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{{f5samples
{{f5samples
|id=FF:11554-120C6
|DRA_sample_Accession=CAGE@SAMD00005209
|name=Fibroblast - skin walker warburg, donor1
|accession_numbers=CAGE;DRX008292;DRR009164;DRZ000589;DRZ001974;DRZ011939;DRZ013324
|sample_id=11554
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0002097,UBERON:0002199,UBERON:0002384,UBERON:0000479,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003102,UBERON:0002416
|rna_tube_id=120C6
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0002320,CL:0002371,CL:0000255,CL:0000057,CL:0002620
|rna_box=120
|rna_position=C6
|sample_cell_lot=GM16192
|sample_cell_catalog=N/A
|sample_company=Coriell
|rna_lot_number=
|rna_catalog_number=custom
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=skin
|sample_donor(cell lot)=
|sample_sex=M
|sample_age=1 month old neonate
|sample_ethnicity=C
|rna_rin=
|rna_od260/230=2.1
|rna_od260/280=2.11
|sample_cell_type=fibroblast
|sample_cell_line=
|sample_collaboration=Splicing (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=WALKER-WARBURG SYNDROME
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=158.94225
|rna_concentration=1.177
|sample_note=
|profile_hcage=CNhs11352,LSID769,release014,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000048,CL:0000055,CL:0000057,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000723,CL:0002320,CL:0002371,CL:0002620
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0001062,UBERON:0002097,UBERON:0002199,UBERON:0002384,UBERON:0002416,UBERON:0003102
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000057,FF:0000250,FF:0000001,FF:0000252
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr9:132427883..132427951,+!p2@PRRX2!1.99!96.14!PRRX2;;chr9:132427972..132428056,+!p1@PRRX2!1.72!65.79!PRRX2;;chr1:197886461..197886558,+!p1@LHX9!1.70!49.17!LHX9;;chr7:19157248..19157268,-!p1@TWIST1!1.57!97.33!TWIST1;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.45!26.96!HOXC5;;chr6:10415276..10415341,-!p2@TFAP2A!1.43!31.37!TFAP2A;;chr11:46299199..46299233,+!p1@CREB3L1!1.38!115.81!CREB3L1;;chr1:170633348..170633399,+!p2@PRRX1!1.38!30.86!PRRX1;;chr1:170632285..170632309,+!p1@PRRX1!1.32!22.55!PRRX1;;chr6:134210243..134210257,+!p1@TCF21!1.30!18.99!TCF21;;chr4:81118647..81118666,+!p1@PRDM8!1.26!22.89!PRDM8;;chr6:1389789..1389821,+!p1@FOXF2!1.24!22.38!FOXF2;;chr2:239756739..239756755,+!p2@TWIST2!1.21!25.94!TWIST2;;chr6:10412600..10412637,-!p1@TFAP2A!1.20!24.93!TFAP2A;;chr15:57511609..57511651,+!p2@TCF12!1.20!24.76!TCF12;;chr2:239756671..239756732,+!p1@TWIST2!1.19!46.29!TWIST2;;chr7:27224842..27224872,-!p1@HOXA11!1.19!14.58!HOXA11;;chr7:27224795..27224840,-!p2@HOXA11!1.18!14.07!HOXA11;;chr10:28034739..28034756,-!p1@MKX!1.07!10.85!MKX;;chr3:128206762..128206781,-!p2@GATA2!1.06!65.62!GATA2;;chr11:65686802..65686818,+!p6@DRAP1!1.03!17.13!DRAP1;;chr5:72744594..72744609,-!p1@FOXD1!1.02!43.75!FOXD1;;chr2:176969228..176969260,+!p1@HOXD11!1.02!9.50!HOXD11;;chr12:54380404..54380433,+!p3@HOXC10!1.01!9.16!HOXC10;;chr5:321810..321877,+!p1@AHRR!0.99!28.83!AHRR;;chr11:65686732..65686756,+!p2@DRAP1!0.98!36.96!DRAP1;;chr11:46299539..46299620,+!p2@CREB3L1!0.97!14.24!CREB3L1;;chr5:72744445..72744466,-!p2@FOXD1!0.95!13.40!FOXD1;;chr3:128212033..128212051,-!p1@GATA2!0.94!7.63!GATA2;;chr5:139492456..139492489,+!p7@PURA!0.91!7.12!PURA;;chr7:27213893..27213954,-!p1@HOXA10!0.91!7.12!HOXA10;;chr1:23885981..23886002,-!p1@ID3!0.90!1272.04!ID3;;chr12:53614115..53614154,-!p1@RARG!0.89!38.32!RARG;;chr16:86544113..86544145,+!p1@FOXF1!0.89!8.48!FOXF1;;chr2:223163706..223163730,-!p1@PAX3!0.89!6.78!PAX3;;chr5:2751762..2751784,-!p1@IRX2!0.89!6.78!IRX2;;chr17:59477233..59477263,+!p1@TBX2!0.88!21.20!TBX2;;chr2:19558373..19558392,-!p1@OSR1!0.88!18.99!OSR1;;chr10:119303078..119303169,+!p2@EMX2!0.88!6.61!EMX2;;chr16:86600426..86600441,+!p1@FOXC2!0.87!16.62!FOXC2;;chr3:157823517..157823562,-!p1@SHOX2!0.86!6.78!SHOX2;;chr4:174450089..174450153,-!p2@HAND2!0.85!6.10!HAND2;;chrY:21906594..21906622,-!p1@KDM5D!0.84!5.93!KDM5D;;chr6:34204921..34204939,+!p3@HMGA1!0.83!186.01!HMGA1;;chr1:170632959..170632987,+!p4@PRRX1!0.83!6.44!PRRX1;;chr10:63809106..63809127,+!p1@ARID5B!0.82!82.07!ARID5B;;chr11:65687362..65687436,+!p3@DRAP1!0.82!27.64!DRAP1;;chr12:115121962..115121987,-!p1@TBX3!0.81!49.85!TBX3;;chr14:61116183..61116208,-!p1@SIX1!0.81!22.38!SIX1;;chr2:66662281..66662308,+!p1@MEIS1!0.81!20.01!MEIS1;;chr2:85981107..85981120,+!p3@ATOH8!0.81!5.43!ATOH8;;chr16:31076332..31076388,-!p3@ZNF668!0.81!5.43!ZNF668;;chr12:54378923..54378966,+!p1@HOXC10!0.81!5.43!HOXC10;;chr10:63809013..63809041,+!p3@ARID5B!0.80!31.54!ARID5B;;chr12:54380036..54380091,+!p4@HOXC10!0.80!5.26!HOXC10;;chr19:13134772..13134822,+!p2@NFIX!0.79!7.80!NFIX;;chr11:65687222..65687240,+!p7@DRAP1!0.79!6.78!DRAP1;;chr6:85473156..85473210,-!p2@TBX18!0.79!6.44!TBX18;;chr7:44143925..44143970,+!p1@AEBP1!0.78!121.91!AEBP1;;chr2:85980951..85981004,+!p1@ATOH8!0.78!8.48!ATOH8;;chr1:170633262..170633285,+!p3@PRRX1!0.78!5.77!PRRX1;;chr7:27239703..27239715,-!p1@HOXA13!0.78!5.09!HOXA13;;chr12:114845810..114845824,-!p1@TBX5!0.78!5.09!TBX5;;chr12:54379029..54379057,+!p2@HOXC10!0.78!5.09!HOXC10;;chr12:66218255..66218304,+!p3@HMGA2!0.77!14.24!HMGA2;;chr3:141121847..141121868,+!p5@ZBTB38!0.77!7.80!ZBTB38;;chr20:30193083..30193098,+!p1@ID1!0.76!423.22!ID1;;chr11:65686952..65686975,+!p5@DRAP1!0.75!27.98!DRAP1;;chr6:10412392..10412409,-!p4@TFAP2A!0.75!5.43!TFAP2A;;chr12:54393880..54393962,+!p1@HOXC9!0.75!4.58!HOXC9;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.75!4.58!HOXC5;;chr19:47523058..47523114,+!p1@NPAS1!0.75!4.58!NPAS1;;chr1:170632250..170632277,+!p7@PRRX1!0.75!4.58!PRRX1;;chr16:51185172..51185197,-!p1@SALL1!0.75!4.58!SALL1;;chr8:67525443..67525459,-!p2@MYBL1!0.74!6.95!MYBL1;;chr5:72743793..72743855,-!p4@FOXD1!0.74!5.43!FOXD1;;chr15:76629123..76629151,+!p1@ISL2!0.74!5.09!ISL2;;chr11:65687243..65687276,+!p8@DRAP1!0.73!6.10!DRAP1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.73!4.41!RUNX1T1;;chr2:172967242..172967265,-!p2@DLX2!0.73!4.41!DLX2;;chr4:174451370..174451387,-!p1@HAND2!0.73!4.41!HAND2;;chr6:19837592..19837621,+!p1@ID4!0.72!29.16!ID4;;chr2:121493425..121493474,+!p1@GLI2!0.72!10.17!GLI2;;chr7:27205136..27205164,-!p1@HOXA9!0.72!4.24!HOXA9;;chr20:55204351..55204377,+!p1@TFAP2C!0.71!5.43!TFAP2C;;chr5:134369905..134369972,-!p1@PITX1!0.70!6.44!PITX1;;chr8:93074803..93074845,-!p1@RUNX1T1!0.70!4.07!RUNX1T1;;chrY:2803415..2803468,+!p1@ZFY!0.70!4.07!ZFY;;chr1:170633058..170633084,+!p5@PRRX1!0.70!4.07!PRRX1;;chr15:83953397..83953425,-!p1@BNC1!0.69!4.58!BNC1;;chr6:100912752..100912778,-!p2@SIM1!0.69!3.90!SIM1;;chr7:27205106..27205134,-!p2@HOXA9!0.69!3.90!HOXA9;;chr7:27239740..27239759,-!p2@HOXA13!0.69!3.90!HOXA13;;chr2:176969179..176969226,+!p2@HOXD11!0.69!3.90!HOXD11;;chr12:124873357..124873401,-!p1@NCOR2!0.68!50.70!NCOR2;;chr12:66218598..66218645,+!p2@HMGA2!0.67!19.33!HMGA2;;chr2:172967621..172967637,-!p1@DLX2!0.67!11.02!DLX2;;chr2:85981222..85981259,+!p2@ATOH8!0.67!6.44!ATOH8;;chr6:100912785..100912822,-!p1@SIM1!0.67!3.73!SIM1;;chr8:49833978..49833996,-!p1@SNAI2!0.66!85.63!SNAI2;;chr1:209979467..209979494,-!p1@IRF6!0.66!4.07!IRF6;;chr1:170632723..170632739,+!p8@PRRX1!0.66!3.56!PRRX1;;chr2:5832508..5832524,+!p1@SOX11!0.66!3.56!SOX11;;chr2:85981073..85981091,+!p5@ATOH8!0.66!3.56!ATOH8;;chr18:52969674..52969685,-!p24@TCF4!0.66!3.56!TCF4;;chr3:52001448..52001478,-!p2@PCBP4!0.65!56.80!PCBP4;;chr8:49833948..49833973,-!p2@SNAI2!0.65!25.26!SNAI2;;chr15:37392724..37392757,-!p1@MEIS2!0.65!18.48!MEIS2;;chr14:24837368..24837401,+!p1@NFATC4!0.64!8.82!NFATC4;;chr15:96869255..96869291,+!p6@NR2F2!0.64!6.61!NR2F2;;chr15:37392703..37392717,-!p8@MEIS2!0.64!5.09!MEIS2;;chr12:114843940..114843955,-!p2@TBX5!0.64!3.39!TBX5;;chr1:119530493..119530572,-!p1@TBX15!0.64!3.39!TBX15;;chr2:172949484..172949522,+!p1@DLX1!0.64!3.39!DLX1;;chr6:85474299..85474324,-!p1@TBX18!0.63!6.44!TBX18;;chr8:99956662..99956684,+!p1@OSR2!0.63!5.43!OSR2;;chr5:72744562..72744573,-!p3@FOXD1!0.63!4.24!FOXD1;;chr15:96869292..96869320,+!p15@NR2F2!0.61!4.75!NR2F2;;chr6:1389824..1389840,+!p3@FOXF2!0.61!3.05!FOXF2;;chr1:197886421..197886432,+!p2@LHX9!0.61!3.05!LHX9;;chr10:63809077..63809089,+!p5@ARID5B!0.60!7.29!ARID5B;;chr12:115122005..115122016,-!p3@TBX3!0.60!3.73!TBX3;;chr2:66662249..66662267,+!p2@MEIS1!0.59!13.23!MEIS1;;chr12:80085061..80085119,-!p6@PAWR!0.59!5.09!PAWR;;chr18:53068911..53068935,-!p4@TCF4!0.59!3.39!TCF4;;chr11:46299443..46299459,+!p4@CREB3L1!0.59!2.88!CREB3L1;;chr6:10412576..10412599,-!p5@TFAP2A!0.59!2.88!TFAP2A;;chr18:56532100..56532130,+!p1@ZNF532!0.58!5.77!ZNF532;;chr15:37390850..37390909,-!p3@MEIS2!0.57!6.10!MEIS2;;chr17:59477275..59477286,+!p3@TBX2!0.57!3.90!TBX2;;chr5:43067636..43067674,+!p6@ZNF131!0.57!3.90!ZNF131;;chr19:45260775..45260838,+!p5@BCL3!0.57!3.73!BCL3;;chr1:110613238..110613272,-!p1@ALX3!0.57!2.71!ALX3;;chr1:170632115..170632136,+!p9@PRRX1!0.57!2.71!PRRX1;;chr1:170632137..170632172,+!p10@PRRX1!0.57!2.71!