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{{f5samples
{{f5samples
|id=FF:10555-107I6
|DRA_sample_Accession=CAGE@SAMD00005234
|name=neuroblastoma cell line:NH-12, biol_rep1
|accession_numbers=CAGE;DRX007963;DRR008835;DRZ000260;DRZ001645;DRZ011610;DRZ012995
|sample_id=10555
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000013,UBERON:0004121,UBERON:0011216,UBERON:0002410,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0000010,UBERON:0001016
|rna_tube_id=107I6
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000333,CL:0000003,CL:0000548,CL:0002321,CL:0000219,CL:0000255
|rna_box=107
|ancestors_in_disease_facet=DOID:4,DOID:162,DOID:14566,DOID:0050687,DOID:171,DOID:3095,DOID:2994,DOID:169
|rna_position=I6
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100932
|sample_cell_lot=
|comment=
|sample_cell_catalog=RCB2108
|created_by=
|sample_company=RIKEN Bioresource centre
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
|expression_enrichment_score=chr2:16080659..16080685,+!p1@MYCN!3.44!2780.04!MYCN;;chr11:71955210..71955227,-!p1@PHOX2A!3.00!988.57!PHOX2A;;chr4:174451370..174451387,-!p1@HAND2!2.85!705.06!HAND2;;chr2:16081912..16081931,+!p2@MYCN!2.53!340.08!MYCN;;chr2:16082155..16082169,+!p3@MYCN!2.34!218.42!MYCN;;chr3:128212033..128212051,-!p1@GATA2!2.28!187.84!GATA2;;chr6:50786591..50786614,+!p1@TFAP2B!2.26!182.05!TFAP2B;;chr5:153857778..153857794,-!p1@HAND1!2.19!155.08!HAND1;;chr2:16080635..16080650,+!p4@MYCN!2.18!149.07!MYCN;;chr5:50679228..50679288,+!p1@ISL1!2.14!135.64!ISL1;;chr4:41750731..41750748,-!p1@PHOX2B!2.04!109.65!PHOX2B;;chr2:74741569..74741620,+!p1@TLX2!1.99!97.20!TLX2;;chr4:174451350..174451363,-!p3@HAND2!1.97!93.37!HAND2;;chr7:19157248..19157268,-!p1@TWIST1!1.95!235.35!TWIST1;;chr14:36003363..36003378,+!p1@INSM2!1.95!88.35!INSM2;;chr10:8096631..8096660,+!p1@GATA3!1.90!95.01!GATA3;;chr2:16082395..16082415,+!p6@MYCN!1.85!70.33!MYCN;;chr2:16080823..16080836,+!p5@MYCN!1.84!67.93!MYCN;;chr13:100634031..100634045,+!p1@ZIC2!1.79!60.72!ZIC2;;chr2:5832508..5832524,+!p1@SOX11!1.77!57.44!SOX11;;chr13:100623375..100623425,-!p1@ZIC5!1.68!46.63!ZIC5;;chr6:50786571..50786590,+!p2@TFAP2B!1.65!43.90!TFAP2B;;chr2:16082094..16082106,+!p7@MYCN!1.65!43.47!MYCN;;chr4:174450089..174450153,-!p2@HAND2!1.63!41.94!HAND2;;chr2:16082418..16082429,+!p8@MYCN!1.63!41.28!MYCN;;chr8:40755333..40755352,-!p1@ZMAT4!1.61!40.19!ZMAT4;;chr1:214161272..214161322,+!p1@PROX1!1.60!53.84!PROX1;;chr6:50786547..50786564,+!p3@TFAP2B!1.57!35.82!TFAP2B;;chr6:50789717..50789729,+!p4@TFAP2B!1.56!35.49!TFAP2B;;chr9:132427883..132427951,+!p2@PRRX2!1.54!33.96!PRRX2;;chr4:41750839..41750850,-!p2@PHOX2B!1.53!33.09!PHOX2B;;chr15:57511609..57511651,+!p2@TCF12!1.51!51.77!TCF12;;chr2:2334997..2335053,-!p1@MYT1L!1.48!29.27!MYT1L;;chr13:100634004..100634025,+!p2@ZIC2!1.48!28.94!ZIC2;;chr11:8102749..8102769,+!p2@TUB!1.47!54.60!TUB;;chr2:25475120..25475176,-!p2@DNMT3A!1.47!38.00!DNMT3A;;chr18:52989031..52989079,-!p2@TCF4!1.46!63.89!TCF4;;chr10:8096772..8096787,+!p2@GATA3!1.45!32.22!GATA3;;chr7:35293685..35293718,-!p1@TBX20!1.43!25.99!TBX20;;chr3:128206762..128206781,-!p2@GATA2!1.42!151.58!GATA2;;chr5:153857800..153857812,-!p2@HAND1!1.42!25.34!HAND1;;chr2:74741642..74741658,+!p2@TLX2!1.41!24.46!TLX2;;chr17:46622440..46622477,-!p5@HOXB2!1.38!25.66!HOXB2;;chr18:52969674..52969685,-!p24@TCF4!1.38!23.04!TCF4;;chr21:47063625..47063658,+!p1@PCBP3!1.37!95.01!PCBP3;;chr4:41750922..41750939,-!p4@PHOX2B!1.36!22.17!PHOX2B;;chr19:9609272..9609297,-!p1@ZNF560!1.36!21.95!ZNF560;;chr13:37494365..37494381,-!p1@SMAD9!1.35!36.69!SMAD9;;chrX:84499081..84499115,+!p2@ZNF711!1.35!31.12!ZNF711;;chr16:67197654..67197716,+!p3@HSF4!1.35!21.62!HSF4;;chr2:2328725..2328739,-!p5@MYT1L!1.34!21.08!MYT1L;;chr17:59477233..59477263,+!p1@TBX2!1.32!59.85!TBX2;;chr11:63684602..63684664,-!p1@RCOR2!1.30!37.02!RCOR2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.29!18.46!PEG3;;chr1:151032922..151032951,+!p2@MLLT11!1.28!29.81!MLLT11;;chr17:53342311..53342400,+!p1@HLF!1.28!20.75!HLF;;chr17:41623692..41623715,-!p1@ETV4!1.25!70.11!ETV4;;chr11:8102846..8102892,+!p1@TUB!1.24!22.93!TUB;;chr9:14314131..14314147,-!p2@NFIB!1.23!87.80!NFIB;;chr2:60780607..60780624,-!p2@BCL11A!1.23!48.38!BCL11A;;chr10:70320074..70320106,+!p1@TET1!1.23!32.11!TET1;;chr9:77112244..77112262,+!p1@RORB!1.23!17.69!RORB;;chr5:170736243..170736279,+!p1@TLX3!1.23!16.16!TLX3;;chr12:103351444..103351461,+!p1@ASCL1!1.22!15.62!ASCL1;;chr17:59477197..59477212,+!p2@TBX2!1.19!24.90!TBX2;;chr4:81118647..81118666,+!p1@PRDM8!1.19!19.00!PRDM8;;chr2:219849897..219849928,-!p2@FEV!1.19!14.52!FEV;;chr10:8095593..8095625,+!p3@GATA3!1.18!16.60!GATA3;;chr4:53206..53260,+!p1@ZNF595,p1@ZNF718!1.17!131.16!ZNF595;;chr18:56532100..56532130,+!p1@ZNF532!1.16!24.90!ZNF532;;chr18:55102628..55102646,+!p2@ONECUT2!1.16!13.43!ONECUT2;;chr2:219849805..219849819,-!p3@FEV!1.16!13.43!FEV;;chr12:54447637..54447659,+!p4@HOXC4!1.16!13.43!HOXC4;;chr4:41750793..41750804,-!p5@PHOX2B!1.15!13.11!PHOX2B;;chr5:150284532..150284549,-!p1@ZNF300!1.13!26.10!ZNF300;;chr4:299227..299272,-!p1@ZNF732!1.13!12.45!ZNF732;;chr18:56531584..56531646,+!p4@ZNF532!1.12!16.27!ZNF532;;chr12:54447599..54447630,+!p3@HOXC4!1.12!14.96!HOXC4;;chr2:45168997..45169020,+!p4@SIX3!1.12!12.12!SIX3;;chr2:166326200..166326216,+!p1@CSRNP3!1.11!17.26!CSRNP3;;chr2:176994408..176994492,+!p1@HOXD8!1.11!12.01!HOXD8;;chr10:50604121..50604142,-!p1@DRGX!1.11!11.79!DRGX;;chr1:151032860..151032918,+!p1@MLLT11!1.10!137.71!MLLT11;;chr3:40547564..40547616,+!p1@ZNF620!1.10!16.49!ZNF620;;chr12:54393880..54393962,+!p1@HOXC9!1.09!11.36!HOXC9;;chrY:21906594..21906622,-!p1@KDM5D!1.09!11.36!KDM5D;;chr18:55102598..55102623,+!p1@ONECUT2!1.09!11.36!ONECUT2;;chr12:115121962..115121987,-!p1@TBX3!1.08!92.28!TBX3;;chr19:12163769..12163798,-!p1@ZNF878!1.08!14.42!ZNF878;;chr10:131762504..131762555,-!p1@EBF3!1.08!11.03!EBF3;;chr6:50786631..50786635,+!p11@TFAP2B!1.08!11.03!TFAP2B;;chr19:22817119..22817145,+!p1@ZNF492!1.07!18.13!ZNF492;;chr17:46622229..46622257,-!p6@HOXB2!1.07!12.67!HOXB2;;chr7:19185475..19185487,-!p1@FERD3L!1.07!10.70!FERD3L;;chr12:85673977..85674015,+!p1@ALX1!1.06!10.59!ALX1;;chr13:100634130..100634143,+!p3@ZIC2!1.06!10.48!ZIC2;;chrX:84498989..84499003,+!p1@ZNF711!1.05!13.98!ZNF711;;chr12:115122318..115122331,-!p2@TBX3!1.05!10.27!TBX3;;chr11:8102819..8102845,+!p3@TUB!1.04!12.56!TUB;;chr16:73092898..73092931,-!p1@ZFHX3!1.03!37.79!ZFHX3;;chr19:38042240..38042309,+!p2@ZNF540!1.03!15.07!ZNF540;;chr2:16082384..16082391,+!p9@MYCN!1.03!9.61!MYCN;;chr2:5832493..5832507,+!p2@SOX11!1.02!9.50!SOX11;;chr2:60780753..60780800,-!p1@BCL11A!1.01!46.85!BCL11A;;chr8:60031682..60031710,-!p2@TOX!1.01!15.07!TOX;;chr9:132427972..132428056,+!p1@PRRX2!1.01!12.23!PRRX2;;chr4:41750860..41750867,-!p8@PHOX2B!1.01!9.17!PHOX2B;;chr7:19157043..19157088,-!p2@TWIST1!1.00!23.26!TWIST1;;chr10:8100691..8100732,+!p5@GATA3!1.00!8.96!GATA3;;chr19:20188776..20188826,+!p1@ZNF90!0.99!24.14!ZNF90;;chr3:42947600..42947680,+!p1@ZNF662!0.99!12.89!ZNF662;;chr6:20402102..20402152,+!p1@E2F3!0.98!35.60!E2F3;;chr13:72441315..72441454,-!p1@DACH1!0.98!17.26!DACH1;;chr8:28748099..28748141,+!p2@HMBOX1!0.97!26.76!HMBOX1;;chr13:100638100..100638115,+!p4@ZIC2!0.97!8.41!ZIC2;;chr11:66188503..66188511,+!p1@NPAS4!0.97!8.30!NPAS4;;chr7:63505799..63505904,+!p1@ZNF727!0.96!8.08!ZNF727;;chr9:14314106..14314119,-!p5@NFIB!0.95!14.52!NFIB;;chr20:62795799..62795819,+!p1@MYT1!0.95!7.97!MYT1;;chr2:74740569..74740580,+!p4@TLX2!0.95!7.86!TLX2;;chr5:170736216..170736238,+!p2@TLX3!0.95!7.86!TLX3;;chr9:14313893..14313908,-!p7@NFIB!0.94!11.36!NFIB;;chr8:30890810..30890880,-!p1@PURG!0.94!7.75!PURG;;chr12:115121770..115121781,-!p4@TBX3!0.94!7.75!TBX3;;chr2:2328741..2328756,-!p8@MYT1L!0.94!7.75!MYT1L;;chr4:41750895..41750904,-!p6@PHOX2B!0.94!7.75!PHOX2B;;chr2:74726710..74726736,-!p3@LBX2!0.94!7.64!LBX2;;chr7:19185493..19185503,-!p2@FERD3L!0.94!7.64!FERD3L;;chr20:32274179..32274213,-!p1@E2F1!0.93!51.66!E2F1;;chr18:53257027..53257052,-!p3@TCF4!0.93!31.02!TCF4;;chr5:153857819..153857824,-!p3@HAND1!0.93!7.54!HAND1;;chr1:153940354..153940395,+!p1@CREB3L4!0.92!30.47!CREB3L4;;chr1:247171347..247171366,-!p2@ZNF695!0.92!13.65!ZNF695;;chr3:44626446..44626477,+!p1@ZNF660!0.92!13.54!ZNF660;;chrX:131624056..131624069,-!p2@MBNL3!0.92!10.05!MBNL3;;chr2:25475094..25475112,-!p3@DNMT3A!0.91!7.21!DNMT3A;;chr19:37096139..37096170,-!p2@ZNF529!0.90!20.20!ZNF529;;chr3:126076264..126076305,-!p2@KLF15!0.90!9.83!KLF15;;chr19:9609247..9609262,-!p2@ZNF560!0.90!6.99!ZNF560;;chr17:41277372..41277418,-!p1@BRCA1!0.89!25.77!BRCA1;;chr9:128509663..128509715,+!p1@PBX3!0.89!24.03!PBX3;;chr19:38720294..38720348,-!p1@DPF1!0.89!8.63!DPF1;;chr19:57183114..57183145,-!p1@ZNF835!0.89!7.64!ZNF835;;chr19:24097675..24097699,+!p1@ZNF726!0.88!23.15!ZNF726;;chr19:57901326..57901385,+!p2@ZNF548!0.88!16.49!ZNF548;;chr2:71127699..71127744,+!p1@VAX2!0.88!13.87!VAX2;;chr19:9473676..9473712,+!p2@ZNF177,p2@ZNF559-ZNF177!0.88!6.66!ZNF177;;chr3:126076242..126076257,-!p1@KLF15!0.87!8.19!KLF15;;chr2:2335109..2335134,-!p2@MYT1L!0.87!6.33!MYT1L;;chr7:28448965..28448994,+!p2@CREB5!0.86!23.15!CREB5;;chr10:44070016..44070069,-!p1@ZNF239!0.86!19.66!ZNF239;;chr8:80679993..80680011,-!p1@HEY1!0.86!9.17!HEY1;;chr4:8873716..8873738,-!p2@HMX1!0.86!6.22!HMX1;;chr19:53758058..53758088,-!p2@ZNF677!0.85!21.08!ZNF677;;chr9:114287433..114287513,+!p1@ZNF483!0.85!16.38!ZNF483;;chr19:56988677..56988729,-!p1@ZNF667!0.85!11.03!ZNF667;;chr8:60031762..60031803,-!p3@TOX!0.85!9.17!TOX;;chr6:108977520..108977534,+!p7@FOXO3!0.85!6.12!FOXO3;;chr1:43148625..43148710,+!p3@YBX1!0.84!11.03!YBX1;;chr5:178368186..178368238,+!p1@ZNF454!0.84!10.92!ZNF454;;chr19:44455368..44455396,+!p1@ZNF221!0.83!20.75!ZNF221;;chr12:133706820..133706881,-!p1@ZNF891!0.83!12.56!ZNF891;;chr6:31869828..31869880,-!p1@ZBTB12!0.83!11.25!ZBTB12;;chr19:11750566..11750627,+!p1@ZNF833P!0.83!7.97!ZNF833P;;chr19:38183138..38183157,-!p2@ZNF781!0.83!5.79!ZNF781;;chr1:214161619..214161629,+!p5@PROX1!0.83!5.79!PROX1;;chr2:45168959..45168990,+!p6@SIX3!0.83!5.79!SIX3;;chr19:9695169..9695188,-!p1@ZNF121!0.82!105.82!ZNF121;;chr5:176738887..176738934,-!p1@MXD3!0.82!40.63!MXD3;;chr2:60778035..60778060,-!p4@BCL11A!0.82!6.77!BCL11A;;chr3:52002412..52002433,-!p7@PCBP4!0.82!5.68!PCBP4;;chr13:37494275..37494304,-!p2@SMAD9!0.82!5.68!SMAD9;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!0.82!5.57!HOXC5;;chr2:219850049..219850060,-!p8@FEV!0.82!5.57!FEV;;chr2:219850277..219850288,-!p9@FEV!0.82!5.57!FEV;;chr9:77112225..77112238,+!p2@RORB!0.81!5.46!RORB;;chr15:57511589..57511608,+!p4@TCF12!0.81!5.46!TCF12;;chr19:20959098..20959117,+!p1@ZNF66P!0.80!23.70!ZNF66P;;chr19:22034809..22034878,-!p2@ZNF43!0.80!20.20!ZNF43;;chr2:66662281..66662308,+!p1@MEIS1!0.80!19.77!MEIS1;;chr5:92918894..92918912,+!p2@NR2F1!0.80!18.78!NR2F1;;chr6:50786057..50786069,+!p9@TFAP2B!0.80!5.35!TFAP2B;;chr13:37494248..37494260,-!p3@SMAD9!0.80!5.35!SMAD9;;chr3:141105235..141105307,+!p7@ZBTB38!0.80!5.35!ZBTB38;;chr16:67197334..67197362,+!p8@HSF4!0.80!5.24!HSF4;;chr10:111967345..111967422,+!p1@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|sample_tissue=brain
|sample_donor(cell lot)=
|sample_sex=unknown
|sample_age=
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|rna_rin=
|rna_od260/230=2.16000
|rna_od260/280=2.11000
|sample_cell_type=neuroblast
|sample_cell_line=NH-12
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_experimental_condition=
|sample_disease=neuroblastoma
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=64.46405
|rna_concentration=1.84183
|sample_note=
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|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000133,CL:0000144,CL:0000219,CL:0000220,CL:0000221,CL:0000255,CL:0000333,CL:0000548,CL:0002321
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|ancestors_in_disease_facet=DOID:0050687,DOID:14566,DOID:162,DOID:169,DOID:171,DOID:2994,DOID:3095,DOID:4
|sample_description=
 
|fonse_cell_line=FF:0100932
|fonse_cell_line=FF:0100932
|fonse_cell_line_closure=FF:0100932
|fonse_cell_line_closure=FF:0100932
Line 67: Line 40:
|fonse_treatment=
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|fonse_treatment_closure=
|fonse_treatment_closure=
|top_motifs=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aNH-12.CNhs11811.10555-107I6.hg19.ctss.bed.gz
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|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aNH-12.CNhs11811.10555-107I6.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/neuroblastoma%2520cell%2520line%253aNH-12.CNhs11811.10555-107I6.hg38.nobarcode.ctss.bed.gz
|id=FF:10555-107I6
|is_a=EFO:0002091;;FF:0000210;;FF:0100932
|is_obsolete=
|library_id=CNhs11811
|library_id_phase_based=2:CNhs11811
|microRNAs=
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|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10555
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10555
|name=neuroblastoma cell line:NH-12
|namespace=FANTOM5
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|rna_box=107
|rna_catalog_number=
|rna_concentration=1.84183
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.16
|rna_od260/280=2.11
|rna_position=I6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=107I6
|rna_weight_ug=64.46405
|sample_age=
|sample_category=cell lines
|sample_cell_catalog=RCB2108
|sample_cell_line=NH-12
|sample_cell_lot=
|sample_cell_type=neuroblast
|sample_collaboration=Yukio Nakamura (RIKEN BRC)
|sample_company=RIKEN Bioresource centre
|sample_description=
|sample_dev_stage=
|sample_disease=neuroblastoma
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.91577066284694e-294!GO:0043231;intracellular membrane-bound organelle;1.30012743753678e-265!GO:0043227;membrane-bound organelle;2.7213893757283e-265!GO:0043226;organelle;2.18886850933036e-264!GO:0043229;intracellular organelle;6.09366679882458e-264!GO:0005634;nucleus;9.8888545331825e-161!GO:0044422;organelle part;1.13359606727945e-152!GO:0044446;intracellular organelle part;1.0750679745372e-151!GO:0005737;cytoplasm;2.08967299280798e-136!GO:0044237;cellular metabolic process;9.53900294643722e-117!GO:0044238;primary metabolic process;1.06819421319641e-115!GO:0043170;macromolecule metabolic process;2.0069598498937e-114!GO:0032991;macromolecular complex;1.85783383510882e-111!GO:0044428;nuclear part;3.83119740377171e-99!GO:0030529;ribonucleoprotein complex;2.96864420023052e-98!GO:0003723;RNA binding;1.89994254312267e-97!GO:0044444;cytoplasmic part;8.03026383890327e-97!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.21216189678782e-94!GO:0043283;biopolymer metabolic process;1.48275301764047e-91!GO:0010467;gene expression;1.97843250916472e-89!GO:0043233;organelle lumen;1.51202651388129e-88!GO:0031974;membrane-enclosed lumen;1.51202651388129e-88!GO:0003676;nucleic acid binding;6.59531897277989e-78!GO:0006396;RNA processing;5.83836430380634e-67!GO:0005739;mitochondrion;2.35065821424748e-60!GO:0031981;nuclear lumen;8.76593977426619e-60!GO:0016070;RNA metabolic process;5.10845120297716e-56!GO:0005840;ribosome;3.18307657032826e-55!GO:0043234;protein complex;4.13599935304086e-55!GO:0005515;protein binding;1.71951054446245e-54!GO:0016043;cellular component organization and biogenesis;7.93476062520511e-53!GO:0006259;DNA metabolic process;1.69695682554435e-50!GO:0016071;mRNA metabolic process;1.4530766625193e-49!GO:0006412;translation;1.67207975767291e-48!GO:0003735;structural constituent of ribosome;1.99777747058095e-47!GO:0006996;organelle organization and biogenesis;2.90959775953586e-45!GO:0008380;RNA splicing;3.05869554038213e-45!GO:0006397;mRNA processing;9.48723657484243e-44!GO:0033279;ribosomal subunit;1.81511735691798e-42!GO:0043228;non-membrane-bound organelle;2.40192872455926e-42!GO:0043232;intracellular non-membrane-bound organelle;2.40192872455926e-42!GO:0044429;mitochondrial part;1.23151190475262e-41!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.57972885378815e-39!GO:0031975;envelope;1.66835198126046e-38!GO:0031967;organelle envelope;2.78596048939578e-38!GO:0031090;organelle membrane;7.04052464849654e-36!GO:0044249;cellular biosynthetic process;1.12438709998413e-35!GO:0015031;protein transport;1.20240858371427e-35!GO:0019538;protein metabolic process;2.86451537054266e-35!GO:0033036;macromolecule localization;4.06819151560191e-35!GO:0005654;nucleoplasm;8.309940690213e-35!GO:0065003;macromolecular complex assembly;1.51760779051583e-34!GO:0009059;macromolecule biosynthetic process;3.69611733583076e-34!GO:0009058;biosynthetic process;2.32896187352813e-33!GO:0044267;cellular protein metabolic process;3.92593951969163e-33!GO:0044260;cellular macromolecule metabolic process;2.92106960395138e-32!GO:0005681;spliceosome;6.96550127774613e-32!GO:0046907;intracellular transport;7.32308197383752e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.51764853039604e-32!GO:0007049;cell cycle;3.78845348300234e-31!GO:0045184;establishment of protein localization;5.12191978557116e-31!GO:0022607;cellular component assembly;5.19178644005147e-31!GO:0000166;nucleotide binding;5.19989205328889e-31!GO:0008104;protein localization;8.43799388744998e-31!GO:0005694;chromosome;6.30322669832034e-30!GO:0005829;cytosol;2.38653026606579e-28!GO:0006974;response to DNA damage stimulus;9.0400680455491e-28!GO:0051276;chromosome organization and biogenesis;1.31657155685429e-27!GO:0044451;nucleoplasm part;1.65940646683895e-27!GO:0005730;nucleolus;6.42080757290653e-26!GO:0044427;chromosomal part;1.17262298411905e-25!GO:0044445;cytosolic part;1.890939406221e-25!GO:0005740;mitochondrial envelope;3.83218812265787e-25!GO:0006281;DNA repair;4.53469901295933e-25!GO:0006886;intracellular protein transport;4.57867035763683e-25!GO:0016462;pyrophosphatase activity;4.33605606421745e-24!