FF:11910-125G2: Difference between revisions
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{{f5samples | {{f5samples | ||
| | |DRA_sample_Accession=CAGE@SAMD00004844 | ||
| | |accession_numbers=CAGE;DRX008167;DRR009039;DRZ000464;DRZ001849;DRZ011814;DRZ013199 | ||
| | |ancestors_in_anatomy_facet= | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
| | |ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0011111 | ||
|comment= | |||
|created_by= | |||
|creation_date= | |||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |||
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.82!667.01!PLEK;;chr11:47400078..47400106,-!p1@SPI1!2.63!430.10!SPI1;;chr12:54778471..54778528,-!p1@ZNF385A!2.33!214.89!ZNF385A;;chr16:85932760..85932775,+!p1@IRF8!2.30!196.25!IRF8;;chr7:115670804..115670825,-!p1@TFEC!2.12!130.03!TFEC;;chr7:50344289..50344323,+!p1@IKZF1!1.97!92.58!IKZF1;;chr11:47400062..47400077,-!p2@SPI1!1.87!73.13!SPI1;;chr14:75745523..75745537,+!p1@FOS!1.84!7582.23!FOS;;chr12:54694758..54694805,-!p1@NFE2!1.83!79.72!NFE2;;chr2:145277640..145277771,-!p1@ZEB2!1.75!690.64!ZEB2;;chr5:88178983..88179012,-!p1@MEF2C!1.71!365.33!MEF2C;;chr20:39317868..39317884,-!p1@MAFB!1.70!545.50!MAFB;;chr11:47399996..47400014,-!p4@SPI1!1.58!36.65!SPI1;;chr10:51572408..51572454,+!p3@NCOA4!1.53!183.39!NCOA4;;chr6:144385698..144385742,-!p2@PLAGL1!1.53!39.38!PLAGL1;;chr11:47399947..47399961,-!p3@SPI1!1.53!32.95!SPI1;;chr7:28725740..28725778,+!p1@CREB5!1.51!267.29!CREB5;;chr11:47400032..47400043,-!p5@SPI1!1.49!30.22!SPI1;;chr2:68592394..68592405,+!p2@PLEK!1.46!27.81!PLEK;;chr7:28725715..28725727,+!p3@CREB5!1.41!28.93!CREB5;;chr2:157189180..157189290,-!p1@NR4A2!1.40!120.54!NR4A2;;chr11:47400045..47400060,-!p6@SPI1!1.40!24.27!SPI1;;chr19:45971246..45971265,+!p1@FOSB!1.37!403.10!FOSB;;chr4:106068026..106068084,+!p1@TET2!1.36!190.94!TET2;;chr19:42636586..42636607,-!p1@POU2F2!1.36!59.63!POU2F2;;chr21:34442439..34442455,+!p1@OLIG1!1.36!22.02!OLIG1;;chrY:21906594..21906622,-!p1@KDM5D!1.35!21.22!KDM5D;;chr11:128563948..128564003,+!p1@FLI1!1.31!226.94!FLI1;;chr2:70142232..70142251,+!p1@MXD1!1.31!106.88!MXD1;;chr2:61108695..61108753,+!p1@REL!1.30!127.13!REL;;chr13:41593425..41593480,-!p1@ELF1!1.30!118.78!ELF1;;chr7:149470641..149470694,-!p1@ZNF467!1.30!84.38!ZNF467;;chr5:88179017..88179046,-!p2@MEF2C!1.29!73.13!MEF2C;;chr7:50343634..50343717,+!p2@IKZF1!1.28!18.16!IKZF1;;chr12:54778351..54778378,-!p6@ZNF385A!1.28!18.00!ZNF385A;;chr10:31288398..31288455,-!p2@ZNF438!1.25!19.45!ZNF438;;chr19:33793430..33793447,-!p1@CEBPA!1.24!67.99!CEBPA;;chr12:54694807..54694832,-!p3@NFE2!1.23!16.07!NFE2;;chr9:110252035..110252057,-!p1@KLF4!1.19!226.94!KLF4;;chr21:36421535..36421610,-!p2@RUNX1!1.18!50.15!RUNX1;;chr19:12902289..12902307,+!p1@JUNB!1.16!3029.36!JUNB;;chr9:117150254..117150271,-!p1@AKNA!1.16!37.13!AKNA;;chr2:28618532..28618610,+!p4@FOSL2!1.16!22.98!FOSL2;;chr7:128577972..128578047,+!p1@IRF5!1.16!21.22!IRF5;;chr20:56195474..56195506,-!p1@ZBP1!1.16!13.50!ZBP1;;chr7:137620684..137620711,-!p4@CREB3L2!1.16!13.34!CREB3L2;;chr10:94449703..94449718,+!p1@HHEX!1.15!50.31!HHEX;;chr2:208031943..208031978,-!p5@KLF7!1.15!17.52!KLF7;;chr4:185395633..185395651,-!p2@IRF2!1.14!20.57!IRF2;;chr1:158979872..158979898,+!p3@IFI16!1.12!37.29!IFI16;;chr2:145277882..145277967,-!p3@ZEB2!1.11!20.41!ZEB2;;chr6:15246200..15246214,+!p2@JARID2!1.10!32.31!JARID2;;chr10:51572339..51572376,+!p4@NCOA4!1.10!26.36!NCOA4;;chr9:110250697..110250738,-!p2@KLF4!1.10!13.50!KLF4;;chr6:15246261..15246312,+!p1@JARID2!1.09!272.75!JARID2;;chr3:101546827..101546847,+!p2@NFKBIZ!1.09!16.07!NFKBIZ;;chr8:71316428..71316459,-!p2@NCOA2!1.08!18.48!NCOA2;;chr6:391743..391759,+!p1@IRF4!1.08!11.09!IRF4;;chr19:45251395..45251432,+!p8@BCL3!1.08!11.09!BCL3;;chr2:231090433..231090469,+!p1@SP140!1.08!11.09!SP140;;chr2:238600933..238600985,+!p3@LRRFIP1!1.07!58.66!LRRFIP1;;chr6:106534192..106534224,+!p1@PRDM1!1.07!30.70!PRDM1;;chr14:35872962..35873025,-!p3@NFKBIA!1.05!26.04!NFKBIA;;chr1:40367530..40367597,-!p1@MYCL1!1.05!18.64!MYCL1;;chr4:185395590..185395627,-!p3@IRF2!1.05!12.86!IRF2;;chr17:38497662..38497713,+!p4@RARA!1.05!12.05!RARA;;chr1:156470515..156470542,-!p2@MEF2D!1.04!53.20!MEF2D;;chr1:158979851..158979865,+!p5@IFI16!1.03!21.86!IFI16;;chr5:88179195..88179224,-!p3@MEF2C!1.03!15.43!MEF2C;;chr12:72056800..72056834,+!p1@THAP2!1.03!13.34!THAP2;;chr19:13213662..13213686,-!p1@LYL1!1.01!13.82!LYL1;;chr19:50432132..50432217,+!p2@ATF5!1.01!11.09!ATF5;;chr3:101568349..101568365,+!p1@NFKBIZ!1.00!475.10!NFKBIZ;;chr2:231084659..231084721,-!p1@SP110!1.00!215.05!SP110;;chr10:3827371..3827386,-!p2@KLF6!1.00!77.31!KLF6;;chr6:44233252..44233296,-!p1@NFKBIE!0.99!88.08!NFKBIE;;chr14:35873947..35873965,-!p1@NFKBIA!0.98!550.00!NFKBIA;;chr5:131826457..131826514,-!p1@IRF1!0.98!341.54!IRF1;;chr14:75988771..75988826,+!p1@BATF!0.98!11.57!BATF;;chr4:38665769..38665801,+!p2@KLF3!0.96!75.54!KLF3;;chr8:103667935..103667960,-!p1@KLF10!0.95!364.04!KLF10;;chr16:31885093..31885165,+!p1@ZNF267!0.95!125.69!ZNF267;;chr12:54694738..54694749,-!p5@NFE2!0.95!7.88!NFE2;;chr13:41593392..41593403,-!p7@ELF1!0.95!7.88!ELF1;;chr14:45722360..45722415,-!p1@MIS18BP1!0.94!125.69!MIS18BP1;;chr12:11802753..11802834,+!p2@ETV6!0.94!39.54!ETV6;;chr20:48807430..48807439,+!p8@CEBPB!0.94!11.89!CEBPB;;chr16:88752889..88752921,-!p1@SNAI3!0.94!9.16!SNAI3;;chr3:187463248..187463264,-!p1@BCL6!0.93!166.99!BCL6;;chr20:48807456..48807475,+!p3@CEBPB!0.93!14.95!CEBPB;;chr9:110252074..110252079,-!p3@KLF4!0.93!12.70!KLF4;;chr7:137620650..137620677,-!p3@CREB3L2!0.93!7.55!CREB3L2;;chr21:30672433..3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| |||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
Line 66: | Line 41: | ||
|fonse_treatment= | |fonse_treatment= | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|is_a=EFO:0002091;;FF: | |hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor3.CNhs13540.11910-125G2.hg19.nobarcode.bam | ||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor3.CNhs13540.11910-125G2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor3.CNhs13540.11910-125G2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor3.CNhs13540.11910-125G2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252bCD16-%2520Monocytes%252c%2520donor3.CNhs13540.11910-125G2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11910-125G2 | |||
|is_a=EFO:0002091;;FF:0011111 | |||
|is_obsolete= | |||
|library_id=CNhs13540 | |||
|library_id_phase_based=2:CNhs13540 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11910 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11910 | |||
|name=CD14+CD16- Monocytes, donor3 | |||
|namespace= | |namespace= | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |||
|profile_hcage=CNhs13540,LSID1029,release012,COMPLETED | |||
|profile_rnaseq= | |||
|profile_srnaseq=,,, | |||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0.194275297657708,0,0,0,0,0.0552937198907519,0,0.183592842341489,-0.250038781573136,0,0,0,0,0,0,0,0,0,0.0647295580076124,0.0647295580076124,0,0,-0.153323010348428,0,0,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0.00126276016004716,0,0,0,0.12105112091666,0,0,-0.103422112160925,0,0,0,0,0,0,0.0647295580076124,0,-0.0242150211128343,0,0,0,0.48987872875784,0,-0.0839305477320758,0.0647295580076124,-0.0322628032349928,0,0,-0.097343627213097,0,0.489290216820286,0,0,0,0,0.0647295580076124,0,0,0,1.04000809637187,0,0,0.51190450242199,0,0,0,0,0.0928903394621362,0,0,0.0025400237408629,0,0,-0.61448815919137,0.0323647790038062,0,0,0.00628273119578716,-0.1033915277073,0.0323647790038062,0,0.06052556045833,0,0.195184298225585,-0.0779516403425655,0,0,0,0,0,0.0323647790038062,0,0,0,0,0,0,0,0,0,0,0,0.011432281066108,0.12105112091666,0,0,0,0.166289790800521,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.195184298225585,0,0,0.0647295580076124,0,0.12105112091666,0,0.0647295580076124,0,0,0,0,-0.0762788758564094,0,-0.303186219322853,0.183859958941359,0.06052556045833,0.416183653401086,-0.263591536177155,0,0.215611749977138,0,0,0.215611749977138,0,0.12105112091666,0.12105112091666,0,-0.128119866952565,0.0647295580076124,-0.0504125515893149,0,0.0647295580076124,0,0,-0.0186252810838506,0.266508383481084,0.0647295580076124,0.0200172365081981,-0.0683442610773682,0,0,0,0,-0.162434794345755,0,0.0500205156354145,0.244654933141414,0,-0.498533465455138,0.271662604683649,0,0,0,-0.396040289933153,-0.847478913963733,0,0,-0.