FF:12182-129A4: Difference between revisions

Latest revision as of 18:33, 4 June 2020

Name:	Whole blood (ribopure), donor090612, donation1
Species:	Human (Homo sapiens)
Library ID:	CNhs11672,RDhi10003
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	NA
age	NA
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Matched_genome_OSC(contact:Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	NA

CAGE Accession numbers

Method		Sample accession id
RNA-Seq		SAMD00013682

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs11672		CAGE		DRX008534		DRR009406
RDhi10003		RNA-Seq		DRX012356		DRR013804

Accession ID Hg19

Library id		BAM		CTSS
CNhs11672		DRZ000831		DRZ002216
RDhi10003		DRZ003005

Accession ID Hg38

Library id		BAM		CTSS
CNhs11672		DRZ012181		DRZ013566
RDhi10003

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0787
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.132
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.373
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.148
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	1.165
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.131
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.514
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.394
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0.476
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.446
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.217
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0.361
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.156
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0.512
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.144
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.217
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.363
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	1.228
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.217
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.568
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.217
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.469
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.045
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.627
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.217
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.628
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.111
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.743
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0.145
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0.217
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0.217
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.874
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0.217
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0.361
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11672

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	8.41912e-12
MA0003.1	MA0003.1	0.0358
MA0004.1	MA0004.1	0.643
MA0006.1	MA0006.1	0.507
MA0007.1	MA0007.1	0.892
MA0009.1	MA0009.1	0.0807
MA0014.1	MA0014.1	0.956
MA0017.1	MA0017.1	0.0548
MA0018.2	MA0018.2	0.245
MA0019.1	MA0019.1	0.775
MA0024.1	MA0024.1	0.00927
MA0025.1	MA0025.1	0.225
MA0027.1	MA0027.1	0.589
MA0028.1	MA0028.1	0.643
MA0029.1	MA0029.1	0.737
MA0030.1	MA0030.1	0.0271
MA0031.1	MA0031.1	3.58069e-4
MA0035.2	MA0035.2	6.34146e-4
MA0038.1	MA0038.1	0.0512
MA0039.2	MA0039.2	0.126
MA0040.1	MA0040.1	0.115
MA0041.1	MA0041.1	0.156
MA0042.1	MA0042.1	0.0693
MA0043.1	MA0043.1	0.0998
MA0046.1	MA0046.1	0.586
MA0047.2	MA0047.2	0.193
MA0048.1	MA0048.1	0.103
MA0050.1	MA0050.1	7.46691e-6
MA0051.1	MA0051.1	0.0232
MA0052.1	MA0052.1	0.0843
MA0055.1	MA0055.1	0.0372
MA0057.1	MA0057.1	0.964
MA0058.1	MA0058.1	0.628
MA0059.1	MA0059.1	0.592
MA0060.1	MA0060.1	9.2617e-4
MA0061.1	MA0061.1	0.0159
MA0062.2	MA0062.2	1.63826e-4
MA0065.2	MA0065.2	0.149
MA0066.1	MA0066.1	0.246
MA0067.1	MA0067.1	0.89
MA0068.1	MA0068.1	0.606
MA0069.1	MA0069.1	0.796
MA0070.1	MA0070.1	0.0269
MA0071.1	MA0071.1	0.55
MA0072.1	MA0072.1	0.724
MA0073.1	MA0073.1	0.266
MA0074.1	MA0074.1	0.69
MA0076.1	MA0076.1	0.198
MA0077.1	MA0077.1	0.22
MA0078.1	MA0078.1	0.914
MA0079.2	MA0079.2	0.933
MA0080.2	MA0080.2	1.18686e-17
MA0081.1	MA0081.1	0.00158
MA0083.1	MA0083.1	0.672
MA0084.1	MA0084.1	0.551
MA0087.1	MA0087.1	0.764
MA0088.1	MA0088.1	0.426
MA0090.1	MA0090.1	0.0261
MA0091.1	MA0091.1	0.416
MA0092.1	MA0092.1	0.863
MA0093.1	MA0093.1	0.502
MA0099.2	MA0099.2	0.326
MA0100.1	MA0100.1	0.975
MA0101.1	MA0101.1	0.336
MA0102.2	MA0102.2	2.38069e-6
MA0103.1	MA0103.1	0.156
MA0104.2	MA0104.2	0.565
MA0105.1	MA0105.1	1.79821e-4
MA0106.1	MA0106.1	0.591
MA0107.1	MA0107.1	0.358
MA0108.2	MA0108.2	2.56597e-4
MA0111.1	MA0111.1	0.302
MA0112.2	MA0112.2	0.00104
MA0113.1	MA0113.1	0.895
MA0114.1	MA0114.1	0.393
MA0115.1	MA0115.1	0.606
MA0116.1	MA0116.1	2.45923e-5
MA0117.1	MA0117.1	0.852
MA0119.1	MA0119.1	0.479
MA0122.1	MA0122.1	0.255
MA0124.1	MA0124.1	0.862
MA0125.1	MA0125.1	0.0429
MA0131.1	MA0131.1	0.511
MA0135.1	MA0135.1	0.324
MA0136.1	MA0136.1	1.14988e-23
MA0137.2	MA0137.2	0.0329
MA0138.2	MA0138.2	0.376
MA0139.1	MA0139.1	0.211
MA0140.1	MA0140.1	7.46312e-11
MA0141.1	MA0141.1	0.607
MA0142.1	MA0142.1	0.776
MA0143.1	MA0143.1	0.785
MA0144.1	MA0144.1	0.0457
MA0145.1	MA0145.1	0.0986
MA0146.1	MA0146.1	0.00627
MA0147.1	MA0147.1	0.497
MA0148.1	MA0148.1	0.525
MA0149.1	MA0149.1	0.536
MA0150.1	MA0150.1	0.00212
MA0152.1	MA0152.1	0.142
MA0153.1	MA0153.1	0.134
MA0154.1	MA0154.1	0.0022
MA0155.1	MA0155.1	0.601
MA0156.1	MA0156.1	5.0319e-18
MA0157.1	MA0157.1	0.00309
MA0159.1	MA0159.1	0.171
MA0160.1	MA0160.1	0.362
MA0162.1	MA0162.1	0.346
MA0163.1	MA0163.1	1.26111e-4
MA0164.1	MA0164.1	0.357
MA0258.1	MA0258.1	0.0203
MA0259.1	MA0259.1	0.299

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11672

Novel motif	Logo	P-value
1	1	0.189
10	10	0.0913
100	100	0.562
101	101	0.359
102	102	0.613
103	103	0.121
104	104	0.818
105	105	0.103
106	106	0.0483
107	107	0.772
108	108	0.785
109	109	0.0853
11	11	0.102
110	110	0.345
111	111	0.291
112	112	0.111
113	113	0.174
114	114	0.0596
115	115	0.258
116	116	1
117	117	0.0648
118	118	0.359
119	119	0.452
12	12	0.382
120	120	0.664
121	121	0.648
122	122	0.257
123	123	0.23
124	124	0.0629
125	125	0.13
126	126	0.187
127	127	0.32
128	128	0.0469
129	129	0.513
13	13	0.844
130	130	0.965
131	131	0.578
132	132	0.398
133	133	0.859
134	134	0.971
135	135	0.329
136	136	0.99
137	137	0.0055
138	138	0.0703
139	139	0.015
14	14	0.186
140	140	0.519
141	141	0.401
142	142	0.984
143	143	0.00335
144	144	0.937
145	145	0.357
146	146	0.858
147	147	0.232
148	148	0.274
149	149	0.57
15	15	0.0553
150	150	0.999
151	151	0.263
152	152	0.348
153	153	0.709
154	154	0.969
155	155	0.21
156	156	0.727
157	157	0.348
158	158	0.0888
159	159	0.3
16	16	0.454
160	160	0.618
161	161	0.459
162	162	0.574
163	163	0.332
164	164	0.282
165	165	0.127
166	166	0.9
167	167	0.783
168	168	0.0558
169	169	0.0112
17	17	0.376
18	18	0.375
19	19	0.343
2	2	0.228
20	20	0.596
21	21	0.603
22	22	0.174
23	23	0.0511
24	24	0.0707
25	25	0.156
26	26	0.137
27	27	0.0956
28	28	0.479
29	29	0.477
3	3	0.0979
30	30	0.858
31	31	0.531
32	32	0.864
33	33	0.549
34	34	0.219
35	35	0.284
36	36	0.418
37	37	0.163
38	38	0.301
39	39	0.996
4	4	0.87
40	40	0.331
41	41	0.0284
42	42	0.266
43	43	0.144
44	44	0.447
45	45	0.365
46	46	0.132
47	47	0.207
48	48	0.294
49	49	0.138
5	5	0.236
50	50	0.981
51	51	0.405
52	52	0.411
53	53	0.153
54	54	0.252
55	55	0.131
56	56	0.254
57	57	0.721
58	58	0.0565
59	59	0.0522
6	6	0.619
60	60	0.0464
61	61	0.273
62	62	0.0147
63	63	0.518
64	64	0.393
65	65	0.181
66	66	0.577
67	67	0.208
68	68	0.405
69	69	0.717
7	7	0.14
70	70	0.0642
71	71	0.114
72	72	0.208
73	73	0.351
74	74	0.822
75	75	0.131
76	76	0.649
77	77	0.644
78	78	0.369
79	79	0.978
8	8	0.501
80	80	0.00932
81	81	0.37
82	82	0.0198
83	83	0.518
84	84	0.498
85	85	0.161
86	86	0.119
87	87	0.592
88	88	0.516
89	89	0.217
9	9	0.249
90	90	0.0296
91	91	0.339
92	92	0.0719
93	93	0.206
94	94	0.0828
95	95	0.605
96	96	0.109
97	97	0.776
98	98	0.0444
99	99	0.447