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.57!2.71!PRRX1;;chr16:86612320..86612394,+!p1@FOXL1!0.57!2.71!FOXL1;;chr4:4861385..4861398,+!p1@MSX1!0.56!9.16!MSX1;;chr3:52001426..52001447,-!p3@PCBP4!0.55!8.65!PCBP4;;chr7:19157043..19157088,-!p2@TWIST1!0.55!7.46!TWIST1;;chr7:1577899..1577943,+!p3@MAFK!0.55!2.54!MAFK;;chr2:172950227..172950249,+!p2@DLX1!0.55!2.54!DLX1;;chr2:176969097..176969109,+!p3@HOXD11!0.55!2.54!HOXD11;;chr2:85981008..85981025,+!p7@ATOH8!0.55!2.54!ATOH8;;chr3:128207349..128207386,-!p3@GATA2!0.55!2.54!GATA2;;chr15:96869165..96869183,+!p20@NR2F2!0.55!2.54!NR2F2;;chr15:66994561..66994597,+!p2@SMAD6!0.54!6.95!SMAD6;;chr2:71127699..71127744,+!p1@VAX2!0.54!5.93!VAX2;;chr10:63809090..63809097,+!p7@ARID5B!0.54!3.73!ARID5B;;chr1:54204818..54204870,-!p@chr1:54204818..54204870,-!0.54!2.71!GLIS1;;chr2:85980919..85980942,+!p4@ATOH8!0.54!2.71!ATOH8;;chr11:65667884..65667895,-!p2@FOSL1!0.53!11.53!FOSL1;;chr11:46316699..46316719,+!p10@CREB3L1!0.53!2.37!CREB3L1;;chr12:54366975..54367001,+!p1@HOXC11!0.53!2.37!HOXC11;;chr12:54394309..54394336,+!p2@HOXC9!0.53!2.37!HOXC9;;chr2:176969124..176969155,+!p5@HOXD11!0.53!2.37!HOXD11;;chr2:85981027..85981047,+!p8@ATOH8!0.53!2.37!ATOH8;;chr6:1389989..1390019,+!p2@FOXF2!0.53!2.37!FOXF2;;chr19:12203100..12203132,+!p1@ZNF788!0.52!5.43!ZNF788;;chr12:66218183..66218209,+!p4@HMGA2!0.52!5.09!HMGA2;;chr7:44143978..44143989,+!p2@AEBP1!0.52!4.92!AEBP1;;chr12:66218212..66218244,+!p5@HMGA2!0.52!3.73!HMGA2;;chr20:42295745..42295765,+!p1@MYBL2!0.51!47.82!MYBL2;;chr15:96874012..96874042,+!p2@NR2F2!0.51!25.94!NR2F2;;chr11:65687158..65687216,+!p4@DRAP1!0.51!16.45!DRAP1;;chr16:54964740..54964789,+!p1@IRX5!0.51!3.56!IRX5;;chr11:12696071..12696086,+!p3@TEAD1!0.51!3.22!TEAD1;;chr9:16870659..16870675,-!p2@BNC2!0.51!2.88!BNC2;;chr15:37392534..37392562,-!p10@MEIS2!0.51!2.54!MEIS2;;chr15:80843484..80843499,+!p5@ARNT2!0.51!2.20!ARNT2;;chr2:66662396..66662407,+!p4@MEIS1!0.51!2.20!MEIS1;;chr9:16705069..16705086,-!p3@BNC2!0.51!2.20!BNC2;;chr12:115122318..115122331,-!p2@TBX3!0.51!2.20!TBX3;;chr5:176738887..176738934,-!p1@MXD3!0.50!18.82!MXD3;;chr18:72922743..72922761,+!p3@TSHZ1!0.50!8.82!TSHZ1;;chr15:66994663..66994680,+!p1@SMAD6!0.50!6.27!SMAD6;;chr12:66218836..66218888,+!p1@HMGA2!0.49!26.11!HMGA2;;chr12:2986206..2986258,-!p2@FOXM1!0.49!16.45!FOXM1;;chr4:1873011..1873063,+!p2@WHSC1!0.49!8.99!WHSC1;;chr20:42543506..42543549,+!p2@TOX2!0.49!6.10!TOX2;;chr6:1312325..1312340,+!p1@FOXQ1!0.49!3.90!FOXQ1;;chr20:62680984..62680999,-!p1@SOX18!0.49!3.05!SOX18;;chr7:44143997..44144008,+!p3@AEBP1!0.49!2.88!AEBP1;;chr6:31126291..31126399,+!p1@TCF19!0.48!25.43!TCF19;;chr12:124873852..124873881,-!p3@NCOR2!0.48!15.94!NCOR2;;chr10:63853436..63853442,+!p4@ARID5B!0.48!14.24!ARID5B;;chr2:121493492..121493537,+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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000057;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002620;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002097;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002416
|ffid_belonging_in_development=CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 66: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|comment=
|created_by=
|creation_date=
|def=
|has_quality=
|has_quality=
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|name=Fibroblast - skin walker warburg, donor1
|namespace=FANTOM5
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|rna_box=120
|rna_catalog_number=custom
|rna_concentration=1.177
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=
|rna_od260/230=2.1
|rna_od260/280=2.11
|rna_position=C6
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=120C6
|rna_weight_ug=158.94225
|sample_age=1 month old neonate
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=GM16192
|sample_cell_type=fibroblast
|sample_collaboration=Splicing (contact: Al Forrest)
|sample_company=Coriell
|sample_description=
|sample_dev_stage=
|sample_disease=WALKER-WARBURG SYNDROME
|sample_donor(cell lot)=
|sample_ethnicity=C
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.19079711974056e-247!GO:0043226;organelle;8.55689686561623e-200!GO:0043229;intracellular organelle;1.50885663118221e-199!GO:0043231;intracellular membrane-bound organelle;1.72544435953666e-194!GO:0043227;membrane-bound organelle;4.3154164797508e-194!GO:0005737;cytoplasm;1.89127059586915e-188!GO:0044422;organelle part;3.03006205922719e-150!GO:0044446;intracellular organelle part;6.50247113633451e-149!GO:0044444;cytoplasmic part;1.93330748801808e-132!GO:0032991;macromolecular complex;1.59574685800906e-103!GO:0030529;ribonucleoprotein complex;3.13607717897891e-89!GO:0044238;primary metabolic process;1.74348631216685e-87!GO:0044237;cellular metabolic process;5.52219945436862e-87!GO:0043170;macromolecule metabolic process;1.8595381893054e-84!GO:0005515;protein binding;2.53279054107066e-84!GO:0005634;nucleus;5.87423256250505e-80!GO:0043233;organelle lumen;1.21018079109314e-74!GO:0031974;membrane-enclosed lumen;1.21018079109314e-74!GO:0044428;nuclear part;1.06103443958568e-73!GO:0003723;RNA binding;1.08637031417579e-68!GO:0005739;mitochondrion;2.74072691292967e-66!GO:0016043;cellular component organization and biogenesis;2.99797215796791e-55!GO:0005840;ribosome;6.14263569283948e-54!GO:0043234;protein complex;5.22050343369975e-52!GO:0006412;translation;1.52238580353316e-50!GO:0019538;protein metabolic process;1.12349677757541e-49!GO:0006396;RNA processing;7.69972722169896e-48!GO:0003735;structural constituent of ribosome;8.58330456589125e-48!GO:0031090;organelle membrane;3.06396909373234e-47!GO:0043283;biopolymer metabolic process;4.46111218528803e-46!GO:0031981;nuclear lumen;1.59713847875248e-44!GO:0044429;mitochondrial part;2.08902364418108e-44!GO:0044260;cellular macromolecule metabolic process;7.01034155512992e-44!GO:0015031;protein transport;1.39417553562796e-43!GO:0033036;macromolecule localization;2.42482453499761e-43!GO:0044267;cellular protein metabolic process;3.73970519723021e-43!GO:0010467;gene expression;6.42544896043983e-42!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.89234225249778e-40!GO:0033279;ribosomal subunit;1.92108869429034e-40!GO:0008104;protein localization;4.2007554373249e-40!GO:0045184;establishment of protein localization;7.81883356332675e-40!GO:0005829;cytosol;8.96655071610118e-40!GO:0043228;non-membrane-bound organelle;1.92973575724948e-39!GO:0043232;intracellular non-membrane-bound organelle;1.92973575724948e-39!GO:0031967;organelle envelope;1.24856428034818e-38!GO:0044249;cellular biosynthetic process;2.32675988418385e-38!GO:0009058;biosynthetic process;2.56853054973635e-38!GO:0031975;envelope;3.03331204523366e-38!GO:0009059;macromolecule biosynthetic process;3.53440051295223e-38!GO:0006996;organelle organization and biogenesis;4.14289378697676e-38!GO:0016071;mRNA metabolic process;6.28950887702006e-38!GO:0046907;intracellular transport;6.21658156863451e-37!GO:0008380;RNA splicing;1.64963658020542e-35!GO:0006397;mRNA processing;1.56295717816485e-33!GO:0065003;macromolecular complex assembly;1.53402926266944e-32!