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.61968522384777e-24!GO:0019866;organelle inner membrane;7.32517813532637e-24!GO:0051649;establishment of cellular localization;7.38555125560132e-24!GO:0016817;hydrolase activity, acting on acid anhydrides;9.03759740552895e-24!GO:0031966;mitochondrial membrane;9.77693541251468e-24!GO:0017111;nucleoside-triphosphatase activity;1.80953094212223e-23!GO:0051641;cellular localization;2.65625157464912e-23!GO:0022402;cell cycle process;3.53091107989696e-23!GO:0000278;mitotic cell cycle;3.6585151414633e-23!GO:0015935;small ribosomal subunit;2.75928023009304e-22!GO:0006325;establishment and/or maintenance of chromatin architecture;2.83972339977742e-22!GO:0005743;mitochondrial inner membrane;7.68610916602771e-22!GO:0022618;protein-RNA complex assembly;1.28762364863939e-21!GO:0015934;large ribosomal subunit;2.46232878644478e-21!GO:0006323;DNA packaging;2.96830557065763e-21!GO:0031980;mitochondrial lumen;1.58273843769125e-20!GO:0005759;mitochondrial matrix;1.58273843769125e-20!GO:0006119;oxidative phosphorylation;1.67905566984445e-20!GO:0032553;ribonucleotide binding;3.23093156237264e-20!GO:0032555;purine ribonucleotide binding;3.23093156237264e-20!GO:0016874;ligase activity;4.40094976762338e-20!GO:0044455;mitochondrial membrane part;6.93729607314628e-20!GO:0006260;DNA replication;7.69773299971868e-20!GO:0019222;regulation of metabolic process;9.45440724188613e-20!GO:0009719;response to endogenous stimulus;4.40689749123761e-19!GO:0006457;protein folding;5.9932061059365e-19!GO:0006350;transcription;7.16189298960555e-19!GO:0008135;translation factor activity, nucleic acid binding;8.02068726994177e-19!GO:0006512;ubiquitin cycle;8.5397225829207e-19!GO:0017076;purine nucleotide binding;9.76177705977567e-19!GO:0042254;ribosome biogenesis and assembly;2.28315642547065e-18!GO:0008134;transcription factor binding;5.09404385392091e-18!GO:0022403;cell cycle phase;5.09404385392091e-18!GO:0000087;M phase of mitotic cell cycle;5.58250330295175e-18!GO:0007067;mitosis;1.21445926330045e-17!GO:0005524;ATP binding;4.29616024716989e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.34948378167829e-17!GO:0032559;adenyl ribonucleotide binding;4.67012598803041e-17!GO:0031323;regulation of cellular metabolic process;7.56583821397093e-17!GO:0004386;helicase activity;8.04990457962094e-17!GO:0000398;nuclear mRNA splicing, via spliceosome;8.82414591502222e-17!GO:0000375;RNA splicing, via transesterification reactions;8.82414591502222e-17!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;8.82414591502222e-17!GO:0003677;DNA binding;2.33803039524828e-16!GO:0051301;cell division;2.48444987906321e-16!GO:0050794;regulation of cellular process;4.54071806546053e-16!GO:0005746;mitochondrial respiratory chain;4.90995170751152e-16!GO:0042623;ATPase activity, coupled;5.77207651285024e-16!GO:0032774;RNA biosynthetic process;6.095542537989e-16!GO:0006351;transcription, DNA-dependent;9.92447927313603e-16!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.19406232337496e-15!GO:0016887;ATPase activity;1.32305364350464e-15!GO:0006333;chromatin assembly or disassembly;1.56680187684348e-15!GO:0010468;regulation of gene expression;1.56680187684348e-15!GO:0031965;nuclear membrane;1.85812387794533e-15!GO:0030554;adenyl nucleotide binding;1.93623934885362e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.29044914901556e-15!GO:0065004;protein-DNA complex assembly;2.38804370045425e-15!GO:0016568;chromatin modification;4.99833911746768e-15!GO:0050136;NADH dehydrogenase (quinone) activity;7.94583793923814e-15!GO:0003954;NADH dehydrogenase activity;7.94583793923814e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;7.94583793923814e-15!GO:0000279;M phase;8.49691165921481e-15!GO:0005761;mitochondrial ribosome;1.37680781469464e-14!GO:0000313;organellar ribosome;1.37680781469464e-14!GO:0000785;chromatin;1.71875982930193e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.91015024888366e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.05305007064176e-14!GO:0005635;nuclear envelope;2.67464086409574e-14!GO:0012505;endomembrane system;3.03988655295394e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;4.41641485769297e-14!GO:0019941;modification-dependent protein catabolic process;5.17512151543295e-14!GO:0043632;modification-dependent macromolecule catabolic process;5.17512151543295e-14!GO:0044453;nuclear membrane part;7.6014695357196e-14!GO:0045449;regulation of transcription;7.64706475909066e-14!GO:0008026;ATP-dependent helicase activity;1.03067227776954e-13!GO:0044265;cellular macromolecule catabolic process;1.13657197628824e-13!GO:0044257;cellular protein catabolic process;1.20657813172414e-13!GO:0006413;translational initiation;1.72713677139242e-13!GO:0003743;translation initiation factor activity;1.76486248871825e-13!GO:0015630;microtubule cytoskeleton;2.05180567773349e-13!GO:0006403;RNA localization;2.59189292157837e-13!GO:0005643;nuclear pore;2.83980500927929e-13!GO:0051082;unfolded protein binding;2.95026633592335e-13!GO:0016604;nuclear body;3.04341215253651e-13!GO:0006399;tRNA metabolic process;3.7733829543999e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.48601723004516e-13!GO:0042773;ATP synthesis coupled electron transport;4.48601723004516e-13!GO:0050657;nucleic acid transport;5.76656302954588e-13!GO:0051236;establishment of RNA localization;5.76656302954588e-13!GO:0050658;RNA transport;5.76656302954588e-13!GO:0043412;biopolymer modification;5.95603670967602e-13!GO:0006364;rRNA processing;6.76730435260307e-13!GO:0006605;protein targeting;7.04876747042152e-13!GO:0030964;NADH dehydrogenase complex (quinone);8.13579262930304e-13!GO:0045271;respiratory chain complex I;8.13579262930304e-13!GO:0005747;mitochondrial respiratory chain complex I;8.13579262930304e-13!GO:0006355;regulation of transcription, DNA-dependent;1.36140646477051e-12!GO:0016072;rRNA metabolic process;1.97050633133371e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.38379930536161e-12!GO:0048770;pigment granule;2.47017479630393e-12!GO:0042470;melanosome;2.47017479630393e-12!GO:0003712;transcription cofactor activity;5.71988517393522e-12!GO:0050789;regulation of biological process;7.90682383172871e-12!GO:0043285;biopolymer catabolic process;8.40369518984004e-12!GO:0005794;Golgi apparatus;9.02853868571759e-12!GO:0043566;structure-specific DNA binding;1.0547035212436e-11!GO:0006446;regulation of translational initiation;1.60975393726021e-11!GO:0065002;intracellular protein transport across a membrane;3.59922620064422e-11!GO:0000502;proteasome complex (sensu Eukaryota);3.88115721032581e-11!GO:0003697;single-stranded DNA binding;5.84563391838668e-11!GO:0051726;regulation of cell cycle;6.5834918863665e-11!GO:0006334;nucleosome assembly;6.92077636102125e-11!GO:0006464;protein modification process;8.15373343267124e-11!