FF:10570-108B3: Difference between revisions

Latest revision as of 14:29, 3 June 2020

Name:	leiomyoma cell line:15242A
Species:	Human (Homo sapiens)
Library ID:	CNhs11723
Sample type:	cell lines
Genomic View:	UCSC
RefEX:	Specific genes
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	uterus
dev stage	NA
sex	female
age	NA
cell type	smooth muscle cell
cell line	NA
company	Coriell
collaboration	NA
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.3

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004734

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11723		CAGE		DRX007916		DRR008788

Accession ID Hg19

Library id		BAM		CTSS
CNhs11723		DRZ000213		DRZ001598

Accession ID Hg38

Library id		BAM		CTSS
CNhs11723		DRZ011563		DRZ012948

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0691
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.361
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.27
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.0876
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.304
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.112
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.27
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.306
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.39
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.27
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.77
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	-0.0156
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.759
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0522
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.484
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.27
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.27
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.848
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.726
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0.135
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.555
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.429
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11723

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.528
MA0003.1	MA0003.1	0.286
MA0004.1	MA0004.1	0.764
MA0006.1	MA0006.1	0.255
MA0007.1	MA0007.1	0.139
MA0009.1	MA0009.1	0.454
MA0014.1	MA0014.1	0.882
MA0017.1	MA0017.1	0.834
MA0018.2	MA0018.2	3.99606e-6
MA0019.1	MA0019.1	0.329
MA0024.1	MA0024.1	1.10191e-7
MA0025.1	MA0025.1	3.41601e-4
MA0027.1	MA0027.1	0.67
MA0028.1	MA0028.1	0.323
MA0029.1	MA0029.1	0.918
MA0030.1	MA0030.1	0.0451
MA0031.1	MA0031.1	0.0866
MA0035.2	MA0035.2	0.412
MA0038.1	MA0038.1	0.00117
MA0039.2	MA0039.2	0.512
MA0040.1	MA0040.1	0.572
MA0041.1	MA0041.1	0.563
MA0042.1	MA0042.1	0.964
MA0043.1	MA0043.1	9.78173e-8
MA0046.1	MA0046.1	0.395
MA0047.2	MA0047.2	0.605
MA0048.1	MA0048.1	0.906
MA0050.1	MA0050.1	2.91287e-4
MA0051.1	MA0051.1	0.243
MA0052.1	MA0052.1	0.194
MA0055.1	MA0055.1	0.519
MA0057.1	MA0057.1	0.0195
MA0058.1	MA0058.1	0.592
MA0059.1	MA0059.1	0.254
MA0060.1	MA0060.1	4.47865e-11
MA0061.1	MA0061.1	0.85
MA0062.2	MA0062.2	0.00943
MA0065.2	MA0065.2	0.0217
MA0066.1	MA0066.1	0.0879
MA0067.1	MA0067.1	0.0331
MA0068.1	MA0068.1	0.337
MA0069.1	MA0069.1	0.0828
MA0070.1	MA0070.1	0.0147
MA0071.1	MA0071.1	0.424
MA0072.1	MA0072.1	0.695
MA0073.1	MA0073.1	0.807
MA0074.1	MA0074.1	0.219
MA0076.1	MA0076.1	0.178
MA0077.1	MA0077.1	0.245
MA0078.1	MA0078.1	0.754
MA0079.2	MA0079.2	0.554
MA0080.2	MA0080.2	3.63632e-6
MA0081.1	MA0081.1	0.077
MA0083.1	MA0083.1	0.05
MA0084.1	MA0084.1	0.531
MA0087.1	MA0087.1	0.852
MA0088.1	MA0088.1	0.804
MA0090.1	MA0090.1	0.0961
MA0091.1	MA0091.1	0.263
MA0092.1	MA0092.1	0.289
MA0093.1	MA0093.1	0.693
MA0099.2	MA0099.2	0.0287
MA0100.1	MA0100.1	0.0947
MA0101.1	MA0101.1	0.0451
MA0102.2	MA0102.2	0.00245
MA0103.1	MA0103.1	0.899
MA0104.2	MA0104.2	0.401
MA0105.1	MA0105.1	0.0253
MA0106.1	MA0106.1	0.0401
MA0107.1	MA0107.1	0.0742
MA0108.2	MA0108.2	0.854
MA0111.1	MA0111.1	0.646
MA0112.2	MA0112.2	2.27298e-4
MA0113.1	MA0113.1	0.746
MA0114.1	MA0114.1	0.47
MA0115.1	MA0115.1	0.989
MA0116.1	MA0116.1	0.0409
MA0117.1	MA0117.1	0.958
MA0119.1	MA0119.1	0.0428
MA0122.1	MA0122.1	0.681
MA0124.1	MA0124.1	7.58592e-4
MA0125.1	MA0125.1	0.364
MA0131.1	MA0131.1	0.492
MA0135.1	MA0135.1	0.332
MA0136.1	MA0136.1	1.01939e-6
MA0137.2	MA0137.2	0.0561
MA0138.2	MA0138.2	0.741
MA0139.1	MA0139.1	0.195
MA0140.1	MA0140.1	0.409
MA0141.1	MA0141.1	0.277
MA0142.1	MA0142.1	0.363
MA0143.1	MA0143.1	0.346
MA0144.1	MA0144.1	0.761
MA0145.1	MA0145.1	0.0824
MA0146.1	MA0146.1	0.178
MA0147.1	MA0147.1	0.771
MA0148.1	MA0148.1	0.594
MA0149.1	MA0149.1	0.333
MA0150.1	MA0150.1	0.352
MA0152.1	MA0152.1	0.975
MA0153.1	MA0153.1	0.928
MA0154.1	MA0154.1	0.272
MA0155.1	MA0155.1	0.223
MA0156.1	MA0156.1	5.4302e-4
MA0157.1	MA0157.1	0.501
MA0159.1	MA0159.1	0.0627
MA0160.1	MA0160.1	0.911
MA0162.1	MA0162.1	0.0753
MA0163.1	MA0163.1	5.63833e-4
MA0164.1	MA0164.1	0.409
MA0258.1	MA0258.1	0.0765
MA0259.1	MA0259.1	0.934

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11723

Novel motif	Logo	P-value
1	1	0.0734
10	10	0.576
100	100	0.799
101	101	0.887
102	102	0.966
103	103	0.0222
104	104	0.816
105	105	0.114
106	106	0.0767
107	107	0.299
108	108	0.251
109	109	0.195
11	11	0.0448
110	110	0.185
111	111	0.655
112	112	0.0283
113	113	0.359
114	114	0.0122
115	115	0.0808
116	116	0.0579
117	117	0.268
118	118	0.281
119	119	0.197
12	12	0.776
120	120	0.23
121	121	0.731
122	122	0.398
123	123	0.0427
124	124	0.564
125	125	0.301
126	126	0.924
127	127	0.569
128	128	0.229
129	129	0.829
13	13	0.717
130	130	0.617
131	131	0.415
132	132	0.926
133	133	0.524
134	134	0.303
135	135	0.783
136	136	0.771
137	137	0.649
138	138	0.809
139	139	0.00804
14	14	0.609
140	140	0.935
141	141	0.71
142	142	0.888
143	143	0.03
144	144	0.644
145	145	0.363
146	146	0.962
147	147	0.0518
148	148	0.0612
149	149	0.0217
15	15	0.287
150	150	0.511
151	151	0.524
152	152	0.0593
153	153	0.877
154	154	0.655
155	155	0.162
156	156	0.503
157	157	0.974
158	158	0.0846
159	159	0.257
16	16	0.0188
160	160	0.245
161	161	0.609
162	162	0.487
163	163	0.277
164	164	0.166
165	165	0.683
166	166	0.231
167	167	0.849
168	168	0.93
169	169	0.00964
17	17	0.236
18	18	0.0599
19	19	0.0546
2	2	0.396
20	20	0.499
21	21	0.499
22	22	0.0903
23	23	0.174
24	24	0.465
25	25	0.632
26	26	0.503
27	27	0.153
28	28	0.721
29	29	0.189
3	3	0.146
30	30	0.619
31	31	0.189
32	32	8.11325e-5
33	33	0.949
34	34	0.792
35	35	0.236
36	36	0.352
37	37	0.0173
38	38	0.745
39	39	0.243
4	4	0.843
40	40	0.542
41	41	0.654
42	42	0.674
43	43	0.133
44	44	0.00535
45	45	0.555
46	46	0.0399
47	47	0.106
48	48	0.264
49	49	0.427
5	5	0.526
50	50	0.896
51	51	0.47
52	52	0.812
53	53	0.424
54	54	0.385
55	55	0.162
56	56	0.524
57	57	0.703
58	58	0.742
59	59	0.023
6	6	0.809
60	60	0.482
61	61	0.295
62	62	0.33
63	63	0.278
64	64	0.408
65	65	0.233
66	66	0.49
67	67	0.25
68	68	0.849
69	69	0.0585
7	7	0.734
70	70	0.00802
71	71	0.114
72	72	0.66
73	73	0.0149
74	74	0.454
75	75	0.163
76	76	0.881
77	77	0.0106
78	78	0.786
79	79	0.0157
8	8	0.0293
80	80	0.643
81	81	0.234
82	82	0.00962
83	83	0.748
84	84	0.505
85	85	0.0147
86	86	0.665
87	87	0.0635
88	88	0.897
89	89	0.00256
9	9	0.591
90	90	0.879
91	91	0.311
92	92	0.19
93	93	0.994
94	94	0.48
95	95	0.317
96	96	0.339
97	97	0.688
98	98	0.601
99	99	0.056