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.44838192521023e-31!GO:0022607;cellular component assembly;3.17296867939852e-30!GO:0006886;intracellular protein transport;4.40337026817542e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.04364666626678e-29!GO:0006259;DNA metabolic process;1.6511951283658e-28!GO:0005740;mitochondrial envelope;5.67664589141011e-28!GO:0005654;nucleoplasm;1.2761361394353e-27!GO:0031966;mitochondrial membrane;2.96949589901532e-26!GO:0005681;spliceosome;6.16319800110248e-26!GO:0019866;organelle inner membrane;7.3585335782549e-26!GO:0007049;cell cycle;2.47595320670669e-25!GO:0005743;mitochondrial inner membrane;3.88662630389277e-24!GO:0051649;establishment of cellular localization;7.40752695286958e-24!GO:0000166;nucleotide binding;1.44742934073844e-23!GO:0051641;cellular localization;1.6311192841696e-23!GO:0044445;cytosolic part;5.47818936989265e-23!GO:0003676;nucleic acid binding;6.21663266230685e-23!GO:0044451;nucleoplasm part;1.99696638641281e-22!GO:0006119;oxidative phosphorylation;4.18766599661267e-22!GO:0016462;pyrophosphatase activity;1.57568266075699e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.95994133073687e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;3.17336849944219e-21!GO:0015935;small ribosomal subunit;5.75645501971028e-21!GO:0017111;nucleoside-triphosphatase activity;7.41283454669729e-21!GO:0006457;protein folding;7.41283454669729e-21!GO:0015934;large ribosomal subunit;1.63493936653229e-20!GO:0000278;mitotic cell cycle;4.52866113516822e-20!GO:0044455;mitochondrial membrane part;7.24466218557332e-20!GO:0031980;mitochondrial lumen;1.49624774547184e-19!GO:0005759;mitochondrial matrix;1.49624774547184e-19!GO:0022402;cell cycle process;1.66689723182523e-19!GO:0005783;endoplasmic reticulum;3.37289330656431e-19!GO:0048770;pigment granule;5.85789585542573e-19!GO:0042470;melanosome;5.85789585542573e-19!GO:0012505;endomembrane system;6.5587755319829e-19!GO:0016070;RNA metabolic process;1.02816118843208e-17!GO:0022618;protein-RNA complex assembly;1.04210174890023e-17!GO:0000502;proteasome complex (sensu Eukaryota);1.74694146120866e-17!GO:0005730;nucleolus;1.8788470004419e-17!GO:0016874;ligase activity;4.14147690555925e-17!GO:0032553;ribonucleotide binding;4.20067631418193e-17!GO:0032555;purine ribonucleotide binding;4.20067631418193e-17!GO:0017076;purine nucleotide binding;9.0133963067644e-17!GO:0005746;mitochondrial respiratory chain;1.74374476396895e-16!GO:0008134;transcription factor binding;1.74374476396895e-16!GO:0006974;response to DNA damage stimulus;5.21813146034499e-16!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;6.31127799606925e-16!GO:0005761;mitochondrial ribosome;8.59739470367854e-16!GO:0000313;organellar ribosome;8.59739470367854e-16!GO:0044432;endoplasmic reticulum part;1.12472861278427e-15!GO:0006512;ubiquitin cycle;1.22394492577544e-15!GO:0048193;Golgi vesicle transport;1.6897061861946e-15!GO:0044265;cellular macromolecule catabolic process;1.87839079819268e-15!GO:0008135;translation factor activity, nucleic acid binding;1.9614768826481e-15!GO:0005694;chromosome;2.05545064640577e-15!GO:0000087;M phase of mitotic cell cycle;2.47923339887549e-15!GO:0007067;mitosis;3.01884909582644e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.01884909582644e-15!GO:0051186;cofactor metabolic process;3.56015110550591e-15!GO:0022403;cell cycle phase;3.5857238000894e-15!GO:0043285;biopolymer catabolic process;5.71146346444233e-15!GO:0006605;protein targeting;5.74523150997585e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;6.34771823856471e-15!GO:0050136;NADH dehydrogenase (quinone) activity;6.85961698444418e-15!GO:0003954;NADH dehydrogenase activity;6.85961698444418e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.85961698444418e-15!GO:0019941;modification-dependent protein catabolic process;1.15333797625913e-14!GO:0043632;modification-dependent macromolecule catabolic process;1.15333797625913e-14!GO:0051082;unfolded protein binding;1.6496395107823e-14!GO:0044257;cellular protein catabolic process;1.90636165134706e-14!GO:0006511;ubiquitin-dependent protein catabolic process;1.93947437771675e-14!GO:0005794;Golgi apparatus;2.78406029153855e-14!GO:0005524;ATP binding;3.28259196942402e-14!GO:0009057;macromolecule catabolic process;3.56582950728031e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.69264935139262e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;4.27928872460601e-14!GO:0000375;RNA splicing, via transesterification reactions;4.27928872460601e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.27928872460601e-14!GO:0044427;chromosomal part;4.4343447242369e-14!GO:0042254;ribosome biogenesis and assembly;4.46056706292874e-14!GO:0032559;adenyl ribonucleotide binding;5.88071896502347e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.22657240454125e-13!GO:0030554;adenyl nucleotide binding;1.82111333283865e-13!GO:0051301;cell division;2.19469533633434e-13!GO:0030163;protein catabolic process;2.51674151462076e-13!GO:0042775;organelle ATP synthesis coupled electron transport;2.81482690015528e-13!GO:0042773;ATP synthesis coupled electron transport;2.81482690015528e-13!GO:0030964;NADH dehydrogenase complex (quinone);3.58919833913663e-13!GO:0045271;respiratory chain complex I;3.58919833913663e-13!GO:0005747;mitochondrial respiratory chain complex I;3.58919833913663e-13!GO:0006281;DNA repair;4.34033637408687e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;9.19230824994272e-13!GO:0051276;chromosome organization and biogenesis;1.71541092267868e-12!GO:0044248;cellular catabolic process;2.32520734695241e-12!GO:0016192;vesicle-mediated transport;3.71540464358789e-12!GO:0009719;response to endogenous stimulus;3.86785756534894e-12!GO:0000279;M phase;4.49260772237304e-12!GO:0009055;electron carrier activity;7.6545843816074e-12!GO:0003743;translation initiation factor activity;9.00254204930384e-12!GO:0043412;biopolymer modification;1.10900050654252e-11!GO:0006732;coenzyme metabolic process;1.12577484159397e-11!GO:0005635;nuclear envelope;1.95972399186359e-11!GO:0006413;translational initiation;2.16066940792545e-11!GO:0005793;ER-Golgi intermediate compartment;4.1350038872041e-11!GO:0003712;transcription cofactor activity;4.54141630751149e-11!GO:0042623;ATPase activity, coupled;5.19347694916781e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.50208130434552e-11!GO:0044453;nuclear membrane part;6.18846218341315e-11!GO:0006260;DNA replication;6.27419890246279e-11!GO:0009259;ribonucleotide metabolic process;7.98903782935139e-11!GO:0031965;nuclear membrane;8.75979598347352e-11!GO:0016887;ATPase activity;1.02661631411762e-10!GO:0006913;nucleocytoplasmic transport;1.45928974762428e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;1.48995083595489e-10!GO:0005789;endoplasmic reticulum membrane;1.77509261168903e-10!GO:0006464;protein modification process;2.12417247897051e-10!GO:0051169;nuclear transport;3.32112652227099e-10!GO:0016604;nuclear body;3.86004347882509e-10!GO:0006399;tRNA metabolic process;4.16331797160332e-10!GO:0006163;purine nucleotide metabolic process;4.47169342217465e-10!GO:0006323;DNA packaging;5.10753100044108e-10!GO:0000074;regulation of progression through cell cycle;6.1331649641939e-10!GO:0048523;negative regulation of cellular process;6.58022366685705e-10!GO:0051726;regulation of cell cycle;6.64662581409811e-10!GO:0012501;programmed cell death;7.16236756620174e-10!GO:0009260;ribonucleotide biosynthetic process;8.12366232737837e-10!GO:0006446;regulation of translational initiation;8.19391951240404e-10!GO:0009150;purine ribonucleotide metabolic process;8.98256188244749e-10!GO:0008565;protein transporter activity;9.8106391152839e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.24576514227349e-09!GO:0006915;apoptosis;1.36272201228816e-09!GO:0006164;purine nucleotide biosynthetic process;1.63715837990464e-09!GO:0008639;small protein conjugating enzyme activity;2.46244091882902e-09!GO:0065004;protein-DNA complex assembly;2.60435288648444e-09!GO:0006366;transcription from RNA polymerase II promoter;2.60665719495847e-09!GO:0043687;post-translational protein modification;2.60665719495847e-09!GO:0006364;rRNA processing;2.85297887253161e-09!GO:0006461;protein complex assembly;2.92154946086533e-09!GO:0009152;purine ribonucleotide biosynthetic process;3.14884220420995e-09!GO:0019787;small conjugating protein ligase activity;3.79632256088816e-09!GO:0004386;helicase activity;3.85929820633845e-09!GO:0004842;ubiquitin-protein ligase activity;4.32325572487271e-09!GO:0006888;ER to Golgi vesicle-mediated transport;4.32325572487271e-09!GO:0065002;intracellular protein transport across a membrane;4.66705786779281e-09!GO:0015630;microtubule cytoskeleton;4.96912946943941e-09!GO:0050794;regulation of cellular process;5.01343391503124e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.08947377186959e-09!GO:0008026;ATP-dependent helicase activity;5.9213898764488e-09!GO:0005643;nuclear pore;6.25772514429096e-09!GO:0008219;cell death;6.5382347451793e-09!GO:0016265;death;6.5382347451793e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.6611441932771e-09!GO:0016072;rRNA metabolic process;7.24810777501679e-09!GO:0009199;ribonucleoside triphosphate metabolic process;8.62113070217677e-09!