061254291293544,0.575678021852255,0,0,-0.391044581551635,0,-0.26037046871688,0.0576635372758622,0,-0.0343852178694004,0.0647295580076124,0,0.0647295580076124,0,0.0323647790038062,0,0,0,0,0,0,0.0353968726406995,-0.0708416439052543,0.00919104227239065,0,0,0,-0.291998713820769,0,0,-0.157674405979429,-0.286006455289246,0.0725164231692925,-0.31633434638388,0,1.01837893590392,0.0404301127087115,0.319122556812188,0.0112549909019539,-0.147401849371139,-0.189981719549847,-0.0363498712636692,-0.43115773348819,-0.370088975712926,0.0267430044387008,-0.0246115277088605,-0.055911994528296,-0.78924533240003,-0.261817146392687,0,0,-0.0678387073135782,-0.193163172857938,0,0,0.0217897879452168,0.054670487267151,-0.449905848532175,0.15798138068683,-0.423154740920371,0.312908624277888,-0.0395325284566706,0.150424381366325,-0.101662386731404,-0.4215723249037,-0.0551340163147288,0,0,-0.065507790489769,-0.296033378349483,0.942869242191362,-0.0492730865011328,0.501861179983996,0.0527068598392916,0,-0.406476069321233,-0.152311214646107,0,0,0.107627896548654,0,0,0,0,0,-0.206496442797661,0.10150947187068,0.155695033759871,0,-0.0273643965097388,-0.161514957251671,-0.189480205364017,0,0.214753198663716,0,0.0293009491035386,-0.077022054619098,0,-0.160335097378833,-0.206783140190274,-0.0439395754223429,-0.422394805391737,0.00628273119578716,0.411230094134477,0.102165705223033,-0.267316032819552,0.174706554096695,-0.275752932992257,-0.0233972744676754,0,-0.76249362960172,0.819334109615994,0.00358567681240407,-0.583529904229572,0,0.183145165222571,0,0.183729663194614,0.0246737731773533,-0.0803537592779688,-0.247214102009949,0.151001785085845,0.686733031809085,0,-0.402426502204982,-0.788130937773974,0,-0.101484373742825,-0.0154750736960562,0,-0.085637525327027,-0.697695966512583,0.687961667234215,-0.138989456679195,0,-0.790080158389657,0,0,-0.184455451222729,-0.114424916847729,0.0647295580076124,0.0219899509046206,0.0625888425189498,0.0524534532774602,0.00508004748172579,0,0,-0.645700337992725,0,0,-0.60592806381803,-0.0636048451378017,-0.619783323958633,0.43307878593331,0,-0.0480972489959255,0,0,0.181511354177417,0.0647295580076124,0.181569015510845,0.0180853066778606,0.359039120142592,-0.217516517595018,0,0,0.194275297657708,0,0,0,-0.0332903480960052,0,0,0,0,0,-0.120762645786755,-0.354833330216448,0,-0.142367034188408,0,0,0,0,0,-0.0298668848730401,0,0,-1.37671908884254,-0.112523630098132,-0.0582878576688079,0,0,0.0647295580076124,0,-0.215723402553475,0.238926613792351,0.12105112091666,0.16135694296566,0,0,0,0,0.129470760187927,0,0,0,0.0854499997145775,0.0633206638629958,-0.151643485552627,0,0,0,-0.155903280685131,0.0647295580076124,0,0,0,0.25008534529295,0,0,0.0672030382402169,0,0.190965658547465,-0.0815818795468414,0,-0.0731718664902666,-0.183653014597289,-0.982245239183631,0,0,0.0318725176734038,0,0,0.0227535504285947,0,0,0,0,0,0,0,0.0686173664309615,0.12105112091666,-0.214314512399756,0,0,0,0,0,0.0647295580076124,0,0,0,0,0,0.167363112138141,-0.027494498650898,-0.0640596705171081,0,0,0,0,0,0,-0.0241060230789031,-0.212217644737923,0,0,0,0,0,0,0,0,-0.40669638165563,0,0,0.170899999429155,0,0,-0.0322628032349928,0,0,0,0.388550595315416,-0.500077563146271,0,0.0647295580076124,0.312929027473017,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0585895280278354,0.183592842341489,0,0.0647295580076124,0,0,0,0,0,-0.153782177289431,0,0,0,0,1.64513858196356,0,0,0,-0.0400668267815441,0,0.0552937198907519,0,0,0,0,0,0.0647295580076124,0.0323647790038062,0,0,0,0.442163175887075,0,0,0,0,0,0,0,0,0,0,-0.398981942650576,0,0,-0.0612047163689903,0,0,-0.232628352633041,0,0,0,0,0,0,0.00102435497527912,0,0,0,0,0,0,0.0647295580076124,0,0.0323647790038062,0.641001614900846,0,0.0647295580076124,0.0928903394621362,0,0,0,0,0,0.12105112091666,0,0,0.12105112091666,0,0,0,0.0706278576352025,0,0,0,0,0,0,0,-0.0979578962680575,0,0,0.392490994768624,0,0,0,0,0,0,-0.255612061652904,-0.283220399823148,-0.176824677062489,0,0,0,-0.054385572482455,0.48987872875784,0,-0.132064599242404,0.0647295580076124,-0.0667773874189013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0.0323647790038062,0,0,0,0,0.097119634620022,0,0.0323647790038062,0,0,0,0,0.340885122389354,0,0,0,0,0,0,0,0,0,0,0,0.0323647790038062,0,0,0,0.12105112091666,0.134320072171482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,0.002525520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| |||
|rna_box=125 | |||
|rna_catalog_number= | |||
|rna_concentration=0.03947 | |||
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0 | |||
|rna_lot_number=41-42 | |||
|rna_od260/230=0.83 | |||
|rna_od260/280=2.05 | |||
|rna_position=G2 | |||
|rna_rin= | |||
|rna_sample_type=total RNA | |||
|rna_tube_id=125G2 | |||
|rna_weight_ug=0.3947 | |||
|sample_age=23 | |||
|sample_category=primary cells | |||
|sample_cell_catalog= | |||
|sample_cell_line= | |||
|sample_cell_lot= | |||
|sample_cell_type=monocyte | |||
|sample_collaboration=Michael Rehli (University of Regensberg) | |||
|sample_company= | |||
|sample_description= | |||
|sample_dev_stage= | |||
|sample_disease= | |||
|sample_donor(cell lot)= | |||
|sample_ethnicity= | |||
|sample_experimental_condition= | |||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;4.38544538284048e-219!GO:0043227;membrane-bound organelle;2.42883007160413e-161!GO:0043231;intracellular membrane-bound organelle;5.65025179683692e-161!GO:0043226;organelle;1.61727633182503e-149!GO:0043229;intracellular organelle;1.11861093311455e-148!GO:0005737;cytoplasm;1.8599956880687e-137!GO:0044444;cytoplasmic part;9.8438341012642e-95!GO:0044422;organelle part;1.73692729655887e-92!GO:0044446;intracellular organelle part;8.93850240386504e-91!GO:0044237;cellular metabolic process;2.31354123773943e-82!GO:0043170;macromolecule metabolic process;1.48619901016236e-81!GO:0044238;primary metabolic process;5.91902513131511e-80!GO:0032991;macromolecular complex;1.82773425227404e-72!GO:0005634;nucleus;6.20697952290208e-72!GO:0003723;RNA binding;6.19200555617904e-71!GO:0044428;nuclear part;2.02521925442932e-63!GO:0030529;ribonucleoprotein complex;7.48946404001861e-63!GO:0043233;organelle lumen;1.76826623547112e-57!GO:0031974;membrane-enclosed lumen;1.76826623547112e-57!GO:0005515;protein binding;6.67533855388724e-55!GO:0043283;biopolymer metabolic process;7.15476107301447e-50!GO:0033036;macromolecule localization;2.99504285332303e-49!GO:0019538;protein metabolic process;8.84176129111508e-48!GO:0010467;gene expression;2.35081246854064e-47!GO:0015031;protein transport;5.23419023078596e-47!GO:0045184;establishment of protein localization;1.3867377143231e-46!GO:0006412;translation;9.49442112457258e-46!GO:0008104;protein localization;4.2222994280635e-45!GO:0044260;cellular macromolecule metabolic process;1.31755302023086e-44!GO:0044267;cellular protein metabolic process;1.48103785888247e-44!GO:0006396;RNA processing;4.00057507167036e-44!GO:0005739;mitochondrion;4.74496177971757e-43!GO:0031981;nuclear lumen;1.66001726483024e-41!GO:0016071;mRNA metabolic process;1.35465983742043e-40!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.03541013799355e-39!GO:0031090;organelle membrane;7.82574129463841e-37!GO:0043234;protein complex;1.78856207348276e-36!GO:0008380;RNA splicing;3.61102760745347e-36!GO:0009059;macromolecule biosynthetic process;3.22267855613211e-35!GO:0006397;mRNA processing;8.44177177431651e-35!GO:0005829;cytosol;1.73610276515099e-33!GO:0005840;ribosome;4.9467356673854e-32!GO:0006886;intracellular protein transport;3.3724671517093e-31!GO:0031967;organelle envelope;6.68545495260137e-31!GO:0031975;envelope;1.35694214364969e-30!GO:0046907;intracellular transport;1.72331953156396e-30!GO:0044429;mitochondrial part;2.33474175855151e-30!GO:0009058;biosynthetic process;3.71500947701039e-30!GO:0016043;cellular component organization and biogenesis;1.02758783403897e-29!GO:0044249;cellular biosynthetic process;2.69339331839023e-29!GO:0005654;nucleoplasm;6.7567212732048e-29!GO:0003676;nucleic acid binding;7.11877799283743e-29!GO:0003735;structural constituent of ribosome;3.68145407702529e-28!GO:0065003;macromolecular complex assembly;3.98790001956381e-26!GO:0033279;ribosomal subunit;5.49522612363988e-26!GO:0005681;spliceosome;6.4956415849976e-26!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.36133335231727e-25!GO:0016070;RNA metabolic process;2.81012690913209e-24!GO:0044451;nucleoplasm part;1.80312636867281e-23!GO:0051649;establishment of cellular localization;2.17298458037079e-23!