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11723

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102694 leiomyoma cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)

DOID: Disease
4 (disease)
14566 (disease of cellular proliferation)
0060072 (benign neoplasm)
0060084 (cell type benign neoplasm)
127 (leiomyoma)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000995 (uterus)
0003134 (female reproductive organ)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0102694 (leiomyoma cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005795 (embryonic uterus)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0005795,UBERON:0000995,UBERON:0003134,UBERON:0000926,UBERON:0000479,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000480,UBERON:0000923,UBERON:0000990,UBERON:0002050,UBERON:0005423,UBERON:0000467,UBERON:0001062,UBERON:0005291,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0006598,UBERON:0002532,UBERON:0003100,UBERON:0000474,UBERON:0006603
+|DRA_sample_Accession=CAGE@SAMD00004734
+|accession_numbers=CAGE;DRX007916;DRR008788;DRZ000213;DRZ001598;DRZ011563;DRZ012948
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000995,UBERON:0003134,UBERON:0005156,UBERON:0000062,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000990,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003133,UBERON:0003975,UBERON:0004175,UBERON:0010317,UBERON:0003100,UBERON:0000474
 |ancestors_in_cell_lineage_facet=CL:0000000
 |ancestors_in_disease_facet=DOID:4,DOID:14566,DOID:0060072,DOID:0060084,DOID:127
+|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0102694
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr11:46299539..46299620,+!p2@CREB3L1!1.61!66.55!CREB3L1;;chr11:46299199..46299233,+!p1@CREB3L1!1.47!140.87!CREB3L1;;chr7:27224842..27224872,-!p1@HOXA11!1.46!27.66!HOXA11;;chr11:65686802..65686818,+!p6@DRAP1!1.45!46.67!DRAP1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.43!25.93!ZBED1;;chr4:174451370..174451387,-!p1@HAND2!1.42!25.06!HAND2;;chr7:27224795..27224840,-!p2@HOXA11!1.34!20.74!HOXA11;;chr2:19558373..19558392,-!p1@OSR1!1.33!54.45!OSR1;;chr16:86544113..86544145,+!p1@FOXF1!1.33!25.06!FOXF1;;chr2:176969228..176969260,+!p1@HOXD11!1.30!19.01!HOXD11;;chr3:141150883..141150961,+!p6@ZBTB38!1.24!16.42!ZBTB38;;chr11:65687362..65687436,+!p3@DRAP1!1.23!72.59!DRAP1;;chr9:35732647..35732678,+!p2@CREB3!1.21!83.83!CREB3;;chr1:151032860..151032918,+!p1@MLLT11!1.15!152.97!MLLT11;;chr11:32457075..32457095,-!p1@WT1!1.14!12.96!WT1;;chr4:174450089..174450153,-!p2@HAND2!1.12!12.10!HAND2;;chr6:10412600..10412637,-!p1@TFAP2A!1.07!18.15!TFAP2A;;chr3:25470156..25470227,+!p2@RARB!1.06!10.37!RARB;;chr10:119303078..119303169,+!p2@EMX2!1.06!10.37!EMX2;;chr11:65687222..65687240,+!p7@DRAP1!1.02!12.10!DRAP1;;chr19:13134772..13134822,+!p2@NFIX!1.01!13.83!NFIX;;chr18:19749541..19749557,+!p1@GATA6!1.00!28.52!GATA6;;chr15:96876966..96877017,+!p12@NR2F2!1.00!12.96!NR2F2;;chr1:151032922..151032951,+!p2@MLLT11!0.96!13.83!MLLT11;;chr2:176969179..176969226,+!p2@HOXD11!0.94!7.78!HOXD11;;chr3:141151009..141151033,+!p10@ZBTB38!0.94!7.78!ZBTB38;;chr11:65686732..65686756,+!p2@DRAP1!0.93!32.84!DRAP1;;chr11:61520075..61520136,+!p1@C11orf9!0.93!16.42!C11orf9;;chr11:65687243..65687276,+!p8@DRAP1!0.93!10.37!DRAP1;;chr11:8102846..8102892,+!p1@TUB!0.92!10.37!TUB;;chr9:35732514..35732530,+!p5@CREB3!0.91!10.37!CREB3;;chr15:96869255..96869291,+!p6@NR2F2!0.90!12.96!NR2F2;;chr6:10415276..10415341,-!p2@TFAP2A!0.90!8.64!TFAP2A;;chr3:138665937..138665968,-!p1@FOXL2!0.90!6.91!FOXL2;;chr3:69811899..69811913,+!p11@MITF!0.90!6.91!MITF;;chr11:46299443..46299459,+!p4@CREB3L1!0.90!6.91!CREB3L1;;chr5:92918919..92918942,+!p1@NR2F1!0.88!31.11!NR2F1;;chr15:42749722..42749739,-!p2@ZFP106!0.88!12.10!ZFP106;;chr5:72743793..72743855,-!p4@FOXD1!0.88!7.78!FOXD1;;chr5:92919375..92919438,+!p6@NR2F1!0.87!6.91!NR2F1;;chr1:151032782..151032801,+!p4@MLLT11!0.86!12.96!MLLT11;;chr12:124873357..124873401,-!p1@NCOR2!0.85!75.19!NCOR2;;chr3:128206762..128206781,-!p2@GATA2!0.85!40.62!GATA2;;chr3:69811882..69811898,+!p6@MITF!0.85!6.05!MITF;;chr4:174451350..174451363,-!p3@HAND2!0.85!6.05!HAND2;;chr6:28321909..28321965,-!p3@ZNF323!0.85!6.05!ZNF323;;chr2:239756671..239756732,+!p1@TWIST2!0.84!19.88!TWIST2;;chr15:96869222..96869251,+!p18@NR2F2!0.83!6.91!NR2F2;;chr17:3571863..3571881,-!p1@TAX1BP3!0.82!427.79!TAX1BP3;;chr18:19749517..19749531,+!p3@GATA6!0.82!10.37!GATA6;;chr9:2158443..2158481,+!p2@SMARCA2!0.81!16.42!SMARCA2;;chr1:151032739..151032748,+!p6@MLLT11!0.81!6.91!MLLT11;;chr17:46126136..46126152,+!p1@NFE2L1!0.79!291.24!NFE2L1;;chr12:124873852..124873881,-!p3@NCOR2!0.79!33.70!NCOR2;;chr6:10412392..10412409,-!p4@TFAP2A!0.79!6.05!TFAP2A;;chr19:47523058..47523114,+!p1@NPAS1!0.79!5.19!NPAS1;;chr11:46333979..46333991,+!p7@CREB3L1!0.79!5.19!CREB3L1;;chr16:31076332..31076388,-!p3@ZNF668!0.79!5.19!ZNF668;;chr16:69419590..69419601,-!p5@TERF2!0.79!5.19!TERF2;;chr10:77161133..77161176,-!p3@ZNF503!0.77!11.23!ZNF503;;chr15:96869114..96869160,+!p11@NR2F2!0.77!6.91!NR2F2;;chr5:72744594..72744609,-!p1@FOXD1!0.75!23.33!FOXD1;;chr19:13134457..13134462,+!p5@NFIX!0.75!8.64!NFIX;;chr20:55204351..55204377,+!p1@TFAP2C!0.75!6.05!TFAP2C;;chr11:65687158..65687216,+!p4@DRAP1!0.74!28.52!DRAP1;;chr6:34204921..34204939,+!p3@HMGA1!0.73!148.65!HMGA1;;chr17:59477233..59477263,+!p1@TBX2!0.73!14.69!TBX2;;chr15:96869206..96869220,+!p21@NR2F2!0.73!4.32!NR2F2;;chr11:32457103..32457123,-!p3@WT1!0.73!4.32!WT1;;chr11:46333934..46333963,+!p5@CREB3L1!0.73!4.32!CREB3L1;;chr3:69811858..69811881,+!p5@MITF!0.73!4.32!MITF;;chr6:10412576..10412599,-!p5@TFAP2A!0.73!4.32!TFAP2A;;chr6:28321971..28321995,-!p1@ZNF323!0.73!4.32!ZNF323;;chr7:27192185..27192209,-!p1@HOXA3!0.73!4.32!HOXA3;;chr11:65686952..65686975,+!p5@DRAP1!0.70!25.06!DRAP1;;chr11:65667884..65667895,-!p2@FOSL1!0.70!17.28!FOSL1;;chr5:72744445..72744466,-!p2@FOXD1!0.69!6.91!FOXD1;;chr3:178789993..178790049,-!p5@ZMAT3!0.69!6.05!ZMAT3;;chr3:52001448..52001478,-!p2@PCBP4!0.68!60.50!PCBP4;;chr15:37390850..37390909,-!p3@MEIS2!0.67!7.78!MEIS2;;chr15:96874216..96874236,+!p13@NR2F2!0.67!6.05!NR2F2;;chr9:35732561..35732587,+!p3@CREB3!0.66!17.28!CREB3;;chr20:50721803..50721857,-!p2@ZFP64!0.66!6.05!ZFP64;;chr11:65686776..65686787,+!p9@DRAP1!0.66!4.32!DRAP1;;chr9:35732592..35732640,+!p1@CREB3!0.65!53.58!CREB3;;chr15:37392576..37392589,-!p12@MEIS2!0.65!4.32!MEIS2;;chr5:92919100..92919135,+!p3@NR2F1!0.65!4.32!NR2F1;;chr5:139492456..139492489,+!p7@PURA!0.65!3.46!PURA;;chr5:92918768..92918783,+!p8@NR2F1!0.65!3.46!NR2F1;;chr2:176994408..176994492,+!p1@HOXD8!0.65!3.46!HOXD8;;chr3:138665969..138665993,-!p2@FOXL2!0.65!3.46!FOXL2;;chr3:141121871..141121885,+!p13@ZBTB38!0.65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+|ffid_belonging_in_development=UBERON:0002532,UBERON:0006603,UBERON:0005795,UBERON:0010316
 |fonse_cell_line=FF:0102694
 |fonse_cell_line_closure=FF:0102694
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/leiomyoma%2520cell%2520line%253a15242A.CNhs11723.10570-108B3.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/leiomyoma%2520cell%2520line%253a15242A.CNhs11723.10570-108B3.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.cell_line.hCAGE/leiomyoma%2520cell%2520line%253a15242A.CNhs11723.10570-108B3.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/leiomyoma%2520cell%2520line%253a15242A.CNhs11723.10570-108B3.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.cell_line.hCAGE/leiomyoma%2520cell%2520line%253a15242A.CNhs11723.10570-108B3.hg38.nobarcode.ctss.bed.gz