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.04432502205553e-08!GO:0004812;aminoacyl-tRNA ligase activity;1.04432502205553e-08!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.04432502205553e-08!GO:0000785;chromatin;1.10385366576269e-08!GO:0009060;aerobic respiration;1.11356485705937e-08!GO:0009141;nucleoside triphosphate metabolic process;1.15018439357101e-08!GO:0045333;cellular respiration;1.768740374494e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.7906057294547e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.7906057294547e-08!GO:0043038;amino acid activation;1.83842215182751e-08!GO:0006418;tRNA aminoacylation for protein translation;1.83842215182751e-08!GO:0043039;tRNA aminoacylation;1.83842215182751e-08!GO:0003924;GTPase activity;1.83842215182751e-08!GO:0006333;chromatin assembly or disassembly;2.18549370721882e-08!GO:0048519;negative regulation of biological process;2.52957377838613e-08!GO:0030120;vesicle coat;2.62114635603988e-08!GO:0030662;coated vesicle membrane;2.62114635603988e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.76350106926279e-08!GO:0015986;ATP synthesis coupled proton transport;3.46014629083717e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.46014629083717e-08!GO:0016607;nuclear speck;3.53867404861405e-08!GO:0017038;protein import;4.8386238910307e-08!GO:0009142;nucleoside triphosphate biosynthetic process;5.33507850589561e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.33507850589561e-08!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.19431536760807e-08!GO:0005788;endoplasmic reticulum lumen;7.7636252671335e-08!GO:0016881;acid-amino acid ligase activity;8.2396119149647e-08!GO:0046930;pore complex;9.55513534533989e-08!GO:0046034;ATP metabolic process;9.82292773330291e-08!GO:0048475;coated membrane;9.82292773330291e-08!GO:0030117;membrane coat;9.82292773330291e-08!GO:0019829;cation-transporting ATPase activity;1.0972350436403e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.14597355486606e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.14597355486606e-07!GO:0050657;nucleic acid transport;1.25866019620157e-07!GO:0051236;establishment of RNA localization;1.25866019620157e-07!GO:0050658;RNA transport;1.25866019620157e-07!GO:0005667;transcription factor complex;1.52685775022607e-07!GO:0006403;RNA localization;1.67886324491975e-07!GO:0051188;cofactor biosynthetic process;1.7275411476605e-07!GO:0006099;tricarboxylic acid cycle;2.12817619878795e-07!GO:0046356;acetyl-CoA catabolic process;2.12817619878795e-07!GO:0005839;proteasome core complex (sensu Eukaryota);2.82869170639106e-07!GO:0051246;regulation of protein metabolic process;2.94333394081838e-07!GO:0051187;cofactor catabolic process;3.16000281708935e-07!GO:0007005;mitochondrion organization and biogenesis;3.22952089314124e-07!GO:0009056;catabolic process;3.23552239028873e-07!GO:0003697;single-stranded DNA binding;3.27546908443327e-07!GO:0006334;nucleosome assembly;3.69333110697842e-07!GO:0007010;cytoskeleton organization and biogenesis;4.4745638334934e-07!GO:0043069;negative regulation of programmed cell death;4.61518909636526e-07!GO:0015078;hydrogen ion transmembrane transporter activity;4.73159038805744e-07!GO:0006916;anti-apoptosis;5.33393864168275e-07!GO:0006754;ATP biosynthetic process;5.36051006836733e-07!GO:0006753;nucleoside phosphate metabolic process;5.36051006836733e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.09967102073889e-07!GO:0005819;spindle;6.26667114715673e-07!GO:0009109;coenzyme catabolic process;6.35171676575778e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.49756413226249e-07!GO:0016491;oxidoreductase activity;8.44732900523296e-07!GO:0006084;acetyl-CoA metabolic process;8.44732900523296e-07!GO:0005768;endosome;9.47645948511561e-07!GO:0043066;negative regulation of apoptosis;9.60056797314514e-07!GO:0031497;chromatin assembly;1.04745668230107e-06!GO:0043067;regulation of programmed cell death;1.09904755816508e-06!GO:0043566;structure-specific DNA binding;1.1644138580709e-06!GO:0009117;nucleotide metabolic process;1.23791526952317e-06!GO:0042981;regulation of apoptosis;1.24881309095302e-06!GO:0050789;regulation of biological process;1.41069157627415e-06!GO:0031324;negative regulation of cellular metabolic process;1.90266216156334e-06!GO:0004298;threonine endopeptidase activity;2.07183628372817e-06!GO:0045259;proton-transporting ATP synthase complex;2.21127895162345e-06!GO:0016023;cytoplasmic membrane-bound vesicle;2.66520337398068e-06!GO:0051789;response to protein stimulus;2.72140096409179e-06!GO:0006986;response to unfolded protein;2.72140096409179e-06!GO:0044431;Golgi apparatus part;3.17230423313827e-06!GO:0031988;membrane-bound vesicle;3.63510182193901e-06!GO:0000245;spliceosome assembly;3.73536834480426e-06!GO:0005798;Golgi-associated vesicle;3.93168897974631e-06!GO:0032446;protein modification by small protein conjugation;4.71694732734191e-06!GO:0016853;isomerase activity;5.03202524054419e-06!GO:0051028;mRNA transport;5.03202524054419e-06!GO:0000151;ubiquitin ligase complex;5.80331690000181e-06!GO:0016567;protein ubiquitination;6.3560296245814e-06!GO:0016049;cell growth;6.44204076328965e-06!GO:0006613;cotranslational protein targeting to membrane;6.83711573269199e-06!GO:0016779;nucleotidyltransferase activity;6.84150918497058e-06!GO:0009108;coenzyme biosynthetic process;6.8500758480409e-06!GO:0003724;RNA helicase activity;7.05386603395856e-06!GO:0008361;regulation of cell size;7.07330313595029e-06!GO:0043623;cellular protein complex assembly;7.26243765399076e-06!GO:0006752;group transfer coenzyme metabolic process;7.35533060999763e-06!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.37438097252359e-06!GO:0030036;actin cytoskeleton organization and biogenesis;7.52298933096058e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;8.24207778789756e-06!GO:0005525;GTP binding;8.35639985634643e-06!GO:0051329;interphase of mitotic cell cycle;9.33858039960334e-06!GO:0006793;phosphorus metabolic process;9.34903750738243e-06!GO:0006796;phosphate metabolic process;9.34903750738243e-06!GO:0051170;nuclear import;1.01547128150617e-05!GO:0005762;mitochondrial large ribosomal subunit;1.03763643620825e-05!GO:0000315;organellar large ribosomal subunit;1.03763643620825e-05!GO:0019843;rRNA binding;1.08405824591478e-05!GO:0016568;chromatin modification;1.10137439651377e-05!GO:0051325;interphase;1.10804697018844e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.19531604765308e-05!GO:0007051;spindle organization and biogenesis;1.30782526414062e-05!GO:0000775;chromosome, pericentric region;1.39110654497536e-05!GO:0003713;transcription coactivator activity;1.43716023143463e-05!GO:0005813;centrosome;1.57661521266396e-05!GO:0003714;transcription corepressor activity;1.57661521266396e-05!GO:0016564;transcription repressor activity;1.58029954644331e-05!GO:0031252;leading edge;1.70885652833406e-05!GO:0009892;negative regulation of metabolic process;1.72626649137786e-05!GO:0015980;energy derivation by oxidation of organic compounds;1.81041726381882e-05!GO:0016740;transferase activity;1.82070861275199e-05!GO:0016310;phosphorylation;1.8773649137131e-05!GO:0044440;endosomal part;1.90983218830389e-05!GO:0010008;endosome membrane;1.90983218830389e-05!