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11672

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0000281 human whole blood sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000178 (blood)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000179 (haemolymphatic fluid)
0000463 (organism substance)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0010317 (germ layer / neural crest derived structure)
0002390 (hematopoietic system)
0004535 (cardiovascular system)
0002193 (hemolymphoid system)
0001009 (circulatory system)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0010053 (human blood - adult sample)
0000004 (tissue sample)
0000281 (human whole blood sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000922,UBERON:0000178,UBERON:0000926,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000480,UBERON:0000923,UBERON:0002050,UBERON:0005423,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0005291,UBERON:0006598,UBERON:0002532,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0003081,UBERON:0001009,UBERON:0006603,UBERON:0003061
+|DRA_sample_Accession=RNA-Seq@SAMD00013682
+|accession_numbers=CAGE;DRX008534;DRR009406;DRZ000831;DRZ002216;DRZ012181;DRZ013566!RNA-Seq;DRX012356;DRR013804;DRZ003005;
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000178,UBERON:0000479,UBERON:0004120,UBERON:0000061,UBERON:0000465,UBERON:0000179,UBERON:0000463,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0010317,UBERON:0002390,UBERON:0004535,UBERON:0002193,UBERON:0001009
 |ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0010053,FF:0000004,FF:0000281
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr11:47400078..47400106,-!p1@SPI1!2.82!658.85!SPI1;;chr12:54694653..54694672,-!p2@NFE2!2.76!568.06!NFE2;;chr2:68592406..68592424,+!p1@PLEK!2.65!450.04!PLEK;;chr12:54694758..54694805,-!p1@NFE2!2.41!304.78!NFE2;;chrX:131622958..131622978,-!p3@MBNL3!2.37!292.46!MBNL3;;chrX:131623026..131623039,-!p5@MBNL3!2.36!226.97!MBNL3;;chrX:131623044..131623089,-!p1@MBNL3!2.34!846.26!MBNL3;;chrX:131622988..131623006,-!p8@MBNL3!2.25!178.33!MBNL3;;chr10:51572339..51572376,+!p4@NCOA4!2.22!355.36!NCOA4;;chr12:54694807..54694832,-!p3@NFE2!2.16!142.66!NFE2;;chrX:70315688..70315709,+!p1@FOXO4!2.14!305.43!FOXO4;;chr10:51572408..51572454,+!p3@NCOA4!2.11!701.65!NCOA4;;chr19:13213511..13213545,-!p2@LYL1!2.07!125.16!LYL1;;chr2:70142232..70142251,+!p1@MXD1!2.04!582.33!MXD1;;chr7:28220506..28220552,-!p3@JAZF1!2.02!103.11!JAZF1;;chr7:28220354..28220441,-!p1@JAZF1!1.93!1223.67!JAZF1;;chr3:128212033..128212051,-!p1@GATA2!1.84!68.09!GATA2;;chr19:12998003..12998021,-!p1@KLF1!1.84!67.44!KLF1;;chr10:51585430..51585448,+!p7@NCOA4!1.81!63.55!NCOA4;;chr10:51585449..51585487,+!p6@NCOA4!1.79!60.96!NCOA4;;chr16:85932760..85932775,+!p1@IRF8!1.76!56.42!IRF8;;chr1:43148855..43148908,+!p4@YBX1!1.72!80.41!YBX1;;chr2:148778973..148779035,+!p3@MBD5!1.71!127.10!MBD5;;chr4:109087445..109087463,-!p1@LEF1!1.71!49.93!LEF1;;chr7:50344289..50344323,+!p1@IKZF1!1.69!47.99!IKZF1;;chr3:141748010..141748030,-!p8@TFDP2!1.67!45.39!TFDP2;;chr11:47400062..47400077,-!p2@SPI1!1.67!45.39!SPI1;;chr1:47697965..47697991,-!p7@TAL1!1.66!44.74!TAL1;;chr20:56195474..56195506,-!p1@ZBP1!1.66!44.74!ZBP1;;chr17:45810594..45810608,+!p1@TBX21!1.66!44.74!TBX21;;chr10:111985713..111985774,+!p2@MXI1!1.65!392.97!MXI1;;chr12:54778471..54778528,-!p1@ZNF385A!1.65!44.10!ZNF385A;;chr11:47400045..47400060,-!p6@SPI1!1.63!42.15!SPI1;;chr7:50343634..50343717,+!p2@IKZF1!1.63!42.15!IKZF1;;chr3:27763807..27763822,-!p1@EOMES!1.62!40.85!EOMES;;chr3:187463179..187463201,-!p2@BCL6!1.61!156.28!BCL6;;chr5:176735063..176735088,-!p2@MXD3!1.61!39.56!MXD3;;chr11:47399947..47399961,-!p3@SPI1!1.61!39.56!SPI1;;chr11:47399996..47400014,-!p4@SPI1!1.57!36.31!SPI1;;chr7:28725715..28725727,+!p3@CREB5!1.56!41.50!CREB5;;chr11:47400032..47400043,-!p5@SPI1!1.56!35.02!SPI1;;chr1:23857325..23857416,-!p2@E2F2!1.55!40.21!E2F2;;chr2:231090433..231090469,+!p1@SP140!1.55!34.37!SP140;;chr10:111967345..111967422,+!p1@MXI1!1.52!501.27!MXI1;;chr5:133451294..133451310,+!p2@TCF7!1.52!32.42!TCF7;;chr7:28725740..28725778,+!p1@CREB5!1.50!264.58!CREB5;;chr19:16435625..16435682,+!p1@KLF2!1.49!904.62!KLF2;;chr21:34442439..34442455,+!p1@OLIG1!1.49!29.83!OLIG1;;chr12:54694738..54694749,-!p5@NFE2!1.46!27.88!NFE2;;chr6:391743..391759,+!p1@IRF4!1.46!27.88!IRF4;;chr9:117150254..117150271,-!p1@AKNA!1.45!72.63!AKNA;;chr19:13213662..13213686,-!p1@LYL1!1.45!39.56!LYL1;;chr2:68592394..68592405,+!p2@PLEK!1.44!26.59!PLEK;;chr2:28618532..28618610,+!p4@FOSL2!1.43!44.10!FOSL2;;chrX:48644984..48645005,+!p1@GATA1!1.42!25.29!GATA1;;chr1:8484007..8484061,-!p13@RERE!1.41!31.13!RERE;;chr6:144385698..144385742,-!p2@PLAGL1!1.41!29.83!PLAGL1;;chr2:231090471..231090504,+!p2@SP140!1.41!24.64!SP140;;chr2:100759010..100759035,-!p1@AFF3!1.40!23.99!AFF3;;chr4:185395633..185395651,-!p2@IRF2!1.39!37.61!IRF2;;chr2:192015701..192015743,-!p1@STAT4!1.39!32.42!STAT4;;chr19:13213555..13213568,-!p5@LYL1!1.39!23.35!LYL1;;chr11:111249993..111250006,-!p1@POU2AF1!1.36!22.05!POU2AF1;;chr12:54691711..54691725,-!p7@NFE2!1.35!21.40!NFE2;;chr2:192015750..192015793,-!p2@STAT4!1.34!27.88!STAT4;;chr19:13213634..13213645,-!p8@LYL1!1.34!20.75!LYL1;;chr2:208031943..208031978,-!p5@KLF7!1.33!27.24!KLF7;;chr5:133450365..133450444,+!p1@TCF7!1.32!89.49!TCF7;;chr10:51565239..51565263,+!p2@NCOA4!1.31!442.26!NCOA4;;chr3:63953435..63953499,+!p1@ATXN7!1.31!19.45!ATXN7;;chr12:53835425..53835437,+!p4@PRR13,p5@PCBP2!1.30!30.48!PCBP2;;chr12:10854646..10854658,-!p24@CSDA!1.30!18.81!CSDA;;chr11:128563948..128564003,+!p1@FLI1!1.28!210.75!FLI1;;chr1:25256756..25256774,-!p1@RUNX3!1.28!33.72!RUNX3;;chr12:54689552..54689574,-!p6@NFE2!1.28!18.16!NFE2;;chr5:142782823..142782854,-!p3@NR3C1!1.27!25.29!NR3C1;;chr17:38020392..38020477,-!p1@IKZF3!1.25!16.86!IKZF3;;chr5:131826457..131826514,-!p1@IRF1!1.24!632.91!IRF1;;chr9:32550965..32551031,-!p4@TOPORS!1.24!25.29!TOPORS;;chr17:38497662..38497713,+!p4@RARA!1.24!18.81!RARA;;chr17:17721569..17721574,-!p9@SREBF1!1.24!16.21!SREBF1;;chrX:107018836..107018862,-!p8@TSC22D3!1.24!16.21!TSC22D3;;chr1:23857128..23857141,-!p6@E2F2!1.24!16.21!E2F2;;chr16:88752889..88752921,-!p1@SNAI3!1.22!18.16!SNAI3;;chr19:50922187..50922204,+!p1@SPIB!1.22!15.56!SPIB;;chr9:137217986..137218049,+!p3@RXRA!1.20!42.15!RXRA;;chr16:3313791..3313834,+!p2@ZNF263!1.20!33.07!ZNF263;;chr9:135854091..135854159,+!p1@GFI1B!1.20!14.91!GFI1B;;chr3:18486354..18486377,-!p2@SATB1!1.19!18.16!SATB1;;chr10:31288398..31288455,-!p2@ZNF438!1.19!16.86!ZNF438;;chrX:106960285..106960299,-!p1@TSC22D3!1.18!374.82!TSC22D3;;chr5:88178983..88179012,-!p1@MEF2C!1.18!107.65!MEF2C;;chr2:70142189..70142223,+!p2@MXD1!1.18!99.22!MXD1;;chr12:54694686..54694697,-!p8@NFE2!1.18!14.27!NFE2;;chr1:23857698..23857733,-!p1@E2F2!1.17!25.29!E2F2;;chr13:41593425..41593480,-!p1@ELF1!1.16!84.30!ELF1;;chrX:106960180..106960197,-!p2@TSC22D3!1.16!51.23!TSC22D3;;chr4:185395191..185395226,-!p4@IRF2!1.16!18.81!IRF2;;chr10:8096631..8096660,+!p1@GATA3!1.16!16.21!GATA3;;chr2:231084659..231084721,-!p1@SP110!1.15!302.84!SP110;;chr7:149470641..149470694,-!p1@ZNF467!1.15!59.01!ZNF467;;chr7:50343895..50343936,+!p5@IKZF1!1.15!12.97!IKZF1;;chr1:47697881..47697910,-!p4@TAL1!1.15!12.97!TAL1;;chr17:37934365..37934387,-!p2@IKZF3!1.15!12.97!IKZF3;;chr9:117160738..117160782,-!p2@AKNA!1.14!52.53!AKNA;;chr6:108881012..108881034,+!p3@FOXO3!1.14!46.04!FOXO3;;chr17:38498402..38498445,+!p3@RARA!1.14!46.04!RARA;;chr19:56879534..56879615,+!p3@ZNF542!1.14!20.10!ZNF542;;chr2:208031542..208031595,-!p2@KLF7!1.13!87.54!KLF7;;chr1:43148792..43148849,+!p2@YBX1!1.12!46.69!YBX1;;chr19:45250948..45250998,+!p3@BCL3!1.12!31.13!BCL3;;chr3:71355163..71355209,-!p5@FOXP1!1.12!16.86!FOXP1;;chr12:54689532..54689551,-!p4@NFE2!1.12!12.32!NFE2;;chr7:64126535..64126559,+!p2@ZNF107!1.11!25.29!ZNF107;;chr20:50159198..50159299,-!p1@NFATC2!1.11!17.51!NFATC2;;chr17:38498594..38498661,+!p2@RARA!1.10!38.91!RARA;;chr6:106546808..106546833,+!p3@PRDM1!1.09!14.27!PRDM1;;chr2:70167296..70167306,+!p3@MXD1!1.06!16.21!MXD1;;chr1:47695003..47695042,-!p2@TAL1!1.06!10.38!TAL1;;chr14:75745523..75745537,+!p1@FOS!1.05!1235.99!FOS;;chr3:71632840..71632857,-!p10@FOXP1!1.03!19.45!FOXP1;;chr7:115670804..115670825,-!p1@TFEC!1.03!9.73!TFEC;;chr2:145277640..145277771,-!p1@ZEB2!1.02!127.75!ZEB2;;chr19:42636586..42636607,-!p1@POU2F2!1.02!26.59!POU2F2;;chr4:185395590..185395627,-!p3@IRF2!1.02!11.67!IRF2;;chr21:30671235..30671253,+!p1@BACH1!1.01!118.67!BACH1;;chr4:106068026..106068084,+!p1@TET2!1.01!85.60!TET2;;chr6:15246200..15246214,+!p2@JARID2!1.01!25.94!JARID2;;chr21:30671211..30671234,+!p3@BACH1!1.00!44.74!BACH1;;chr19:47616992..47617011,-!p4@ZC3H4!1.00!19.45!ZC3H4;;chr8:67525443..67525459,-!p2@MYBL1!1.00!13.62!MYBL1;;chr7:50344144..50344157,+!p6@IKZF1!1.00!9.08!IKZF1;;chr7:50344251..50344288,+!p3@IKZF1!1.00!9.08!IKZF1;;chr4:57522513..57522548,-!p4@HOPX!1.00!9.08!HOPX;;chr10:31288370..31288393,-!p3@ZNF438!1.00!9.08!ZNF438;;chr11:128392273..128392308,-!p2@ETS1!0.99!38.26!ETS1;;chr3:187463220..187463232,-!p3@BCL6!0.99!27.24!BCL6;;chr7:149470540..149470596,-!p2@ZNF467!0.99!11.67!ZNF467;;chr8:71316021..71316068,-!p1@NCOA2!0.98!82.36!NCOA2;;chr2:208394817..208394834,+!p3@CREB1!0.98!35.02!CREB1;;chrX:107018969..107019024,-!p6@TSC22D3!0.97!11.67!TSC22D3;;chr19:13213704..13213726,-!p3@LYL1!0.97!11.02!LYL1;;chrX:107019163..107019179,-!p7@TSC22D3!0.97!9.73!TSC22D3;;chr4:57522166..57522260,-!p2@HOPX!0.97!9.73!HOPX;;chr2:231090344..231090361,-!p3@SP110!0.97!8.43!SP110;;chr17:38020557..38020572,-!p4@IKZF3!0.97!8.43!IKZF3;;chr12:6782377..6782382,-!p15@ZNF384!0.97!8.43!ZNF384;;chr21:34442540..34442560,+!p2@OLIG1!0.97!8.43!OLIG1;;chr6:108882109..108882173,+!p2@FOXO3!0.96!44.74!FOXO3;;chr15:60884706..60884743,-!p1@RORA!0.96!42.80!RORA;;chr14:75988771..75988826,+!p1@BATF!0.96!11.02!BATF;;chr4:38665769..38665801,+!p2@KLF3!0.95!74.57!KLF3;;chr14:69262789..69262822,-!p2@ZFP36L1!0.95!21.40!ZFP36L1;;chr10:64576105..64576133,-!p1@EGR2!0.94!16.21!EGR2;;chr12:124812308..124812313,-!p57@NCOR2!0.94!7.78!NCOR2;;chr6:106546731..106546755,+!p5@PRDM1!0.94!7.78!PRDM1;;chr19:45251395..45251432,+!p8@BCL3!0.94!7.78!BCL3;;chr9:20382446..20382493,-!p4@MLLT3!0.94!7.78!MLLT3;;chr5:140080022..140080042,+!p1@ZMAT2!0.92!412.43!ZMAT2;;chr3:187463248..187463264,-!p1@BCL6!0.92!162.77!BCL6;;chr9:88969339..88969422,-!p2@ZCCHC6!0.92!59.66!ZCCHC6;;chr19:19779619..19779670,+!p1@ZNF101!0.92!21.40!ZNF101;;chr1:221052776..221052799,+!p1@HLX!0.92!13.62!HLX;;chr12:10854595..10854628,-!p7@CSDA!0.92!10.38!CSDA;;chr12:57505121..57505179,-!p1@STAT6!0.91!291.81!STAT6;;chr17:40440481..40440550,+!p1@STAT5A!0.91!53.17!STAT5A;;chr10:8096772..8096787,+!p2@GATA3!0.91!8.43!GATA3;;chr10:111985777..111985788,+!p4@MXI1!0.91!7.13!MXI1;;chr1:151030388..151030419,+!p9@MLLT11!0.91!7.13!MLLT11;;chr1:23857087..23857100,-!p8@E2F2!0.91!7.13!E2F2;;chr1:47691303..47691319,-!p5@TAL1!0.91!7.13!TAL1;;chr4:109089901..109089930,-!p3@LEF1!0.91!7.13!LEF1;;chr14:99738059..99738086,-!p2@BCL11B!0.91!7.13!BCL11B;;chr1:156470494..156470505,-!p3@MEF2D!0.90!10.38!MEF2D;;chr4:140098339..140098392,-!p1@ELF2!0.89!59.01!ELF2;;chr6:91006518..91006570,-!p1@BACH2!0.89!16.21!BACH2;;chr9:88969303..88969335,-!p1@ZCCHC6!0.88!64.20!ZCCHC6;;chr3:71632864..71632885,-!p4@FOXP1!0.88!23.35!FOXP1;;chr6:106534192..106534224,+!p1@PRDM1!0.88!19.45!PRDM1;;chr8:37963466..37963506,+!p3@ASH2L!0.88!8.43!ASH2L;;chr6:108880956..108881011,+!p1@FOXO3!0.87!44.74!FOXO3;;chr1:158979872..158979898,+!p3@IFI16!0.87!20.75!IFI16;;chr2:231084639..231084654,-!p2@SP110!0.87!11.02!SP110;;chr2:68615063..68615089,+!p4@PLEK!0.87!6.48!PLEK;;chr3:18480217..18480239,-!p3@SATB1!0.87!6.48!SATB1;;chr4:109090075..109090095,-!p2@LEF1!0.87!6.48!LEF1;;c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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000178;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 41: @@
 |fonse_treatment_closure=
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090612%252c%2520donation1.CNhs11672.12182-129A4.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090612%252c%2520donation1.CNhs11672.12182-129A4.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090612%252c%2520donation1.CNhs11672.12182-129A4.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090612%252c%2520donation1.CNhs11672.12182-129A4.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Whole%2520blood%2520%2528ribopure%2529%252c%2520donor090612%252c%2520donation1.CNhs11672.12182-129A4.hg38.nobarcode.ctss.bed.gz
 |id=FF:12182-129A4
-|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0000281
+|is_a=EFO:0002091;;FF:0000002;;FF:0000281
+|is_obsolete=
+|library_id=CNhs11672!RDhi10003
+|library_id_phase_based=2:CNhs11672
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12182
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12182
 |name=Whole blood (ribopure), donor090612, donation1
 |namespace=FANTOM5
@@ Line 42: / Line 60: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs11672,LSID808,release008,COMPLETED
-|profile_rnaseq=RDhi10003,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
+|refex=http://refex.dbcls.jp/genelist.php?lang
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 |rna_box=129
 |rna_catalog_number=
@@ Line 57: / Line 78: @@
 |rna_weight_ug=8
 |sample_age=
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 91: @@
 |sample_ethnicity=
 |sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;8.4599568885516e-253!GO:0043227;membrane-bound organelle;5.30313853468428e-127!GO:0043231;intracellular membrane-bound organelle;8.41338864596037e-127!GO:0005737;cytoplasm;1.9290635632203e-121!GO:0043226;organelle;1.12277258789591e-120!GO:0043229;intracellular organelle;5.22387745433659e-120!GO:0044444;cytoplasmic part;1.24483570132842e-80!GO:0044422;organelle part;4.23601985801795e-69!GO:0044237;cellular metabolic process;3.97285534323975e-68!GO:0044446;intracellular organelle part;7.99688592471876e-68!GO:0043170;macromolecule metabolic process;1.34792582995072e-66!GO:0044238;primary metabolic process;1.02553961361632e-65!GO:0005515;protein binding;2.58474867322869e-62!GO:0032991;macromolecular complex;4.39467429147988e-62!GO:0005634;nucleus;1.98416622821006e-58!GO:0003723;RNA binding;1.37281722593413e-50!GO:0044428;nuclear part;4.8426574172478e-48!GO:0030529;ribonucleoprotein complex;4.21171034166276e-46!GO:0019538;protein metabolic process;1.39680920861775e-44!GO:0015031;protein transport;3.50745517796926e-42!GO:0033036;macromolecule localization;4.43038929865848e-42!GO:0044260;cellular macromolecule metabolic process;2.87446905303751e-41!GO:0044267;cellular protein metabolic process;4.2698936650311e-41!GO:0045184;establishment of protein localization;5.32984406185134e-41!GO:0043283;biopolymer metabolic process;1.28093126376144e-40!GO:0043233;organelle lumen;1.35454813846889e-39!GO:0031974;membrane-enclosed lumen;1.35454813846889e-39!GO:0008104;protein localization;3.15408136064658e-39!GO:0005829;cytosol;1.24389509983584e-35!GO:0006412;translation;1.94782369593333e-35!GO:0010467;gene expression;5.84453054844924e-35!GO:0043234;protein complex;3.01753567175641e-33!GO:0016071;mRNA metabolic process;8.86656260556782e-32!GO:0031981;nuclear lumen;2.38996699267259e-31!GO:0006396;RNA processing;5.24578139456774e-31!GO:0031090;organelle membrane;1.86842128106898e-30!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.88742856041174e-29!GO:0005739;mitochondrion;1.34088000439085e-27!GO:0008380;RNA splicing;3.39955456151433e-27!GO:0006397;mRNA processing;3.45914816168614e-27!GO:0009059;macromolecule biosynthetic process;4.47567518880022e-27!GO:0016043;cellular component organization and biogenesis;8.09543881075718e-26!GO:0046907;intracellular transport;1.98992021873789e-25!GO:0006886;intracellular protein transport;6.66724847704204e-25!GO:0012501;programmed cell death;1.43260140332049e-24!GO:0006915;apoptosis;1.51500346905735e-24!GO:0005840;ribosome;9.71281472893144e-24!GO:0008219;cell death;1.31978699604434e-23!GO:0016265;death;1.31978699604434e-23!GO:0031967;organelle envelope;1.75522284431619e-23!GO:0031975;envelope;3.27042624752676e-23!GO:0044249;cellular biosynthetic process;4.57961830282591e-23!GO:0009058;biosynthetic process;6.80407873945954e-23!GO:0005654;nucleoplasm;6.14997617972015e-22!GO:0044445;cytosolic part;1.01772266266574e-21!GO:0065003;macromolecular complex assembly;1.41655404177932e-21!GO:0003735;structural constituent of ribosome;2.5647203277896e-21!GO:0044429;mitochondrial part;2.84141944920075e-20!GO:0033279;ribosomal subunit;6.90321488566969e-20!GO:0051649;establishment of cellular localization;6.90321488566969e-20!GO:0051641;cellular localization;1.05673248145336e-19!GO:0043412;biopolymer modification;1.7604890502054e-19!GO:0022607;cellular component assembly;6.65685654206637e-19!GO:0005681;spliceosome;6.68286484647164e-19!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.78500448932991e-19!GO:0000166;nucleotide binding;8.35485666150299e-19!GO:0006512;ubiquitin cycle;2.72655908982369e-18!GO:0044451;nucleoplasm part;4.23307867695172e-18!GO:0008134;transcription factor binding;4.50811696187854e-18!GO:0006464;protein modification process;5.34580873997387e-18!GO:0002376;immune system process;5.52438654897944e-18!GO:0003676;nucleic acid binding;3.08668945626169e-17!GO:0016070;RNA metabolic process;3.49425479844504e-17!GO:0042981;regulation of apoptosis;4.30579111793205e-17!GO:0043067;regulation of programmed cell death;6.80712030832317e-17!GO:0044265;cellular macromolecule catabolic process;1.1471691883347e-16!GO:0043687;post-translational protein modification;2.01884829700668e-16!GO:0016192;vesicle-mediated transport;3.48144768938925e-16!