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.64652644615356e-23!GO:0000166;nucleotide binding;7.21752627643268e-23!GO:0051641;cellular localization;7.75960242330524e-23!GO:0022607;cellular component assembly;1.5744720690626e-21!GO:0012501;programmed cell death;2.70639731664233e-21!GO:0006915;apoptosis;3.00219626126477e-21!GO:0005740;mitochondrial envelope;3.71243954297196e-21!GO:0031966;mitochondrial membrane;3.21059159077498e-20!GO:0022618;protein-RNA complex assembly;5.06522807434529e-20!GO:0008219;cell death;6.64026145197721e-20!GO:0016265;death;6.64026145197721e-20!GO:0019866;organelle inner membrane;9.52581673067172e-20!GO:0044445;cytosolic part;1.23890696076317e-19!GO:0006512;ubiquitin cycle;2.0364421819214e-19!GO:0008134;transcription factor binding;5.84912367081287e-19!GO:0006259;DNA metabolic process;8.64908672385429e-19!GO:0043412;biopolymer modification;9.45050457034557e-19!GO:0006119;oxidative phosphorylation;1.34843121445279e-18!GO:0006996;organelle organization and biogenesis;2.33838618939144e-18!GO:0044265;cellular macromolecule catabolic process;3.4321239665651e-18!GO:0016604;nuclear body;2.43003482369892e-17!GO:0005743;mitochondrial inner membrane;3.1700674220276e-17!GO:0006605;protein targeting;1.00550153604514e-16!GO:0016874;ligase activity;1.00550153604514e-16!GO:0016192;vesicle-mediated transport;1.82201721671037e-16!GO:0006464;protein modification process;2.17852855231984e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.61240716735704e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;3.06476257583712e-16!GO:0016462;pyrophosphatase activity;3.25263977484304e-16!GO:0017111;nucleoside-triphosphatase activity;6.05798479964252e-16!GO:0032553;ribonucleotide binding;1.3964552199477e-15!GO:0032555;purine ribonucleotide binding;1.3964552199477e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;2.14001313791968e-15!GO:0019941;modification-dependent protein catabolic process;2.42379672568888e-15!GO:0043632;modification-dependent macromolecule catabolic process;2.42379672568888e-15!GO:0008135;translation factor activity, nucleic acid binding;2.65568682049003e-15!GO:0017076;purine nucleotide binding;2.71653439162508e-15!GO:0016607;nuclear speck;2.90957947905879e-15!GO:0006913;nucleocytoplasmic transport;3.48624588620658e-15!GO:0044257;cellular protein catabolic process;3.56190513926068e-15!GO:0006511;ubiquitin-dependent protein catabolic process;3.88487064101785e-15!GO:0051169;nuclear transport;6.8148528279912e-15!GO:0043687;post-translational protein modification;9.35740629760284e-15!GO:0044455;mitochondrial membrane part;9.7542859813722e-15!GO:0043285;biopolymer catabolic process;1.12998264581089e-14!GO:0044248;cellular catabolic process;1.47929460323821e-14!GO:0006413;translational initiation;6.11781299781182e-14!GO:0015935;small ribosomal subunit;6.29527460806814e-14!GO:0006457;protein folding;1.15086294761097e-13!GO:0042981;regulation of apoptosis;1.25428568801126e-13!GO:0009057;macromolecule catabolic process;1.32478834464411e-13!GO:0003743;translation initiation factor activity;1.33840417871659e-13!GO:0048770;pigment granule;1.54806520676348e-13!GO:0042470;melanosome;1.54806520676348e-13!GO:0043067;regulation of programmed cell death;2.23003785149654e-13!GO:0015934;large ribosomal subunit;6.97971265892273e-13!GO:0005730;nucleolus;7.67164321032177e-13!GO:0000502;proteasome complex (sensu Eukaryota);8.29819470116907e-13!GO:0050794;regulation of cellular process;1.24517489858651e-12!GO:0012505;endomembrane system;1.36164843897236e-12!GO:0005524;ATP binding;2.21584163730383e-12!GO:0032559;adenyl ribonucleotide binding;2.564716996548e-12!GO:0003712;transcription cofactor activity;3.45807156715338e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.48660122195667e-12!GO:0005773;vacuole;4.32197811967084e-12!GO:0030554;adenyl nucleotide binding;5.9214044508523e-12!GO:0005794;Golgi apparatus;8.72002706637447e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;1.00260150172577e-11!GO:0000375;RNA splicing, via transesterification reactions;1.00260150172577e-11!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.00260150172577e-11!GO:0005768;endosome;1.01320398367067e-11!GO:0051186;cofactor metabolic process;1.04224741736717e-11!GO:0006446;regulation of translational initiation;1.12970392879937e-11!GO:0005746;mitochondrial respiratory chain;1.3422201488359e-11!GO:0031980;mitochondrial lumen;1.92944440338849e-11!GO:0005759;mitochondrial matrix;1.92944440338849e-11!GO:0007243;protein kinase cascade;2.40649508120838e-11!GO:0006974;response to DNA damage stimulus;3.18758765203557e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.8589207642676e-11!GO:0000323;lytic vacuole;3.90822783976215e-11!GO:0005764;lysosome;3.90822783976215e-11!GO:0006793;phosphorus metabolic process;6.11539612773429e-11!GO:0006796;phosphate metabolic process;6.11539612773429e-11!GO:0030163;protein catabolic process;6.84973297342252e-11!GO:0050136;NADH dehydrogenase (quinone) activity;9.03873042575687e-11!GO:0003954;NADH dehydrogenase activity;9.03873042575687e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.03873042575687e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;9.84925469071532e-11!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.10617885979979e-10!GO:0016787;hydrolase activity;1.10920273347783e-10!GO:0006325;establishment and/or maintenance of chromatin architecture;1.12802744364331e-10!GO:0042623;ATPase activity, coupled;1.18791704020326e-10!GO:0043228;non-membrane-bound organelle;1.21208701654377e-10!GO:0043232;intracellular non-membrane-bound organelle;1.21208701654377e-10!GO:0017038;protein import;1.26579712375401e-10!GO:0016887;ATPase activity;1.31825969994681e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.52223166422451e-10!GO:0051246;regulation of protein metabolic process;1.64181946085278e-10!GO:0008639;small protein conjugating enzyme activity;3.34199241386185e-10!GO:0004386;helicase activity;3.73626218282385e-10!GO:0006323;DNA packaging;3.93553027174066e-10!GO:0048193;Golgi vesicle transport;4.81920143404824e-10!GO:0016568;chromatin modification;4.86986535423252e-10!GO:0019222;regulation of metabolic process;5.57683311041028e-10!GO:0004842;ubiquitin-protein ligase activity;6.4106680061369e-10!GO:0050657;nucleic acid transport;6.46463925562182e-10!GO:0051236;establishment of RNA localization;6.46463925562182e-10!GO:0050658;RNA transport;6.46463925562182e-10!GO:0008026;ATP-dependent helicase activity;6.71765556692068e-10!GO:0005635;nuclear envelope;7.61999209601906e-10!GO:0006732;coenzyme metabolic process;8.53971372774734e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;9.62067257368625e-10!GO:0006403;RNA localization;9.69219766366535e-10!GO:0042775;organelle ATP synthesis coupled electron transport;9.82667877224054e-10!GO:0042773;ATP synthesis coupled electron transport;9.82667877224054e-10!GO:0019787;small conjugating protein ligase activity;1.51157844204901e-09!GO:0065009;regulation of a molecular function;1.53520463995502e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.37102734972744e-09!GO:0030964;NADH dehydrogenase complex (quinone);2.3993603128664e-09!GO:0045271;respiratory chain complex I;2.3993603128664e-09!GO:0005747;mitochondrial respiratory chain complex I;2.3993603128664e-09!GO:0044453;nuclear membrane part;3.06855560436488e-09!GO:0016310;phosphorylation;3.29385257114127e-09!GO:0006366;transcription from RNA polymerase II promoter;3.67618312148143e-09!GO:0048523;negative regulation of cellular process;3.77119799943436e-09!GO:0051170;nuclear import;4.07131872276481e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.25591804961068e-09!GO:0051082;unfolded protein binding;5.04625865328002e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.15463522948224e-09!GO:0005783;endoplasmic reticulum;5.51247437540746e-09!GO:0003713;transcription coactivator activity;6.02035678358864e-09!GO:0050789;regulation of biological process;6.16914759345812e-09!GO:0006281;DNA repair;6.53908738102737e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;6.81482252548191e-09!GO:0006606;protein import into nucleus;6.81482252548191e-09!GO:0031965;nuclear membrane;6.81482252548191e-09!GO:0043069;negative regulation of programmed cell death;7.54966346834268e-09!GO:0051276;chromosome organization and