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;2.02237000691179e-05!GO:0045454;cell redox homeostasis;2.11181492479908e-05!GO:0030867;rough endoplasmic reticulum membrane;2.2315309373885e-05!GO:0006606;protein import into nucleus;2.30961914638243e-05!GO:0016787;hydrolase activity;2.54981404780538e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.6918508190619e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;2.7173097259234e-05!GO:0005815;microtubule organizing center;3.11061188663849e-05!GO:0016563;transcription activator activity;3.20374731735159e-05!GO:0006091;generation of precursor metabolites and energy;3.69092523493267e-05!GO:0016859;cis-trans isomerase activity;3.71180519187547e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.63198453898217e-05!GO:0001558;regulation of cell growth;4.72122016139914e-05!GO:0043021;ribonucleoprotein binding;5.37342337596746e-05!GO:0032561;guanyl ribonucleotide binding;5.44036027908287e-05!GO:0019001;guanyl nucleotide binding;5.44036027908287e-05!GO:0000314;organellar small ribosomal subunit;5.46858905952991e-05!GO:0005763;mitochondrial small ribosomal subunit;5.46858905952991e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;6.01490867870127e-05!GO:0051427;hormone receptor binding;6.65778158347631e-05!GO:0045786;negative regulation of progression through cell cycle;6.72108269581135e-05!GO:0003899;DNA-directed RNA polymerase activity;6.72283107444261e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;6.7375685269306e-05!GO:0008654;phospholipid biosynthetic process;6.89694227210044e-05!GO:0030029;actin filament-based process;7.5701110087992e-05!GO:0031410;cytoplasmic vesicle;7.81644862892588e-05!GO:0030133;transport vesicle;7.87767297181636e-05!GO:0031982;vesicle;8.01868871507839e-05!GO:0007249;I-kappaB kinase/NF-kappaB cascade;9.57298507331742e-05!GO:0019222;regulation of metabolic process;0.00011331312322486!GO:0008092;cytoskeletal protein binding;0.000117738561022621!GO:0006261;DNA-dependent DNA replication;0.000125425663800252!GO:0000139;Golgi membrane;0.000126169277804425!GO:0006612;protein targeting to membrane;0.000143745250775037!GO:0035257;nuclear hormone receptor binding;0.000144005682355898!GO:0005770;late endosome;0.000156079488080153!GO:0016481;negative regulation of transcription;0.000167250279272212!GO:0005905;coated pit;0.000172024798692752!GO:0031968;organelle outer membrane;0.000187052613616771!GO:0033116;ER-Golgi intermediate compartment membrane;0.000191077612810459!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000193938098767749!GO:0051168;nuclear export;0.000197533878095408!GO:0006414;translational elongation;0.00019797847715718!GO:0000075;cell cycle checkpoint;0.000199587360950537!GO:0008186;RNA-dependent ATPase activity;0.000200239441186476!GO:0005048;signal sequence binding;0.000200239441186476!GO:0008094;DNA-dependent ATPase activity;0.000206938525149824!GO:0019867;outer membrane;0.000208471930520792!GO:0030663;COPI coated vesicle membrane;0.000228458607799337!GO:0030126;COPI vesicle coat;0.000228458607799337!GO:0005874;microtubule;0.000254019034588895!GO:0005657;replication fork;0.000258086888112025!GO:0005885;Arp2/3 protein complex;0.000266960520079159!GO:0005773;vacuole;0.00032284878522084!GO:0008250;oligosaccharyl transferase complex;0.000335255164310621!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000340193949312455!GO:0043284;biopolymer biosynthetic process;0.000353703555508959!GO:0006626;protein targeting to mitochondrion;0.000374073128863169!GO:0019899;enzyme binding;0.000375289822106685!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000500735972837641!GO:0005769;early endosome;0.000519808438765972!GO:0048522;positive regulation of cellular process;0.000520369722501725!GO:0030137;COPI-coated vesicle;0.000537878037460303!GO:0004576;oligosaccharyl transferase activity;0.000543380979285878!GO:0005741;mitochondrial outer membrane;0.000569862153023215!GO:0004004;ATP-dependent RNA helicase activity;0.000573068769807894!GO:0003684;damaged DNA binding;0.000608561406373965!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000661717008405604!GO:0000786;nucleosome;0.000698319699586132!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000699393507474184!GO:0016363;nuclear matrix;0.000703904558868177!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000706019200218339!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00071049369599387!GO:0043681;protein import into mitochondrion;0.000737432878046506!GO:0051252;regulation of RNA metabolic process;0.000798801661508336!GO:0006839;mitochondrial transport;0.000816353555921649!GO:0051920;peroxiredoxin activity;0.000818819861569333!GO:0006891;intra-Golgi vesicle-mediated transport;0.000864993614698976!GO:0046474;glycerophospholipid biosynthetic process;0.000897251013276586!GO:0009165;nucleotide biosynthetic process;0.000960058325432471!GO:0030880;RNA polymerase complex;0.00101452791897362!GO:0048471;perinuclear region of cytoplasm;0.00109478789668021!GO:0044452;nucleolar part;0.00118024370150961!GO:0003682;chromatin binding;0.001212126721777!GO:0065007;biological regulation;0.0012209652392192!GO:0007088;regulation of mitosis;0.00134349746523327!GO:0007243;protein kinase cascade;0.00137332132321306!GO:0018196;peptidyl-asparagine modification;0.00137332132321306!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00137332132321306!GO:0044262;cellular carbohydrate metabolic process;0.00140061312791778!GO:0000323;lytic vacuole;0.00144260531765262!GO:0005764;lysosome;0.00144260531765262!GO:0031072;heat shock protein binding;0.0014607500066622!GO:0006383;transcription from RNA polymerase III promoter;0.00148486892116712!GO:0000082;G1/S transition of mitotic cell cycle;0.00151781128085433!GO:0005791;rough endoplasmic reticulum;0.00152921895578658!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00152921895578658!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00152921895578658!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00152921895578658!GO:0005684;U2-dependent spliceosome;0.00160094639832662!GO:0000776;kinetochore;0.00164721512495328!GO:0003729;mRNA binding;0.0016547865493385!GO:0048500;signal recognition particle;0.00168451963014451!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0018943099385526!GO:0000059;protein import into nucleus, docking;0.00203572805045138!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00204967633266735!GO:0042802;identical protein binding;0.00205844317766065!GO:0046489;phosphoinositide biosynthetic process;0.00215716769635969!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0023502772528998!GO:0000428;DNA-directed RNA polymerase complex;0.0023502772528998!GO:0030658;transport vesicle membrane;0.00240968259304126!GO:0008033;tRNA processing;0.00251909365128184!GO:0015631;tubulin binding;0.00268158495827532!GO:0007006;mitochondrial membrane organization and biogenesis;0.00270686632626477!GO:0030176;integral to endoplasmic reticulum membrane;0.00278068927605494!GO:0048487;beta-tubulin binding;0.00280233145944149!GO:0040008;regulation of growth;0.00286473469988238!GO:0043488;regulation of mRNA stability;0.00287192653362379!GO:0043487;regulation of RNA stability;0.00287192653362379!GO:0030134;ER to Golgi transport vesicle;0.00287585463827111!GO:0030521;androgen receptor signaling pathway;0.00289959992104828!GO:0003711;transcription elongation regulator activity;0.00292559553278971!GO:0003678;DNA helicase activity;0.00293378721987474!GO:0030132;clathrin coat of coated pit;0.00309074007865207!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00314738734026651!GO:0051087;chaperone binding;0.003211029127505!GO:0046483;heterocycle metabolic process;0.00343842106571031!GO:0003690;double-stranded DNA binding;0.00344963050812061!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00348979611868703!GO:0015399;primary active transmembrane transporter activity;0.00348979611868703!GO:0006302;double-strand break repair;0.0035206265675338!GO:0015992;proton transport;0.00354571376453198!GO:0008312;7S RNA binding;0.00368331493041037!GO:0007052;mitotic spindle organization and biogenesis;0.00370249308240068!GO:0001726;ruffle;0.0037569148798272!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00379598753954662!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00379598753954662!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.00410264214293577!GO:0003746;translation elongation factor activity;0.00432539612302723!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00434354153239909!GO:0045047;protein targeting to ER;0.00434354153239909!GO:0006818;hydrogen transport;0.00435181590658373!GO:0006402;mRNA catabolic process;0.00437722503565922!GO:0008180;signalosome;0.00439524791733542!GO:0035258;steroid hormone receptor binding;0.00443258430701044!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00447399259504924!GO:0006979;response to oxidative stress;0.00448091813376129!GO:0031124;mRNA 3'-end processing;0.00466821830579668!GO:0007093;mitotic cell cycle checkpoint;0.00468121619316709!GO:0030127;COPII vesicle coat;0.00468121619316709!GO:0012507;ER to Golgi transport vesicle membrane;0.00468121619316709!GO:0017166;vinculin binding;0.00482688677403749!GO:0032508;DNA duplex unwinding;0.00491798532755985!GO:0032392;DNA geometric change;0.00491798532755985!GO:0045045;secretory pathway;0.00502014180971716!GO:0030118;clathrin coat;0.00503291799904681!