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.744092558804e-16!GO:0006119;oxidative phosphorylation;2.50523135300395e-15!GO:0005740;mitochondrial envelope;2.84532404431073e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.35278795182167e-15!GO:0016462;pyrophosphatase activity;3.44476674389741e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;3.68458408745557e-15!GO:0017111;nucleoside-triphosphatase activity;5.64896544173997e-15!GO:0031966;mitochondrial membrane;1.29175864146305e-14!GO:0006996;organelle organization and biogenesis;1.39328388301838e-14!GO:0032553;ribonucleotide binding;1.51843158387461e-14!GO:0032555;purine ribonucleotide binding;1.51843158387461e-14!GO:0016604;nuclear body;3.69898091030377e-14!GO:0007243;protein kinase cascade;4.54123455847221e-14!GO:0006259;DNA metabolic process;4.80045392462422e-14!GO:0016874;ligase activity;4.97481708871602e-14!GO:0019866;organelle inner membrane;7.99035583110906e-14!GO:0017076;purine nucleotide binding;8.82871466281648e-14!GO:0050794;regulation of cellular process;1.2096157005153e-13!GO:0005794;Golgi apparatus;1.64020427117807e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;3.18604657117268e-13!GO:0019941;modification-dependent protein catabolic process;3.78525288196153e-13!GO:0043632;modification-dependent macromolecule catabolic process;3.78525288196153e-13!GO:0022618;protein-RNA complex assembly;5.41891881423965e-13!GO:0006511;ubiquitin-dependent protein catabolic process;6.08978226531505e-13!GO:0044257;cellular protein catabolic process;8.01469902819182e-13!GO:0043285;biopolymer catabolic process;9.41005431557351e-13!GO:0009057;macromolecule catabolic process;1.66841277083327e-12!GO:0016607;nuclear speck;2.52767364958156e-12!GO:0048770;pigment granule;2.6183378901745e-12!GO:0042470;melanosome;2.6183378901745e-12!GO:0006793;phosphorus metabolic process;2.6183378901745e-12!GO:0006796;phosphate metabolic process;2.6183378901745e-12!GO:0005768;endosome;2.68283547868953e-12!GO:0007242;intracellular signaling cascade;3.02791349230911e-12!GO:0006605;protein targeting;3.77556498255152e-12!GO:0005743;mitochondrial inner membrane;3.95764694276199e-12!GO:0051246;regulation of protein metabolic process;4.19633110986085e-12!GO:0006955;immune response;4.82080152970604e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.78269381827272e-12!GO:0006913;nucleocytoplasmic transport;6.91042930506617e-12!GO:0012505;endomembrane system;7.20668611176771e-12!GO:0044248;cellular catabolic process;9.86649101372206e-12!GO:0051169;nuclear transport;1.34387851692692e-11!GO:0003712;transcription cofactor activity;2.39996465733199e-11!GO:0016310;phosphorylation;2.60095742357644e-11!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.94250699518157e-11!GO:0015934;large ribosomal subunit;3.94067601383075e-11!GO:0043069;negative regulation of programmed cell death;6.54345435565006e-11!GO:0005524;ATP binding;9.1754768013883e-11!GO:0043066;negative regulation of apoptosis;1.00922977057831e-10!GO:0032559;adenyl ribonucleotide binding;1.50496940370857e-10!GO:0050789;regulation of biological process;1.63931365865998e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;1.77294056867549e-10!GO:0051186;cofactor metabolic process;1.86941564540155e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;1.87154874647391e-10!GO:0000375;RNA splicing, via transesterification reactions;1.87154874647391e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.87154874647391e-10!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.40098404615087e-10!GO:0006916;anti-apoptosis;2.82573381864791e-10!GO:0008135;translation factor activity, nucleic acid binding;3.9330824688685e-10!GO:0005773;vacuole;5.69504380892694e-10!GO:0006457;protein folding;8.81860833613136e-10!GO:0030554;adenyl nucleotide binding;8.98740247817105e-10!GO:0065009;regulation of a molecular function;9.01894135533662e-10!GO:0048193;Golgi vesicle transport;9.02279240925874e-10!GO:0048523;negative regulation of cellular process;1.37710720565208e-09!GO:0000502;proteasome complex (sensu Eukaryota);1.48952147915477e-09!GO:0015935;small ribosomal subunit;1.68549242454663e-09!GO:0019787;small conjugating protein ligase activity;1.8746831587703e-09!GO:0008639;small protein conjugating enzyme activity;1.99635518713435e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.31544847277802e-09!GO:0030163;protein catabolic process;2.53435238793653e-09!GO:0019222;regulation of metabolic process;2.699597461728e-09!GO:0004842;ubiquitin-protein ligase activity;4.01756895000121e-09!GO:0005635;nuclear envelope;4.31737764007339e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;5.1021516734272e-09!GO:0044455;mitochondrial membrane part;5.98911847602731e-09!GO:0000323;lytic vacuole;6.68633906759749e-09!GO:0005764;lysosome;6.68633906759749e-09!GO:0065007;biological regulation;6.88387372500312e-09!GO:0006366;transcription from RNA polymerase II promoter;7.40841774379049e-09!GO:0006446;regulation of translational initiation;7.48393638585884e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.45417610076797e-09!GO:0005730;nucleolus;1.00079098261242e-08!GO:0005770;late endosome;1.05405106621771e-08!GO:0006950;response to stress;1.42804972101846e-08!GO:0003713;transcription coactivator activity;1.42899949099693e-08!GO:0016887;ATPase activity;1.48711259009288e-08!GO:0043228;non-membrane-bound organelle;1.77705218161221e-08!GO:0043232;intracellular non-membrane-bound organelle;1.77705218161221e-08!GO:0006323;DNA packaging;1.79459542333307e-08!GO:0005746;mitochondrial respiratory chain;1.90948411336263e-08!GO:0016568;chromatin modification;2.52037724353586e-08!GO:0019829;cation-transporting ATPase activity;3.10573097357091e-08!GO:0003743;translation initiation factor activity;3.14124678166408e-08!GO:0006413;translational initiation;3.66075399297913e-08!GO:0050136;NADH dehydrogenase (quinone) activity;3.74381247461698e-08!GO:0003954;NADH dehydrogenase activity;3.74381247461698e-08!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.74381247461698e-08!GO:0019899;enzyme binding;3.98836615291802e-08!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;4.35883782705741e-08!GO:0048519;negative regulation of biological process;4.38613765736724e-08!GO:0009259;ribonucleotide metabolic process;5.00531760502158e-08!GO:0016787;hydrolase activity;5.46141597975381e-08!GO:0042623;ATPase activity, coupled;6.16154378488155e-08!GO:0009150;purine ribonucleotide metabolic process;6.28617421614169e-08!GO:0044440;endosomal part;6.79464281553488e-08!GO:0010008;endosome membrane;6.79464281553488e-08!GO:0006417;regulation of translation;8.17713185038468e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.7218044761117e-08!GO:0016881;acid-amino acid ligase activity;1.45515543522468e-07!GO:0006163;purine nucleotide metabolic process;1.45515543522468e-07!GO:0015986;ATP synthesis coupled proton transport;1.69548891331762e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.69548891331762e-07!GO:0031980;mitochondrial lumen;1.72665141955754e-07!GO:0005759;mitochondrial matrix;1.72665141955754e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.76487358610478e-07!GO:0042775;organelle ATP synthesis coupled electron transport;1.78062252273372e-07!GO:0042773;ATP synthesis coupled electron transport;1.78062252273372e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.85292072574522e-07!GO:0043065;positive regulation of apoptosis;1.8549002601036e-07!GO:0031965;nuclear membrane;2.15223495769539e-07!GO:0045321;leukocyte activation;2.5275732759481e-07!GO:0009152;purine ribonucleotide biosynthetic process;2.78936205964531e-07!GO:0017038;protein import;3.1270607185721e-07!GO:0043068;positive regulation of programmed cell death;3.17876832445026e-07!GO:0007264;small GTPase mediated signal transduction;3.61750504257231e-07!GO:0006732;coenzyme metabolic process;3.98326066923712e-07!GO:0009615;response to virus;4.20059522771375e-07!GO:0030964;NADH dehydrogenase complex (quinone);4.52700308046818e-07!GO:0045271;respiratory chain complex I;4.52700308046818e-07!GO:0005747;mitochondrial respiratory chain complex I;4.52700308046818e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;5.42250867537794e-07!GO:0009144;purine nucleoside triphosphate metabolic process;5.42250867537794e-07!GO:0003924;GTPase activity;5.47370570784446e-07!GO:0009199;ribonucleoside triphosphate metabolic process;5.77968932474717e-07!GO:0016563;transcription activator activity;5.99445980027682e-07!GO:0009260;ribonucleotide biosynthetic process;6.16508842702672e-07!GO:0006164;purine nucleotide biosynthetic process;6.45908346020695e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;6.84292806046456e-07!GO:0006917;induction of apoptosis;6.86819158311033e-07!GO:0046034;ATP metabolic process;7.17067948928705e-07!GO:0031323;regulation of cellular metabolic process;7.31796106898601e-07!GO:0051082;unfolded protein binding;7.97325933239261e-07!GO:0005783;endoplasmic reticulum;8.3122623574302e-07!GO:0031326;regulation of cellular biosynthetic process;8.92191428193935e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;9.2607283635802e-07!GO:0051170;nuclear import;9.59149527200287e-07!GO:0050790;regulation of catalytic activity;1.02704032644899e-06!GO:0012502;induction of programmed cell death;1.11020325798667e-06!GO:0006606;protein import into nucleus;1.31950413444773e-06!GO:0048522;positive regulation of cellular process;1.38489777357407e-06!GO:0006974;response to DNA damage stimulus;1.38489777357407e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.40612186060086e-06!GO:0001775;cell activation;1.42483813628443e-06!GO:0006461;protein complex assembly;1.47165943917068e-06!GO:0051276;chromosome organization and biogenesis;1.61009321941318e-06!GO:0009056;catabolic process;1.63511187130527e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.65801484086703e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.65801484086703e-06!GO:0009141;nucleoside triphosphate metabolic process;1.67613360059684e-06!GO:0006754;ATP biosynthetic process;1.72414438748739e-06!GO:0006753;nucleoside phosphate metabolic process;1.72414438748739e-06!GO:0005525;GTP binding;1.77082577483605e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.78092264829542e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.78092264829542e-06!GO:0060090;molecular adaptor activity;1.82255059722489e-06!GO:0009967;positive regulation of signal transduction;2.09404594819542e-06!GO:0005774;vacuolar membrane;2.35295408632824e-06!GO:0043566;structure-specific DNA binding;2.41018665994774e-06!