:-0.267650321838;FOSL2:-0.288220183624;HLF:-0.295243764121;PBX1:-0.30304174969;CEBPA,B_DDIT3:-0.304209580205;SPIB:-0.338761051181;SOX2:-0.379893849637;HNF1A:-0.380063091589;RFX1:-0.394716356318;NRF1:-0.422478644741;YY1:-0.461240159869;POU5F1:-0.472394637014;ZNF143:-0.494927421238;SNAI1..3:-0.505180438409;AHR_ARNT_ARNT2:-0.516592194204;POU1F1:-0.522982866864;LEF1_TCF7_TCF7L1,2:-0.523124934848;MYOD1:-0.53622595466;NFKB1_REL_RELA:-0.539458530317;ZEB1:-0.595127100797;ELF1,2,4:-0.6687730813;BACH2:-0.689127599747;VSX1,2:-0.716429947913;RUNX1..3:-0.723247685421;NFE2:-0.759980184808;HES1:-0.769055813508;DBP:-0.802153528842;NFY{A,B,C}:-0.862545083288;FOXD3:-0.877740711825;FOS_FOS{B,L1}_JUN{B,D}:-0.887783111615;DMAP1_NCOR{1,2}_SMARC:-0.88821465635;FOX{I1,J2}:-0.915780651687;E2F1..5:-0.969525896976;TFDP1:-1.01305904215;NFE2L2:-1.02445193335;LHX3,4:-1.06526292183;PRRX1,2:-1.08080333866;ONECUT1,2:-1.12706744386;FOXM1:-1.12993267607;TAL1_TCF{3,4,12}:-1.14437069784;PAX4:-1.22295352057;MYB:-1.22475636636;CRX:-1.35807125717;HIF1A:-1.39829234777;AIRE:-1.41395552802;PAX8:-1.41650567817;PAX3,7:-1.42631850007;bHLH_family:-1.46851597072;OCT4_SOX2{dimer}:-1.49113974891;NKX2-3_NKX2-5:-1.60807136298;ELK1,4_GABP{A,B1}:-1.68617002573;POU2F1..3:-1.76442042505;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-2.07528783823 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10205-103F7;search_select_hide=table117:FF:10205-103F7 | |||
}} | }} | ||
Latest revision as of 13:56, 3 June 2020
| Name: | heart - mitral valve, adult |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12855 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12855
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12855
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0772 |
| 10 | 10 | 0.117 |
| 100 | 100 | 0.495 |
| 101 | 101 | 0.629 |
| 102 | 102 | 0.266 |
| 103 | 103 | 0.137 |
| 104 | 104 | 0.298 |
| 105 | 105 | 0.573 |
| 106 | 106 | 0.726 |
| 107 | 107 | 0.757 |
| 108 | 108 | 0.364 |
| 109 | 109 | 0.00472 |
| 11 | 11 | 0.0553 |
| 110 | 110 | 0.0539 |
| 111 | 111 | 0.0137 |
| 112 | 112 | 0.822 |
| 113 | 113 | 0.724 |
| 114 | 114 | 0.214 |
| 115 | 115 | 0.305 |
| 116 | 116 | 0.75 |
| 117 | 117 | 0.00873 |
| 118 | 118 | 0.0352 |
| 119 | 119 | 0.872 |
| 12 | 12 | 0.818 |
| 120 | 120 | 0.0573 |
| 121 | 121 | 0.989 |
| 122 | 122 | 0.0608 |
| 123 | 123 | 0.364 |
| 124 | 124 | 0.202 |
| 125 | 125 | 0.598 |
| 126 | 126 | 0.236 |
| 127 | 127 | 0.274 |
| 128 | 128 | 0.561 |
| 129 | 129 | 0.0537 |
| 13 | 13 | 0.054 |
| 130 | 130 | 0.863 |
| 131 | 131 | 0.069 |
| 132 | 132 | 0.151 |
| 133 | 133 | 0.0421 |
| 134 | 134 | 0.381 |
| 135 | 135 | 0.257 |
| 136 | 136 | 0.105 |
| 137 | 137 | 0.778 |
| 138 | 138 | 0.913 |
| 139 | 139 | 0.693 |
| 14 | 14 | 0.884 |
| 140 | 140 | 0.849 |
| 141 | 141 | 0.836 |
| 142 | 142 | 0.537 |
| 143 | 143 | 0.00764 |
| 144 | 144 | 0.436 |
| 145 | 145 | 0.34 |
| 146 | 146 | 0.641 |
| 147 | 147 | 0.0762 |
| 148 | 148 | 0.433 |
| 149 | 149 | 0.386 |
| 15 | 15 | 0.16 |
| 150 | 150 | 0.447 |
| 151 | 151 | 0.772 |
| 152 | 152 | 0.506 |
| 153 | 153 | 0.535 |