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00515307144639757!GO:0008139;nuclear localization sequence binding;0.00517760830395117!GO:0009112;nucleobase metabolic process;0.00524348490714807!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00524348490714807!GO:0030659;cytoplasmic vesicle membrane;0.00563316517940192!GO:0007050;cell cycle arrest;0.00579271809104035!GO:0000910;cytokinesis;0.00581664474176281!GO:0006595;polyamine metabolic process;0.00606356401287386!GO:0031543;peptidyl-proline dioxygenase activity;0.00606559282100801!GO:0006289;nucleotide-excision repair;0.00616611506620361!GO:0051052;regulation of DNA metabolic process;0.00621292443264255!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00646808425291282!GO:0006354;RNA elongation;0.00651025024687784!GO:0006401;RNA catabolic process;0.00653790669062034!GO:0006352;transcription initiation;0.00662771131015669!GO:0045892;negative regulation of transcription, DNA-dependent;0.00670793726412673!GO:0016197;endosome transport;0.00670842556925864!GO:0030660;Golgi-associated vesicle membrane;0.00690635973791479!GO:0007264;small GTPase mediated signal transduction;0.00709347619559801!GO:0051540;metal cluster binding;0.00718308083486411!GO:0051536;iron-sulfur cluster binding;0.00718308083486411!GO:0005869;dynactin complex;0.00726628675590415!GO:0019206;nucleoside kinase activity;0.00730182986548639!GO:0048468;cell development;0.00733016526878881!GO:0008047;enzyme activator activity;0.00749975793935423!GO:0006650;glycerophospholipid metabolic process;0.00761060097766183!GO:0051128;regulation of cellular component organization and biogenesis;0.00799212141767315!GO:0000049;tRNA binding;0.00812588244751304!GO:0016251;general RNA polymerase II transcription factor activity;0.00833230008931456!GO:0007059;chromosome segregation;0.00838152320547722!GO:0006268;DNA unwinding during replication;0.00853776856231077!GO:0031323;regulation of cellular metabolic process;0.0085687321121717!GO:0003702;RNA polymerase II transcription factor activity;0.00873714911721897!GO:0016272;prefoldin complex;0.00874722772381914!GO:0006892;post-Golgi vesicle-mediated transport;0.0089410082147964!GO:0006405;RNA export from nucleus;0.00899466795129907!GO:0006007;glucose catabolic process;0.00900745460602483!GO:0031418;L-ascorbic acid binding;0.00936687608260793!GO:0043433;negative regulation of transcription factor activity;0.00936687608260793!GO:0005862;muscle thin filament tropomyosin;0.00936687608260793!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00948809599924085!GO:0004674;protein serine/threonine kinase activity;0.00963028139570776!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00964195221633326!GO:0019798;procollagen-proline dioxygenase activity;0.00964195221633326!GO:0007017;microtubule-based process;0.00969503258852165!GO:0044433;cytoplasmic vesicle part;0.0100238102509867!GO:0004527;exonuclease activity;0.01002803065425!GO:0032984;macromolecular complex disassembly;0.0100295894920289!GO:0045941;positive regulation of transcription;0.0102081983174508!GO:0000339;RNA cap binding;0.0104530742180666!GO:0005876;spindle microtubule;0.0106309413298194!GO:0045893;positive regulation of transcription, DNA-dependent;0.0107180080568199!GO:0065009;regulation of a molecular function;0.0110343149192794!GO:0006310;DNA recombination;0.0114080354295155!GO:0016044;membrane organization and biogenesis;0.0114122394381767!GO:0005832;chaperonin-containing T-complex;0.011774990877805!GO:0008022;protein C-terminus binding;0.0119063711038948!GO:0051287;NAD binding;0.0119977424762028!GO:0005637;nuclear inner membrane;0.0120025845245484!GO:0030027;lamellipodium;0.0122601462867784!GO:0009116;nucleoside metabolic process;0.0123165859522815!GO:0046467;membrane lipid biosynthetic process;0.0123165859522815!GO:0050681;androgen receptor binding;0.0124681316897507!GO:0006509;membrane protein ectodomain proteolysis;0.0125569050931456!GO:0033619;membrane protein proteolysis;0.0125569050931456!GO:0006497;protein amino acid lipidation;0.0128743084437243!GO:0043022;ribosome binding;0.0130043949498119!GO:0004177;aminopeptidase activity;0.0135385987434618!GO:0043624;cellular protein complex disassembly;0.0136046715019877!GO:0006950;response to stress;0.0136510619268527!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0138339295063613!GO:0016408;C-acyltransferase activity;0.0138382432589382!GO:0007021;tubulin folding;0.0139299007082036!GO:0006740;NADPH regeneration;0.0140627164955212!GO:0006098;pentose-phosphate shunt;0.0140627164955212!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0140627164955212!GO:0015002;heme-copper terminal oxidase activity;0.0140627164955212!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0140627164955212!GO:0004129;cytochrome-c oxidase activity;0.0140627164955212!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0142286780262992!GO:0030384;phosphoinositide metabolic process;0.0142872314909353!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0144454295331501!GO:0045792;negative regulation of cell size;0.0149656323247006!GO:0008632;apoptotic program;0.0150325029288757!GO:0030041;actin filament polymerization;0.0151771623631869!GO:0006984;ER-nuclear signaling pathway;0.0154955807997659!GO:0006611;protein export from nucleus;0.0161141724575501!GO:0031529;ruffle organization and biogenesis;0.0162827587824535!GO:0019752;carboxylic acid metabolic process;0.016282838757066!GO:0043241;protein complex disassembly;0.0167677264219675!GO:0004003;ATP-dependent DNA helicase activity;0.0168574698866098!GO:0006778;porphyrin metabolic process;0.0169507645643323!GO:0033013;tetrapyrrole metabolic process;0.0169507645643323!GO:0006350;transcription;0.016969913151073!GO:0050662;coenzyme binding;0.0170359376950169!GO:0048518;positive regulation of biological process;0.0170512368429326!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0174988812092885!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0174988812092885!GO:0030308;negative regulation of cell growth;0.0175245080144119!GO:0006220;pyrimidine nucleotide metabolic process;0.0176521222782848!GO:0006144;purine base metabolic process;0.0176891204162393!GO:0008168;methyltransferase activity;0.0178009814934785!GO:0016741;transferase activity, transferring one-carbon groups;0.0179072015397332!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0180444374254715!GO:0006082;organic acid metabolic process;0.0184098015682592!GO:0050811;GABA receptor binding;0.0185748666756346!GO:0030833;regulation of actin filament polymerization;0.0187646605647871!GO:0031123;RNA 3'-end processing;0.01882013010405!GO:0006506;GPI anchor biosynthetic process;0.0193244328227568!GO:0030119;AP-type membrane coat adaptor complex;0.0194914061935381!GO:0030125;clathrin vesicle coat;0.0195451936954368!GO:0030665;clathrin coated vesicle membrane;0.0195451936954368!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0198596260581541!GO:0030496;midbody;0.0202071483679963!GO:0000922;spindle pole;0.0202470110490641!GO:0042168;heme metabolic process;0.020323358299546!GO:0016126;sterol biosynthetic process;0.0210109056811507!GO:0051539;4 iron, 4 sulfur cluster binding;0.0211901746783362!GO:0003779;actin binding;0.0217463751246261!GO:0006520;amino acid metabolic process;0.02200780960209!GO:0031625;ubiquitin protein ligase binding;0.022395723726021!GO:0022890;inorganic cation transmembrane transporter activity;0.0226905250059389!GO:0006284;base-excision repair;0.0227692836201379!GO:0000209;protein polyubiquitination;0.0227938036622476!GO:0001527;microfibril;0.022935959944471!GO:0012506;vesicle membrane;0.0233318051786929!GO:0035035;histone acetyltransferase binding;0.023772880671853!GO:0043492;ATPase activity, coupled to movement of substances;0.0238169995156224!GO:0008652;amino acid biosynthetic process;0.0238805686684787!GO:0008154;actin polymerization and/or depolymerization;0.0240987361355303!GO:0005758;mitochondrial intermembrane space;0.024210613617155!GO:0008538;proteasome activator activity;0.0253890173223356!GO:0007034;vacuolar transport;0.0267871045257304!GO:0005669;transcription factor TFIID complex;0.0270838291245849!GO:0006505;GPI anchor metabolic process;0.027325466641596!GO:0035267;NuA4 histone acetyltransferase complex;0.0273294798821592!GO:0005096;GTPase activator activity;0.0275478471285382!