 |id=FF:10570-108B3
-|is_a=EFO:0002091;;FF:0000003;;FF:0000210;;FF:0102694
+|is_a=EFO:0002091;;FF:0000210;;FF:0102694
+|is_obsolete=
+|library_id=CNhs11723
+|library_id_phase_based=2:CNhs11723
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10570
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10570
 |name=leiomyoma cell line:15242A
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11723,LSID819,release009,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=108
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=19.535
 |sample_age=
+|sample_category=cell lines
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 91: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.55869561465987e-232!GO:0005737;cytoplasm;2.0147641706118e-207!GO:0044444;cytoplasmic part;5.15270362372264e-169!GO:0043226;organelle;3.07406208103985e-134!GO:0043229;intracellular organelle;7.90728101487767e-134!GO:0043231;intracellular membrane-bound organelle;8.54403888554251e-127!GO:0043227;membrane-bound organelle;1.16258175806895e-126!GO:0044422;organelle part;8.26378439150662e-122!GO:0044446;intracellular organelle part;2.51799603134063e-120!GO:0032991;macromolecular complex;1.69181935653646e-85!GO:0030529;ribonucleoprotein complex;7.72159730124555e-77!GO:0005739;mitochondrion;2.19612109077077e-72!GO:0005515;protein binding;3.0626169123676e-64!GO:0031090;organelle membrane;1.49427303557796e-63!GO:0043233;organelle lumen;2.92865344578363e-57!GO:0031974;membrane-enclosed lumen;2.92865344578363e-57!GO:0044238;primary metabolic process;7.95407532042898e-55!GO:0044237;cellular metabolic process;1.14076510452115e-53!GO:0019538;protein metabolic process;2.1970235725064e-51!GO:0005840;ribosome;2.38535514622651e-51!GO:0003723;RNA binding;2.65704270405433e-51!GO:0044429;mitochondrial part;8.71930195489624e-49!GO:0044428;nuclear part;2.14777201152115e-46!GO:0009058;biosynthetic process;1.86319664163195e-45!GO:0044260;cellular macromolecule metabolic process;2.33959876432333e-45!GO:0003735;structural constituent of ribosome;3.08334195922369e-45!GO:0043170;macromolecule metabolic process;3.66685419778444e-45!GO:0015031;protein transport;3.95418240246433e-45!GO:0006412;translation;1.06184639874063e-44!GO:0044267;cellular protein metabolic process;3.48554283096065e-44!GO:0033036;macromolecule localization;9.90764083423666e-44!GO:0045184;establishment of protein localization;9.72296385925613e-43!GO:0043234;protein complex;1.52613330274649e-42!GO:0008104;protein localization;1.06774313013696e-41!GO:0031967;organelle envelope;4.04640945722611e-41!GO:0031975;envelope;9.49977858870053e-41!GO:0005829;cytosol;1.3227697620854e-40!GO:0016043;cellular component organization and biogenesis;7.75276315299521e-40!GO:0009059;macromolecule biosynthetic process;9.21502201817012e-40!GO:0044249;cellular biosynthetic process;4.08850363286457e-38!GO:0033279;ribosomal subunit;1.23046069956388e-37!GO:0006396;RNA processing;5.53754014241986e-36!GO:0046907;intracellular transport;1.39703221944231e-34!GO:0005740;mitochondrial envelope;1.32097969302574e-32!GO:0031966;mitochondrial membrane;8.6074263139485e-31!GO:0005783;endoplasmic reticulum;1.5731246947276e-29!GO:0006886;intracellular protein transport;2.91965450833921e-29!GO:0019866;organelle inner membrane;6.27717508037333e-29!GO:0005743;mitochondrial inner membrane;4.79235828043334e-28!GO:0031981;nuclear lumen;7.87174086230781e-28!GO:0012505;endomembrane system;2.70990293197473e-27!GO:0016071;mRNA metabolic process;6.87595653838128e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.10576670347737e-26!GO:0008380;RNA splicing;3.43472791019634e-26!GO:0006119;oxidative phosphorylation;2.648144588955e-25!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.14567065254957e-24!GO:0065003;macromolecular complex assembly;4.70990413363905e-24!GO:0006397;mRNA processing;1.44776851674026e-23!GO:0044445;cytosolic part;2.76707842352724e-23!GO:0044455;mitochondrial membrane part;2.83618663875919e-23!GO:0051649;establishment of cellular localization;7.68103449053973e-23!GO:0044432;endoplasmic reticulum part;9.84802549443051e-23!GO:0051641;cellular localization;1.79976364639735e-22!GO:0022607;cellular component assembly;2.33033823218617e-22!GO:0006457;protein folding;4.63126146452586e-22!GO:0005794;Golgi apparatus;1.46845739594362e-21!GO:0005634;nucleus;6.50318019726807e-20!GO:0015934;large ribosomal subunit;9.51349244017375e-20!GO:0043228;non-membrane-bound organelle;2.04054738333275e-19!GO:0043232;intracellular non-membrane-bound organelle;2.04054738333275e-19!GO:0031980;mitochondrial lumen;3.46032482261736e-19!GO:0005759;mitochondrial matrix;3.46032482261736e-19!GO:0005746;mitochondrial respiratory chain;6.35539025531276e-19!GO:0015935;small ribosomal subunit;9.53328099041165e-19!GO:0005681;spliceosome;2.22143201141134e-18!GO:0051186;cofactor metabolic process;2.61234985098114e-18!GO:0048770;pigment granule;1.47035796189261e-17!GO:0042470;melanosome;1.47035796189261e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.63179624435427e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.73176383262668e-17!GO:0006996;organelle organization and biogenesis;1.78669710229397e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;2.00149131197899e-17!GO:0016462;pyrophosphatase activity;2.64255317077307e-17!GO:0000502;proteasome complex (sensu Eukaryota);1.01457415670521e-16!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.23386676429179e-16!GO:0043285;biopolymer catabolic process;1.83600538267599e-16!GO:0017111;nucleoside-triphosphatase activity;2.26187989457524e-16!GO:0016874;ligase activity;2.26187989457524e-16!GO:0009057;macromolecule catabolic process;4.0676187561238e-16!GO:0050136;NADH dehydrogenase (quinone) activity;4.42080104089366e-16!GO:0003954;NADH dehydrogenase activity;4.42080104089366e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.42080104089366e-16!GO:0005789;endoplasmic reticulum membrane;4.97423121517694e-16!GO:0016192;vesicle-mediated transport;6.48081429646577e-16!GO:0005654;nucleoplasm;6.9629676067457e-16!GO:0051082;unfolded protein binding;7.9637360497702e-16!GO:0044248;cellular catabolic process;1.32270335601554e-15!GO:0044265;cellular macromolecule catabolic process;1.88624679979195e-15!GO:0005761;mitochondrial ribosome;2.0641095939101e-15!GO:0000313;organellar ribosome;2.0641095939101e-15!GO:0006512;ubiquitin cycle;3.46846866608299e-15!GO:0022618;protein-RNA complex assembly;1.1160481649315e-14!GO:0030964;NADH dehydrogenase complex (quinone);1.65753076215155e-14!GO:0045271;respiratory chain complex I;1.65753076215155e-14!GO:0005747;mitochondrial respiratory chain complex I;1.65753076215155e-14!GO:0048193;Golgi vesicle transport;1.80437682583809e-14!GO:0042775;organelle ATP synthesis coupled electron transport;1.89799392271308e-14!GO:0042773;ATP synthesis coupled electron transport;1.89799392271308e-14!GO:0030163;protein catabolic process;1.89799392271308e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.73985505857143e-14!GO:0005730;nucleolus;3.5479539139274e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.71374805735608e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);8.8155933207804e-14!GO:0043283;biopolymer metabolic process;9.57472474476518e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;9.7052586610318e-14!GO:0006605;protein targeting;1.52162039612819e-13!GO:0008135;translation factor activity, nucleic acid binding;1.65690117804016e-13!GO:0044257;cellular protein catabolic process;1.65690117804016e-13!GO:0019941;modification-dependent protein catabolic process;1.93230441036176e-13!GO:0043632;modification-dependent macromolecule catabolic process;1.93230441036176e-13!GO:0009259;ribonucleotide metabolic process;2.76787394769786e-13!GO:0006732;coenzyme metabolic process;2.91710888484822e-13!GO:0044451;nucleoplasm part;3.58823370229576e-13!GO:0006511;ubiquitin-dependent protein catabolic process;3.7619517296046e-13!GO:0010467;gene expression;4.24180953911131e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);5.74168286876419e-13!GO:0000166;nucleotide binding;6.46155323107432e-13!GO:0009055;electron carrier activity;8.04424138749835e-13!GO:0006163;purine nucleotide metabolic process;1.0425442996631e-12!GO:0009150;purine ribonucleotide metabolic process;1.86608086397594e-12!GO:0005793;ER-Golgi intermediate compartment;2.07338557253659e-12!GO:0009199;ribonucleoside triphosphate metabolic process;2.84010047167305e-12!