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.8857507378467e-11!GO:0009057;macromolecule catabolic process;9.22525825108403e-11!GO:0008565;protein transporter activity;9.46334666856823e-11!GO:0051028;mRNA transport;9.72627312166919e-11!GO:0000074;regulation of progression through cell cycle;1.03561949787509e-10!GO:0016607;nuclear speck;1.04208991186607e-10!GO:0031497;chromatin assembly;1.25965726516325e-10!GO:0030163;protein catabolic process;1.34000380408629e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.76788693454535e-10!GO:0046930;pore complex;2.35107849071577e-10!GO:0006913;nucleocytoplasmic transport;2.56968364975328e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.5654818828685e-10!GO:0004812;aminoacyl-tRNA ligase activity;3.5654818828685e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.5654818828685e-10!GO:0044248;cellular catabolic process;5.57914508842633e-10!GO:0043038;amino acid activation;6.01814815558904e-10!GO:0006418;tRNA aminoacylation for protein translation;6.01814815558904e-10!GO:0043039;tRNA aminoacylation;6.01814815558904e-10!GO:0051169;nuclear transport;7.60521624375753e-10!GO:0048193;Golgi vesicle transport;7.9854073030006e-10!GO:0030532;small nuclear ribonucleoprotein complex;8.34748116854191e-10!GO:0043687;post-translational protein modification;1.04217893312657e-09!GO:0000775;chromosome, pericentric region;1.10393434393923e-09!GO:0008270;zinc ion binding;1.11628647204741e-09!GO:0006261;DNA-dependent DNA replication;1.76549498659948e-09!GO:0006163;purine nucleotide metabolic process;4.34333982849235e-09!GO:0016779;nucleotidyltransferase activity;5.62353520140254e-09!GO:0006366;transcription from RNA polymerase II promoter;6.65785522303229e-09!GO:0009259;ribonucleotide metabolic process;6.99559062095542e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.01137312582037e-08!GO:0051186;cofactor metabolic process;1.16368855876704e-08!GO:0005819;spindle;1.19909899159492e-08!GO:0006164;purine nucleotide biosynthetic process;1.23414842362097e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.35240169107915e-08!GO:0005667;transcription factor complex;2.01186984654828e-08!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;2.82620804537101e-08!GO:0016192;vesicle-mediated transport;2.83363137374631e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.06800180420246e-08!GO:0009150;purine ribonucleotide metabolic process;5.54221820745871e-08!GO:0009260;ribonucleotide biosynthetic process;5.73498383947611e-08!GO:0008639;small protein conjugating enzyme activity;6.73015793509515e-08!GO:0019829;cation-transporting ATPase activity;8.35325564421808e-08!GO:0004842;ubiquitin-protein ligase activity;9.26904493058912e-08!GO:0000245;spliceosome assembly;9.28047981879428e-08!GO:0017038;protein import;9.65818608917734e-08!GO:0019787;small conjugating protein ligase activity;1.21505146568267e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.63046424151145e-07!GO:0008094;DNA-dependent ATPase activity;1.85560430289669e-07!GO:0003899;DNA-directed RNA polymerase activity;2.00866332865706e-07!GO:0046914;transition metal ion binding;2.10431240263209e-07!GO:0007005;mitochondrion organization and biogenesis;2.57496860212422e-07!GO:0044432;endoplasmic reticulum part;2.60429833540701e-07!GO:0005783;endoplasmic reticulum;2.60429833540701e-07!GO:0032446;protein modification by small protein conjugation;2.69609645462e-07!GO:0005874;microtubule;2.89241326778977e-07!GO:0006732;coenzyme metabolic process;3.74010360633331e-07!GO:0005813;centrosome;3.85845432281111e-07!GO:0007017;microtubule-based process;4.85099327819142e-07!GO:0015986;ATP synthesis coupled proton transport;5.39215381673093e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.39215381673093e-07!GO:0016363;nuclear matrix;5.76153638703467e-07!GO:0051329;interphase of mitotic cell cycle;6.03520334337628e-07!GO:0016567;protein ubiquitination;6.39041345838842e-07!GO:0045259;proton-transporting ATP synthase complex;6.55670113794915e-07!GO:0051427;hormone receptor binding;6.62317278765362e-07!GO:0009141;nucleoside triphosphate metabolic process;6.62317278765362e-07!GO:0016881;acid-amino acid ligase activity;7.0936706555691e-07!GO:0003724;RNA helicase activity;7.35795581613374e-07!GO:0009199;ribonucleoside triphosphate metabolic process;7.41137686537064e-07!GO:0043623;cellular protein complex assembly;7.53871101168932e-07!GO:0003690;double-stranded DNA binding;7.61398941273393e-07!GO:0016564;transcription repressor activity;8.81638344129684e-07!GO:0016740;transferase activity;9.47861794526344e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.01379815823605e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.01379815823605e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.07929424783672e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.07929424783672e-06!GO:0005657;replication fork;1.13035617962513e-06!GO:0005815;microtubule organizing center;1.15033204339077e-06!GO:0003713;transcription coactivator activity;1.36057776453105e-06!GO:0008168;methyltransferase activity;1.37003515082859e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.49487616832058e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.49487616832058e-06!GO:0016741;transferase activity, transferring one-carbon groups;1.50950068208696e-06!GO:0035257;nuclear hormone receptor binding;1.61075023000625e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.64737147046282e-06!GO:0000075;cell cycle checkpoint;1.75971565872748e-06!GO:0005793;ER-Golgi intermediate compartment;1.7846505377645e-06!GO:0007051;spindle organization and biogenesis;1.79958610928978e-06!GO:0045333;cellular respiration;1.97592446336024e-06!GO:0051188;cofactor biosynthetic process;2.1177252772146e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.17778041886395e-06!GO:0009060;aerobic respiration;2.27981244936313e-06!GO:0006461;protein complex assembly;2.93565782169103e-06!GO:0009055;electron carrier activity;3.0279403232334e-06!GO:0044431;Golgi apparatus part;3.20588673121312e-06!GO:0000151;ubiquitin ligase complex;3.37592948166332e-06!GO:0048475;coated membrane;3.37860483690973e-06!GO:0030117;membrane coat;3.37860483690973e-06!GO:0051325;interphase;3.46255549291407e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.58799097509288e-06!GO:0046034;ATP metabolic process;4.281469049904e-06!GO:0006754;ATP biosynthetic process;5.23054031236999e-06!GO:0006753;nucleoside phosphate metabolic process;5.23054031236999e-06!GO:0015631;tubulin binding;5.23054031236999e-06!GO:0005762;mitochondrial large ribosomal subunit;5.50516679699261e-06!GO:0000315;organellar large ribosomal subunit;5.50516679699261e-06!GO:0003682;chromatin binding;5.69588594253324e-06!GO:0031988;membrane-bound vesicle;6.1374355575726e-06!GO:0016023;cytoplasmic membrane-bound vesicle;6.68302800098028e-06!GO:0003924;GTPase activity;7.2579156289696e-06!GO:0016469;proton-transporting two-sector ATPase complex;8.737635123448e-06!GO:0003729;mRNA binding;9.24094575644498e-06!GO:0051168;nuclear export;9.83036384380766e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.11155607333293e-05!GO:0044452;nucleolar part;1.16702123124337e-05!GO:0065007;biological regulation;1.23422759989394e-05!GO:0003714;transcription corepressor activity;1.26354896538554e-05!GO:0006752;group transfer coenzyme metabolic process;1.30864979571384e-05!GO:0003684;damaged DNA binding;1.37551650823391e-05!GO:0006302;double-strand break repair;1.63846069282661e-05!GO:0000226;microtubule cytoskeleton organization and biogenesis;1.78048404761739e-05!GO:0006383;transcription from RNA polymerase III promoter;1.93730462432638e-05!GO:0031324;negative regulation of cellular metabolic process;2.22085132801483e-05!GO:0016563;transcription activator activity;2.59830245311793e-05!GO:0003678;DNA helicase activity;2.90677282999446e-05!GO:0031982;vesicle;3.10562957849784e-05!GO:0009108;coenzyme biosynthetic process;3.13905078221525e-05!GO:0000059;protein import into nucleus, docking;3.40616059591673e-05!GO:0000776;kinetochore;3.57671908072475e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;3.75515548949299e-05!GO:0000786;nucleosome;3.75515548949299e-05!GO:0031410;cytoplasmic vesicle;3.89171669387984e-05!GO:0007059;chromosome segregation;4.46269201815766e-05!GO:0016859;cis-trans isomerase activity;4.60997283421794e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.71890140045222e-05!GO:0043681;protein import into mitochondrion;4.71890140045222e-05!GO:0006352;transcription initiation;4.74190004209063e-05!GO:0006414;translational elongation;4.74190004209063e-05!GO:0000314;organellar small ribosomal subunit;4.7648776995885e-05!GO:0005763;mitochondrial small ribosomal subunit;4.7648776995885e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.04484578930381e-05!GO:0009117;nucleotide metabolic process;5.21148547127103e-05!GO:0008186;RNA-dependent ATPase activity;5.35956923638634e-05!GO:0006310;DNA recombination;5.55694457989776e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.67868799445435e-05!GO:0006613;cotranslational protein targeting to membrane;6.62691249302656e-05!GO:0051052;regulation of DNA metabolic process;7.00686051815272e-05!GO:0008033;tRNA processing;7.48727632266846e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;7.60379416769133e-05!GO:0048471;perinuclear region of cytoplasm;8.32716251808051e-05!GO:0004527;exonuclease activity;8.41792164762523e-05!GO:0006839;mitochondrial transport;8.4792498621128e-05!GO:0005525;GTP binding;8.54216203971788e-05!GO:0005789;endoplasmic reticulum membrane;8.5704774088598e-05!GO:0043021;ribonucleoprotein binding;8.81291439855925e-05!GO:0009892;negative regulation of metabolic process;8.81291439855925e-05!GO:0030120;vesicle coat;8.81291439855925e-05!GO:0030662;coated vesicle membrane;8.81291439855925e-05!GO:0006793;phosphorus metabolic process;0.000100285328901949!GO:0006796;phosphate metabolic process;0.000100285328901949!GO:0045045;secretory pathway;0.000110693283273492!GO:0000139;Golgi membrane;0.000119397458171679!GO:0006099;tricarboxylic acid cycle;0.000125526603857977!GO:0046356;acetyl-CoA catabolic process;0.000125526603857977!GO:0006338;chromatin remodeling;0.000125588393816212!