biogenesis;7.98584404616181e-09!GO:0043066;negative regulation of apoptosis;9.03187266132766e-09!GO:0008565;protein transporter activity;1.0613518454497e-08!GO:0019829;cation-transporting ATPase activity;1.25788153655389e-08!GO:0006417;regulation of translation;1.81192459629245e-08!GO:0007049;cell cycle;1.86487825988941e-08!GO:0009056;catabolic process;2.23663610794567e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.3711523119252e-08!GO:0051028;mRNA transport;2.52449453866564e-08!GO:0007242;intracellular signaling cascade;2.58006170533519e-08!GO:0015986;ATP synthesis coupled proton transport;2.6023790028974e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.6023790028974e-08!GO:0031323;regulation of cellular metabolic process;3.49458825334516e-08!GO:0009259;ribonucleotide metabolic process;3.59959150388546e-08!GO:0006163;purine nucleotide metabolic process;4.01718471275667e-08!GO:0006164;purine nucleotide biosynthetic process;5.19128751679568e-08!GO:0009150;purine ribonucleotide metabolic process;5.21539522850236e-08!GO:0015078;hydrogen ion transmembrane transporter activity;5.72032626756784e-08!GO:0009152;purine ribonucleotide biosynthetic process;6.21956215753556e-08!GO:0016881;acid-amino acid ligase activity;7.50547416571487e-08!GO:0005643;nuclear pore;8.21310183259956e-08!GO:0009260;ribonucleotide biosynthetic process;9.42196251314389e-08!GO:0048519;negative regulation of biological process;1.19805091994039e-07!GO:0065002;intracellular protein transport across a membrane;1.22045645573554e-07!GO:0005770;late endosome;1.31824230405187e-07!GO:0044432;endoplasmic reticulum part;1.32904046189079e-07!GO:0008047;enzyme activator activity;1.47447948159505e-07!GO:0006916;anti-apoptosis;1.70007310342215e-07!GO:0006950;response to stress;1.78356591473286e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.9170128726025e-07!GO:0009615;response to virus;1.94703141997805e-07!GO:0006461;protein complex assembly;1.97622255971072e-07!GO:0006754;ATP biosynthetic process;2.34915036246965e-07!GO:0006753;nucleoside phosphate metabolic process;2.34915036246965e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.35820361784745e-07!GO:0042254;ribosome biogenesis and assembly;2.4351335927937e-07!GO:0043566;structure-specific DNA binding;2.62152833552974e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;3.08238676561005e-07!GO:0031324;negative regulation of cellular metabolic process;3.67616170947233e-07!GO:0031326;regulation of cellular biosynthetic process;4.10421390791515e-07!GO:0009719;response to endogenous stimulus;4.59084174988775e-07!GO:0016564;transcription repressor activity;5.24323704753615e-07!GO:0009142;nucleoside triphosphate biosynthetic process;5.25386784914846e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.25386784914846e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.32369609274608e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.32369609274608e-07!GO:0051726;regulation of cell cycle;6.66512845547451e-07!GO:0051188;cofactor biosynthetic process;6.74847379929292e-07!GO:0016563;transcription activator activity;7.4958924552068e-07!GO:0009060;aerobic respiration;7.90037208782871e-07!GO:0046034;ATP metabolic process;8.62268932222313e-07!GO:0005761;mitochondrial ribosome;8.92227712338835e-07!GO:0000313;organellar ribosome;8.92227712338835e-07!GO:0010468;regulation of gene expression;9.08142047450773e-07!GO:0000074;regulation of progression through cell cycle;9.65941219470478e-07!GO:0009199;ribonucleoside triphosphate metabolic process;1.01683624084172e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.06408173836917e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.06408173836917e-06!GO:0044440;endosomal part;1.14184161102887e-06!GO:0010008;endosome membrane;1.14184161102887e-06!GO:0046930;pore complex;1.29502500190551e-06!GO:0032446;protein modification by small protein conjugation;1.64790172799099e-06!GO:0065007;biological regulation;1.67292291519674e-06!GO:0003697;single-stranded DNA binding;1.8088475409911e-06!GO:0050790;regulation of catalytic activity;1.81260105553142e-06!GO:0009889;regulation of biosynthetic process;1.91762760192954e-06!GO:0048475;coated membrane;2.13378350465893e-06!GO:0030117;membrane coat;2.13378350465893e-06!GO:0005793;ER-Golgi intermediate compartment;2.25250970037205e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.27437242892372e-06!GO:0009141;nucleoside triphosphate metabolic process;2.35080778512954e-06!GO:0006399;tRNA metabolic process;2.3984160772502e-06!GO:0009055;electron carrier activity;2.83676609135427e-06!GO:0005839;proteasome core complex (sensu Eukaryota);2.96618242354738e-06!GO:0009967;positive regulation of signal transduction;3.25082047022552e-06!GO:0016567;protein ubiquitination;3.38307929263162e-06!GO:0045786;negative regulation of progression through cell cycle;3.47087429958703e-06!GO:0045333;cellular respiration;4.07758036008562e-06!GO:0030120;vesicle coat;4.12133861586404e-06!GO:0030662;coated vesicle membrane;4.12133861586404e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.30843176924527e-06!GO:0009108;coenzyme biosynthetic process;4.31776067769135e-06!GO:0006401;RNA catabolic process;4.41598267817444e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;5.41837032293717e-06!GO:0019899;enzyme binding;5.83412720416699e-06!GO:0006888;ER to Golgi vesicle-mediated transport;6.0704404223932e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;6.09620759706344e-06!GO:0000245;spliceosome assembly;6.81568811223912e-06!GO:0016740;transferase activity;8.14473847577888e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.67209206650734e-06!GO:0043065;positive regulation of apoptosis;8.80634568049666e-06!GO:0030532;small nuclear ribonucleoprotein complex;9.0484798480689e-06!GO:0006350;transcription;9.87859794603667e-06!GO:0005774;vacuolar membrane;1.03712984765175e-05!GO:0009892;negative regulation of metabolic process;1.04881586110304e-05!GO:0005789;endoplasmic reticulum membrane;1.06741492646914e-05!GO:0016481;negative regulation of transcription;1.15657470185522e-05!GO:0003724;RNA helicase activity;1.19518744904692e-05!GO:0004298;threonine endopeptidase activity;1.21045923920744e-05!GO:0043068;positive regulation of programmed cell death;1.21324623574549e-05!GO:0016779;nucleotidyltransferase activity;1.2338590123976e-05!GO:0051168;nuclear export;1.29879577040574e-05!GO:0051336;regulation of hydrolase activity;1.47655655349207e-05!GO:0006752;group transfer coenzyme metabolic process;1.47655655349207e-05!GO:0045259;proton-transporting ATP synthase complex;1.65621898231241e-05!GO:0048522;positive regulation of cellular process;1.78166471941445e-05!GO:0007264;small GTPase mediated signal transduction;1.79212523652756e-05!GO:0005096;GTPase activator activity;2.10201688769764e-05!GO:0022402;cell cycle process;2.15602230430917e-05!GO:0000151;ubiquitin ligase complex;2.26370454915092e-05!GO:0006613;cotranslational protein targeting to membrane;2.80144360124191e-05!GO:0006099;tricarboxylic acid cycle;2.84976990722293e-05!GO:0046356;acetyl-CoA catabolic process;2.84976990722293e-05!GO:0005525;GTP binding;3.1561180704459e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;3.2635309659982e-05!GO:0044437;vacuolar part;3.67334444028748e-05!GO:0016197;endosome transport;3.70418647042535e-05!GO:0006917;induction of apoptosis;3.81558702627888e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.84533423261966e-05!GO:0004812;aminoacyl-tRNA ligase activity;3.84533423261966e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.84533423261966e-05!GO:0006333;chromatin assembly or disassembly;4.33265159844152e-05!GO:0016072;rRNA metabolic process;4.67555206775193e-05!GO:0031252;leading edge;5.01011641520854e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.09724946946363e-05!GO:0043038;amino acid activation;5.24441907203942e-05!GO:0006418;tRNA aminoacylation for protein translation;5.24441907203942e-05!GO:0043039;tRNA aminoacylation;5.24441907203942e-05!GO:0003924;GTPase activity;5.3900611498845e-05!GO:0012502;induction of programmed cell death;5.60162305864661e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.6646490613742e-05!GO:0005798;Golgi-associated vesicle;6.09709149815251e-05!GO:0005765;lysosomal membrane;6.10178779710611e-05!GO:0051187;cofactor catabolic process;6.33072237473418e-05!GO:0006364;rRNA processing;6.34689041850943e-05!GO:0006402;mRNA catabolic process;6.53750908923702e-05!GO:0006084;acetyl-CoA metabolic process;6.54232007471411e-05!GO:0004674;protein serine/threonine kinase activity;7.69548283526541e-05!GO:0007005;mitochondrion organization and biogenesis;8.16205677291976e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;8.16205677291976e-05!GO:0015399;primary active transmembrane transporter activity;8.16205677291976e-05!GO:0016044;membrane organization and biogenesis;8.1835826874979e-05!GO:0065004;protein-DNA complex assembly;8.36680499506888e-05!GO:0048518;positive regulation of biological process;9.6272185676514e-05!GO:0005694;chromosome;9.6272185676514e-05!GO:0005769;early endosome;0.000100511537843069!GO:0008270;zinc ion binding;0.000105764781887791!GO:0003729;mRNA binding;0.000108680604205331!GO:0031902;late endosome membrane;0.000117667314716777!GO:0030695;GTPase regulator activity;0.000123104464217045!GO:0008654;phospholipid biosynthetic process;0.000127925119822046!GO:0003714;transcription corepressor activity;0.00013648265937771!