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0280971266591606!GO:0047485;protein N-terminus binding;0.0281929314782541!GO:0001725;stress fiber;0.028302450389835!GO:0032432;actin filament bundle;0.028302450389835!GO:0031902;late endosome membrane;0.0285956595661919!GO:0000792;heterochromatin;0.0285956595661919!GO:0008320;protein transmembrane transporter activity;0.0288068131489053!GO:0051101;regulation of DNA binding;0.0290974995227186!GO:0031901;early endosome membrane;0.0297038335264998!GO:0006378;mRNA polyadenylation;0.0297561730321097!GO:0030131;clathrin adaptor complex;0.0297723550683158!GO:0009303;rRNA transcription;0.0298963804836264!GO:0008610;lipid biosynthetic process;0.0299314968836629!GO:0000228;nuclear chromosome;0.0309155585269465!GO:0030032;lamellipodium biogenesis;0.0314071847118361!GO:0003756;protein disulfide isomerase activity;0.0314597488334237!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0314597488334237!GO:0043189;H4/H2A histone acetyltransferase complex;0.0314832648063244!GO:0030508;thiol-disulfide exchange intermediate activity;0.0320755822485404!GO:0043596;nuclear replication fork;0.0323713232731288!GO:0009124;nucleoside monophosphate biosynthetic process;0.0328943342451027!GO:0009123;nucleoside monophosphate metabolic process;0.0328943342451027!GO:0042158;lipoprotein biosynthetic process;0.0332259450717047!GO:0007040;lysosome organization and biogenesis;0.0334773319673057!GO:0000096;sulfur amino acid metabolic process;0.0337532408294649!GO:0003923;GPI-anchor transamidase activity;0.0338600169620643!GO:0016255;attachment of GPI anchor to protein;0.0338600169620643!GO:0042765;GPI-anchor transamidase complex;0.0338600169620643!GO:0046426;negative regulation of JAK-STAT cascade;0.0340960507219096!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0342885761416372!GO:0022408;negative regulation of cell-cell adhesion;0.0343317865789775!GO:0005784;translocon complex;0.034692098745375!GO:0051098;regulation of binding;0.0352413163293024!GO:0000118;histone deacetylase complex;0.0355321718425961!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0356340560496613!GO:0030518;steroid hormone receptor signaling pathway;0.0357742354543882!GO:0006275;regulation of DNA replication;0.0357742354543882!GO:0031371;ubiquitin conjugating enzyme complex;0.0357742354543882!GO:0045936;negative regulation of phosphate metabolic process;0.0357742354543882!GO:0009967;positive regulation of signal transduction;0.0372344654128031!GO:0005583;fibrillar collagen;0.0374924156387027!GO:0006376;mRNA splice site selection;0.0376188435361439!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0376188435361439!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0381857143931564!GO:0033043;regulation of organelle organization and biogenesis;0.0381857143931564!GO:0031272;regulation of pseudopodium formation;0.0383132215449428!GO:0031269;pseudopodium formation;0.0383132215449428!GO:0031344;regulation of cell projection organization and biogenesis;0.0383132215449428!GO:0031268;pseudopodium organization and biogenesis;0.0383132215449428!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0383132215449428!GO:0031274;positive regulation of pseudopodium formation;0.0383132215449428!GO:0048144;fibroblast proliferation;0.0384449773763754!GO:0048145;regulation of fibroblast proliferation;0.0384449773763754!GO:0007346;regulation of progression through mitotic cell cycle;0.039191438982171!GO:0004518;nuclease activity;0.0394807703105057!GO:0051271;negative regulation of cell motility;0.0402646214723953!GO:0033559;unsaturated fatty acid metabolic process;0.0404290981031748!GO:0006636;unsaturated fatty acid biosynthetic process;0.0404290981031748!GO:0009119;ribonucleoside metabolic process;0.0409066985216393!GO:0032940;secretion by cell;0.0413627422577244!GO:0006779;porphyrin biosynthetic process;0.0413627422577244!GO:0033014;tetrapyrrole biosynthetic process;0.0413627422577244!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0413627422577244!GO:0010257;NADH dehydrogenase complex assembly;0.0413627422577244!GO:0033108;mitochondrial respiratory chain complex assembly;0.0413627422577244!GO:0008601;protein phosphatase type 2A regulator activity;0.0415661745327817!GO:0043065;positive regulation of apoptosis;0.0424997463755183!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0433379409424934!GO:0030433;ER-associated protein catabolic process;0.0435744035560401!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0435744035560401!GO:0016584;nucleosome positioning;0.0442007321566278!GO:0009262;deoxyribonucleotide metabolic process;0.0446404459857052!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0451758630255968!GO:0007033;vacuole organization and biogenesis;0.0455212831192261!GO:0005856;cytoskeleton;0.0462587240421905!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0462665947451832!GO:0008283;cell proliferation;0.0467590935676968!GO:0018193;peptidyl-amino acid modification;0.0467590935676968!GO:0000178;exosome (RNase complex);0.0469623593319406!GO:0010468;regulation of gene expression;0.0469801262755464!GO:0006338;chromatin remodeling;0.0477107856549553!GO:0048146;positive regulation of fibroblast proliferation;0.0477107856549553!GO:0030911;TPR domain binding;0.0477107856549553!GO:0005801;cis-Golgi network;0.0477107856549553!GO:0004656;procollagen-proline 4-dioxygenase activity;0.0477107856549553!GO:0031545;peptidyl-proline 4-dioxygenase activity;0.0477107856549553!GO:0043068;positive regulation of programmed cell death;0.0489159542973007!GO:0033673;negative regulation of kinase activity;0.0493059111540608!GO:0006469;negative regulation of protein kinase activity;0.0493059111540608!GO:0016860;intramolecular oxidoreductase activity;0.0495054490380994!GO:0006783;heme biosynthetic process;0.0499924134510266!GO:0004448;isocitrate dehydrogenase activity;0.0499924134510266
|sample_id=11554
|sample_note=
|sample_sex=M
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=skin
|top_motifs=SRF:1.42197058416;HAND1,2:1.37254050216;HES1:1.30935337992;FOXL1:1.20871343224;NR3C1:1.1058265773;GCM1,2:1.07296940015;GZF1:1.0339685021;ALX4:1.03381185073;HOX{A5,B5}:1.03136473653;KLF4:1.0262398141;TEAD1:1.00959608225;ZNF238:0.959486041475;GFI1:0.930346002815;NFIX:0.869940242544;GTF2A1,2:0.863006063684;MYBL2:0.859508866725;TP53:0.841304620604;EBF1:0.827423546793;HSF1,2:0.815718642234;NKX2-2,8:0.814891244497;HBP1_HMGB_SSRP1_UBTF:0.766630988361;CDC5L:0.711604933525;UFEwm:0.70931380392;EN1,2:0.703373032021;ESR1:0.703123458886;GFI1B:0.665421789227;NKX3-1:0.660852723074;TFDP1:0.65403227733;GLI1..3:0.641076070179;ZIC1..3:0.632301318321;PDX1:0.628414416899;IKZF1:0.611346811701;MYB:0.585217736373;HMGA1,2:0.561421800805;NFE2L1:0.557501066264;GTF2I:0.545851234214;HIF1A:0.545760131571;GATA4:0.542873972081;PAX1,9:0.528701572524;ZNF384:0.528109743868;TFAP4:0.523493068349;PAX3,7:0.516185654276;TAL1_TCF{3,4,12}:0.513585049049;XCPE1{core}:0.51171774408;TBX4,5:0.505332016907;ZBTB6:0.475388696335;TLX1..3_NFIC{dimer}:0.474501585809;SOX17:0.473090051734;LHX3,4:0.461669148685;PRDM1:0.440425026803;MZF1:0.438156583792;NFE2L2:0.436023634843;LEF1_TCF7_TCF7L1,2:0.435588531953;RXR{A,B,G}:0.409005719607;E2F1..5:0.405369326482;MAZ:0.387264840499;TFAP2{A,C}:0.382220036577;TBP:0.379446244824;ELK1,4_GABP{A,B1}:0.376638599682;SMAD1..7,9:0.374926760658;XBP1:0.367358705047;NFATC1..3:0.359150102754;BACH2:0.35477761859;PAX8:0.354153451151;TFCP2:0.347562790728;NKX3-2:0.327161868534;POU5F1:0.323057166148;PRRX1,2:0.320033272028;RXRA_VDR{dimer}:0.309635238437;HMX1:0.288712482771;RREB1:0.279706518318;MTE{core}:0.276195861388;STAT5{A,B}:0.268864878985;ZNF423:0.257192623001;NFY{A,B,C}:0.2539771431;ADNP_IRX_SIX_ZHX:0.245473972287;MEF2{A,B,C,D}:0.232338150385;TFAP2B:0.193351705224;HOX{A4,D4}:0.178435228477;YY1:0.173634590091;FOXQ1:0.172675147782;AHR_ARNT_ARNT2:0.161210825281;ZNF143:0.14129381613;HLF:0.137172955781;FOS_FOS{B,L1}_JUN{B,D}:0.136567313268;ZNF148:0.120349025216;MAFB:0.107994324969;CRX:0.106135719104;NFE2:0.0941320682109;EVI1:0.0918302087326;HOXA9_MEIS1:0.0674193329513;NRF1:0.0653516164746;SOX{8,9,10}:0.0487419946455;FOSL2:0.0242489742682;POU2F1..3:0.0223501889744;AIRE:0.0119151