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000126144139327!GO:0006606;protein import into nucleus;0.000129021001104152!GO:0051170;nuclear import;0.000134109466619752!GO:0006084;acetyl-CoA metabolic process;0.000155144602039558!GO:0009056;catabolic process;0.000163837065272902!GO:0004004;ATP-dependent RNA helicase activity;0.000167773089761144!GO:0000228;nuclear chromosome;0.000171051668626143!GO:0051087;chaperone binding;0.000171051668626143!GO:0016853;isomerase activity;0.000177088564026711!GO:0005788;endoplasmic reticulum lumen;0.000179495684929813!GO:0019899;enzyme binding;0.000188268456870957!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000201753922831609!GO:0032508;DNA duplex unwinding;0.00020417467349031!GO:0032392;DNA geometric change;0.00020417467349031!GO:0031072;heat shock protein binding;0.000215862721696741!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000227377816882125!GO:0008017;microtubule binding;0.000235710957558545!GO:0007010;cytoskeleton organization and biogenesis;0.000236823526739913!GO:0051246;regulation of protein metabolic process;0.000244711461352489!GO:0000792;heterochromatin;0.000249080819227365!GO:0005798;Golgi-associated vesicle;0.000274822352970463!GO:0045786;negative regulation of progression through cell cycle;0.00028536773770163!GO:0006626;protein targeting to mitochondrion;0.000298810585832114!GO:0030880;RNA polymerase complex;0.00031421030302592!GO:0016481;negative regulation of transcription;0.000315962879477248!GO:0009109;coenzyme catabolic process;0.000365607807151273!GO:0007052;mitotic spindle organization and biogenesis;0.000377079762370518!GO:0005876;spindle microtubule;0.000424737553102255!GO:0003746;translation elongation factor activity;0.00043832880288901!GO:0005839;proteasome core complex (sensu Eukaryota);0.000482447702687803!GO:0008276;protein methyltransferase activity;0.000488798372028663!GO:0035258;steroid hormone receptor binding;0.000489017503690436!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.000498738345083771!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000501337729546377!GO:0019843;rRNA binding;0.000575811549008874!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000599355308967237!GO:0006268;DNA unwinding during replication;0.000630002461457667!GO:0006289;nucleotide-excision repair;0.000665260531170176!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000668735051615771!GO:0004518;nuclease activity;0.000690275017960197!GO:0032259;methylation;0.000690275017960197!GO:0000049;tRNA binding;0.000743708062442901!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000761809916559946!GO:0000428;DNA-directed RNA polymerase complex;0.000761809916559946!GO:0000922;spindle pole;0.000763206672080881!GO:0030521;androgen receptor signaling pathway;0.000790158511796256!GO:0032200;telomere organization and biogenesis;0.000800516659384121!GO:0000723;telomere maintenance;0.000800516659384121!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.000804925049068631!GO:0006284;base-excision repair;0.000834896071886271!GO:0016787;hydrolase activity;0.000853049034116556!GO:0032561;guanyl ribonucleotide binding;0.000853049034116556!GO:0019001;guanyl nucleotide binding;0.000853049034116556!GO:0006405;RNA export from nucleus;0.000857059653865477!GO:0016251;general RNA polymerase II transcription factor activity;0.000868696267729131!GO:0007006;mitochondrial membrane organization and biogenesis;0.000868696267729131!GO:0005684;U2-dependent spliceosome;0.000907277127243884!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00098385092862749!GO:0016310;phosphorylation;0.00102572156133566!GO:0008250;oligosaccharyl transferase complex;0.00106778232661403!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00108564642479917!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00108564642479917!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00108564642479917!GO:0000082;G1/S transition of mitotic cell cycle;0.00108686345996678!GO:0007093;mitotic cell cycle checkpoint;0.00112293694973283!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00114656295362828!GO:0048523;negative regulation of cellular process;0.00116448498976956!GO:0051920;peroxiredoxin activity;0.00116448498976956!GO:0005768;endosome;0.00117938769395064!GO:0004576;oligosaccharyl transferase activity;0.00118716102330818!GO:0051187;cofactor catabolic process;0.00129063974030626!GO:0051539;4 iron, 4 sulfur cluster binding;0.00140355872372564!GO:0008022;protein C-terminus binding;0.00144565185815456!GO:0005048;signal sequence binding;0.00150186522820217!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00150711147810322!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00155378091723646!GO:0015399;primary active transmembrane transporter activity;0.00155378091723646!GO:0004298;threonine endopeptidase activity;0.0015771434683327!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00160191634774173!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00160191634774173!GO:0040029;regulation of gene expression, epigenetic;0.00169313638016479!GO:0005875;microtubule associated complex;0.00171301698234017!GO:0007088;regulation of mitosis;0.00173294199506869!GO:0009116;nucleoside metabolic process;0.00178634667710712!GO:0006611;protein export from nucleus;0.00180246376154536!GO:0044440;endosomal part;0.0019065607324397!GO:0010008;endosome membrane;0.0019065607324397!GO:0004674;protein serine/threonine kinase activity;0.00200686506863169!GO:0030135;coated vesicle;0.00219735240811756!GO:0043414;biopolymer methylation;0.00220243219508341!GO:0005770;late endosome;0.00220650949782597!GO:0009165;nucleotide biosynthetic process;0.00228687230977908!GO:0051789;response to protein stimulus;0.00244160468334706!GO:0006986;response to unfolded protein;0.00244160468334706!GO:0008654;phospholipid biosynthetic process;0.00256292478265652!GO:0007004;telomere maintenance via telomerase;0.00258573523583183!GO:0044450;microtubule organizing center part;0.00262027532192013!GO:0003702;RNA polymerase II transcription factor activity;0.00273011436030358!GO:0000118;histone deacetylase complex;0.00289633556596935!GO:0031124;mRNA 3'-end processing;0.00301703209657217!GO:0045454;cell redox homeostasis;0.00305077101775034!GO:0006612;protein targeting to membrane;0.00325140651439172!GO:0016584;nucleosome positioning;0.0032822108466722!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0035037249290512!GO:0031570;DNA integrity checkpoint;0.0035037249290512!GO:0009112;nucleobase metabolic process;0.00360637833372721!GO:0005741;mitochondrial outer membrane;0.00363536210299639!GO:0007569;cell aging;0.00363536210299639!GO:0030518;steroid hormone receptor signaling pathway;0.00375143166411661!GO:0008139;nuclear localization sequence binding;0.00384551060320758!GO:0006378;mRNA polyadenylation;0.00401400930516941!GO:0043596;nuclear replication fork;0.00402078957583135!GO:0000781;chromosome, telomeric region;0.00404465087474061!GO:0000178;exosome (RNase complex);0.00404991526755177!GO:0000725;recombinational repair;0.00412232832647591!GO:0000724;double-strand break repair via homologous recombination;0.00412232832647591!GO:0000209;protein polyubiquitination;0.00417107705503819!GO:0042393;histone binding;0.00420535012050718!GO:0008287;protein serine/threonine phosphatase complex;0.0042259780177452!GO:0005637;nuclear inner membrane;0.00428959778652966!GO:0044454;nuclear chromosome part;0.00431864693868763!GO:0006275;regulation of DNA replication;0.00463761352908488!GO:0048500;signal recognition particle;0.00480239431041309!GO:0030118;clathrin coat;0.00485118712662685!GO:0003711;transcription elongation regulator activity;0.00493207431136743!GO:0006270;DNA replication initiation;0.00502211738135386!GO:0012501;programmed cell death;0.00507433718746936!