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00013648265937771!GO:0044431;Golgi apparatus part;0.000141442659908448!GO:0006612;protein targeting to membrane;0.000144932055751396!GO:0007034;vacuolar transport;0.000151379905244477!GO:0016363;nuclear matrix;0.000151698063163085!GO:0031982;vesicle;0.000153891857016103!GO:0032940;secretion by cell;0.000159502957581608!GO:0005885;Arp2/3 protein complex;0.000171756823742969!GO:0051427;hormone receptor binding;0.000185724890996031!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000188815596394843!GO:0009109;coenzyme catabolic process;0.000196776096167425!GO:0043087;regulation of GTPase activity;0.000207823565478566!GO:0008186;RNA-dependent ATPase activity;0.000227406424894047!GO:0005667;transcription factor complex;0.000241508229245466!GO:0008234;cysteine-type peptidase activity;0.000245316096264003!GO:0003690;double-stranded DNA binding;0.000265364753003757!GO:0006818;hydrogen transport;0.000289090374124364!GO:0009117;nucleotide metabolic process;0.000293068786422056!GO:0032561;guanyl ribonucleotide binding;0.000297038303048083!GO:0019001;guanyl nucleotide binding;0.000297038303048083!GO:0006260;DNA replication;0.000303813788593398!GO:0046822;regulation of nucleocytoplasmic transport;0.000310074145155508!GO:0005813;centrosome;0.000312986924791787!GO:0035257;nuclear hormone receptor binding;0.000320638962786206!GO:0015992;proton transport;0.000354740258593113!GO:0032774;RNA biosynthetic process;0.000409876508068058!GO:0000785;chromatin;0.000432494021848017!GO:0006351;transcription, DNA-dependent;0.000444515114175261!GO:0046914;transition metal ion binding;0.000448614853371425!GO:0044262;cellular carbohydrate metabolic process;0.000540399427162352!GO:0043021;ribonucleoprotein binding;0.000560273549481194!GO:0045449;regulation of transcription;0.000581140516751058!GO:0022890;inorganic cation transmembrane transporter activity;0.000587414011524983!GO:0043623;cellular protein complex assembly;0.00059865975681988!GO:0031410;cytoplasmic vesicle;0.000660100971051137!GO:0004004;ATP-dependent RNA helicase activity;0.000677490295851504!GO:0007265;Ras protein signal transduction;0.000715197040321821!GO:0005083;small GTPase regulator activity;0.000819280986669827!GO:0009607;response to biotic stimulus;0.000860957977462511!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.000891618934165167!GO:0008632;apoptotic program;0.000915745292993294!GO:0031988;membrane-bound vesicle;0.00107724131205089!GO:0007041;lysosomal transport;0.00112361818275765!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00115967931759025!GO:0043492;ATPase activity, coupled to movement of substances;0.00118300382110115!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00118689708678484!GO:0005815;microtubule organizing center;0.00126894992059141!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00133994661902965!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00136242069208964!GO:0006897;endocytosis;0.00138450054415042!GO:0010324;membrane invagination;0.00138450054415042!GO:0032318;regulation of Ras GTPase activity;0.00145882731876108!GO:0009966;regulation of signal transduction;0.001464196816556!GO:0044427;chromosomal part;0.001520702936597!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00157363209635033!GO:0007050;cell cycle arrest;0.00157954044092537!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00159163595311222!GO:0016251;general RNA polymerase II transcription factor activity;0.00160957363366484!GO:0006091;generation of precursor metabolites and energy;0.00164949704127272!GO:0005637;nuclear inner membrane;0.00183805634493769!GO:0005741;mitochondrial outer membrane;0.00190246199411434!GO:0003725;double-stranded RNA binding;0.00204993014439914!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00205122282660647!GO:0001726;ruffle;0.00210775258307439!GO:0015980;energy derivation by oxidation of organic compounds;0.00218248540832382!GO:0030384;phosphoinositide metabolic process;0.00218666704666695!GO:0051223;regulation of protein transport;0.00233026432862345!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00234009199819001!GO:0000139;Golgi membrane;0.00242534284915023!GO:0007040;lysosome organization and biogenesis;0.00251605419975324!GO:0001816;cytokine production;0.00262943642596735!GO:0005099;Ras GTPase activator activity;0.00263164512656356!GO:0016023;cytoplasmic membrane-bound vesicle;0.0026765182127418!GO:0045045;secretory pathway;0.0026765182127418!GO:0030258;lipid modification;0.00272954072025672!GO:0009893;positive regulation of metabolic process;0.00274897469658665!GO:0031072;heat shock protein binding;0.00284614530192402!GO:0051090;regulation of transcription factor activity;0.00305014072882782!GO:0006383;transcription from RNA polymerase III promoter;0.00347600239486703!GO:0051252;regulation of RNA metabolic process;0.00355484829425013!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00360641709088683!GO:0019843;rRNA binding;0.00374727668427464!GO:0006650;glycerophospholipid metabolic process;0.00380848390211311!GO:0030658;transport vesicle membrane;0.00381508968826302!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00381508968826302!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00381508968826302!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00381508968826302!GO:0045454;cell redox homeostasis;0.00408232031639467!GO:0006891;intra-Golgi vesicle-mediated transport;0.00414141770488958!GO:0033157;regulation of intracellular protein transport;0.00422371612464424!GO:0042306;regulation of protein import into nucleus;0.00422371612464424!GO:0000118;histone deacetylase complex;0.00427727946781739!GO:0030036;actin cytoskeleton organization and biogenesis;0.00439549085996475!GO:0006607;NLS-bearing substrate import into nucleus;0.0045077906155673!GO:0048500;signal recognition particle;0.00456415610252309!GO:0045892;negative regulation of transcription, DNA-dependent;0.00462232846454816!GO:0006611;protein export from nucleus;0.00465370966806502!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00473812681788296!GO:0031968;organelle outer membrane;0.00477852306724506!GO:0006352;transcription initiation;0.00493315584305083!GO:0006405;RNA export from nucleus;0.00493315584305083!GO:0006355;regulation of transcription, DNA-dependent;0.00502476995143452!GO:0045893;positive regulation of transcription, DNA-dependent;0.00513219182920133!GO:0031625;ubiquitin protein ligase binding;0.00513426263090021!GO:0019867;outer membrane;0.00575783479324697!GO:0043281;regulation of caspase activity;0.00599339539544744!GO:0000287;magnesium ion binding;0.00600467139578105!GO:0005788;endoplasmic reticulum lumen;0.00609563545450108!GO:0000209;protein polyubiquitination;0.00643908958423919!GO:0033116;ER-Golgi intermediate compartment membrane;0.00663240418366663!GO:0048468;cell development;0.00691135145760951!GO:0006643;membrane lipid metabolic process;0.00696366595349759!GO:0004185;serine carboxypeptidase activity;0.0070225227405367!GO:0045941;positive regulation of transcription;0.00704215841158689!GO:0030041;actin filament polymerization;0.00705012578005791!GO:0007033;vacuole organization and biogenesis;0.00705453393603511!GO:0043488;regulation of mRNA stability;0.00754050482303225!GO:0043487;regulation of RNA stability;0.00754050482303225!GO:0009165;nucleotide biosynthetic process;0.0077822216305603!GO:0045113;regulation of integrin biosynthetic process;0.0077822216305603!GO:0045112;integrin biosynthetic process;0.0077822216305603!