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.70417844812588e-06!GO:0051188;cofactor biosynthetic process;2.71707226123932e-06!GO:0046649;lymphocyte activation;2.79300697252537e-06!GO:0002764;immune response-regulating signal transduction;2.92813723371599e-06!GO:0008565;protein transporter activity;3.08552355684394e-06!GO:0009889;regulation of biosynthetic process;3.90404775678623e-06!GO:0048518;positive regulation of biological process;4.37908186422215e-06!GO:0044453;nuclear membrane part;4.46909989257232e-06!GO:0008047;enzyme activator activity;4.80276493820302e-06!GO:0007049;cell cycle;4.90830819925139e-06!GO:0005793;ER-Golgi intermediate compartment;5.01420901161547e-06!GO:0032446;protein modification by small protein conjugation;5.02814493696914e-06!GO:0008026;ATP-dependent helicase activity;5.02814493696914e-06!GO:0030097;hemopoiesis;5.04069487109853e-06!GO:0044431;Golgi apparatus part;5.77628244680301e-06!GO:0002757;immune response-activating signal transduction;5.9136614939845e-06!GO:0050657;nucleic acid transport;6.83035537600175e-06!GO:0051236;establishment of RNA localization;6.83035537600175e-06!GO:0050658;RNA transport;6.83035537600175e-06!GO:0015078;hydrogen ion transmembrane transporter activity;7.39724403551419e-06!GO:0005765;lysosomal membrane;8.81319047231162e-06!GO:0006403;RNA localization;9.55046047321325e-06!GO:0044437;vacuolar part;1.00576236597889e-05!GO:0004386;helicase activity;1.00866732015844e-05!GO:0008632;apoptotic program;1.01887280761805e-05!GO:0048475;coated membrane;1.02908675622788e-05!GO:0030117;membrane coat;1.02908675622788e-05!GO:0016567;protein ubiquitination;1.28502894722665e-05!GO:0031902;late endosome membrane;1.28917227327604e-05!GO:0002768;immune response-regulating cell surface receptor signaling pathway;1.3331709436349e-05!GO:0032561;guanyl ribonucleotide binding;1.40630368438611e-05!GO:0019001;guanyl nucleotide binding;1.40630368438611e-05!GO:0010468;regulation of gene expression;1.8241800574031e-05!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.85493274638583e-05!GO:0030218;erythrocyte differentiation;1.97251078254391e-05!GO:0007265;Ras protein signal transduction;2.04606848385068e-05!GO:0001772;immunological synapse;2.31130637087896e-05!GO:0000074;regulation of progression through cell cycle;2.31390783625087e-05!GO:0051726;regulation of cell cycle;2.46712143828813e-05!GO:0030120;vesicle coat;2.55335881627258e-05!GO:0030662;coated vesicle membrane;2.55335881627258e-05!GO:0002429;immune response-activating cell surface receptor signaling pathway;2.66783559500472e-05!GO:0004674;protein serine/threonine kinase activity;3.11578053282455e-05!GO:0000151;ubiquitin ligase complex;3.26610865207489e-05!GO:0009117;nucleotide metabolic process;3.41294068724563e-05!GO:0042110;T cell activation;3.41294068724563e-05!GO:0031252;leading edge;3.66816990259798e-05!GO:0002520;immune system development;3.98426376459855e-05!GO:0005839;proteasome core complex (sensu Eukaryota);4.09804245496446e-05!GO:0031324;negative regulation of cellular metabolic process;4.30968226066279e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.55578658277727e-05!GO:0006613;cotranslational protein targeting to membrane;4.70864502356376e-05!GO:0003697;single-stranded DNA binding;4.93263089535654e-05!GO:0045786;negative regulation of progression through cell cycle;4.97315167835715e-05!GO:0016197;endosome transport;5.21548469899365e-05!GO:0051336;regulation of hydrolase activity;5.9306540325495e-05!GO:0006333;chromatin assembly or disassembly;5.93402824495867e-05!GO:0016564;transcription repressor activity;6.30914395392242e-05!GO:0000245;spliceosome assembly;6.48072945467737e-05!GO:0005070;SH3/SH2 adaptor activity;7.00768400143145e-05!GO:0044432;endoplasmic reticulum part;7.08576041222988e-05!GO:0051028;mRNA transport;7.21008401141838e-05!GO:0065004;protein-DNA complex assembly;7.31756090708501e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;7.36219871857433e-05!GO:0006281;DNA repair;7.43871954651887e-05!GO:0005643;nuclear pore;8.07888778679301e-05!GO:0030695;GTPase regulator activity;8.43091797778173e-05!GO:0016740;transferase activity;8.48594582230248e-05!GO:0009892;negative regulation of metabolic process;8.89468775768818e-05!GO:0006888;ER to Golgi vesicle-mediated transport;9.19969555697969e-05!GO:0045259;proton-transporting ATP synthase complex;9.27801710901995e-05!GO:0032940;secretion by cell;9.42648286244414e-05!GO:0051168;nuclear export;9.52732307299054e-05!GO:0006401;RNA catabolic process;0.000107556254020233!GO:0009055;electron carrier activity;0.000117108480305982!GO:0031982;vesicle;0.000118188424495437!GO:0006350;transcription;0.000130744850876367!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000145571259833808!GO:0009607;response to biotic stimulus;0.000146927583423541!GO:0004298;threonine endopeptidase activity;0.00015125471730107!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000152662765725323!GO:0015399;primary active transmembrane transporter activity;0.000152662765725323!GO:0006752;group transfer coenzyme metabolic process;0.000162880921468984!GO:0030532;small nuclear ribonucleoprotein complex;0.000163510848781315!GO:0000139;Golgi membrane;0.00018356652516138!GO:0016044;membrane organization and biogenesis;0.000185102105911624!GO:0042254;ribosome biogenesis and assembly;0.000185102105911624!GO:0030099;myeloid cell differentiation;0.000185349698379275!GO:0009108;coenzyme biosynthetic process;0.000188830871296439!GO:0009060;aerobic respiration;0.000202945712985135!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000224252851059586!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000226580055634414!GO:0043492;ATPase activity, coupled to movement of substances;0.000228973723421791!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000231584140019818!GO:0003724;RNA helicase activity;0.000232748646766852!GO:0018193;peptidyl-amino acid modification;0.00024363790736934!GO:0016481;negative regulation of transcription;0.00024363790736934!GO:0005789;endoplasmic reticulum membrane;0.00026783029818796!GO:0009966;regulation of signal transduction;0.000271297174481488!GO:0048534;hemopoietic or lymphoid organ development;0.00027712151193376!GO:0008270;zinc ion binding;0.00030548398298167!GO:0051251;positive regulation of lymphocyte activation;0.000308650852061546!GO:0005798;Golgi-associated vesicle;0.000336924343862434!GO:0005057;receptor signaling protein activity;0.000340481236205765!GO:0005096;GTPase activator activity;0.000340843210608726!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000342411115598559!GO:0005885;Arp2/3 protein complex;0.000345305477837258!GO:0006612;protein targeting to membrane;0.00035051954157953!GO:0046930;pore complex;0.00038176205504159!GO:0006650;glycerophospholipid metabolic process;0.000386899569930355!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000393492860134321!GO:0050851;antigen receptor-mediated signaling pathway;0.000452429563890995!GO:0005761;mitochondrial ribosome;0.000453386582707767!GO:0000313;organellar ribosome;0.000453386582707767!GO:0046914;transition metal ion binding;0.000465662176554735!GO:0048468;cell development;0.000466908193350182!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000468610563605185!GO:0008654;phospholipid biosynthetic process;0.000486415786829842!GO:0031410;cytoplasmic vesicle;0.000509789126477146!GO:0045045;secretory pathway;0.000537120206350199!