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.06913724458964e-12!GO:0009144;purine nucleoside triphosphate metabolic process;5.06913724458964e-12!GO:0016491;oxidoreductase activity;5.55258121139353e-12!GO:0009141;nucleoside triphosphate metabolic process;6.11655784758759e-12!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;9.76062690308722e-12!GO:0009260;ribonucleotide biosynthetic process;1.76329692031771e-11!GO:0006164;purine nucleotide biosynthetic process;2.00405741479382e-11!GO:0009152;purine ribonucleotide biosynthetic process;3.55234011171167e-11!GO:0009056;catabolic process;5.44727067341303e-11!GO:0000398;nuclear mRNA splicing, via spliceosome;7.1173532948836e-11!GO:0000375;RNA splicing, via transesterification reactions;7.1173532948836e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.1173532948836e-11!GO:0008134;transcription factor binding;8.23202685625964e-11!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.22563077549377e-10!GO:0003743;translation initiation factor activity;1.36014799528517e-10!GO:0009142;nucleoside triphosphate biosynthetic process;1.37940115711436e-10!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.37940115711436e-10!GO:0012501;programmed cell death;1.38681284452091e-10!GO:0044431;Golgi apparatus part;1.57920437870404e-10!GO:0042254;ribosome biogenesis and assembly;1.60274156524658e-10!GO:0046034;ATP metabolic process;1.9481626940265e-10!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.41485348131941e-10!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.41485348131941e-10!GO:0043412;biopolymer modification;3.2015942548793e-10!GO:0005773;vacuole;3.2015942548793e-10!GO:0019787;small conjugating protein ligase activity;3.21381221590871e-10!GO:0008639;small protein conjugating enzyme activity;3.34773024617119e-10!GO:0006915;apoptosis;3.6602916517819e-10!GO:0015986;ATP synthesis coupled proton transport;4.55986059434662e-10!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.55986059434662e-10!GO:0015078;hydrogen ion transmembrane transporter activity;5.61724802976008e-10!GO:0008565;protein transporter activity;6.51610532602885e-10!GO:0004842;ubiquitin-protein ligase activity;6.80548202183539e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.04900114112959e-10!GO:0005635;nuclear envelope;8.98327272765252e-10!GO:0008219;cell death;9.29693245096114e-10!GO:0016265;death;9.29693245096114e-10!GO:0019829;cation-transporting ATPase activity;1.17164706615578e-09!GO:0006464;protein modification process;1.59820456399281e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.77535075228179e-09!GO:0005768;endosome;1.87776728291716e-09!GO:0006413;translational initiation;2.01297331118678e-09!GO:0016881;acid-amino acid ligase activity;4.3200935260695e-09!GO:0016469;proton-transporting two-sector ATPase complex;4.50800450546266e-09!GO:0005788;endoplasmic reticulum lumen;4.61458636332579e-09!GO:0006888;ER to Golgi vesicle-mediated transport;5.26069085678504e-09!GO:0006461;protein complex assembly;7.20777720191805e-09!GO:0017076;purine nucleotide binding;7.59657943204207e-09!GO:0051188;cofactor biosynthetic process;8.05492002985995e-09!GO:0006754;ATP biosynthetic process;8.71571269747469e-09!GO:0006753;nucleoside phosphate metabolic process;8.71571269747469e-09!GO:0006091;generation of precursor metabolites and energy;9.74289852431222e-09!GO:0032553;ribonucleotide binding;1.26615250682608e-08!GO:0032555;purine ribonucleotide binding;1.26615250682608e-08!GO:0009117;nucleotide metabolic process;1.27733286584816e-08!GO:0009060;aerobic respiration;1.39832302108387e-08!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.49081140650971e-08!GO:0006446;regulation of translational initiation;1.67873619167132e-08!GO:0031965;nuclear membrane;1.72390855867118e-08!GO:0030120;vesicle coat;1.83367857219849e-08!GO:0030662;coated vesicle membrane;1.83367857219849e-08!GO:0000323;lytic vacuole;1.99760397866134e-08!GO:0005764;lysosome;1.99760397866134e-08!GO:0000139;Golgi membrane;2.06962995640654e-08!GO:0043069;negative regulation of programmed cell death;4.8242680766321e-08!GO:0045333;cellular respiration;4.88100684963918e-08!GO:0048475;coated membrane;4.90497023908794e-08!GO:0030117;membrane coat;4.90497023908794e-08!GO:0003924;GTPase activity;5.51908221891312e-08!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.30074797903164e-08!GO:0042623;ATPase activity, coupled;7.21071993855641e-08!GO:0008654;phospholipid biosynthetic process;7.97398372803111e-08!GO:0006916;anti-apoptosis;9.157996592471e-08!GO:0016887;ATPase activity;1.0244632009156e-07!GO:0043067;regulation of programmed cell death;1.0329954256783e-07!GO:0007005;mitochondrion organization and biogenesis;1.14783962870984e-07!GO:0043066;negative regulation of apoptosis;1.1601517167002e-07!GO:0048523;negative regulation of cellular process;1.23712876286983e-07!GO:0031988;membrane-bound vesicle;1.34396820657587e-07!GO:0042981;regulation of apoptosis;1.47835896056741e-07!GO:0016023;cytoplasmic membrane-bound vesicle;1.52704484009213e-07!GO:0006399;tRNA metabolic process;1.63342321380106e-07!GO:0016787;hydrolase activity;1.84246277859029e-07!GO:0031982;vesicle;2.60367706380856e-07!GO:0017038;protein import;3.01454547715264e-07!GO:0006913;nucleocytoplasmic transport;3.51012837223792e-07!GO:0031410;cytoplasmic vesicle;3.73784025592712e-07!GO:0044453;nuclear membrane part;3.84799820845542e-07!GO:0005839;proteasome core complex (sensu Eukaryota);3.99199744637382e-07!GO:0003712;transcription cofactor activity;3.99199744637382e-07!GO:0005770;late endosome;5.07778819984124e-07!GO:0006259;DNA metabolic process;5.33796164886421e-07!GO:0051187;cofactor catabolic process;6.31516277090403e-07!GO:0051169;nuclear transport;6.45981660679242e-07!GO:0045454;cell redox homeostasis;7.30150679130001e-07!GO:0043687;post-translational protein modification;7.78885815173259e-07!GO:0009108;coenzyme biosynthetic process;7.79731430020342e-07!GO:0051246;regulation of protein metabolic process;8.26684805831296e-07!GO:0006099;tricarboxylic acid cycle;8.55029303281263e-07!GO:0046356;acetyl-CoA catabolic process;8.55029303281263e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.9573829607737e-07!GO:0044440;endosomal part;1.13500695555461e-06!GO:0010008;endosome membrane;1.13500695555461e-06!GO:0048519;negative regulation of biological process;1.21468343193849e-06!GO:0006084;acetyl-CoA metabolic process;1.22385156164876e-06!GO:0006364;rRNA processing;1.22385156164876e-06!GO:0030532;small nuclear