| 154 | 154 | 0.662 |
| 155 | 155 | 0.646 |
| 156 | 156 | 0.916 |
| 157 | 157 | 0.8 |
| 158 | 158 | 0.36 |
| 159 | 159 | 0.846 |
| 16 | 16 | 0.276 |
| 160 | 160 | 0.258 |
| 161 | 161 | 0.263 |
| 162 | 162 | 0.703 |
| 163 | 163 | 0.404 |
| 164 | 164 | 0.0524 |
| 165 | 165 | 0.474 |
| 166 | 166 | 0.0271 |
| 167 | 167 | 0.0644 |
| 168 | 168 | 0.794 |
| 169 | 169 | 0.0646 |
| 17 | 17 | 0.302 |
| 18 | 18 | 0.132 |
| 19 | 19 | 0.353 |
| 2 | 2 | 0.354 |
| 20 | 20 | 0.128 |
| 21 | 21 | 0.344 |
| 22 | 22 | 0.757 |
| 23 | 23 | 0.352 |
| 24 | 24 | 0.105 |
| 25 | 25 | 0.394 |
| 26 | 26 | 0.0571 |
| 27 | 27 | 0.327 |
| 28 | 28 | 0.526 |
| 29 | 29 | 0.00224 |
| 3 | 3 | 0.109 |
| 30 | 30 | 0.28 |
| 31 | 31 | 0.732 |
| 32 | 32 | 0.437 |
| 33 | 33 | 0.0924 |
| 34 | 34 | 0.446 |
| 35 | 35 | 0.605 |
| 36 | 36 | 0.0486 |
| 37 | 37 | 0.135 |
| 38 | 38 | 0.468 |
| 39 | 39 | 0.247 |
| 4 | 4 | 0.215 |
| 40 | 40 | 0.00633 |
| 41 | 41 | 0.245 |
| 42 | 42 | 0.146 |
| 43 | 43 | 0.144 |
| 44 | 44 | 0.999 |
| 45 | 45 | 0.629 |
| 46 | 46 | 0.183 |
| 47 | 47 | 0.0505 |
| 48 | 48 | 0.0403 |
| 49 | 49 | 0.157 |
| 5 | 5 | 0.573 |
| 50 | 50 | 0.877 |
| 51 | 51 | 0.472 |
| 52 | 52 | 0.347 |
| 53 | 53 | 0.709 |
| 54 | 54 | 0.76 |
| 55 | 55 | 0.283 |
| 56 | 56 | 0.393 |
| 57 | 57 | 0.161 |
| 58 | 58 | 0.396 |
| 59 | 59 | 0.543 |
| 6 | 6 | 0.709 |
| 60 | 60 | 0.81 |
| 61 | 61 | 0.0741 |
| 62 | 62 | 0.472 |
| 63 | 63 | 0.554 |
| 64 | 64 | 0.0681 |
| 65 | 65 | 0.722 |
| 66 | 66 | 0.00244 |
| 67 | 67 | 0.571 |
| 68 | 68 | 0.112 |
| 69 | 69 | 0.499 |
| 7 | 7 | 0.16 |
| 70 | 70 | 0.113 |
| 71 | 71 | 0.0151 |
| 72 | 72 | 0.367 |
| 73 | 73 | 0.117 |
| 74 | 74 | 0.113 |
| 75 | 75 | 0.00901 |
| 76 | 76 | 0.346 |
| 77 | 77 | 0.767 |
| 78 | 78 | 0.366 |
| 79 | 79 | 0.224 |
| 8 | 8 | 0.161 |
| 80 | 80 | 0.838 |
| 81 | 81 | 0.439 |
| 82 | 82 | 0.834 |
| 83 | 83 | 0.467 |
| 84 | 84 | 0.778 |
| 85 | 85 | 0.23 |
| 86 | 86 | 0.947 |
| 87 | 87 | 0.00166 |
| 88 | 88 | 0.878 |
| 89 | 89 | 0.859 |
| 9 | 9 | 0.847 |
| 90 | 90 | 0.216 |
| 91 | 91 | 0.175 |
| 92 | 92 | 0.911 |
| 93 | 93 | 0.502 |
| 94 | 94 | 0.0377 |
| 95 | 95 | 0.00197 |
| 96 | 96 | 0.422 |
| 97 | 97 | 0.612 |
| 98 | 98 | 0.428 |
| 99 | 99 | 0.944 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12855
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010205 human heart, mitral valve - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0007100 (primary circulatory organ)
0000948 (heart)
0002135 (mitral valve)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0010313 (neural crest-derived structure)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0003978 (valve)
0000946 (cardial valve)
0002133 (atrioventricular valve)
0010317 (germ layer / neural crest derived structure)
0004535 (cardiovascular system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010205 (human heart, mitral valve - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0006603 (presumptive mesoderm)
UBERON:0003104 (mesenchyme)
UBERON:0005062 (neural fold)
UBERON:0007284 (presumptive neural plate)
UBERON:0010316 (germ layer / neural crest)