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00509017313592083!GO:0048487;beta-tubulin binding;0.00512792239437589!GO:0016272;prefoldin complex;0.00530773686320988!GO:0000287;magnesium ion binding;0.00558323402954545!GO:0031968;organelle outer membrane;0.00564396304005178!GO:0006595;polyamine metabolic process;0.0057064153016642!GO:0007018;microtubule-based movement;0.00579237718900799!GO:0006144;purine base metabolic process;0.00583055002228378!GO:0009303;rRNA transcription;0.00584357875433564!GO:0018196;peptidyl-asparagine modification;0.0059365403970323!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0059365403970323!GO:0046489;phosphoinositide biosynthetic process;0.00594650654032489!GO:0008312;7S RNA binding;0.0059935070059215!GO:0006400;tRNA modification;0.00599942876095024!GO:0006402;mRNA catabolic process;0.00601606190745761!GO:0006915;apoptosis;0.00612065828618036!GO:0033116;ER-Golgi intermediate compartment membrane;0.00612065828618036!GO:0008652;amino acid biosynthetic process;0.00612065828618036!GO:0051287;NAD binding;0.00624547070823685!GO:0008408;3'-5' exonuclease activity;0.00642030467629081!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0064494693551279!GO:0019867;outer membrane;0.00652307467872485!GO:0004003;ATP-dependent DNA helicase activity;0.00653848067129091!GO:0045892;negative regulation of transcription, DNA-dependent;0.00679100131896669!GO:0043022;ribosome binding;0.0068177193105664!GO:0006278;RNA-dependent DNA replication;0.00697366327587214!GO:0005869;dynactin complex;0.00725813104244723!GO:0006401;RNA catabolic process;0.00738516991358773!GO:0046474;glycerophospholipid biosynthetic process;0.00741677846809754!GO:0042054;histone methyltransferase activity;0.00770274370108248!GO:0005669;transcription factor TFIID complex;0.00773583273160131!GO:0000910;cytokinesis;0.00775587260557838!GO:0046112;nucleobase biosynthetic process;0.00789518813144435!GO:0016569;covalent chromatin modification;0.00814049945394473!GO:0005832;chaperonin-containing T-complex;0.00827102820302343!GO:0030134;ER to Golgi transport vesicle;0.00829714756340938!GO:0043284;biopolymer biosynthetic process;0.00886003056928507!GO:0005905;coated pit;0.00887703098085096!GO:0046128;purine ribonucleoside metabolic process;0.00898468040408996!GO:0042278;purine nucleoside metabolic process;0.00898468040408996!GO:0019783;small conjugating protein-specific protease activity;0.00900672797324257!GO:0030145;manganese ion binding;0.00906591897664549!GO:0050681;androgen receptor binding;0.00906877042996035!GO:0004532;exoribonuclease activity;0.00921955502271627!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00921955502271627!GO:0030127;COPII vesicle coat;0.00922765143102383!GO:0012507;ER to Golgi transport vesicle membrane;0.00922765143102383!GO:0031123;RNA 3'-end processing;0.00943181784606757!GO:0030137;COPI-coated vesicle;0.00951800709880819!GO:0033673;negative regulation of kinase activity;0.00955906774925023!GO:0006469;negative regulation of protein kinase activity;0.00955906774925023!GO:0008180;signalosome;0.00960128742122738!GO:0000819;sister chromatid segregation;0.010110266794135!GO:0009451;RNA modification;0.0101354232364298!GO:0032984;macromolecular complex disassembly;0.0102784649449214!GO:0006891;intra-Golgi vesicle-mediated transport;0.0102895457610585!GO:0006818;hydrogen transport;0.0103517886775203!GO:0016279;protein-lysine N-methyltransferase activity;0.0107026344485314!GO:0018024;histone-lysine N-methyltransferase activity;0.0107026344485314!GO:0016278;lysine N-methyltransferase activity;0.0107026344485314!GO:0000790;nuclear chromatin;0.0107950328594924!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0108079313275319!GO:0015992;proton transport;0.0111826581722967!GO:0004843;ubiquitin-specific protease activity;0.011235192756941!GO:0043492;ATPase activity, coupled to movement of substances;0.0117256075917649!GO:0046966;thyroid hormone receptor binding;0.0117476611946176!GO:0051348;negative regulation of transferase activity;0.0118760290083712!GO:0008170;N-methyltransferase activity;0.0124813694418582!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.012589972403219!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0130073311328292!GO:0000339;RNA cap binding;0.0130073311328292!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0132779736036914!GO:0004722;protein serine/threonine phosphatase activity;0.0135139503898658!GO:0006916;anti-apoptosis;0.0138176824909779!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0138176824909779!GO:0045047;protein targeting to ER;0.0138176824909779!GO:0000077;DNA damage checkpoint;0.0138279023667002!GO:0008097;5S rRNA binding;0.0138279023667002!GO:0000930;gamma-tubulin complex;0.0139543826868332!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0140645834833779!GO:0043601;nuclear replisome;0.0143765497354917!GO:0030894;replisome;0.0143765497354917!GO:0030522;intracellular receptor-mediated signaling pathway;0.0145476157334128!GO:0035267;NuA4 histone acetyltransferase complex;0.0147966964824364!GO:0004221;ubiquitin thiolesterase activity;0.0148431052165899!GO:0003730;mRNA 3'-UTR binding;0.0151662009097848!GO:0043407;negative regulation of MAP kinase activity;0.0151716255687093!GO:0006520;amino acid metabolic process;0.015310553887637!GO:0000070;mitotic sister chromatid segregation;0.0153992670609636!GO:0019238;cyclohydrolase activity;0.0157407860501444!GO:0007021;tubulin folding;0.0162172732020917!GO:0006376;mRNA splice site selection;0.0165976876444179!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0165976876444179!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0166334596613104!GO:0043241;protein complex disassembly;0.0167056362896941!GO:0043624;cellular protein complex disassembly;0.0168597017618246!GO:0005663;DNA replication factor C complex;0.0169851239364056!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0174847608888953!GO:0015002;heme-copper terminal oxidase activity;0.0174847608888953!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0174847608888953!GO:0004129;cytochrome-c oxidase activity;0.0174847608888953!GO:0008219;cell death;0.0175117068135146!GO:0016265;death;0.0175117068135146!GO:0004523;ribonuclease H activity;0.018184449534491!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0182027352914683!GO:0048519;negative regulation of biological process;0.0182027352914683!GO:0030176;integral to endoplasmic reticulum membrane;0.0182027352914683!GO:0006220;pyrimidine nucleotide metabolic process;0.0184339595133512!GO:0030663;COPI coated vesicle membrane;0.0184576761667123!GO:0030126;COPI vesicle coat;0.0184576761667123!GO:0005758;mitochondrial intermembrane space;0.0189084968608667!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0192370758038382!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0194122380507437!GO:0045039;protein import into mitochondrial inner membrane;0.0194122380507437!GO:0007019;microtubule depolymerization;0.0195953953683173!GO:0030867;rough endoplasmic reticulum membrane;0.019836167621988!GO:0000096;sulfur amino acid metabolic process;0.0208894434837395!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0209294095750096!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0211359574240572!GO:0051053;negative regulation of DNA metabolic process;0.0215069639405994!GO:0031970;organelle envelope lumen;0.0216260787323513!GO:0006730;one-carbon compound metabolic process;0.0219213516181124!GO:0031252;leading edge;0.0225204024816462!GO:0006301;postreplication repair;0.0230057574248474!GO:0016585;chromatin remodeling complex;0.0235474129732411!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0236301228741096!GO:0005732;small nucleolar ribonucleoprotein complex;0.023867067198121!