ribonucleoprotein complex;1.50014081686535e-06!GO:0016072;rRNA metabolic process;1.61760678158863e-06!GO:0045259;proton-transporting ATP synthase complex;1.62444090399298e-06!GO:0016604;nuclear body;2.10628394226084e-06!GO:0006752;group transfer coenzyme metabolic process;2.41340165203002e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.56782681898083e-06!GO:0065002;intracellular protein transport across a membrane;2.59067716127234e-06!GO:0007049;cell cycle;2.77204814887309e-06!GO:0031252;leading edge;3.56435472116123e-06!GO:0009109;coenzyme catabolic process;3.66014059170474e-06!GO:0004298;threonine endopeptidase activity;3.70291967328781e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.83737494588045e-06!GO:0004812;aminoacyl-tRNA ligase activity;3.83737494588045e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.83737494588045e-06!GO:0051789;response to protein stimulus;3.83737494588045e-06!GO:0006986;response to unfolded protein;3.83737494588045e-06!GO:0005798;Golgi-associated vesicle;4.89142356002812e-06!GO:0016853;isomerase activity;5.33379353402006e-06!GO:0046474;glycerophospholipid biosynthetic process;5.45862563770625e-06!GO:0043038;amino acid activation;5.74593228929149e-06!GO:0006418;tRNA aminoacylation for protein translation;5.74593228929149e-06!GO:0043039;tRNA aminoacylation;5.74593228929149e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.58315624491215e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;6.79883374687028e-06!GO:0030554;adenyl nucleotide binding;7.73085916970331e-06!GO:0005762;mitochondrial large ribosomal subunit;8.83104326322628e-06!GO:0000315;organellar large ribosomal subunit;8.83104326322628e-06!GO:0016567;protein ubiquitination;8.87705833705367e-06!GO:0032446;protein modification by small protein conjugation;8.87705833705367e-06!GO:0032559;adenyl ribonucleotide binding;1.01881820169564e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.13343710556078e-05!GO:0015399;primary active transmembrane transporter activity;1.13343710556078e-05!GO:0005525;GTP binding;1.32388721463045e-05!GO:0005524;ATP binding;1.39394795767467e-05!GO:0005905;coated pit;2.35167699350095e-05!GO:0006613;cotranslational protein targeting to membrane;2.35167699350095e-05!GO:0005643;nuclear pore;2.59140475243859e-05!GO:0030867;rough endoplasmic reticulum membrane;3.17457951955308e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;3.44274485204822e-05!GO:0000074;regulation of progression through cell cycle;3.49552832257457e-05!GO:0051726;regulation of cell cycle;3.53753103703498e-05!GO:0044262;cellular carbohydrate metabolic process;4.21301592311829e-05!GO:0000151;ubiquitin ligase complex;4.21934460104796e-05!GO:0008361;regulation of cell size;4.28930261604943e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.51696993306939e-05!GO:0016607;nuclear speck;4.5217641330044e-05!GO:0016859;cis-trans isomerase activity;4.74641771772997e-05!GO:0033116;ER-Golgi intermediate compartment membrane;4.83322597208141e-05!GO:0031968;organelle outer membrane;5.24191923514538e-05!GO:0009165;nucleotide biosynthetic process;5.48359940093545e-05!GO:0015980;energy derivation by oxidation of organic compounds;5.66645059329153e-05!GO:0016049;cell growth;5.69755042292448e-05!GO:0000245;spliceosome assembly;6.91637599311919e-05!GO:0046489;phosphoinositide biosynthetic process;7.01322179972255e-05!GO:0019867;outer membrane;7.31649396385834e-05!GO:0046467;membrane lipid biosynthetic process;7.47437959685647e-05!GO:0008026;ATP-dependent helicase activity;7.48172380385075e-05!GO:0006650;glycerophospholipid metabolic process;8.05869290400063e-05!GO:0005791;rough endoplasmic reticulum;8.33777545265619e-05!GO:0006974;response to DNA damage stimulus;8.44917305616678e-05!GO:0000314;organellar small ribosomal subunit;9.36045517052041e-05!GO:0005763;mitochondrial small ribosomal subunit;9.36045517052041e-05!GO:0046930;pore complex;9.72059774680514e-05!GO:0016044;membrane organization and biogenesis;9.88531652796621e-05!GO:0032561;guanyl ribonucleotide binding;9.91620874073816e-05!GO:0019001;guanyl nucleotide binding;9.91620874073816e-05!GO:0003724;RNA helicase activity;0.000148549382163276!GO:0005048;signal sequence binding;0.000148549382163276!GO:0006839;mitochondrial transport;0.00014955019318757!GO:0043492;ATPase activity, coupled to movement of substances;0.00015150953124026!GO:0022402;cell cycle process;0.000160111902480442!GO:0045786;negative regulation of progression through cell cycle;0.000164707172976047!GO:0043021;ribonucleoprotein binding;0.000168593602240499!GO:0008610;lipid biosynthetic process;0.000168593602240499!GO:0043623;cellular protein complex assembly;0.000173125036311587!GO:0048471;perinuclear region of cytoplasm;0.000174284536099401!GO:0022890;inorganic cation transmembrane transporter activity;0.000174675771190328!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000174764983383609!GO:0016740;transferase activity;0.000175307617219454!GO:0005667;transcription factor complex;0.000198412016222318!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000210872388317782!GO:0006612;protein targeting to membrane;0.000216243139159537!GO:0030176;integral to endoplasmic reticulum membrane;0.00023357997417218!GO:0003697;single-stranded DNA binding;0.000240501678000599!GO:0004576;oligosaccharyl transferase activity;0.000244919530256656!GO:0001558;regulation of cell growth;0.000249583303721694!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000265025729663513!GO:0004386;helicase activity;0.00027556859705399!GO:0005769;early endosome;0.000285030112228691!GO:0008092;cytoskeletal protein binding;0.000285841784488715!GO:0051170;nuclear import;0.000290553141895199!GO:0008250;oligosaccharyl transferase complex;0.000293267593100273!GO:0006626;protein targeting to mitochondrion;0.000298143819473373!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000318879851005376!GO:0003714;transcription corepressor activity;0.000322963913185533!GO:0030133;transport vesicle;0.000328176746269158!GO:0043681;protein import into mitochondrion;0.000340707504376357!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000358522442215693!GO:0005741;mitochondrial outer membrane;0.000378075827968853!GO:0006606;protein import into nucleus;0.000411184515145481!GO:0030663;COPI coated vesicle membrane;0.000434259212238174!GO:0030126;COPI vesicle coat;0.000434259212238174!GO:0005885;Arp2/3 protein complex;0.000467815190919432!GO:0003899;DNA-directed RNA polymerase activity;0.000476415548413846!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000485401381646189!GO:0016779;nucleotidyltransferase activity;0.000582508801601202!GO:0018196;peptidyl-asparagine modification;0.00064221865428462!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00064221865428462!GO:0051920;peroxiredoxin activity;0.000684308057669237!GO:0043284;biopolymer biosynthetic process;0.000693789334680256!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000815357801683035!GO:0030137;COPI-coated vesicle;0.000825086405101512!GO:0019843;rRNA binding;0.000853836188026267!GO:0005774;vacuolar membrane;0.00087755796681256!GO:0006118;electron transport;0.000910520925376846!GO:0043566;structure-specific DNA binding;0.000980181102288029!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00111876455439096!GO:0006979;response to oxidative stress;0.00121594887132957!GO:0030118;clathrin coat;0.00124579055335102!GO:0006403;RNA localization;0.00126624706012414!