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00798940780957543!GO:0045047;protein targeting to ER;0.00798940780957543!GO:0008312;7S RNA binding;0.00806202588870237!GO:0006261;DNA-dependent DNA replication;0.0080918675032527!GO:0006672;ceramide metabolic process;0.00814394828017026!GO:0048471;perinuclear region of cytoplasm;0.00866314198591452!GO:0002376;immune system process;0.00873937730492719!GO:0031325;positive regulation of cellular metabolic process;0.00878095553889071!GO:0046467;membrane lipid biosynthetic process;0.00882248176811028!GO:0003899;DNA-directed RNA polymerase activity;0.00887486441953548!GO:0030027;lamellipodium;0.00887486441953548!GO:0033367;protein localization in mast cell secretory granule;0.00889773620811277!GO:0033365;protein localization in organelle;0.00889773620811277!GO:0033371;T cell secretory granule organization and biogenesis;0.00889773620811277!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.00889773620811277!GO:0033375;protease localization in T cell secretory granule;0.00889773620811277!GO:0042629;mast cell granule;0.00889773620811277!GO:0033377;maintenance of protein localization in T cell secretory granule;0.00889773620811277!GO:0033364;mast cell secretory granule organization and biogenesis;0.00889773620811277!GO:0033380;granzyme B localization in T cell secretory granule;0.00889773620811277!GO:0033379;maintenance of protease localization in T cell secretory granule;0.00889773620811277!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.00889773620811277!GO:0033368;protease localization in mast cell secretory granule;0.00889773620811277!GO:0033366;protein localization in secretory granule;0.00889773620811277!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.00889773620811277!GO:0033374;protein localization in T cell secretory granule;0.00889773620811277!GO:0004177;aminopeptidase activity;0.00890214746881354!GO:0008656;caspase activator activity;0.00892003169421597!GO:0030118;clathrin coat;0.00899244298370779!GO:0030660;Golgi-associated vesicle membrane;0.0090191710866109!GO:0030134;ER to Golgi transport vesicle;0.0090191710866109!GO:0030127;COPII vesicle coat;0.0090191710866109!GO:0012507;ER to Golgi transport vesicle membrane;0.0090191710866109!GO:0046983;protein dimerization activity;0.00906806650247633!GO:0016788;hydrolase activity, acting on ester bonds;0.00930937813869987!GO:0043280;positive regulation of caspase activity;0.0093127534747036!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00998181459602444!GO:0018193;peptidyl-amino acid modification;0.00999785426425514!GO:0046489;phosphoinositide biosynthetic process;0.0100996363755837!GO:0042990;regulation of transcription factor import into nucleus;0.0100996363755837!GO:0042991;transcription factor import into nucleus;0.0100996363755837!GO:0016584;nucleosome positioning;0.0102094010507009!GO:0046474;glycerophospholipid biosynthetic process;0.0103896660709377!GO:0030663;COPI coated vesicle membrane;0.0106780514156115!GO:0030126;COPI vesicle coat;0.0106780514156115!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0108657376579289!GO:0003711;transcription elongation regulator activity;0.0110575525856918!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.011109010828325!GO:0051098;regulation of binding;0.0111972332652452!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0113693747931998!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0116202078017223!GO:0006919;caspase activation;0.0117138593811245!GO:0046966;thyroid hormone receptor binding;0.0117467584201161!GO:0046519;sphingoid metabolic process;0.0120911734333483!GO:0000278;mitotic cell cycle;0.0121202188672888!GO:0016859;cis-trans isomerase activity;0.0123598823704609!GO:0042802;identical protein binding;0.0123603809888277!GO:0019883;antigen processing and presentation of endogenous antigen;0.0126552163374332!GO:0022415;viral reproductive process;0.0126726258736147!GO:0030518;steroid hormone receptor signaling pathway;0.0127301419837566!GO:0006302;double-strand break repair;0.0127301419837566!GO:0030137;COPI-coated vesicle;0.0130689286743253!GO:0015036;disulfide oxidoreductase activity;0.0134751744622499!GO:0007259;JAK-STAT cascade;0.0135487297065689!GO:0031497;chromatin assembly;0.0137206062337093!GO:0017091;AU-rich element binding;0.0137206062337093!GO:0050779;RNA destabilization;0.0137206062337093!GO:0000289;poly(A) tail shortening;0.0137206062337093!GO:0030867;rough endoplasmic reticulum membrane;0.0137464570326108!GO:0016301;kinase activity;0.0138216484430734!GO:0022406;membrane docking;0.0138501135789007!GO:0048278;vesicle docking;0.0138501135789007!GO:0030133;transport vesicle;0.0142011309008624!GO:0006414;translational elongation;0.014364281998704!GO:0006626;protein targeting to mitochondrion;0.0144418231486688!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0145171640876977!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0145171640876977!GO:0051338;regulation of transferase activity;0.0145171640876977!GO:0043681;protein import into mitochondrion;0.0146299763315285!GO:0016791;phosphoric monoester hydrolase activity;0.0147079693105059!GO:0005762;mitochondrial large ribosomal subunit;0.015157369279355!GO:0000315;organellar large ribosomal subunit;0.015157369279355!GO:0004197;cysteine-type endopeptidase activity;0.0156642392686759!GO:0006338;chromatin remodeling;0.0157031496050263!GO:0002467;germinal center formation;0.0157031496050263!GO:0042613;MHC class II protein complex;0.0157031496050263!GO:0003746;translation elongation factor activity;0.0157733442906451!GO:0048487;beta-tubulin binding;0.0158113477455308!GO:0043433;negative regulation of transcription factor activity;0.0161028826299997!GO:0006904;vesicle docking during exocytosis;0.0161542515565828!GO:0005684;U2-dependent spliceosome;0.0162750752724349!GO:0047485;protein N-terminus binding;0.0162832105990443!GO:0019783;small conjugating protein-specific protease activity;0.0164423146039398!GO:0006376;mRNA splice site selection;0.0167934286334644!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0167934286334644!GO:0004518;nuclease activity;0.0168301683381893!GO:0004218;cathepsin S activity;0.0168301683381893!GO:0032763;regulation of mast cell cytokine production;0.0168301683381893!GO:0032762;mast cell cytokine production;0.0168301683381893!GO:0005975;carbohydrate metabolic process;0.016858946490307!GO:0031901;early endosome membrane;0.016862188578411!GO:0006334;nucleosome assembly;0.0171004469140385!GO:0016491;oxidoreductase activity;0.0174355569266687!GO:0043549;regulation of kinase activity;0.0174516758380899!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0175441538154532!GO:0046483;heterocycle metabolic process;0.0177809920455497!GO:0030521;androgen receptor signaling pathway;0.0179384652080518!GO:0051707;response to other organism;0.0180472593952972!GO:0016853;isomerase activity;0.0180472593952972!GO:0005669;transcription factor TFIID complex;0.0181001310582773!GO:0008629;induction of apoptosis by intracellular signals;0.0181215193119405!GO:0006914;autophagy;0.0182275401251567!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0186584141569376!GO:0030880;RNA polymerase complex;0.0188616276309324!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0194477830528072!GO:0005048;signal sequence binding;0.0194685674484088!GO:0051539;4 iron, 4 sulfur cluster binding;0.0196479281906192!GO:0015631;tubulin binding;0.0203095935033818!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0203095935033818!GO:0030029;actin filament-based process;0.0205310253610684!GO:0004843;ubiquitin-specific protease activity;0.0205907951221394!GO:0004722;protein serine/threonine phosphatase activity;0.0206764412885584!GO:0015630;microtubule cytoskeleton;0.0209570665976741!GO:0030149;sphingolipid catabolic process;0.0209570665976741!GO:0015923;mannosidase activity;0.0210363622400757!GO:0051101;regulation of DNA binding;0.0213591422539356!GO:0000726;non-recombinational repair;0.0218952534794532!GO:0005057;receptor signaling protein activity;0.0221295268265998!GO:0035258;steroid hormone receptor binding;0.022797851822116!GO:0008033;tRNA processing;0.0228230163647217!GO:0019377;glycolipid catabolic process;0.0229253384158437!GO:0019318;hexose metabolic process;0.0229384267529535!GO:0048002;antigen processing and presentation of peptide antigen;0.0232333878110379!