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000562294461161183!GO:0006402;mRNA catabolic process;0.000596215987634675!GO:0016301;kinase activity;0.000670556764708343!GO:0042101;T cell receptor complex;0.000791347939454237!GO:0005083;small GTPase regulator activity;0.000810902149811208!GO:0030036;actin cytoskeleton organization and biogenesis;0.000840621590420865!GO:0031988;membrane-bound vesicle;0.000873453070073289!GO:0005769;early endosome;0.000874818794096857!GO:0006099;tricarboxylic acid cycle;0.000884829050752844!GO:0046356;acetyl-CoA catabolic process;0.000884829050752844!GO:0001816;cytokine production;0.000908016056951468!GO:0045333;cellular respiration;0.000911944660906366!GO:0030384;phosphoinositide metabolic process;0.000953650653358504!GO:0009719;response to endogenous stimulus;0.00100016679081983!GO:0015992;proton transport;0.0010549230562613!GO:0043087;regulation of GTPase activity;0.0010549230562613!GO:0006818;hydrogen transport;0.00109040255103252!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00112173305874814!GO:0006468;protein amino acid phosphorylation;0.00112173305874814!GO:0003714;transcription corepressor activity;0.00124576714780257!GO:0000785;chromatin;0.00131195271884983!GO:0042113;B cell activation;0.00143003117504322!GO:0001726;ruffle;0.00149937303992348!GO:0016779;nucleotidyltransferase activity;0.00160028003983467!GO:0065002;intracellular protein transport across a membrane;0.00160491832637841!GO:0007034;vacuolar transport;0.00165351517511903!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00166809146409178!GO:0004812;aminoacyl-tRNA ligase activity;0.00166809146409178!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00166809146409178!GO:0022402;cell cycle process;0.0017546684479781!GO:0008234;cysteine-type peptidase activity;0.00178779616287937!GO:0030041;actin filament polymerization;0.00187807089805396!GO:0016023;cytoplasmic membrane-bound vesicle;0.00197462048177755!GO:0006891;intra-Golgi vesicle-mediated transport;0.00212960301588236!GO:0016363;nuclear matrix;0.00220681386071195!GO:0008186;RNA-dependent ATPase activity;0.00221122262519829!GO:0046822;regulation of nucleocytoplasmic transport;0.00228665521153343!GO:0006611;protein export from nucleus;0.00231278136477552!GO:0051427;hormone receptor binding;0.00231278136477552!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00248519557320273!GO:0030118;clathrin coat;0.00250115202646693!GO:0007050;cell cycle arrest;0.00250284514713839!GO:0043038;amino acid activation;0.0027008632660555!GO:0006418;tRNA aminoacylation for protein translation;0.0027008632660555!GO:0043039;tRNA aminoacylation;0.0027008632660555!GO:0005741;mitochondrial outer membrane;0.00277202606549859!GO:0005667;transcription factor complex;0.00277343048569885!GO:0003729;mRNA binding;0.002788422640422!GO:0051187;cofactor catabolic process;0.00284536778161121!GO:0022890;inorganic cation transmembrane transporter activity;0.00285381206606221!GO:0045449;regulation of transcription;0.0028757301295647!GO:0006084;acetyl-CoA metabolic process;0.00288257300599099!GO:0003690;double-stranded DNA binding;0.00293776339922554!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.00294021573461374!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.0030052923990644!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00302422199546851!GO:0008637;apoptotic mitochondrial changes;0.00336240966282268!GO:0003725;double-stranded RNA binding;0.00353494170823271!GO:0008154;actin polymerization and/or depolymerization;0.00362504447205678!GO:0006919;caspase activation;0.00362504447205678!GO:0006643;membrane lipid metabolic process;0.00363887334276344!GO:0030658;transport vesicle membrane;0.00383584316427553!GO:0035257;nuclear hormone receptor binding;0.00387731454003066!GO:0048471;perinuclear region of cytoplasm;0.00399336978316394!GO:0032774;RNA biosynthetic process;0.00402379679225749!GO:0016072;rRNA metabolic process;0.00403525688723927!GO:0005694;chromosome;0.00410424958715053!GO:0006351;transcription, DNA-dependent;0.00412677199734971!GO:0005813;centrosome;0.00414434055944535!GO:0002252;immune effector process;0.00417206834765682!GO:0051090;regulation of transcription factor activity;0.00417206834765682!GO:0050871;positive regulation of B cell activation;0.00417206834765682!GO:0009109;coenzyme catabolic process;0.00417206834765682!GO:0006399;tRNA metabolic process;0.00429471797808657!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00434396969743914!GO:0043281;regulation of caspase activity;0.00463452188601636!GO:0008624;induction of apoptosis by extracellular signals;0.00477433350716927!GO:0051707;response to other organism;0.00490312442078441!GO:0016791;phosphoric monoester hydrolase activity;0.0049645960856425!GO:0048250;mitochondrial iron ion transport;0.00503392473143914!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00515579990734716!GO:0051092;activation of NF-kappaB transcription factor;0.00532013455890482!GO:0006364;rRNA processing;0.00532013455890482!GO:0019867;outer membrane;0.00561143119642969!GO:0004004;ATP-dependent RNA helicase activity;0.00579658651239041!GO:0002443;leukocyte mediated immunity;0.00614204568556687!GO:0002521;leukocyte differentiation;0.00614204568556687!GO:0051252;regulation of RNA metabolic process;0.00618602397924149!GO:0022415;viral reproductive process;0.00624798435489053!GO:0031968;organelle outer membrane;0.00628458611282949!GO:0019904;protein domain specific binding;0.00629836649896231!GO:0006897;endocytosis;0.00631197458422798!GO:0010324;membrane invagination;0.00631197458422798!GO:0043623;cellular protein complex assembly;0.00646205203609951!GO:0007005;mitochondrion organization and biogenesis;0.00659627851734765!GO:0031901;early endosome membrane;0.00720881275395343!GO:0030867;rough endoplasmic reticulum membrane;0.00721543762275216!GO:0030029;actin filament-based process;0.00723941470378054!GO:0007259;JAK-STAT cascade;0.00729270778778156!GO:0043021;ribonucleoprotein binding;0.00735337819928512!GO:0019221;cytokine and chemokine mediated signaling pathway;0.00736408372712392!GO:0002274;myeloid leukocyte activation;0.00737746711728706!GO:0050870;positive regulation of T cell activation;0.00741597560899066!GO:0043280;positive regulation of caspase activity;0.00744923546975833!GO:0030133;transport vesicle;0.00748320863383522!GO:0005637;nuclear inner membrane;0.0077123280798445!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.00785279176334364!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00792358010182677!GO:0030518;steroid hormone receptor signaling pathway;0.0080611916900292!GO:0050811;GABA receptor binding;0.00807945931303004!GO:0043506;regulation of JNK activity;0.00812778710906337!GO:0016505;apoptotic protease activator activity;0.00812778710906337!GO:0048500;signal recognition particle;0.00826948689367776!GO:0009893;positive regulation of metabolic process;0.00826948689367776!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00826948689367776!GO:0045576;mast cell activation;0.0083148515450887!GO:0051223;regulation of protein transport;0.00834895110868564!GO:0045892;negative regulation of transcription, DNA-dependent;0.00835456644313032!GO:0045454;cell redox homeostasis;0.0083789550470888!GO:0001819;positive regulation of cytokine production;0.00867432514509631!GO:0044262;cellular carbohydrate metabolic process;0.00873937540535584!GO:0044427;chromosomal part;0.00892788851438803!GO:0004722;protein serine/threonine phosphatase activity;0.00902514133879752!GO:0046474;glycerophospholipid biosynthetic process;0.00914095116616397!GO:0030521;androgen receptor signaling pathway;0.00918536928364651!GO:0042168;heme metabolic process;0.00935415857547257!GO:0030660;Golgi-associated vesicle membrane;0.0094997545108816!GO:0042802;identical protein binding;0.00979012561357986!GO:0030119;AP-type membrane coat adaptor complex;0.0103368911016438!GO:0007041;lysosomal transport;0.0103467126479075!GO:0051338;regulation of transferase activity;0.0103467126479075!GO:0043299;leukocyte degranulation;0.0105334653267179!GO:0032318;regulation of Ras GTPase activity;0.0107269470682915!GO:0043549;regulation of kinase activity;0.0109254832007808!GO:0004185;serine carboxypeptidase activity;0.0110113812463225!GO:0031497;chromatin assembly;0.0112934632963154!GO:0005815;microtubule organizing center;0.0113908475699256!GO:0002440;production of molecular mediator of immune response;0.0113908475699256!GO:0048487;beta-tubulin binding;0.0115429423947654!GO:0050865;regulation of cell activation;0.0117193445221531!GO:0006783;heme biosynthetic process;0.0117200393609653!GO:0019883;antigen processing and presentation of endogenous antigen;0.011798721251823!GO:0001516;prostaglandin biosynthetic process;0.0118147481953175!GO:0046457;prostanoid biosynthetic process;0.0118147481953175!GO:0030131;clathrin adaptor complex;0.0120578078912819!GO:0006644;phospholipid metabolic process;0.0122072983249066!GO:0006778;porphyrin metabolic process;0.0122072983249066!GO:0033013;tetrapyrrole metabolic process;0.0122072983249066!GO:0051920;peroxiredoxin activity;0.0123527351358289!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.012506685409561!GO:0046489;phosphoinositide biosynthetic process;0.0125077451228456!GO:0051249;regulation of lymphocyte activation;0.0125444165216101!