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00127283838868694!GO:0065009;regulation of a molecular function;0.00129793174258431!GO:0050657;nucleic acid transport;0.00137935425695827!GO:0051236;establishment of RNA localization;0.00137935425695827!GO:0050658;RNA transport;0.00137935425695827!GO:0015992;proton transport;0.00139992930533464!GO:0030658;transport vesicle membrane;0.00147635302930114!GO:0030659;cytoplasmic vesicle membrane;0.00148162877573002!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00151376466007889!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00151376466007889!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00151376466007889!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00154013925918624!GO:0006818;hydrogen transport;0.00154599997080218!GO:0031902;late endosome membrane;0.00154599997080218!GO:0007006;mitochondrial membrane organization and biogenesis;0.00154979377393332!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00157491509048705!GO:0015002;heme-copper terminal oxidase activity;0.00157491509048705!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00157491509048705!GO:0004129;cytochrome-c oxidase activity;0.00157491509048705!GO:0006506;GPI anchor biosynthetic process;0.0015858221703485!GO:0006281;DNA repair;0.00161501782340258!GO:0065004;protein-DNA complex assembly;0.0017075180723434!GO:0030384;phosphoinositide metabolic process;0.00171491911935493!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.00183572282468542!GO:0006643;membrane lipid metabolic process;0.00193410177087493!GO:0045045;secretory pathway;0.00198929930291495!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.00201799289069224!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.00201799289069224!GO:0006414;translational elongation;0.00205716346617095!GO:0016126;sterol biosynthetic process;0.00207545980350956!GO:0009719;response to endogenous stimulus;0.00212358150767776!GO:0044437;vacuolar part;0.00229317045141319!GO:0030119;AP-type membrane coat adaptor complex;0.00231761963218002!GO:0007033;vacuole organization and biogenesis;0.00238063482040062!GO:0006505;GPI anchor metabolic process;0.00240067521435953!GO:0000278;mitotic cell cycle;0.00257658661816684!GO:0006497;protein amino acid lipidation;0.00258141301995768!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00260169944052054!GO:0007243;protein kinase cascade;0.00263559831622379!GO:0006383;transcription from RNA polymerase III promoter;0.00272615217510552!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00280275794165363!GO:0030660;Golgi-associated vesicle membrane;0.00300376726801959!GO:0008186;RNA-dependent ATPase activity;0.00303608314805669!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00303608314805669!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00303608314805669!GO:0007050;cell cycle arrest;0.00303608314805669!GO:0003713;transcription coactivator activity;0.00303669752594603!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00306191070705914!GO:0046519;sphingoid metabolic process;0.00308213373231585!GO:0046483;heterocycle metabolic process;0.00315757101802355!GO:0048500;signal recognition particle;0.00319027133014452!GO:0044433;cytoplasmic vesicle part;0.00324116596287961!GO:0007040;lysosome organization and biogenesis;0.00346993645605494!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0036320274761294!GO:0051427;hormone receptor binding;0.00369736138493966!GO:0030036;actin cytoskeleton organization and biogenesis;0.00374411375899439!GO:0006595;polyamine metabolic process;0.00386993853071722!GO:0001726;ruffle;0.00388924877573396!GO:0006778;porphyrin metabolic process;0.00394420987843359!GO:0033013;tetrapyrrole metabolic process;0.00394420987843359!GO:0006891;intra-Golgi vesicle-mediated transport;0.0040044462372822!GO:0003729;mRNA binding;0.00408179992942119!GO:0051252;regulation of RNA metabolic process;0.0042184683560723!GO:0006082;organic acid metabolic process;0.0042272778567348!GO:0030131;clathrin adaptor complex;0.0042404945715158!GO:0019752;carboxylic acid metabolic process;0.00429524016455003!GO:0005869;dynactin complex;0.00452809296906761!GO:0048468;cell development;0.00461628077799845!GO:0005777;peroxisome;0.0046882840670768!GO:0042579;microbody;0.0046882840670768!GO:0031418;L-ascorbic acid binding;0.0046882840670768!GO:0050662;coenzyme binding;0.00484912733240744!GO:0042168;heme metabolic process;0.0048515302797038!GO:0042158;lipoprotein biosynthetic process;0.00509914413876288!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.0051774003444302!GO:0012506;vesicle membrane;0.00537737446583289!GO:0030027;lamellipodium;0.00553197014926024!GO:0051087;chaperone binding;0.00578351074350515!GO:0006672;ceramide metabolic process;0.0058001252533139!GO:0048487;beta-tubulin binding;0.00580708204641922!GO:0016310;phosphorylation;0.00603239789385367!GO:0006897;endocytosis;0.0060721522879945!GO:0010324;membrane invagination;0.0060721522879945!GO:0006509;membrane protein ectodomain proteolysis;0.00612056887000371!GO:0033619;membrane protein proteolysis;0.00612056887000371!GO:0030134;ER to Golgi transport vesicle;0.00618235898886809!GO:0030880;RNA polymerase complex;0.00625518052831433!GO:0035257;nuclear hormone receptor binding;0.00632901793152776!GO:0006644;phospholipid metabolic process;0.00639987564711723!GO:0030132;clathrin coat of coated pit;0.00640616737557379!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00641315905770548!GO:0006007;glucose catabolic process;0.00643803704766779!GO:0008180;signalosome;0.00646218837507565!GO:0032940;secretion by cell;0.00651091985636492!GO:0031072;heat shock protein binding;0.00659161112958883!GO:0005765;lysosomal membrane;0.00660866461264101!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00660866461264101!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00660866461264101!GO:0045047;protein targeting to ER;0.00660866461264101!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00663653230920536!GO:0042802;identical protein binding;0.00667753952533077!GO:0004004;ATP-dependent RNA helicase activity;0.0066819926509733!GO:0030125;clathrin vesicle coat;0.0066819926509733!GO:0030665;clathrin coated vesicle membrane;0.0066819926509733!GO:0003746;translation elongation factor activity;0.00672514257693218!GO:0006366;transcription from RNA polymerase II promoter;0.00692300395958317!GO:0006793;phosphorus metabolic process;0.00696247940372359!GO:0006796;phosphate metabolic process;0.00696247940372359!GO:0019798;procollagen-proline dioxygenase activity;0.00733236801329372!GO:0030145;manganese ion binding;0.00736275668157505!GO:0006695;cholesterol biosynthetic process;0.00740892930594143!GO:0040008;regulation of growth;0.00749913597285218!GO:0008243;plasminogen activator activity;0.00769587252529008!GO:0016272;prefoldin complex;0.00787665104684825!GO:0051287;NAD binding;0.00817022869591622!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00866577415054519!GO:0017166;vinculin binding;0.00866577415054519!GO:0008312;7S RNA binding;0.00869299230375267!GO:0045792;negative regulation of cell size;0.00869299230375267!GO:0016408;C-acyltransferase activity;0.00881499229753696!GO:0031543;peptidyl-proline dioxygenase activity;0.00894987965571293!GO:0016564;transcription repressor activity;0.00917710495011078!GO:0005684;U2-dependent spliceosome;0.00917710495011078!GO:0051028;mRNA transport;0.00920683555432514!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00940566310886397!GO:0008632;apoptotic program;0.00948290212847046!