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0233528086250663!GO:0016311;dephosphorylation;0.0235023822984612!GO:0008287;protein serine/threonine phosphatase complex;0.0237848870805862!GO:0033033;negative regulation of myeloid cell apoptosis;0.0237848870805862!GO:0001803;regulation of type III hypersensitivity;0.0237848870805862!GO:0032733;positive regulation of interleukin-10 production;0.0237848870805862!GO:0033025;regulation of mast cell apoptosis;0.0237848870805862!GO:0001805;positive regulation of type III hypersensitivity;0.0237848870805862!GO:0033023;mast cell homeostasis;0.0237848870805862!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0237848870805862!GO:0033032;regulation of myeloid cell apoptosis;0.0237848870805862!GO:0001802;type III hypersensitivity;0.0237848870805862!GO:0033028;myeloid cell apoptosis;0.0237848870805862!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0237848870805862!GO:0033026;negative regulation of mast cell apoptosis;0.0237848870805862!GO:0033024;mast cell apoptosis;0.0237848870805862!GO:0032386;regulation of intracellular transport;0.0250660270579768!GO:0051789;response to protein stimulus;0.0250660270579768!GO:0006986;response to unfolded protein;0.0250660270579768!GO:0006310;DNA recombination;0.0251319750767315!GO:0008139;nuclear localization sequence binding;0.0253524055870045!GO:0017166;vinculin binding;0.025713423357875!GO:0000339;RNA cap binding;0.0257235292354004!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0257352577752253!GO:0040029;regulation of gene expression, epigenetic;0.0257490379543487!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0257822945382994!GO:0016505;apoptotic protease activator activity;0.0259967670482813!GO:0005484;SNAP receptor activity;0.026319721007825!GO:0004221;ubiquitin thiolesterase activity;0.0264595134469948!GO:0006509;membrane protein ectodomain proteolysis;0.0267331135044886!GO:0033619;membrane protein proteolysis;0.0267331135044886!GO:0007006;mitochondrial membrane organization and biogenesis;0.0267631898987754!GO:0008333;endosome to lysosome transport;0.0268373848772705!GO:0000314;organellar small ribosomal subunit;0.0268373848772705!GO:0005763;mitochondrial small ribosomal subunit;0.0268373848772705!GO:0030119;AP-type membrane coat adaptor complex;0.0273962744917105!GO:0005996;monosaccharide metabolic process;0.0274501574581876!GO:0045859;regulation of protein kinase activity;0.0276475789231515!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0288243376152733!GO:0000428;DNA-directed RNA polymerase complex;0.0288243376152733!GO:0050811;GABA receptor binding;0.0289242499954707!GO:0006289;nucleotide-excision repair;0.0289734054121576!GO:0051540;metal cluster binding;0.0291102310285123!GO:0051536;iron-sulfur cluster binding;0.0291102310285123!GO:0005869;dynactin complex;0.029373383047088!GO:0051092;activation of NF-kappaB transcription factor;0.0294394537927429!GO:0006213;pyrimidine nucleoside metabolic process;0.0301996136913333!GO:0051087;chaperone binding;0.0302247651835648!GO:0051235;maintenance of localization;0.0302431494737552!GO:0008320;protein transmembrane transporter activity;0.0304198293014934!GO:0002274;myeloid leukocyte activation;0.0307257749013518!GO:0008624;induction of apoptosis by extracellular signals;0.0314646165059274!GO:0003727;single-stranded RNA binding;0.0318576296736339!GO:0051345;positive regulation of hydrolase activity;0.031916055249161!GO:0032760;positive regulation of tumor necrosis factor production;0.032026854094834!GO:0046839;phospholipid dephosphorylation;0.0320826863575789!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0323991862720163!GO:0008017;microtubule binding;0.0324354400010513!GO:0043022;ribosome binding;0.0324761531528201!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0326579647815941!GO:0006644;phospholipid metabolic process;0.0337641389511607!GO:0031647;regulation of protein stability;0.0340418584374137!GO:0001819;positive regulation of cytokine production;0.0343794478279307!GO:0045947;negative regulation of translational initiation;0.0351091560871265!GO:0003702;RNA polymerase II transcription factor activity;0.0354002819041832!GO:0001817;regulation of cytokine production;0.0356868398197525!GO:0043085;positive regulation of catalytic activity;0.0370788457870234!GO:0030131;clathrin adaptor complex;0.0383829195770345!GO:0030176;integral to endoplasmic reticulum membrane;0.0385996074937539!GO:0006516;glycoprotein catabolic process;0.0390822579836973!GO:0033673;negative regulation of kinase activity;0.0390822579836973!GO:0006469;negative regulation of protein kinase activity;0.0390822579836973!GO:0051920;peroxiredoxin activity;0.0391837875774839!GO:0022884;macromolecule transmembrane transporter activity;0.0395518062711517!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0395518062711517!GO:0004402;histone acetyltransferase activity;0.0395518062711517!GO:0004468;lysine N-acetyltransferase activity;0.0395518062711517!GO:0043621;protein self-association;0.0396858598430748!GO:0006458;'de novo' protein folding;0.0397504657229844!GO:0051084;'de novo' posttranslational protein folding;0.0397504657229844!GO:0002757;immune response-activating signal transduction;0.0398972708857107!GO:0006595;polyamine metabolic process;0.0398972708857107!GO:0008180;signalosome;0.0399479426697772!GO:0019904;protein domain specific binding;0.0404602883905431!GO:0000119;mediator complex;0.0409566977158101!GO:0046578;regulation of Ras protein signal transduction;0.0409566977158101!GO:0008637;apoptotic mitochondrial changes;0.0410403658729352!GO:0002378;immunoglobulin biosynthetic process;0.0412538391203432!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0412538391203432!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0412538391203432!GO:0043300;regulation of leukocyte degranulation;0.0414853814078955!GO:0060090;molecular adaptor activity;0.0415016927721031!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0416954947879968!GO:0000059;protein import into nucleus, docking;0.0427010470591792!GO:0005850;eukaryotic translation initiation factor 2 complex;0.0432935384555658!GO:0045792;negative regulation of cell size;0.0437928163190029!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0442504963134473!GO:0006740;NADPH regeneration;0.0447235762337293!GO:0006098;pentose-phosphate shunt;0.0447235762337293!GO:0046854;phosphoinositide phosphorylation;0.0453957943468347!GO:0043414;biopolymer methylation;0.0454861420247299!GO:0009164;nucleoside catabolic process;0.0455613480902867!GO:0004527;exonuclease activity;0.0457794002993552!GO:0045185;maintenance of protein localization;0.0463624930483699!GO:0009112;nucleobase metabolic process;0.0466988512730917!GO:0006354;RNA elongation;0.0467875054435291!GO:0006497;protein amino acid lipidation;0.0477852569496655!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0480362159527782!GO:0002819;regulation of adaptive immune response;0.0480362159527782!GO:0001891;phagocytic cup;0.0482171852416742!GO:0031124;mRNA 3'-end processing;0.0485177572299329!GO:0032640;tumor necrosis factor production;0.0488592168738947!GO:0006468;protein amino acid phosphorylation;0.0489153418163138!GO:0045603;positive regulation of endothelial cell differentiation;0.0489153418163138!GO:0008538;proteasome activator activity;0.048956005871764!GO:0016790;thiolester hydrolase activity;0.0493603634619442!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0494205862737824!GO:0046479;glycosphingolipid catabolic process;0.0494480006580282!GO:0000049;tRNA binding;0.049632511012621 | |||
|sample_id=11910 | |||
|sample_note= | |||
|sample_sex=male | |||
|sample_species=Human (Homo sapiens) | |||
|sample_strain= | |||
|sample_tissue=blood | |||