405483;ATF6:-0.00440416539314;TOPORS:-0.0144873153198;NANOG{mouse}:-0.0188502220947;PBX1:-0.0363018637585;HIC1:-0.0398856515665;SPZ1:-0.0425189164237;PATZ1:-0.0485643673605;NKX2-3_NKX2-5:-0.0533621907677;NR6A1:-0.0560439664289;JUN:-0.066222543269;HNF1A:-0.0664638631864;NHLH1,2:-0.0703755591496;SOX5:-0.0832333030162;SP1:-0.0841258963387;FOXM1:-0.11219133229;POU3F1..4:-0.12058572139;ESRRA:-0.123461742858;PPARG:-0.123534508515;CEBPA,B_DDIT3:-0.13138531437;MTF1:-0.142108231566;RFX1:-0.147327280253;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.151107717759;SOX2:-0.161717238173;NKX6-1,2:-0.166913331492;HNF4A_NR2F1,2:-0.171897406039;POU1F1:-0.179030281303;FOX{I1,J2}:-0.194298685188;OCT4_SOX2{dimer}:-0.195231867182;NR1H4:-0.196111755539;DMAP1_NCOR{1,2}_SMARC:-0.204618758108;RUNX1..3:-0.226011906988;MYFfamily:-0.230089275344;PAX5:-0.238596467467;EP300:-0.239748806157;REST:-0.24065194614;FOXD3:-0.247873700596;FOXO1,3,4:-0.254391693234;NR5A1,2:-0.259007688752;TEF:-0.262008960466;HOX{A6,A7,B6,B7}:-0.267925415731;FOXA2:-0.268943375753;MED-1{core}:-0.292659535352;STAT2,4,6:-0.293537037899;PAX4:-0.294251900416;T:-0.309422693169;IRF1,2:-0.315948824412;ARID5B:-0.318711982514;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.33937519755;VSX1,2:-0.343014722235;EGR1..3:-0.346302706976;TGIF1:-0.354697317168;AR:-0.375217901;ELF1,2,4:-0.375487618223;STAT1,3:-0.380133777954;FOXP3:-0.383032775528;PITX1..3:-0.387588070139;NANOG:-0.398510464179;ETS1,2:-0.40125549634;NFKB1_REL_RELA:-0.41075560564;ALX1:-0.419381728608;SPI1:-0.437008540298;bHLH_family:-0.461741654476;GATA6:-0.46816369156;ZFP161:-0.468645378122;RBPJ:-0.470456849864;NFIL3:-0.505222330793;LMO2:-0.5158707428;ATF5_CREB3:-0.517790529238;ONECUT1,2:-0.521737541732;SPIB:-0.527540070939;BREu{core}:-0.532602132213;CUX2:-0.596290299735;BPTF:-0.599804019465;SNAI1..3:-0.611985734395;PAX2:-0.657699635583;POU6F1:-0.661612067833;DBP:-0.672903860545;ATF4:-0.677855407276;FOX{D1,D2}:-0.714224652486;FOXN1:-0.719650018926;IRF7:-0.73207313786;CREB1:-0.739654857705;PAX6:-0.746408198611;CDX1,2,4:-0.764539216046;NKX2-1,4:-0.815093215006;RFX2..5_RFXANK_RFXAP:-0.825315907039;FOXP1:-0.852677106796;ZEB1:-0.861428965126;SREBF1,2:-0.903349582237;FOX{F1,F2,J1}:-0.964403738014;IKZF2:-0.979962211958;ATF2:-1.04973811408;MYOD1:-1.0942355285;TLX2:-1.16885732192;RORA:-1.22099495908;ZBTB16:-1.31985586848
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11554-120C6;search_select_hide=table117:FF:11554-120C6
}}
}}

Latest revision as of 18:08, 4 June 2020

Name:Fibroblast - skin walker warburg, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11352
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueskin
dev stageNA
sexM
age1 month old neonate
cell typefibroblast
cell lineNA
companyCoriell
collaborationSplicing (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numbercustom
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005209
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11352 CAGE DRX008292 DRR009164
Accession ID Hg19

Library idBAMCTSS
CNhs11352 DRZ000589 DRZ001974
Accession ID Hg38

Library idBAMCTSS
CNhs11352 DRZ011939 DRZ013324
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.0807
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.283
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0.57
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural-0.0296
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.166
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.208
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140.068
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0.305
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.208
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.149
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0.179
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.242
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0.127
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8-0.0343
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.324
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.214
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0.372
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0.068
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0.348
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0.267
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0.372
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0.34
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11352

Jaspar motifP-value
MA0002.20.227
MA0003.10.381
MA0004.10.0413
MA0006.10.0851
MA0007.10.985
MA0009.10.318
MA0014.10.773
MA0017.10.352
MA0018.23.44188e-4
MA0019.10.47
MA0024.10.168
MA0025.10.00832
MA0027.10.32
MA0028.10.685
MA0029.10.247
MA0030.10.0475
MA0031.10.0306
MA0035.20.444
MA0038.10.203
MA0039.20.732
MA0040.10.974
MA0041.10.664
MA0042.10.767
MA0043.12.80858e-5
MA0046.10.368
MA0047.20.159
MA0048.10.0224
MA0050.18.37969e-4
MA0051.10.0151
MA0052.10.203
MA0055.10.032
MA0057.10.0778
MA0058.10.00631
MA0059.10.792
MA0060.10.278
MA0061.10.105
MA0062.20.0591
MA0065.20.679
MA0066.10.272
MA0067.12.59093e-4
MA0068.10.546
MA0069.10.172
MA0070.10.275
MA0071.10.685
MA0072.10.876
MA0073.10.892
MA0074.10.741
MA0076.10.886
MA0077.10.916
MA0078.10.478
MA0079.20.328
MA0080.22.15071e-8
MA0081.10.00252
MA0083.11.09203e-6
MA0084.10.246
MA0087.10.8
MA0088.10.103
MA0090.12.93524e-5
MA0091.10.217
MA0092.10.0466
MA0093.10.0649
MA0099.20.0212
MA0100.10.491
MA0101.10.00273
MA0102.20.0161
MA0103.19.05919e-5
MA0104.20.0295
MA0105.10.826
MA0106.10.0273
MA0107.10.0025
MA0108.21.90973e-5
MA0111.10.0538
MA0112.20.0271
MA0113.10.283
MA0114.10.0893
MA0115.10.339
MA0116.10.473
MA0117.10.718
MA0119.10.438
MA0122.10.278
MA0124.10.378
MA0125.10.493
MA0131.10.581
MA0135.10.464
MA0136.11.64909e-6
MA0137.20.643
MA0138.20.845
MA0139.10.548
MA0140.10.537
MA0141.10.552
MA0142.10.179
MA0143.10.602
MA0144.10.764
MA0145.10.398
MA0146.10.571
MA0147.10.123
MA0148.10.181
MA0149.10.962
MA0150.10.472
MA0152.10.0333
MA0153.10.594
MA0154.10.369
MA0155.10.587
MA0156.10.00183
MA0157.10.161
MA0159.10.53
MA0160.10.0634
MA0162.10.0461
MA0163.10.125
MA0164.10.864
MA0258.10.849
MA0259.10.983



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11352

Novel motifP-value
10.314
100.385
1000.994
1010.459
1020.16
1030.952
1040.922
1050.938
1060.79
1070.45
1080.818
1090.299
110.691
1100.277
1110.341
1120.984
1130.0337
1140.784
1150.583
1160.171
1170.416
1180.745
1190.681
120.851
1200.744
1210.323
1220.775
1231.63445e-5
1240.837
1250.709
1260.398
1270.896
1280.997
1290.962
130.775
1300.0446
1310.46
1320.452
1330.442
1340.28
1350.229
1360.291
1370.26
1380.21
1390.0156
140.274
1400.212
1410.0391
1420.899
1430.583
1440.9
1450.48
1460.888
1470.0974
1480.0844
1490.0842
150.251
1500.362
1510.939
1520.053
1530.868
1540.477
1550.0118
1560.765
1570.0475
1580.00556
1590.522
160.187
1600.303
1610.353
1620.396
1630.866
1640.412
1650.228
1660.0686
1670.186
1680.733
1690.0664
170.714
180.121
190.0269
20.345
200.182
210.162
220.215
230.612
240.975
250.856
260.72
270.71
280.232
290.747
30.98
300.035
310.945
322.1789e-5
330.999
340.66
350.355
360.074
370.229
380.613
390.477
40.495
400.889
410.68
420.951
430.924
440.954
450.437
460.616
470.882
480.843
490.463
50.737
500.262
510.997
520.899
530.381
540.681
550.866
560.93
570.665
580.323
590.0952
60.905
600.562
610.242
620.779
630.559
640.885
650.695
660.224
670.859
680.844
690.434
70.626
700.0388
710.474
720.982
730.0575
740.365
750.715
760.128
770.0128
780.125
790.0659
80.607
800.965
810.882
820.85
830.192
840.494
850.418
860.801
870.178
880.416
890.0758
90.429
900.0564
910.822
920.977
930.183
940.562
950.194
960.64
970.832
980.288
998.93986e-4



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11352


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0002620 (skin fibroblast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0002097 (skin of body)
0002199 (integument)
0002384 (connective tissue)
0000479 (tissue)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003102 (surface structure)
0002416 (integumental system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000057 (fibroblast sample)
0000250 (human fibroblast of skin sample)
0000001 (sample)
0000252 (human fibroblast - skin walker warburg sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)

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