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.00953285601038896!GO:0006740;NADPH regeneration;0.00968078700903817!GO:0006098;pentose-phosphate shunt;0.00968078700903817!GO:0044255;cellular lipid metabolic process;0.0102395609841302!GO:0016776;phosphotransferase activity, phosphate group as acceptor;0.0102992335442286!GO:0030308;negative regulation of cell growth;0.0103626494924428!GO:0008033;tRNA processing;0.0104646387096364!GO:0003711;transcription elongation regulator activity;0.0105298817925091!GO:0006790;sulfur metabolic process;0.0106502684916587!GO:0030029;actin filament-based process;0.0109806719726123!GO:0006323;DNA packaging;0.0110144240983912!GO:0004177;aminopeptidase activity;0.0112443280732503!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0115054670177255!GO:0030503;regulation of cell redox homeostasis;0.0116581211739703!GO:0031301;integral to organelle membrane;0.0119269201900788!GO:0009967;positive regulation of signal transduction;0.0123421084125791!GO:0051540;metal cluster binding;0.0125076413164697!GO:0051536;iron-sulfur cluster binding;0.0125076413164697!GO:0005862;muscle thin filament tropomyosin;0.0127030705464685!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.012757051809653!GO:0000428;DNA-directed RNA polymerase complex;0.012757051809653!GO:0043022;ribosome binding;0.0129704143732956!GO:0019899;enzyme binding;0.0131296158105958!GO:0030127;COPII vesicle coat;0.0131967179436084!GO:0012507;ER to Golgi transport vesicle membrane;0.0131967179436084!GO:0050811;GABA receptor binding;0.0137540796562914!GO:0007034;vacuolar transport;0.0141455943029727!GO:0006739;NADP metabolic process;0.0145508717181065!GO:0008047;enzyme activator activity;0.0145508717181065!GO:0005975;carbohydrate metabolic process;0.0146790767489472!GO:0006354;RNA elongation;0.0146790767489472!GO:0044452;nucleolar part;0.0147205019013569!GO:0008139;nuclear localization sequence binding;0.0148681329946722!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0149433020178392!GO:0043488;regulation of mRNA stability;0.0153572687151651!GO:0043487;regulation of RNA stability;0.0153572687151651!GO:0031227;intrinsic to endoplasmic reticulum membrane;0.0153572687151651!GO:0006260;DNA replication;0.0154611641154263!GO:0007010;cytoskeleton organization and biogenesis;0.0160591285655796!GO:0016568;chromatin modification;0.016337525462641!GO:0000030;mannosyltransferase activity;0.0166551772823276!GO:0007021;tubulin folding;0.0167700854190221!GO:0043433;negative regulation of transcription factor activity;0.0167700854190221!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0170757993910952!GO:0009116;nucleoside metabolic process;0.0176109591013352!GO:0015630;microtubule cytoskeleton;0.0176738551908625!GO:0007264;small GTPase mediated signal transduction;0.0181359969482321!GO:0030032;lamellipodium biogenesis;0.0187992573041796!GO:0016197;endosome transport;0.0189469147236854!GO:0019206;nucleoside kinase activity;0.0190867759353134!GO:0031901;early endosome membrane;0.0192912207623863!GO:0006984;ER-nuclear signaling pathway;0.0193175394566676!GO:0008320;protein transmembrane transporter activity;0.0196361289374903!GO:0006779;porphyrin biosynthetic process;0.0196369762923362!GO:0033014;tetrapyrrole biosynthetic process;0.0196369762923362!GO:0006352;transcription initiation;0.0198761195697822!GO:0006220;pyrimidine nucleotide metabolic process;0.0199309612637756!GO:0044438;microbody part;0.0199330924911291!GO:0044439;peroxisomal part;0.0199330924911291!GO:0051168;nuclear export;0.0205404318797988!GO:0005832;chaperonin-containing T-complex;0.0211950646383154!GO:0000096;sulfur amino acid metabolic process;0.021325887212308!GO:0000059;protein import into nucleus, docking;0.0215031542180492!GO:0003756;protein disulfide isomerase activity;0.0225223759651638!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0225223759651638!GO:0030984;kininogen binding;0.0230095786066887!GO:0004213;cathepsin B activity;0.0230095786066887!GO:0048522;positive regulation of cellular process;0.0231939562876197!GO:0016563;transcription activator activity;0.0234366745953053!GO:0031970;organelle envelope lumen;0.0234366745953053!GO:0000339;RNA cap binding;0.0239521456179365!GO:0006783;heme biosynthetic process;0.0248999118844717!GO:0006807;nitrogen compound metabolic process;0.0249892216175665!GO:0050790;regulation of catalytic activity;0.0250070155842595!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0251427864716336!GO:0031529;ruffle organization and biogenesis;0.0255411854406195!GO:0006635;fatty acid beta-oxidation;0.0260233602347401!GO:0008484;sulfuric ester hydrolase activity;0.0261620368251252!GO:0031124;mRNA 3'-end processing;0.0262197707186346!GO:0006402;mRNA catabolic process;0.0280616681638352!GO:0033673;negative regulation of kinase activity;0.0284984883403998!GO:0006469;negative regulation of protein kinase activity;0.0284984883403998!GO:0051329;interphase of mitotic cell cycle;0.0285757489593177!GO:0008022;protein C-terminus binding;0.0285763251191544!GO:0005758;mitochondrial intermembrane space;0.0287259545857869!GO:0005813;centrosome;0.0287259545857869!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0294032405957866!GO:0006333;chromatin assembly or disassembly;0.0295483462874734!GO:0035035;histone acetyltransferase binding;0.0295617416532455!GO:0003923;GPI-anchor transamidase activity;0.0295617416532455!GO:0016255;attachment of GPI anchor to protein;0.0295617416532455!GO:0042765;GPI-anchor transamidase complex;0.0295617416532455!GO:0000287;magnesium ion binding;0.0299027777123773!GO:0030100;regulation of endocytosis;0.0302836488463517!GO:0031903;microbody membrane;0.0308688678740165!GO:0005778;peroxisomal membrane;0.0308688678740165!GO:0007041;lysosomal transport;0.0315855564100968!GO:0031324;negative regulation of cellular metabolic process;0.0316029510270661!GO:0030913;paranodal junction assembly;0.031733722400264!GO:0032288;myelin formation;0.031733722400264!GO:0051101;regulation of DNA binding;0.0317453098187519!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0317453098187519!GO:0008147;structural constituent of bone;0.0318622398098353!GO:0022406;membrane docking;0.0328668110438782!GO:0048278;vesicle docking;0.0328668110438782!GO:0009218;pyrimidine ribonucleotide metabolic process;0.0331908861219264!GO:0051539;4 iron, 4 sulfur cluster binding;0.0331908861219264!GO:0006904;vesicle docking during exocytosis;0.0335925849090742!GO:0006596;polyamine biosynthetic process;0.0344495478964598!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0350174615551131!GO:0033043;regulation of organelle organization and biogenesis;0.0350174615551131!GO:0030031;cell projection biogenesis;0.0352215250649521!GO:0048144;fibroblast proliferation;0.0355074043879396!GO:0048145;regulation of fibroblast proliferation;0.0355074043879396!GO:0030508;thiol-disulfide exchange intermediate activity;0.0355718449629559!GO:0003779;actin binding;0.0355718449629559!GO:0045926;negative regulation of growth;0.0356538875524572!GO:0000209;protein polyubiquitination;0.0363122425836176!GO:0030149;sphingolipid catabolic process;0.0372842246221924!GO:0003676;nucleic acid binding;0.03733226095588!GO:0004197;cysteine-type endopeptidase activity;0.0374146365249991!GO:0008154;actin polymerization and/or depolymerization;0.0378430021332524!GO:0031625;ubiquitin protein ligase binding;0.0378430021332524!GO:0006629;lipid metabolic process;0.0378928421769527!