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0129823669227611!GO:0001836;release of cytochrome c from mitochondria;0.0131339146154264!GO:0031072;heat shock protein binding;0.0132035536381886!GO:0033116;ER-Golgi intermediate compartment membrane;0.013658512539992!GO:0006914;autophagy;0.013833744580398!GO:0019901;protein kinase binding;0.0138846066313944!GO:0042287;MHC protein binding;0.0140745635140513!GO:0008287;protein serine/threonine phosphatase complex;0.0141777625444745!GO:0006334;nucleosome assembly;0.014222745373545!GO:0031625;ubiquitin protein ligase binding;0.0142790834463541!GO:0043085;positive regulation of catalytic activity;0.0142975191948572!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.0145119987205584!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.0145119987205584!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.0145119987205584!GO:0043300;regulation of leukocyte degranulation;0.0149696468069518!GO:0006968;cellular defense response;0.0150362904247464!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0151375134806539!GO:0045047;protein targeting to ER;0.0151375134806539!GO:0005521;lamin binding;0.0153511237434226!GO:0043488;regulation of mRNA stability;0.0155894984280164!GO:0043487;regulation of RNA stability;0.0155894984280164!GO:0006352;transcription initiation;0.0158323568675908!GO:0008656;caspase activator activity;0.0160169460220665!GO:0005791;rough endoplasmic reticulum;0.0161371555044254!GO:0046467;membrane lipid biosynthetic process;0.0161504279299595!GO:0005099;Ras GTPase activator activity;0.0162781309634277!GO:0051049;regulation of transport;0.0164184065604385!GO:0006355;regulation of transcription, DNA-dependent;0.0170242553059447!GO:0006779;porphyrin biosynthetic process;0.0170242553059447!GO:0033014;tetrapyrrole biosynthetic process;0.0170242553059447!GO:0006607;NLS-bearing substrate import into nucleus;0.0172278810202887!GO:0030258;lipid modification;0.0177367024840164!GO:0000287;magnesium ion binding;0.0181345262401109!GO:0006740;NADPH regeneration;0.018258912835878!GO:0006098;pentose-phosphate shunt;0.018258912835878!GO:0043235;receptor complex;0.0186989425233657!GO:0045859;regulation of protein kinase activity;0.0188211141153094!GO:0051789;response to protein stimulus;0.0189740571179893!GO:0006986;response to unfolded protein;0.0189740571179893!GO:0033157;regulation of intracellular protein transport;0.0192939660079118!GO:0042306;regulation of protein import into nucleus;0.0192939660079118!GO:0043028;caspase regulator activity;0.0195655099865143!GO:0009165;nucleotide biosynthetic process;0.0200231432558865!GO:0051091;positive regulation of transcription factor activity;0.0203285211522736!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0203594374566267!GO:0048821;erythrocyte development;0.0208733481607302!GO:0030522;intracellular receptor-mediated signaling pathway;0.0211798122952137!GO:0006595;polyamine metabolic process;0.0211817107757721!GO:0030674;protein binding, bridging;0.021386533963601!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0214325583230707!GO:0002819;regulation of adaptive immune response;0.0214325583230707!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0216534599670568!GO:0004177;aminopeptidase activity;0.0218989078366943!GO:0006260;DNA replication;0.0222787218803416!GO:0042613;MHC class II protein complex;0.0225945677912618!GO:0006672;ceramide metabolic process;0.0229035153620831!GO:0000118;histone deacetylase complex;0.0230141553869977!GO:0015631;tubulin binding;0.0230474442053908!GO:0046979;TAP2 binding;0.0240694234896259!GO:0046977;TAP binding;0.0240694234896259!GO:0046978;TAP1 binding;0.0240694234896259!GO:0008312;7S RNA binding;0.0242687289911432!GO:0002444;myeloid leukocyte mediated immunity;0.0242914480099947!GO:0019079;viral genome replication;0.0243864933456517!GO:0030027;lamellipodium;0.0243864933456517!GO:0051098;regulation of binding;0.024646842643262!GO:0005484;SNAP receptor activity;0.024646842643262!GO:0050853;B cell receptor signaling pathway;0.0248294806269361!GO:0002218;activation of innate immune response;0.024889539616683!GO:0002758;innate immune response-activating signal transduction;0.024889539616683!GO:0045058;T cell selection;0.024919911605775!GO:0002448;mast cell mediated immunity;0.0250786190871255!GO:0043303;mast cell degranulation;0.0250786190871255!GO:0002682;regulation of immune system process;0.0257182625944775!GO:0019864;IgG binding;0.0257216299380059!GO:0045653;negative regulation of megakaryocyte differentiation;0.0260357847951964!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0260755242290765!GO:0019318;hexose metabolic process;0.0265233818021528!GO:0051345;positive regulation of hydrolase activity;0.0266019802638465!GO:0002467;germinal center formation;0.0266303587414052!GO:0006007;glucose catabolic process;0.026794743857337!GO:0051881;regulation of mitochondrial membrane potential;0.0269275723419369!GO:0016853;isomerase activity;0.0270219669475393!GO:0046983;protein dimerization activity;0.027470207288615!GO:0001817;regulation of cytokine production;0.0275629627375433!GO:0015923;mannosidase activity;0.0283174405718867!GO:0048872;homeostasis of number of cells;0.0286502634623223!GO:0017166;vinculin binding;0.0289880779736326!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0291113394878821!GO:0006376;mRNA splice site selection;0.0292455481801843!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0292455481801843!GO:0019900;kinase binding;0.0295732830809384!GO:0030125;clathrin vesicle coat;0.0306820460509682!GO:0030665;clathrin coated vesicle membrane;0.0306820460509682!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0306820460509682!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0306820460509682!GO:0050727;regulation of inflammatory response;0.0306820460509682!GO:0031347;regulation of defense response;0.0306820460509682!GO:0033367;protein localization in mast cell secretory granule;0.0306820460509682!GO:0033365;protein localization in organelle;0.0306820460509682!GO:0033371;T cell secretory granule organization and biogenesis;0.0306820460509682!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0306820460509682!GO:0033375;protease localization in T cell secretory granule;0.0306820460509682!GO:0042629;mast cell granule;0.0306820460509682!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0306820460509682!GO:0033364;mast cell secretory granule organization and biogenesis;0.0306820460509682!GO:0033380;granzyme B localization in T cell secretory granule;0.0306820460509682!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0306820460509682!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0306820460509682!GO:0033368;protease localization in mast cell secretory granule;0.0306820460509682!GO:0033366;protein localization in secretory granule;0.0306820460509682!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0306820460509682!GO:0033374;protein localization in T cell secretory granule;0.0306820460509682!GO:0019955;cytokine binding;0.0306882759151925!GO:0030100;regulation of endocytosis;0.0306882759151925!GO:0000209;protein polyubiquitination;0.0308989671474427!GO:0046519;sphingoid metabolic process;0.0311932835657637!GO:0030098;lymphocyte differentiation;0.0316579325321539!GO:0022406;membrane docking;0.031666729159247!GO:0048278;vesicle docking;0.031666729159247!GO:0002253;activation of immune response;0.0319344987509018!GO:0006954;inflammatory response;0.0319987862376566!GO:0005996;monosaccharide metabolic process;0.0321234113504142!GO:0048002;antigen processing and presentation of peptide antigen;0.0324978979366818!GO:0006213;pyrimidine nucleoside metabolic process;0.0325399921471425!GO:0005048;signal sequence binding;0.0325399921471425!GO:0016251;general RNA polymerase II transcription factor activity;0.033067763161457!GO:0006952;defense response;0.0330929000073855!GO:0043507;positive regulation of JNK activity;0.0332339109725057!GO:0046456;icosanoid biosynthetic process;0.0337416217526875!GO:0002449;lymphocyte mediated immunity;0.0338227340806114!GO:0045893;positive regulation of transcription, DNA-dependent;0.0340658371971723!GO:0016504;protease activator activity;0.0341452842910273!GO:0032763;regulation of mast cell cytokine production;0.0343959653874224!GO:0032762;mast cell cytokine production;0.0343959653874224!GO:0006904;vesicle docking during exocytosis;0.0344474129736127!GO:0050681;androgen receptor binding;0.0345471950431639!