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0239725560624594!GO:0006541;glutamine metabolic process;0.0240888536186146!GO:0015980;energy derivation by oxidation of organic compounds;0.024202958004057!GO:0007050;cell cycle arrest;0.024603029182439!GO:0003725;double-stranded RNA binding;0.0250927629665149!GO:0043631;RNA polyadenylation;0.0254302524872429!GO:0005881;cytoplasmic microtubule;0.0258214788386871!GO:0005885;Arp2/3 protein complex;0.0259429579883183!GO:0042770;DNA damage response, signal transduction;0.0259429579883183!GO:0016311;dephosphorylation;0.0259429579883183!GO:0043189;H4/H2A histone acetyltransferase complex;0.0262972273599548!GO:0046467;membrane lipid biosynthetic process;0.0265056820946342!GO:0016570;histone modification;0.026557218927911!GO:0017134;fibroblast growth factor binding;0.026557218927911!GO:0043069;negative regulation of programmed cell death;0.0267557085811988!GO:0051252;regulation of RNA metabolic process;0.0275296188921022!GO:0000726;non-recombinational repair;0.0277775536381718!GO:0000152;nuclear ubiquitin ligase complex;0.0279927077498543!GO:0016790;thiolester hydrolase activity;0.028007569865814!GO:0000175;3'-5'-exoribonuclease activity;0.0282599058075803!GO:0030384;phosphoinositide metabolic process;0.0285836252866824!GO:0008213;protein amino acid alkylation;0.0285836252866824!GO:0006479;protein amino acid methylation;0.0285836252866824!GO:0022890;inorganic cation transmembrane transporter activity;0.028771173331869!GO:0046483;heterocycle metabolic process;0.0288312999193865!GO:0016407;acetyltransferase activity;0.0289957914540999!GO:0000123;histone acetyltransferase complex;0.0289957914540999!GO:0032940;secretion by cell;0.0291840878828403!GO:0003887;DNA-directed DNA polymerase activity;0.0293591278897132!GO:0008143;poly(A) binding;0.0294264268187124!GO:0009309;amine biosynthetic process;0.0299256649507297!GO:0030133;transport vesicle;0.030918639360387!GO:0043066;negative regulation of apoptosis;0.0309956063788865!GO:0005720;nuclear heterochromatin;0.0319530795773084!GO:0019887;protein kinase regulator activity;0.0321129299077324!GO:0030658;transport vesicle membrane;0.0329532175205474!GO:0008601;protein phosphatase type 2A regulator activity;0.0333812699315536!GO:0000097;sulfur amino acid biosynthetic process;0.0335786226672065!GO:0009113;purine base biosynthetic process;0.0337424228563627!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0346926248549906!GO:0045947;negative regulation of translational initiation;0.0350205089784606!GO:0005784;translocon complex;0.035028681885457!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0351195156000735!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0351195156000735!GO:0042791;5S class rRNA transcription;0.0351195156000735!GO:0000127;transcription factor TFIIIC complex;0.0351195156000735!GO:0042797;tRNA transcription from RNA polymerase III promoter;0.0351195156000735!GO:0031371;ubiquitin conjugating enzyme complex;0.0355085599977084!GO:0004721;phosphoprotein phosphatase activity;0.0360931292951944!GO:0042802;identical protein binding;0.0362603035452965!GO:0043130;ubiquitin binding;0.0363465687211199!GO:0032182;small conjugating protein binding;0.0363465687211199!GO:0030496;midbody;0.0364031693943039!GO:0009304;tRNA transcription;0.0378257882518753!GO:0009119;ribonucleoside metabolic process;0.0380713339684716!GO:0008629;induction of apoptosis by intracellular signals;0.0381971206107534!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0384176480518149!GO:0006505;GPI anchor metabolic process;0.0386760208035689!GO:0000805;X chromosome;0.0389218745507392!GO:0001740;Barr body;0.0389218745507392!GO:0032981;mitochondrial respiratory chain complex I assembly;0.039861081730989!GO:0010257;NADH dehydrogenase complex assembly;0.039861081730989!GO:0033108;mitochondrial respiratory chain complex assembly;0.039861081730989!GO:0051540;metal cluster binding;0.0403353128755541!GO:0051536;iron-sulfur cluster binding;0.0403353128755541!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0404398014082262!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0405343512976248!GO:0007264;small GTPase mediated signal transduction;0.0406661233265743!GO:0050773;regulation of dendrite development;0.0410166445518179!GO:0016579;protein deubiquitination;0.0410169404754652!GO:0005652;nuclear lamina;0.0413161492114268!GO:0006406;mRNA export from nucleus;0.041467983429046!GO:0031625;ubiquitin protein ligase binding;0.0415490088108057!GO:0003756;protein disulfide isomerase activity;0.0428041919378467!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0428041919378467!GO:0031057;negative regulation of histone modification;0.0428041919378467!GO:0035067;negative regulation of histone acetylation;0.0428041919378467!GO:0042809;vitamin D receptor binding;0.0428442542373979!GO:0004680;casein kinase activity;0.0432397793954131!GO:0004239;methionyl aminopeptidase activity;0.0439786677794209!GO:0009081;branched chain family amino acid metabolic process;0.0443826948382828!GO:0000188;inactivation of MAPK activity;0.044786846691071!GO:0031577;spindle checkpoint;0.0451199979806995!GO:0047485;protein N-terminus binding;0.0456163073764259!GO:0031529;ruffle organization and biogenesis;0.0459591154735043!GO:0031901;early endosome membrane;0.0461505587057046!GO:0030911;TPR domain binding;0.0467393702619993!GO:0008536;Ran GTPase binding;0.0472362954795888!GO:0030119;AP-type membrane coat adaptor complex;0.04759524234503!GO:0019902;phosphatase binding;0.0486619346389089!GO:0022411;cellular component disassembly;0.048896141855788!GO:0006984;ER-nuclear signaling pathway;0.0491502954597424!GO:0005666;DNA-directed RNA polymerase III complex;0.0493138519824142!GO:0005769;early endosome;0.0497219902473198!GO:0030027;lamellipodium;0.0497219902473198!GO:0022884;macromolecule transmembrane transporter activity;0.0497219902473198!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0497219902473198
|sample_id=10555
|sample_note=
|sample_sex=unknown
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=brain
|top_motifs=NANOG:3.06072828356;CDC5L:2.68503145651;AHR_ARNT_ARNT2:2.55827971502;TFDP1:2.32595834977;FOXM1:2.26868177485;SOX{8,9,10}:2.16957882681;NFY{A,B,C}:2.08171766878;GFI1:2.08066240095;ZNF143:1.98895330292;AIRE:1.98372237459;BREu{core}:1.95372070878;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.87348880384;E2F1..5:1.77334434148;PITX1..3:1.69081497793;NKX6-1,2:1.6701953805;NKX2-3_NKX2-5:1.60518975886;NKX2-1,4:1.59487773657;ONECUT1,2:1.56258881882;OCT4_SOX2{dimer}:1.5613611231;ZIC1..3:1.53264195542;ELK1,4_GABP{A,B1}:1.5020259606;NRF1:1.47795389252;ADNP_IRX_SIX_ZHX:1.46227321295;BPTF:1.41909124962;LHX3,4:1.39390078849;ARID5B:1.38986047767;PATZ1:1.38474815911;MED-1{core}:1.36569693884;PAX4:1.34501428063;TOPORS:1.32774594072;PRRX1,2:1.30815215812;RREB1:1.29641200194;FOXD3:1.27368516805;PAX6:1.26600537535;YY1:1.2442323653;FOXP1:1.22306239629;HOXA9_MEIS1:1.19943426712;ZFP161:1.19449939563;REST:1.18239781868;bHLH_family:1.09457018928;PBX1:1.05969648835;PAX3,7:1.05319881479;CREB1:1.04066302641;PAX5:1.03751290478;ATF4:1.02236333565;EVI1:1.01743595439;PAX1,9:0.994496133188;ZBTB16:0.990569921092;VSX1,2:0.975071922134;POU1F1:0.959753544172;POU6F1:0.956112614157;CDX1,2,4:0.939401807597;STAT1,3:0.926496987701;FOXA2:0.897504484373;ATF5_CREB3:0.868882450439;FOX{I1,J2}:0.850196719783;LEF1_TCF7_TCF7L1,2:0.83275059817;RBPJ:0.832635827654;GATA4:0.820522573776;PAX8:0.775459059676;CUX2:0.76787459331;EGR1..3:0.764035943703;RFX2..5_RFXANK_RFXAP:0.758311575329;POU3F1..4:0.748172618772;NKX3-1:0.7356915696;HOX{A4,D4}:0.719946042156;SOX5:0.718876623471;JUN:0.698815108915;NR1H4:0.695902615914;SOX17:0.689715086662;ZNF384:0.670183707975;HBP1_HMGB_SSRP1_UBTF:0.667294574771;DBP:0.647060952186;CRX:0.646264667182;NHLH1,2:0.575212674015;MZF1:0.538833845772;TEF:0.502600328911;ATF2:0.498679121044;RFX1:0.476437041196;KLF4:0.440086975027;GFI1B:0.437700008056;GTF2I:0.417015209245;HOX{A6,A7,B6,B7}:0.406408156978;TFAP2B:0.34863308693;HOX{A5,B5}:0.34690139729;EN1,2:0.341369016348;SOX2:0.320425473726;HIC1:0.310039353142;MTE{core}:0.292289694178;IKZF2:0.290838617952;POU2F1..3:0.284376123018;MYB:0.243982272422;HMGA1,2:0.171656060603;TGIF1:0.148590258002;MYFfamily:0.148059579822;PDX1:0.136576771613;ALX1:0.135663937005;MAZ:0.112886036946;PRDM1:0.082741098083;FOXL1:0.0777591368637;TAL1_TCF{3,4,12}:0.0330053912642;UFEwm:0.0277143763887;STAT5{A,B}:0.0275107064308;GATA6:0.0234312746051;HNF1A:-0.0289753292588;HSF1,2:-0.0407188618982;XCPE1{core}:-0.041893910