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0380289375710723!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0380289375710723!GO:0015631;tubulin binding;0.0381655722926143!GO:0035258;steroid hormone receptor binding;0.0383015553643747!GO:0008538;proteasome activator activity;0.0386527340947256!GO:0051128;regulation of cellular component organization and biogenesis;0.0386576332991057!GO:0006401;RNA catabolic process;0.0402016122021216!GO:0051098;regulation of binding;0.0402016122021216!GO:0016860;intramolecular oxidoreductase activity;0.0403672181571029!GO:0001527;microfibril;0.0411597947948154!GO:0030911;TPR domain binding;0.0412005786471943!GO:0006892;post-Golgi vesicle-mediated transport;0.0412534579019371!GO:0008475;procollagen-lysine 5-dioxygenase activity;0.0413810313075229!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0418956325727755!GO:0030433;ER-associated protein catabolic process;0.0419053973875486!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0419053973875486!GO:0046365;monosaccharide catabolic process;0.0423541710977341!GO:0008287;protein serine/threonine phosphatase complex;0.0425007578808139!GO:0004448;isocitrate dehydrogenase activity;0.0428272162021374!GO:0046039;GTP metabolic process;0.0428412357695477!GO:0006183;GTP biosynthetic process;0.0428412357695477!GO:0018193;peptidyl-amino acid modification;0.0433661255862768!GO:0006096;glycolysis;0.0435558539762256!GO:0030833;regulation of actin filament polymerization;0.0435558539762256!GO:0051348;negative regulation of transferase activity;0.0436602819346808!GO:0051325;interphase;0.0437363248070008!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0437363248070008!GO:0008601;protein phosphatase type 2A regulator activity;0.0437363248070008!GO:0006914;autophagy;0.0439806453335324!GO:0006769;nicotinamide metabolic process;0.0454472323309399!GO:0031371;ubiquitin conjugating enzyme complex;0.0455158814025601!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0456897601925604!GO:0006458;'de novo' protein folding;0.0457086359893851!GO:0051084;'de novo' posttranslational protein folding;0.0457086359893851!GO:0022408;negative regulation of cell-cell adhesion;0.0467815891015387!GO:0006733;oxidoreduction coenzyme metabolic process;0.0471460525955252!GO:0009220;pyrimidine ribonucleotide biosynthetic process;0.0481251141509822!GO:0006767;water-soluble vitamin metabolic process;0.0483857443308476!GO:0009303;rRNA transcription;0.0483857443308476!GO:0007030;Golgi organization and biogenesis;0.0494926878655699
 |sample_id=10570
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=uterus
 |top_motifs=HSF1,2:2.13537874896;UFEwm:1.7303270437;GZF1:1.72925382988;ZBTB6:1.65354804226;NFE2L1:1.64214295529;EN1,2:1.61636135464;HOXA9_MEIS1:1.60213161544;NKX3-1:1.55917387126;KLF4:1.51446732881;NR1H4:1.5098598341;RXRA_VDR{dimer}:1.45154535197;ESR1:1.45118260336;PAX6:1.43330636545;NKX2-2,8:1.38033200035;ALX4:1.33244816191;HES1:1.30360665103;ATF6:1.29340905921;HMX1:1.2196113195;SMAD1..7,9:1.20305055536;HOX{A4,D4}:1.20181633657;POU6F1:1.15613633373;GLI1..3:1.11359550222;SRF:1.07345074951;RXR{A,B,G}:1.03625159142;HOX{A5,B5}:0.98667892565;ZNF238:0.959863762639;GCM1,2:0.957685534242;CRX:0.916804863685;IKZF1:0.916040324685;HIF1A:0.891741580424;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.885091088955;TLX1..3_NFIC{dimer}:0.875102587992;TFAP4:0.865180326074;NR3C1:0.84815225905;ESRRA:0.837247070889;TBX4,5:0.830877160127;SPZ1:0.830252388924;TFCP2:0.81313806192;TEAD1:0.801414017647;TP53:0.798228594474;XBP1:0.777887232222;ZIC1..3:0.771753668371;CDC5L:0.720871090875;HOX{A6,A7,B6,B7}:0.719554546473;ARID5B:0.718293006483;TBP:0.714440163787;GFI1B:0.691692900246;NKX3-2:0.656634222008;MAFB:0.652322184947;NFE2L2:0.61036121084;POU3F1..4:0.568128396097;PPARG:0.566401324659;NR5A1,2:0.493590518271;TAL1_TCF{3,4,12}:0.455438242398;MYBL2:0.443626874684;HMGA1,2:0.430345886901;NFATC1..3:0.417954371008;ONECUT1,2:0.403353825321;MYFfamily:0.397080988074;AIRE:0.367899275781;YY1:0.351596412906;PAX5:0.309557500779;EBF1:0.289380679173;NFIX:0.280476130304;FOSL2:0.279302862764;FOX{I1,J2}:0.253437972217;PRDM1:0.211267304728;HAND1,2:0.199427984593;AR:0.19266164985;GTF2I:0.1906451971;BACH2:0.187190686133;ELK1,4_GABP{A,B1}:0.174142966796;HLF:0.171135208257;GTF2A1,2:0.169214534474;FOS_FOS{B,L1}_JUN{B,D}:0.156347725444;PAX4:0.120264220664;bHLH_family:0.0871568853987;EVI1:0.0869341425883;MTE{core}:0.0498129191781;CDX1,2,4:0.0458376530776;HIC1:0.0357899537035;PAX3,7:0.0323050629106;NR6A1:0.0303497359759;GATA4:0.0277278741641;JUN:-0.037669232998;FOXL1:-0.0645323235196;SOX17:-0.0664034650809;HNF1A:-0.0684607746165;PAX2:-0.104649828449;NKX2-1,4:-0.10892554048;NFE2:-0.118874365146;TFAP2{A,C}:-0.121229587816;STAT5{A,B}:-0.1332813795;LMO2:-0.139373602972;FOXD3:-0.159865631353;MYOD1:-0.185694979118;LEF1_TCF7_TCF7L1,2:-0.185951271801;RFX1:-0.192542551875;SREBF1,2:-0.21337858962;MEF2{A,B,C,D}:-0.244963600402;ZNF148:-0.247478914449;REST:-0.253080407398;HNF4A_NR2F1,2:-0.254348745199;MZF1:-0.262066810241;SOX2:-0.26480876224;STAT2,4,6:-0.275326389665;TFAP2B:-0.282569081005;LHX3,4:-0.333332359598;NHLH1,2:-0.337732589004;RFX2..5_RFXANK_RFXAP:-0.355495884822;ZBTB16:-0.359727968159;SNAI1..3:-0.363494175254;MAZ:-0.37074754173;TEF:-0.389494423602;DMAP1_NCOR{1,2}_SMARC:-0.389956348588;CEBPA,B_DDIT3:-0.393731355906;NRF1:-0.40928288166;T:-0.43691538281;ALX1:-0.447201024084;FOXP3:-0.456683709037;NANOG{mouse}:-0.463951545041;ZNF384:-0.468813993352;SP1:-0.478189616314;DBP:-0.484010395852;IRF1,2:-0.48682085637;XCPE1{core}:-0.495042261139;FOXM1:-0.496394420701;NFKB1_REL_RELA:-0.520371588968;ZNF423:-0.522387029899;MTF1:-0.523683646362;ETS1,2:-0.537827429668;FOXN1:-0.546671464129;SPIB:-0.55980314733;OCT4_SOX2{dimer}:-0.560641058683;IRF7:-0.579939357617;SPI1:-0.589016486916;RUNX1..3:-0.594275130491;FOX{D1,D2}:-0.595244044207;ZEB1:-0.606335530284;SOX5:-0.610912207537;GFI1:-0.621347628888;AHR_ARNT_ARNT2:-0.627022781242;RREB1:-0.637138412619;TOPORS:-0.641546789705;PAX1,9:-0.653522631772;ADNP_IRX_SIX_ZHX:-0.693477281525;TLX2:-0.701014408572;TGIF1:-0.703692494452;PATZ1:-0.717048027647;PRRX1,2:-0.718341881697;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.745856518227;PAX8:-0.771938386816;NKX2-3_NKX2-5:-0.785986426688;EGR1..3:-0.792474318922;MED-1{core}:-0.810791268943;CREB1:-0.817776025562;PBX1:-0.828075759804;PDX1:-0.828696969761;NANOG:-0.856769245185;NFIL3:-0.857116330416;ELF1,2,4:-0.86272466833;ZNF143:-0.863674971923;ATF5_CREB3:-0.866932529691;POU1F1:-0.909446264964;GATA6:-0.925130246285;ZFP161:-0.975051717357;RORA:-0.984710440203;FOXO1,3,4:-0.992421539568;NKX6-1,2:-0.995820670705;ATF2:-1.00632575569;MYB:-1.0974729912;POU5F1:-1.14393762419;CUX2:-1.20097599899;VSX1,2:-1.26720653696;FOX{F1,F2,J1}:-1.26984288024;E2F1..5:-1.28304624368;EP300:-1.2912787268;FOXP1:-1.32760144615;IKZF2:-1.33092149183;FOXQ1:-1.3343177507;SOX{8,9,10}:-1.34047619678;HBP1_HMGB_SSRP1_UBTF:-1.34494454437;PITX1..3:-1.47144708277;RBPJ:-1.48349503961;STAT1,3:-1.57474677276;NFY{A,B,C}:-1.58726145709;POU2F1..3:-1.68789807236;FOXA2:-1.70366436377;ATF4:-1.80370792396;TFDP1:-1.81509134777;BPTF:-1.85773850953;BREu{core}:-2.17734883539
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10570-108B3;search_select_hide=table117:FF:10570-108B3
 }}

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FF:10570-108B3: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 14:29, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0