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.034816334735212!GO:0008017;microtubule binding;0.034816334735212!GO:0030132;clathrin coat of coated pit;0.034816334735212!GO:0015036;disulfide oxidoreductase activity;0.0352330763886322!GO:0004672;protein kinase activity;0.0354804665575425!GO:0050863;regulation of T cell activation;0.0354804665575425!GO:0045309;protein phosphorylated amino acid binding;0.0355144834082319!GO:0051050;positive regulation of transport;0.0355879659826409!GO:0035258;steroid hormone receptor binding;0.0357576326916661!GO:0006414;translational elongation;0.0361335436771842!GO:0043304;regulation of mast cell degranulation;0.0361795178276893!GO:0030217;T cell differentiation;0.0362020790699484!GO:0016584;nucleosome positioning;0.0366156011893131!GO:0030176;integral to endoplasmic reticulum membrane;0.036806386318889!GO:0006497;protein amino acid lipidation;0.0368878987727507!GO:0016311;dephosphorylation;0.0369540825806537!GO:0001776;leukocyte homeostasis;0.0371355321755723!GO:0031294;lymphocyte costimulation;0.0382437937041584!GO:0031295;T cell costimulation;0.0382437937041584!GO:0000303;response to superoxide;0.0382482395844518!GO:0019210;kinase inhibitor activity;0.0384355551089524!GO:0006516;glycoprotein catabolic process;0.038555616826669!GO:0008383;manganese superoxide dismutase activity;0.0386236567232042!GO:0001315;age-dependent response to reactive oxygen species;0.0386236567232042!GO:0004718;Janus kinase activity;0.0386515321498462!GO:0019220;regulation of phosphate metabolic process;0.0390296719821141!GO:0051174;regulation of phosphorus metabolic process;0.0390296719821141!GO:0031098;stress-activated protein kinase signaling pathway;0.0390822636807055!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0390973538761646!GO:0002250;adaptive immune response;0.0391257008487992!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.0391257008487992!GO:0030127;COPII vesicle coat;0.0391257008487992!GO:0012507;ER to Golgi transport vesicle membrane;0.0391257008487992!GO:0008333;endosome to lysosome transport;0.0391414657263104!GO:0032760;positive regulation of tumor necrosis factor production;0.0392849849577552!GO:0042288;MHC class I protein binding;0.039875377267772!GO:0004197;cysteine-type endopeptidase activity;0.0399428722302496!GO:0019865;immunoglobulin binding;0.0401396333295102!GO:0006405;RNA export from nucleus;0.040677580961841!GO:0042990;regulation of transcription factor import into nucleus;0.040677580961841!GO:0042991;transcription factor import into nucleus;0.040677580961841!GO:0016788;hydrolase activity, acting on ester bonds;0.040746736757365!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0409476600242586!GO:0005684;U2-dependent spliceosome;0.0412901683342364!GO:0047485;protein N-terminus binding;0.0416146694320906!GO:0042108;positive regulation of cytokine biosynthetic process;0.0421343329245561!GO:0031325;positive regulation of cellular metabolic process;0.0424554162207994!GO:0030663;COPI coated vesicle membrane;0.0424599676661957!GO:0030126;COPI vesicle coat;0.0424599676661957!GO:0046578;regulation of Ras protein signal transduction;0.0431075942380542!GO:0030137;COPI-coated vesicle;0.0431075942380542!GO:0050776;regulation of immune response;0.0431075942380542!GO:0004860;protein kinase inhibitor activity;0.0431075942380542!GO:0030134;ER to Golgi transport vesicle;0.0432514377654837!GO:0008286;insulin receptor signaling pathway;0.0436262774468428!GO:0045941;positive regulation of transcription;0.0438498730404029!GO:0017091;AU-rich element binding;0.0442362087319932!GO:0050779;RNA destabilization;0.0442362087319932!GO:0000289;poly(A) tail shortening;0.0442362087319932!GO:0019843;rRNA binding;0.0443608775409207!GO:0006338;chromatin remodeling;0.0444063529537664!GO:0032640;tumor necrosis factor production;0.0444063529537664!GO:0004982;N-formyl peptide receptor activity;0.0450955757191423!GO:0030693;caspase activity;0.0455291834680362!GO:0002377;immunoglobulin production;0.0457889289612116!GO:0005669;transcription factor TFIID complex;0.0466813026165063!GO:0001784;phosphotyrosine binding;0.0467344042317817!GO:0002224;toll-like receptor signaling pathway;0.0472474384381506!GO:0002221;pattern recognition receptor signaling pathway;0.0472474384381506!GO:0000305;response to oxygen radical;0.0474323898160785!GO:0009897;external side of plasma membrane;0.0475764186534837!GO:0031461;cullin-RING ubiquitin ligase complex;0.0478525936895436!GO:0003746;translation elongation factor activity;0.0484304068525068!GO:0019058;viral infectious cycle;0.0486495464074477!GO:0006383;transcription from RNA polymerase III promoter;0.0489935283102037!GO:0042608;T cell receptor binding;0.0492406515191804!GO:0019783;small conjugating protein-specific protease activity;0.0499051571701326
 |sample_id=12182
 |sample_note=
@@ Line 76: / Line 99: @@
 |sample_tissue=blood
 |top_motifs=GATA6:3.69827070413;ETS1,2:2.56663268115;SPI1:2.54037766143;SPIB:2.47721001512;FOXO1,3,4:2.46134004306;ELF1,2,4:2.19542326258;FOX{D1,D2}:2.06513782894;RUNX1..3:1.96312023247;SPZ1:1.96067589421;DMAP1_NCOR{1,2}_SMARC:1.88574610271;T:1.83854832212;STAT1,3:1.79903364146;EP300:1.61305447651;CEBPA,B_DDIT3:1.57029963469;STAT5{A,B}:1.54471361273;FOXD3:1.53160293704;FOX{F1,F2,J1}:1.49198466518;IRF7:1.41051092171;FOXP3:1.35951217636;PAX3,7:1.30498099867;NANOG{mouse}:1.25352599756;FOXN1:1.22290667938;TFAP4:1.14988250836;FOX{I1,J2}:1.14754433036;TLX2:1.09182023882;ZNF148:1.04403555611;POU5F1:1.01506536215;IRF1,2:1.00661175176;NFE2L2:0.983998687196;PAX2:0.927196603228;RXRA_VDR{dimer}:0.921024799314;TGIF1:0.880000685985;RBPJ:0.845776103478;ZNF423:0.844366501262;NFATC1..3:0.811953373175;TFCP2:0.727416090624;IKZF2:0.641394974493;NKX3-2:0.62661443327;NFIL3:0.6138194972;POU2F1..3:0.610478446844;NFIX:0.5913785063;STAT2,4,6:0.564939528806;SMAD1..7,9:0.560782778854;HLF:0.551917893195;HMX1:0.546007475982;ZEB1:0.533617724345;MYFfamily:0.522663070619;NR1H4:0.504309856307;SREBF1,2:0.474308458268;MYOD1:0.45055265826;BPTF:0.412539868868;NR6A1:0.40127686932;TOPORS:0.38437351319;HBP1_HMGB_SSRP1_UBTF:0.334123740894;RREB1:0.313112132327;GATA4:0.312525983688;CDX1,2,4:0.309910339686;ATF5_CREB3:0.301088196717;RFX2..5_RFXANK_RFXAP:0.239609191073;TAL1_TCF{3,4,12}:0.232055970259;NFE2L1:0.231252520717;ALX1:0.226354950983;NFE2:0.220564549037;NFKB1_REL_RELA:0.209486676448;SRF:0.209197687034;MZF1:0.197306647764;NKX3-1:0.185705674033;HOXA9_MEIS1:0.174323533834;CREB1:0.156730550843;BREu{core}:0.135912439128;PDX1:0.114026741196;MAZ:0.110997668452;RORA:0.0876785752046;FOXA2:0.0833119759516;ZNF238:0.0811360988847;LMO2:0.0494130769344;PPARG:0.0436001337247;SNAI1..3:0.0194841299121;CUX2:0.0091134407689;EVI1:-0.0374074256605;MYB:-0.0409491739606;NKX2-2,8:-0.0843476352516;MAFB:-0.118206367967;GLI1..3:-0.172490237898;REST:-0.173281658069;NKX2-1,4:-0.196772418567;POU1F1:-0.218655811744;SP1:-0.23469832494;FOXP1:-0.243121169488;BACH2:-0.309075942987;PAX4:-0.323762582708;OCT4_SOX2{dimer}:-0.329507920318;LEF1_TCF7_TCF7L1,2:-0.33133960185;XCPE1{core}:-0.33251275258;FOSL2:-0.38119169038;ATF2:-0.390919731874;ESR1:-0.391141198576;CRX:-0.403123172755;ALX4:-0.417860502298;DBP:-0.425374068464;ELK1,4_GABP{A,B1}:-0.429736496967;RFX1:-0.439794225619;JUN:-0.469645024563;ZFP161:-0.506851680609;FOS_FOS{B,L1}_JUN{B,D}:-0.507172483094;PRDM1:-0.517243236181;PITX1..3:-0.530852658683;NHLH1,2:-0.542060882797;ADNP_IRX_SIX_ZHX:-0.55004845934;AIRE:-0.557055191181;MEF2{A,B,C,D}:-0.578967808569;NR5A1,2:-0.584047203889;VSX1,2:-0.595968159162;PBX1:-0.604280731352;ATF4:-0.641417688238;NR3C1:-0.657244336924;HNF4A_NR2F1,2:-0.662699159207;ZBTB16:-0.663351669218;MTE{core}:-0.691767987868;TFAP2{A,C}:-0.718241161938;KLF4:-0.721557153138;HIF1A:-0.735082732209;HNF1A:-0.749489738365;PRRX1,2:-0.755345858247;FOXQ1:-0.755829265146;NRF1:-0.797929407339;POU6F1:-0.810175911399;GTF2I:-0.821241936781;PATZ1:-0.840012652366;PAX5:-0.848845404808;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.852835075041;FOXL1:-0.853416371069;NFY{A,B,C}:-0.862695911155;EN1,2:-0.877019952436;AR:-0.89117577318;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.910957760054;ZNF143:-0.921180565845;TFAP2B:-0.971023208008;NKX6-1,2:-0.995306874447;HIC1:-0.996247560379;SOX2:-1.01029774702;PAX8:-1.01779732167;MED-1{core}:-1.02496847997;MTF1:-1.02792753249;EGR1..3:-1.03897303192;TBX4,5:-1.04500898152;NKX2-3_NKX2-5:-1.0804844524;GZF1:-1.08198497344;ARID5B:-1.09084214342;RXR{A,B,G}:-1.10517529156;XBP1:-1.11188693507;HMGA1,2:-1.12152096175;TBP:-1.12775935179;SOX5:-1.16842671919;TLX1..3_NFIC{dimer}:-1.18628446115;ATF6:-1.21465837576;SOX{8,9,10}:-1.27739645257;PAX6:-1.27787636326;NANOG:-1.29589750394;YY1:-1.33032093069;LHX3,4:-1.34350756253;EBF1:-1.35716122379;E2F1..5:-1.36702685626;AHR_ARNT_ARNT2:-1.39160217785;MYBL2:-1.39789634167;GFI1:-1.46511475043;TP53:-1.49680664567;GCM1,2:-1.5333452977;HOX{A6,A7,B6,B7}:-1.57329606164;UFEwm:-1.59347972468;ZIC1..3:-1.60905016721;HOX{A4,D4}:-1.634352628;TEAD1:-1.65531575735;GFI1B:-1.66190706776;GTF2A1,2:-1.70614236199;ZBTB6:-1.73909529112;ESRRA:-1.76063282561;HES1:-1.86147283755;bHLH_family:-1.93525722579;FOXM1:-1.95563028573;HSF1,2:-1.99725551436;POU3F1..4:-2.00787258884;HAND1,2:-2.02496606749;ONECUT1,2:-2.0588916936;PAX1,9:-2.08557192812;HOX{A5,B5}:-2.17166213097;SOX17:-2.18127182542;CDC5L:-2.25068263654;TFDP1:-2.27798069466;ZNF384:-2.37241303206;TEF:-2.48715230231;IKZF1:-2.92537273705
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12182-129A4;search_select_hide=table117:FF:12182-129A4
 }}

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FF:12182-129A4: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:33, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0