065;POU5F1:-0.128021664543;FOXP3:-0.132110956137;FOXQ1:-0.135094302701;NKX2-2,8:-0.147043896581;FOXN1:-0.163480741142;RORA:-0.172074060326;MEF2{A,B,C,D}:-0.222055455235;IKZF1:-0.233604163749;TBP:-0.273672824668;TP53:-0.278363218574;HIF1A:-0.302503099121;FOX{F1,F2,J1}:-0.304818449988;AR:-0.330911051722;HNF4A_NR2F1,2:-0.343571354159;HES1:-0.369306522224;ZNF238:-0.394298105522;NR3C1:-0.402046959401;FOSL2:-0.409832232652;RXR{A,B,G}:-0.43095136764;ZBTB6:-0.444475424418;GTF2A1,2:-0.498199828138;CEBPA,B_DDIT3:-0.501792342507;NR6A1:-0.5329529984;DMAP1_NCOR{1,2}_SMARC:-0.555074233936;SPIB:-0.574457214805;HLF:-0.601225074501;FOX{D1,D2}:-0.606624675394;MYBL2:-0.6158351459;NFIX:-0.624519890683;NFATC1..3:-0.646310791984;NFIL3:-0.652282038309;SNAI1..3:-0.697301723121;NFKB1_REL_RELA:-0.700569198702;SPI1:-0.701778418933;LMO2:-0.706280971822;FOXO1,3,4:-0.721328194812;RUNX1..3:-0.736469591881;MYOD1:-0.739854355792;ELF1,2,4:-0.7423700616;FOS_FOS{B,L1}_JUN{B,D}:-0.768688064924;TLX1..3_NFIC{dimer}:-0.770282122695;BACH2:-0.773386558457;NFE2:-0.77989221999;T:-0.787938590448;GZF1:-0.790556007738;NFE2L2:-0.79446889925;ZEB1:-0.829169347925;SREBF1,2:-0.848211034073;ESRRA:-0.856205482388;ZNF423:-0.856826544622;ATF6:-0.867476883037;HAND1,2:-0.89239392786;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.89245547841;XBP1:-0.894979218658;TFAP2{A,C}:-0.899646798885;PAX2:-0.928601789174;NANOG{mouse}:-1.02573753008;TLX2:-1.03072982963;GCM1,2:-1.04378650111;SRF:-1.04447260074;ETS1,2:-1.05381069489;IRF1,2:-1.05468601706;NFE2L1:-1.08686308819;IRF7:-1.14617286266;SMAD1..7,9:-1.15830160328;MTF1:-1.1691363149;TEAD1:-1.17730768757;PPARG:-1.24006774566;SP1:-1.24036217266;NKX3-2:-1.25497259452;ESR1:-1.29284700927;TFAP4:-1.31775214376;RXRA_VDR{dimer}:-1.31866005832;MAFB:-1.35773970307;ZNF148:-1.41603441061;GLI1..3:-1.44984771447;HMX1:-1.46438250121;NR5A1,2:-1.56789602299;ALX4:-1.576191786;TFCP2:-1.60712597327;TBX4,5:-1.61855430073;EP300:-1.67095328773;EBF1:-1.80300927269;SPZ1:-1.82674851207;STAT2,4,6:-1.98271143863
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10555-107I6;search_select_hide=table117:FF:10555-107I6
}}
}}

Latest revision as of 14:29, 3 June 2020

Name:neuroblastoma cell line:NH-12
Species:Human (Homo sapiens)
Library ID:CNhs11811
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissuebrain
dev stageNA
sexunknown
ageNA
cell typeneuroblast
cell lineNH-12
companyRIKEN Bioresource centre
collaborationYukio Nakamura (RIKEN BRC)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005234
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11811 CAGE DRX007963 DRR008835
Accession ID Hg19

Library idBAMCTSS
CNhs11811 DRZ000260 DRZ001645
Accession ID Hg38

Library idBAMCTSS
CNhs11811 DRZ011610 DRZ012995
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.045
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0.0858
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.364
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.536
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.045
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0.908
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.045
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.123
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.0927
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.202
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.191
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.197
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0.189
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0483
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.762
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.0858
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.00656
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0548
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.045
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.0058
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.545
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.282
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.123
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.123
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11811

Jaspar motifP-value
MA0002.25.80545e-4
MA0003.10.143
MA0004.10.343
MA0006.10.0787
MA0007.10.0992
MA0009.10.141
MA0014.10.473
MA0017.10.00118
MA0018.20.0026
MA0019.10.429
MA0024.12.30812e-6
MA0025.10.596
MA0027.10.801
MA0028.10.159
MA0029.10.77
MA0030.10.929
MA0031.10.282
MA0035.20.543
MA0038.11.04065e-4
MA0039.20.0502
MA0040.10.247
MA0041.10.225
MA0042.10.5
MA0043.10.062
MA0046.10.344
MA0047.20.0752
MA0048.10.581
MA0050.14.50675e-9
MA0051.11.17488e-4
MA0052.10.00786
MA0055.10.816
MA0057.10.114
MA0058.10.358
MA0059.10.309
MA0060.15.23619e-14
MA0061.10.0121
MA0062.20.165
MA0065.20.0032
MA0066.10.059
MA0067.10.945
MA0068.10.529
MA0069.10.779
MA0070.10.499
MA0071.10.194
MA0072.10.342
MA0073.10.259
MA0074.10.0991
MA0076.10.0173
MA0077.10.104
MA0078.10.572
MA0079.20.205
MA0080.21.49944e-11
MA0081.10.197
MA0083.10.0646
MA0084.10.403
MA0087.10.184
MA0088.10.444
MA0090.10.0115
MA0091.10.369
MA0092.10.224
MA0093.10.252
MA0099.25.44045e-19
MA0100.10.516
MA0101.10.0304
MA0102.20.0137
MA0103.10.0718
MA0104.20.0386
MA0105.10.0289
MA0106.10.301
MA0107.10.00763
MA0108.20.458
MA0111.10.918
MA0112.21.31793e-4
MA0113.10.102
MA0114.10.0283
MA0115.10.673
MA0116.10.0167
MA0117.10.978
MA0119.10.136
MA0122.10.373
MA0124.10.691
MA0125.10.143
MA0131.10.383
MA0135.10.527
MA0136.11.9431e-8
MA0137.20.194
MA0138.20.686
MA0139.10.44
MA0140.10.425
MA0141.10.00674
MA0142.10.736
MA0143.10.945
MA0144.10.0113
MA0145.10.101
MA0146.10.0593
MA0147.10.0544
MA0148.10.031
MA0149.10.0423
MA0150.17.9425e-5
MA0152.10.671
MA0153.10.154
MA0154.10.0339
MA0155.10.459
MA0156.10.0022
MA0157.10.0729
MA0159.10.00353
MA0160.10.0181
MA0162.10.253
MA0163.10.0194
MA0164.10.945
MA0258.10.00816
MA0259.10.0551



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11811

Novel motifP-value
10.22
100.309
1000.913
1010.549
1020.739
1030.175
1040.517
1050.406
1060.00363
1070.0196
1080.678
1090.0211
110.0948
1100.268
1110.655
1120.105
1130.691
1140.0894
1150.936
1160.344
1170.214
1180.68
1190.328
120.588
1200.233
1210.972
1220.941
1230.251
1240.472
1250.819
1260.0746
1270.166
1280.047
1290.167
130.0804
1300.612
1310.338
1320.805
1330.558
1340.804
1350.45
1360.565
1370.369
1380.986
1390.426
140.614
1400.383
1410.615
1420.717
1430.0597
1440.812
1450.152
1460.605
1470.547
1480.0153
1490.064
150.206
1500.266
1510.337
1520.0181
1530.723
1540.942
1550.491
1560.637
1570.398
1580.109
1590.00873
160.106
1600.374
1610.919
1620.747
1630.289
1640.166
1650.178
1660.755
1670.416
1680.0574
1690.0187
170.114
180.429
190.14
20.224
200.898
210.283
220.142
230.014
240.135
250.76
260.0536
270.242
280.637
290.213
30.173
300.302
310.576
320.00294
330.348
340.415
350.929
360.799
370.0782
380.285
390.147
40.545
400.204
410.174
420.491
430.134
440.13
450.246
460.185
470.458
480.211
490.304
50.156
500.483
510.427
520.105
530.884
540.188
550.107
560.355
570.906
580.287
590.0204
60.971
600.0219
610.282
620.149
630.18
640.669
650.119
660.47
670.872
680.134
690.345
70.253
700.0081
710.0608
720.225
730.0213
740.241
750.333
760.973
770.0425
780.239
790.0709
80.156
800.0705
810.434
820.225
830.0662
840.605
850.0194
860.409
870.0227
880.671
890.0534
90.165
900.364
910.175
920.0511
930.718
940.223
950.0528
960.257
970.549
980.635
990.377



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11811


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000333 (migratory neural crest cell)
0000003 (native cell)
0000548 (animal cell)
0002321 (embryonic cell)
0000219 (motile cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
171 (neuroectodermal tumor)
3095 (germ cell and embryonal cancer)
2994 (germ cell cancer)
169 (neuroendocrine tumor)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000013 (sympathetic nervous system)
0004121 (ectoderm-derived structure)
0011216 (organ system subdivision)
0002410 (autonomic nervous system)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0000010 (peripheral nervous system)
0001016 (nervous system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100932 (neuroblastoma cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000133 (neurectodermal cell)
CL:0000221 (ectodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

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