|top_motifs=NFIL3:2.68152917543;SPIB:2.47476698328;SPI1:2.2240886621;CEBPA,B_DDIT3:2.00212781963;FOXN1:1.94204515345;DMAP1_NCOR{1,2}_SMARC:1.87062343763;IRF1,2:1.79916937165;ETS1,2:1.76272738176;TLX2:1.75270932118;NANOG{mouse}:1.65692223467;ATF5_CREB3:1.64506163957;RFX2..5_RFXANK_RFXAP:1.63506262901;MAFB:1.54975757103;IRF7:1.53365702591;HLF:1.51341385495;RUNX1..3:1.51186710345;PAX2:1.47420082538;HMX1:1.45452483356;ELF1,2,4:1.3910845539;TGIF1:1.37907424846;SREBF1,2:1.34179634514;FOXA2:1.33034680374;FOXO1,3,4:1.31549431987;NFKB1_REL_RELA:1.10365411377;FOXP3:1.10213415463;RXRA_VDR{dimer}:1.02033236917;EP300:1.01066381896;HIF1A:1.00005883025;ALX1:0.898139044942;HMGA1,2:0.856389592612;CREB1:0.844437154789;ATF4:0.833559215274;NFE2L2:0.759620187082;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.740025904454;BPTF:0.708937482422;FOX{D1,D2}:0.696855694703;FOX{F1,F2,J1}:0.691641523888;HBP1_HMGB_SSRP1_UBTF:0.673667594655;NKX2-2,8:0.67318789168;NFIX:0.668158293068;FOSL2:0.628693002472;GATA4:0.589975316213;ATF2:0.584394658796;TAL1_TCF{3,4,12}:0.572215705738;CDX1,2,4:0.444011324524;FOX{I1,J2}:0.419263450271;PAX4:0.410775829365;ALX4:0.402017082905;BACH2:0.365442571452;ESRRA:0.342216067222;NFE2:0.337188163065;NANOG:0.334286611782;FOS_FOS{B,L1}_JUN{B,D}:0.314165570504;HOXA9_MEIS1:0.290694911241;STAT2,4,6:0.288091877543;JUN:0.276740316248;NR6A1:0.265289093873;GLI1..3:0.162156513237;OCT4_SOX2{dimer}:0.108788145487;POU1F1:0.0167496298802;MYB:0.0150240915901;TFCP2:-0.00244885863033;RORA:-0.00372676871181;ZBTB16:-0.0141838048957;SPZ1:-0.0160106136035;EN1,2:-0.0270321052633;NR1H4:-0.0612526008117;CUX2:-0.064120755754;ATF6:-0.0730166961701;AHR_ARNT_ARNT2:-0.0867251869738;TOPORS:-0.0984712621069;MYFfamily:-0.129853985115;HNF4A_NR2F1,2:-0.131644199641;T:-0.136348924465;SOX2:-0.142044388787;PITX1..3:-0.152301054572;NFE2L1:-0.166208578749;TFAP4:-0.171633884713;FOXD3:-0.183134048583;POU5F1:-0.189414463894;VSX1,2:-0.200764901257;GATA6:-0.213448618496;TEF:-0.215485544069;STAT1,3:-0.216688775594;PRDM1:-0.256764736229;IKZF2:-0.281598778573;BREu{core}:-0.29431780826;STAT5{A,B}:-0.327928938315;NKX3-2:-0.334074861125;ESR1:-0.351537635549;NKX6-1,2:-0.359926176273;PAX3,7:-0.366709570129;MZF1:-0.403013526887;SMAD1..7,9:-0.41229176953;PRRX1,2:-0.428896892546;HSF1,2:-0.4397034542;FOXQ1:-0.445562787901;GCM1,2:-0.446941872601;PDX1:-0.448762615356;FOXP1:-0.451906149342;NR3C1:-0.455397012694;MYOD1:-0.460038968654;AIRE:-0.4700061284;HNF1A:-0.471780324326;NHLH1,2:-0.475421002589;CRX:-0.478691458345;SRF:-0.482027552555;RXR{A,B,G}:-0.484176446025;RFX1:-0.491055290047;ELK1,4_GABP{A,B1}:-0.496667687481;HOX{A5,B5}:-0.502402684374;EBF1:-0.51065076865;RREB1:-0.511269168166;REST:-0.516992258572;MEF2{A,B,C,D}:-0.55250250714;NR5A1,2:-0.555687118304;HES1:-0.574853832626;KLF4:-0.578422076642;NFATC1..3:-0.588203990739;MTF1:-0.589416258261;ZNF148:-0.591540734948;PAX8:-0.625089006805;PPARG:-0.635498855815;PATZ1:-0.668119955179;ZNF238:-0.681106986217;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.682769521082;TFAP2{A,C}:-0.690225120023;MTE{core}:-0.697880335564;PAX1,9:-0.698680977307;NKX2-3_NKX2-5:-0.701315584875;NKX3-1:-0.727327976558;YY1:-0.742801833817;SOX5:-0.746846120377;XBP1:-0.756156291855;POU2F1..3:-0.764015024934;MED-1{core}:-0.785222976459;ZFP161:-0.810251177854;DBP:-0.82163854538;HAND1,2:-0.829967438067;SOX{8,9,10}:-0.843094602596;ZEB1:-0.851781529118;AR:-0.883871495594;ZNF423:-0.911383133382;PAX5:-0.97467149916;SP1:-0.980757199096;E2F1..5:-0.987640081189;RBPJ:-1.01673580987;ARID5B:-1.01674574961;MAZ:-1.01771610375;ZIC1..3:-1.03077372903;GZF1:-1.03520383391;ZBTB6:-1.03860662635;NKX2-1,4:-1.08864854984;GTF2I:-1.09408479628;LHX3,4:-1.095901281;SNAI1..3:-1.1054192469;LEF1_TCF7_TCF7L1,2:-1.11312645787;EVI1:-1.113243938;LMO2:-1.13764277022;NRF1:-1.15444512512;EGR1..3:-1.15663208001;TFDP1:-1.16492973435;HOX{A4,D4}:-1.17313379546;IKZF1:-1.18597790498;HOX{A6,A7,B6,B7}:-1.22231126599;PBX1:-1.24880605493;TFAP2B:-1.25391853608;PAX6:-1.2670004817;NFY{A,B,C}:-1.31405440783;TLX1..3_NFIC{dimer}:-1.31705156799;ONECUT1,2:-1.33218045314;TEAD1:-1.33300833168;HIC1:-1.3469962462;TBX4,5:-1.37705044726;ADNP_IRX_SIX_ZHX:-1.40204067632;UFEwm:-1.41862425044;TP53:-1.44849456309;GFI1B:-1.46834996164;TBP:-1.47850661987;ZNF384:-1.54862666173;MYBL2:-1.55864194466;POU3F1..4:-1.56103711173;ZNF143:-1.59179034413;FOXL1:-1.63775036479;GTF2A1,2:-1.66225056808;POU6F1:-1.67991799582;FOXM1:-1.71536648048;GFI1:-1.7296119225;SOX17:-1.78746494209;bHLH_family:-1.8286698315;CDC5L:-1.89803801215;XCPE1{core}:-2.03772045234 | |||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11910-125G2;search_select_hide=table117:FF:11910-125G2 | |||
}} | }} |
Latest revision as of 18:28, 4 June 2020
Name: | CD14+CD16- Monocytes, donor3 |
---|---|
Species: | Human (Homo sapiens) |
Library ID: | CNhs13540 |
Sample type: | primary cells |
Genomic View: | UCSC |
RefEX: | Specific genes |
FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
CAGEd-oPOSSUM: | link |
ZENBU report : | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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Download raw sequence, BAM & CTSS | ||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13540
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13540
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0945 |
10 | 10 | 0.0106 |
100 | 100 | 0.803 |
101 | 101 | 0.309 |
102 | 102 | 0.74 |
103 | 103 | 0.15 |
104 | 104 | 0.757 |
105 | 105 | 0.29 |
106 | 106 | 0.00698 |
107 | 107 | 0.419 |
108 | 108 | 0.644 |
109 | 109 | 0.163 |
11 | 11 | 0.152 |
110 | 110 | 0.362 |
111 | 111 | 0.0262 |
112 | 112 | 0.345 |
113 | 113 | 0.414 |
114 | 114 | 0.00614 |
115 | 115 | 0.121 |
116 | 116 | 0.979 |
117 | 117 | 0.0321 |
118 | 118 | 0.126 |
119 | 119 | 0.237 |
12 | 12 | 0.414 |
120 | 120 | 0.918 |
121 | 121 | 0.932 |
122 | 122 | 0.779 |
123 | 123 | 0.103 |
124 | 124 | 0.803 |
125 | 125 | 0.232 |
126 | 126 | 0.189 |
127 | 127 | 0.222 |
128 | 128 | 0.0367 |
129 | 129 | 0.655 |
13 | 13 | 0.132 |
130 | 130 | 0.216 |
131 | 131 | 0.803 |
132 | 132 | 0.0381 |
133 | 133 | 0.704 |
134 | 134 | 0.454 |
135 | 135 | 0.0485 |
136 | 136 | 0.876 |
137 | 137 | 4.51574e-5 |
138 | 138 | 0.0729 |
139 | 139 | 0.0449 |
14 | 14 | 0.32 |
140 | 140 | 0.0884 |
141 | 141 | 0.213 |
142 | 142 | 0.77 |
143 | 143 | 0.107 |
144 | 144 | 0.603 |
145 | 145 | 0.694 |
146 | 146 | 0.675 |
147 | 147 | 0.228 |
148 | 148 | 0.0093 |
149 | 149 | 0.61 |
15 | 15 | 0.102 |
150 | 150 | 0.592 |
151 | 151 | 0.366 |
152 | 152 | 0.445 |
153 | 153 | 0.608 |
154 | 154 | 0.527 |
155 | 155 | 0.199 |
156 | 156 | 0.857 |
157 | 157 | 0.548 |
158 | 158 | 0.0182 |
159 | 159 | 0.383 |
16 | 16 | 0.487 |
160 | 160 | 0.616 |
161 | 161 | 0.621 |
162 | 162 | 0.397 |
163 | 163 | 0.683 |
164 | 164 | 0.154 |
165 | 165 | 0.0447 |
166 | 166 | 0.807 |
167 | 167 | 0.174 |
168 | 168 | 0.328 |
169 | 169 | 0.0165 |
17 | 17 | 0.283 |
18 | 18 | 0.15 |
19 | 19 | 0.189 |
2 | 2 | 0.988 |
20 | 20 | 0.774 |
21 | 21 | 0.526 |
22 | 22 | 0.249 |
23 | 23 | 0.1 |
24 | 24 | 0.212 |
25 | 25 | 0.177 |
26 | 26 | 0.0471 |
27 | 27 | 0.448 |
28 | 28 | 0.352 |
29 | 29 | 0.12 |
3 | 3 | 0.092 |
30 | 30 | 0.525 |
31 | 31 | 0.648 |
32 | 32 | 0.603 |
33 | 33 | 0.221 |
34 | 34 | 0.479 |
35 | 35 | 0.116 |
36 | 36 | 0.0649 |
37 | 37 | 0.0967 |
38 | 38 | 0.435 |
39 | 39 | 0.911 |
4 | 4 | 0.947 |
40 | 40 | 0.23 |
41 | 41 | 0.0294 |
42 | 42 | 0.309 |
43 | 43 | 0.0877 |
44 | 44 | 0.927 |
45 | 45 | 0.846 |
46 | 46 | 0.161 |
47 | 47 | 0.453 |
48 | 48 | 0.472 |
49 | 49 | 0.121 |
5 | 5 | 0.1 |
50 | 50 | 0.927 |
51 | 51 | 0.364 |
52 | 52 | 0.309 |
53 | 53 | 0.262 |
54 | 54 | 0.446 |
55 | 55 | 0.391 |
56 | 56 | 0.804 |
57 | 57 | 0.721 |
58 | 58 | 0.0764 |
59 | 59 | 0.155 |
6 | 6 | 0.692 |
60 | 60 | 0.0439 |
61 | 61 | 0.218 |
62 | 62 | 0.0202 |
63 | 63 | 0.583 |
64 | 64 | 0.405 |
65 | 65 | 0.28 |
66 | 66 | 0.212 |
67 | 67 | 0.429 |
68 | 68 | 0.486 |
69 | 69 | 0.82 |
7 | 7 | 0.149 |
70 | 70 | 0.0163 |
71 | 71 | 0.0234 |
72 | 72 | 0.238 |
73 | 73 | 0.23 |
74 | 74 | 0.0208 |
75 | 75 | 0.0946 |
76 | 76 | 0.176 |
77 | 77 | 0.616 |
78 | 78 | 0.166 |
79 | 79 | 0.0273 |
8 | 8 | 0.503 |
80 | 80 | 0.157 |
81 | 81 | 0.253 |
82 | 82 | 0.123 |
83 | 83 | 0.627 |
84 | 84 | 0.998 |
85 | 85 | 0.033 |
86 | 86 | 0.0512 |
87 | 87 | 0.831 |
88 | 88 | 0.475 |
89 | 89 | 0.547 |
9 | 9 | 0.302 |
90 | 90 | 0.0152 |
91 | 91 | 0.268 |
92 | 92 | 0.241 |
93 | 93 | 0.529 |
94 | 94 | 0.0227 |
95 | 95 | 0.345 |
96 | 96 | 0.322 |
97 | 97 | 0.959 |
98 | 98 | 0.162 |
99 | 99 | 0.0155 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13540
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0011111 human CD14-positive CD16-negative Monocytes sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011111 (human CD14-positive CD16-negative Monocytes sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)